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gnu: python-umap-learn: Patch for sklearn/numpy compatibility. 

* gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Add phase
'numpy-compatibility.
master
Ricardo Wurmus 2023-04-26 18:34:46 +02:00
parent 5bfce83dc4
commit e86851ccb3
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gnu/packages/machine-learning.scm
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@ -3131,6 +3131,18 @@ These include a barrier, broadcast, and allreduce.")
(list (list
#:phases #:phases
#~(modify-phases %standard-phases #~(modify-phases %standard-phases
(add-after 'unpack 'numpy-compatibility
(lambda _
(substitute* "umap/tests/test_umap_metrics.py"
;; See commit a714b59bd9e2ca2e63312bc3491b2b037a42f2f2
(("sparse_binary_data.todense\\(\\),")
"np.asarray(sparse_binary_data.todense()),")
;; See commit c7d05683325589ad432a55e109cacb9d631cfaa9
(("sparse_spatial_data.todense\\(\\),")
"np.asarray(sparse_spatial_data.todense()),"))
;; See commit 949abd082524fce8c45dfb147bcd8e8ef49eade3
(substitute* "umap/tests/test_umap_ops.py"
(("np.random,") "None,"))))
;; Numba needs a writable dir to cache functions. ;; Numba needs a writable dir to cache functions.
(add-before 'check 'set-numba-cache-dir (add-before 'check 'set-numba-cache-dir
(lambda _ (lambda _