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97425 Commits (0c26c8da9d9bb86bfbe8fe9a52ba7b2ba9c6e3ec)

Author SHA1 Message Date
Ricardo Wurmus 0c26c8da9d
gnu: pigx-rnaseq: Fix build.
* gnu/packages/bioinformatics.scm (pigx-rnaseq)[arguments]: Add phase 'patch-knitr.
2022-06-01 10:46:00 +02:00
Tobias Geerinckx-Rice 1600d5cd3a
gnu: gnome-commander: Update to 1.14.2.
* gnu/packages/gnome.scm (gnome-commander): Update to 1.14.2.
2022-05-29 02:00:27 +02:00
Tobias Geerinckx-Rice 6c345a2465
gnu: angband: Update to 4.2.4.
* gnu/packages/games.scm (angband): Update to 4.2.4.
[arguments]: Don't explicitly return #t from phases.
2022-05-29 02:00:26 +02:00
Tobias Geerinckx-Rice a01cc9f97f
gnu: freeipmi: Update to 1.6.9.
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.6.9.
2022-05-29 02:00:26 +02:00
Tobias Geerinckx-Rice 22f56dda8e
import: minetest: Fix typo.
* guix/import/minetest.scm (important-dependencies): Fix ‘choosen’ typo.
2022-05-29 02:00:07 +02:00
Tobias Geerinckx-Rice a3ea97976b
gnu: corefreq: Update to 1.90.1.
* gnu/packages/linux.scm (corefreq): Update to 1.90.1.
2022-05-29 02:00:06 +02:00
Tobias Geerinckx-Rice dc6d92ac93
bash completion: Fix & unify option parsing.
We now correctly recognise ‘guix -Abcdef’ as equivalent to ‘guix -f’.

* etc/completion/bash/guix (_guix_is_short_option, guix_is_long_option):
New functions.
(_guix_is_dash_f, _guix_is_dash_l, _guix_is_dash_L, _guix_is_dash_m)
(_guix_is_dash_C, _guix_is_dash_p): Use them.
2022-05-29 02:00:20 +02:00
Tobias Geerinckx-Rice 4cb6994790
gnu: services: Update setuid service description.
* gnu/services.scm (setuid-program-service-type)[description]:
Remove ‘root’, add ‘setgid’.
2022-05-29 02:00:19 +02:00
Tobias Geerinckx-Rice 4ac15e44e5
gnu: libfprint: Update to 1.94.4.
* gnu/packages/freedesktop.scm (libfprint): Update to 1.94.4.
2022-05-29 02:00:19 +02:00
Tobias Geerinckx-Rice 72b2412add
gnu: fprintd: Update to 1.94.2.
* gnu/packages/freedesktop.scm (fprintd): Update to 1.94.2.
2022-05-29 02:00:01 +02:00
Tobias Geerinckx-Rice 78879b10c2
gnu: fprintd: Remove input labels.
* gnu/packages/freedesktop.scm (fprintd)[native-inputs]:
Remove input labels.
2022-05-29 02:00:01 +02:00
Tobias Geerinckx-Rice eded213cbc
gnu: fprintd: Fix build.
* gnu/packages/freedesktop.scm (fprintd)[native-inputs]: Add python.
2022-05-29 02:00:01 +02:00
Tobias Geerinckx-Rice 5610778266
gnu: beancount: Update to 2.3.5.
* gnu/packages/finance.scm (beancount): Update to 2.3.5.
2022-05-29 02:00:01 +02:00
Tobias Geerinckx-Rice c6c32ab966
gnu: caf: Update to 0.18.6.
* gnu/packages/cpp.scm (caf): Update to 0.18.6.
2022-05-29 02:00:00 +02:00
Tobias Geerinckx-Rice 3f4850f0ae
gnu: quazip: Update to 1.3.
* gnu/packages/compression.scm (quazip): Update to 1.3.
2022-05-29 02:00:00 +02:00
Tobias Geerinckx-Rice bc95e0c8d6
gnu: foomatic-filters: Use project home page.
* gnu/packages/cups.scm (foomatic-filters)[home-page]: Point upstream.
2022-05-29 02:00:00 +02:00
Ricardo Wurmus b279e778ab
gnu: Add sylamer.
