gnu: Add r-affixcan.
* gnu/packages/bioconductor.scm (r-affixcan): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>master
parent
43dc50a5c7
commit
851770312f
|
@ -1741,6 +1741,34 @@ annotated to, splits into two subclasses are computed and a significance of
|
|||
the supporting gene set is determined.")
|
||||
(license license:gpl2+)))
|
||||
|
||||
(define-public r-affixcan
|
||||
(package
|
||||
(name "r-affixcan")
|
||||
(version "1.12.0")
|
||||
(source (origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "AffiXcan" version))
|
||||
(sha256
|
||||
(base32
|
||||
"06yn87briv2141jqad934gg5rcd90w5nghrgmbhqnmwafn72gj9d"))))
|
||||
(properties `((upstream-name . "AffiXcan")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-biocparallel
|
||||
r-crayon
|
||||
r-multiassayexperiment
|
||||
r-summarizedexperiment))
|
||||
(native-inputs (list r-knitr))
|
||||
(home-page "https://bioconductor.org/packages/AffiXcan")
|
||||
(synopsis "Functional approach to impute genetically regulated expression")
|
||||
(description
|
||||
"The @code{AffiXcan} package imputes a @dfn{genetically regulated
|
||||
expression} (GReX) for a set of genes in a sample of individuals, using a
|
||||
method based on the @dfn{total binding affinity} (TBA). Statistical models to
|
||||
impute GReX can be trained with a training dataset where the real total
|
||||
expression values are known.")
|
||||
(license license:gpl3)))
|
||||
|
||||
(define-public r-aneufinder
|
||||
(package
|
||||
(name "r-aneufinder")
|
||||
|
|
Reference in New Issue