me
/
guix
Archived
1
0
Fork 0
Code

gnu: tabixpp: Use build tools specific to the target. 

* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Set CC and CXX in
#:make-flags. In the build-libraries phase, use cxx-for-target instead of g++
and ar-for-target instead of ar.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
master
Arun Isaac 2022-04-26 18:16:33 +05:30 committed by Efraim Flashner
parent a990547952
commit cbda00c499
No known key found for this signature in database
GPG Key ID: 41AAE7DCCA3D8351
1 changed files with 6 additions and 3 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

9
gnu/packages/bioinformatics.scm
View File

@ -14298,7 +14298,9 @@ mutations from scRNA-Seq data.")
(inputs (inputs
(list htslib zlib)) (list htslib zlib))
(arguments (arguments
(list #:make-flags #~(list "HTS_HEADERS=" (list #:make-flags #~(list (string-append "CC=" #$(cc-for-target))
(string-append "CXX=" #$(cxx-for-target))
"HTS_HEADERS="
(string-append "HTS_LIB=" (string-append "HTS_LIB="
(search-input-file %build-inputs (search-input-file %build-inputs
"/lib/libhts.a")) "/lib/libhts.a"))
@ -14310,8 +14312,9 @@ mutations from scRNA-Seq data.")
;; Build shared and static libraries. ;; Build shared and static libraries.
(add-after 'build 'build-libraries (add-after 'build 'build-libraries
(lambda* (#:key inputs #:allow-other-keys) (lambda* (#:key inputs #:allow-other-keys)
(invoke "g++" "-shared" "-o" "libtabixpp.so" "tabix.o" "-lhts") (invoke #$(cxx-for-target)
(invoke "ar" "rcs" "libtabixpp.a" "tabix.o"))) "-shared" "-o" "libtabixpp.so" "tabix.o" "-lhts")
(invoke #$(ar-for-target) "rcs" "libtabixpp.a" "tabix.o")))
(replace 'install (replace 'install
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out")) (let* ((out (assoc-ref outputs "out"))