* gnu/packages/bioinformatics.scm (sylamer): New variable.
2022-06-01 00:17:05 +02:00
Leo Famulari 95792a26c3
gnu: linux-libre 5.10: Update to 5.10.119.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.119.
(linux-libre-5.10-pristine-source): Update hash.
2022-05-31 18:04:02 -04:00
Leo Famulari da30df085e
gnu: linux-libre 5.15: Update to 5.15.44.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.44.
(linux-libre-5.15-pristine-source): Update hash.
2022-05-31 18:04:02 -04:00
Leo Famulari cae7ed2aed
gnu: linux-libre: Update to 5.17.12.
* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.12.
(linux-libre-5.17-pristine-source): Update hash.
2022-05-31 18:03:58 -04:00
Ricardo Wurmus c4e03f8204
gnu: Add r-gsalib.
* gnu/packages/cran.scm (r-gsalib): New variable.
2022-05-31 23:43:37 +02:00
Ricardo Wurmus 6d8a3aa9c9
gnu: Add glibc-locales-2.32.
* gnu/packages/base.scm (glibc-locales-2.32): New variable.
2022-05-31 22:32:17 +02:00
Ricardo Wurmus 16ff4bc024
gnu: Add glibc-locales-2.31.
* gnu/packages/base.scm (glibc-locales-2.31): New variable.
2022-05-31 22:32:17 +02:00
Ricardo Wurmus 70f88d53b6
gnu: Add glibc-locales-2.30.
* gnu/packages/base.scm (glibc-locales-2.30): New variable.
2022-05-31 22:32:17 +02:00
Ricardo Wurmus a484e019d3
gnu: Add glibc-2.32.
* gnu/packages/base.scm (glibc-2.32): New variable.
2022-05-31 22:32:14 +02:00
Maxim Cournoyer c35e508b4a
gnu: Remove python2-biopython.
* gnu/packages/bioinformatics.scm (python2-biopython): Delete variable.
2022-05-31 14:54:17 -04:00
Maxim Cournoyer ad030a0b7d
gnu: Remove pplacer-scripts.
* gnu/packages/bioinformatics.scm (pplacer-scripts): Delete variable.
2022-05-31 14:54:17 -04:00
Maxim Cournoyer d397cb6207
gnu: Remove pplacer.
* gnu/packages/bioinformatics.scm (pplacer): Delete variable.
2022-05-31 14:54:16 -04:00
Maxim Cournoyer 962d02904f
gnu: Remove python2-pytest-cov.
* gnu/packages/check.scm (python2-pytest-cov): Delete variable.
2022-05-31 14:54:16 -04:00
Maxim Cournoyer f7cfb57bb5
gnu: Remove python2-called-python.
* gnu/packages/python.scm (python2-called-python): Delete variable.
2022-05-31 14:54:16 -04:00
Maxim Cournoyer 96c0c18c3e
gnu: Remove python-prompt-toolkit-2.
* gnu/packages/python-xyz.scm (python-prompt-toolkit-2): Delete variable.
(python-prompt-toolkit)[properties]: Delete field.
(python-jupyter-console): Replace python-prompt-toolkit-2 with
python-prompt-toolkit.
2022-05-31 14:54:16 -04:00
Maxim Cournoyer 5d8fb87127
gnu: Remove python2-setuptools.
* gnu/packages/python-xyz.scm (python2-setuptools): Delete variable.
(python-setuptools)[properties]: Delete field.
* gnu/packages/syncthing.scm (syncthing-gtk): Delete commented native input.
* guix/lint.scm (check-inputs-should-not-be-an-input-at-all): Remove obsolete entries.
2022-05-31 14:54:16 -04:00
Maxim Cournoyer 026fca8b5b
gnu: Remove python2-checkm-genome.
* gnu/packages/bioinformatics.scm (python2-checkm-genome): Delete variable.
2022-05-31 14:54:15 -04:00
Maxim Cournoyer 12a16c3166
gnu: qtwebengine: Re-style inputs.
* gnu/packages/qt.scm (qtwebengine)[phases]: Delete trailing #t.
{substitute-source}: Use search-input-file.
[inputs, native-inputs]: Use new style.
2022-05-31 14:54:15 -04:00
Maxim Cournoyer 0740b12df3
gnu: Remove python2-backports-csv.
