gnu: Add r-decomplexdisease.
* gnu/packages/bioconductor.scm (r-decomplexdisease): New variable.
parent
41461b6e22
commit
a8631c816d
|
@ -3220,6 +3220,39 @@ reveals feature associations to hidden subclasses not exclusively related to
|
|||
higher deregulation levels.")
|
||||
(license license:gpl3+)))
|
||||
|
||||
(define-public r-decomplexdisease
|
||||
(package
|
||||
(name "r-decomplexdisease")
|
||||
(version "1.16.0")
|
||||
(source (origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "DEComplexDisease" version))
|
||||
(sha256
|
||||
(base32
|
||||
"09a967x1rnv7byjwh29ngjhs67rgg27zblmlzx6pyqlwy5jsp89d"))))
|
||||
(properties `((upstream-name . "DEComplexDisease")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-biocparallel
|
||||
r-complexheatmap
|
||||
r-deseq2
|
||||
r-edger
|
||||
r-rcpp
|
||||
r-summarizedexperiment))
|
||||
(native-inputs (list r-knitr))
|
||||
(home-page "https://bioconductor.org/packages/DEComplexDisease")
|
||||
(synopsis "Investigations of complex diseases by bi-clustering analysis")
|
||||
(description
|
||||
"DEComplexDisease is designed to find the @acronym{DEGs, Differential
|
||||
Expressed Genes} for complex disease, which is characterized by the
|
||||
heterogeneous genomic expression profiles. Different from the established DEG
|
||||
analysis tools, it does not assume the patients of complex diseases to share
|
||||
the common DEGs. By applying a bi-clustering algorithm, DEComplexDisease
|
||||
finds the DEGs shared by as many patients. Applying the DEComplexDisease
|
||||
analysis results, users are possible to find the patients affected by the same
|
||||
mechanism based on the shared signatures.")
|
||||
(license license:gpl3)))
|
||||
|
||||
(define-public r-deconvr
|
||||
(package
|
||||
(name "r-deconvr")
|
||||
|
|
Reference in New Issue