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gnu: Add r-trajectoryutils.

* gnu/packages/bioconductor.scm (r-trajectoryutils): New variable.
master
Ricardo Wurmus 2021-06-05 01:47:08 +02:00
parent ce99b4da63
commit efefb2be3a
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@ -4157,6 +4157,36 @@ purposes. The package also contains legacy support for early single-end,
ungapped alignment formats.")
(license license:artistic2.0)))
(define-public r-trajectoryutils
(package
(name "r-trajectoryutils")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "TrajectoryUtils" version))
(sha256
(base32
"1b7mg3ypp1ay98cav47h9vn692lx0n9b5b0hpansgnkr5prb823b"))))
(properties
`((upstream-name . "TrajectoryUtils")))
(build-system r-build-system)
(propagated-inputs
`(("r-igraph" ,r-igraph)
("r-matrix" ,r-matrix)
("r-s4vectors" ,r-s4vectors)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(native-inputs `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/TrajectoryUtils")
(synopsis "Single-cell trajectory analysis utilities")
(description
"This package implements low-level utilities for single-cell trajectory
analysis, primarily intended for re-use inside higher-level packages. It
includes a function to create a cluster-level minimum spanning tree and data
structures to hold pseudotime inference results.")
(license license:gpl3)))
(define-public r-slingshot
(package
(name "r-slingshot")