* gnu/packages/python-xyz.scm (python2-backports-csv): Delete variable.
2022-05-31 14:54:15 -04:00
Maxim Cournoyer a55151703f
gnu: python2-six: Disable tests.
* gnu/packages/python-xyz.scm (python2-six)[native-inputs]: Clear.
[phases]: Delete check phase.
2022-05-31 14:54:15 -04:00
Maxim Cournoyer b89669f034
gnu: Remove python2-fonttools.
* gnu/packages/python-xyz.scm (python2-fonttools): Delete variable.
(python-fonttools)[properties]: Delete field.
2022-05-31 14:54:14 -04:00
Maxim Cournoyer 25a1d0f63d
gnu: Remove python2-py.
* gnu/packages/python-xyz.scm (python2-py): Delete variable.
2022-05-31 14:54:14 -04:00
Maxim Cournoyer 28bddb7d4f
gnu: Remove python2-pyparsing.
* gnu/packages/python-build.scm (python2-pyparsing): Delete variable.
(python-pyparsing)[properties]: Delete field.
2022-05-31 14:54:14 -04:00
Maxim Cournoyer 9165283a1c
gnu: Remove python2-setuptools-scm.
* gnu/packages/python-xyz.scm (python2-setuptools-scm): Delete variable.
(python-lfdfiles)[properties]: Delete field.
2022-05-31 14:54:14 -04:00
Maxim Cournoyer a683c74e9a
gnu: Remove python2-six-bootstrap.
* gnu/packages/python-build.scm (python2-six-bootstrap): Delete variable.
2022-05-31 14:54:14 -04:00
Maxim Cournoyer 9fe706c92e
gnu: Remove python2-pyxdg.
* gnu/packages/freedesktop.scm (python2-pyxdg): Delete variable.
2022-05-31 14:54:13 -04:00
Maxim Cournoyer e5c6816ddf
gnu: Remove python2-wcwidth.
* gnu/packages/python-xyz.scm (python2-wcwidth): Delete variable.
2022-05-31 14:54:13 -04:00
Maxim Cournoyer f451a8e80c
gnu: openbox: Patch for Python 3.
* gnu/packages/patches/openbox-python3.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/openbox.scm (openbox)[source]: Apply it.
[arguments]: New field.
[propagated-inputs]: Replace python2-pyxdg with python-pyxdg.
[native-inputs]: Replace python-2 with python-wrapper.
Add autoconf, automake, gettext-minimal and libtool.
2022-05-31 14:54:13 -04:00
Maxim Cournoyer 88739a96be
gnu: Remove python2-pyyaml.
* gnu/packages/python-xyz.scm (python2-pyyaml): Delete variable.
(python-jsonschema)[properties]: Delete field.
2022-05-31 14:54:13 -04:00
Maxim Cournoyer cfa04b1c6c
gnu: ocaml-dose3: Disable tests to avoid Python 2 dependencies.
* gnu/packages/ocaml.scm (ocaml-dose3)[tests?]: Set to #f.
[native-inputs]: Use new style.  Remove python-2 and python2-pyyaml.
2022-05-31 14:54:13 -04:00
Maxim Cournoyer 0fa989172d
gnu: Remove python2-nose.
* gnu/packages/check.scm (python2-nose): Delete variable.
(python-nose)[properties]: Delete field.
2022-05-31 14:54:12 -04:00
Maxim Cournoyer 9c19bdbf5c
gnu: python-setproctitle: Delete obsolete phase.
* gnu/packages/python-xyz.scm (python-setproctitle)
[phases]{patch-Makefile}: Delete phase.
2022-05-31 14:54:12 -04:00
Maxim Cournoyer 4a0e996ada
gnu: pdf2djvu: Disable tests to avoid Python 2 dependencies.
* gnu/packages/djvu.scm (pdf2djvu)[tests]: Set to #f.
[test-target]: Delete argument.
[native-inputs]: Use new style.  Delete python-2 and python2-nose.
[inputs]: Use new style.
2022-05-31 14:54:12 -04:00
Maxim Cournoyer 61d0c52b9d
gnu: Remove python2-attrs-bootstrap.
* gnu/packages/python-xyz.scm (python2-attrs-bootstrap): Delete variable.
2022-05-31 14:54:12 -04:00