24f3b2eb10
gnu: Add x-resize.
...
* gnu/packages/xdisorg.scm (x-resize): New variable.
Change-Id: Ia36c07fba5a90f792cfe50b1e060891cf5706839
2023-12-29 22:46:11 -05:00
3d445618a1
gnu: guile-udev: Update to 0.3.0.
...
* gnu/packages/guile-xyz.scm (guile-udev): Update to 0.3.0.
[arguments]: Move check phase after install phase.
Change-Id: I0cf0683e9ea3e73b9e5b44892796d79925937b4e
2023-12-29 22:45:45 -05:00
f76ca2b0e8
gnu: Add Sirikali.
...
* gnu/packages/file-systems.scm (sirikali): New variable
Change-Id: Ie46cf269dac1ba842d935221b2372fb3d8a6ea2d
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-29 17:13:36 -05:00
6eb7eb1f05
gnu: linux-libre 5.15: Update to 5.15.145.
...
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.145.
(linux-libre-5.15-pristine-source): Update hash.
Change-Id: Ibb9b7e939530f25385ef7564cccdd98e270f6698
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-29 15:06:11 -05:00
d263c49919
gnu: Transmission: Update to 4.0.5.
...
* gnu/packages/bittorrent.scm (transmission): Update to 4.0.5.
[source]: Use 'transmission-4.0.5-fix-build.patch'.
* gnu/packages/patches/transmission-4.0.5-fix-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Change-Id: I8e9486dca07f01628e7886e7ac5757d511056cb7
2023-12-29 14:57:37 -05:00
ceb6987288
gnu: tremc: Update to 0.9.3-1.d8deaa5.
...
* gnu/packages/bittorrent.scm (tremc): Update to 0.9.3-1.d8deaa5.
Change-Id: Ib138825770172c02eaa91ced5f226fd87c7cfb1c
2023-12-29 14:57:29 -05:00
a14a94deb2
gnu: swaylock: Fix cross-compiling.
...
* gnu/packages/wm.scm (swaylock)
[native-inputs]: When cross-compiling, add pkg-config-for-build wayland.
[inputs]: When cross-compiling, add wayland-protocols.
Change-Id: I24274502375f51411576642d87496b8be2e42c45
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-29 19:48:16 +01:00
0f2164c577
gnu: libid3tag: Fix cross-compiling.
...
* gnu/packages/mp3.scm (libid3tag)
[native-inputs]: when cross compiling to {riscv,aarch}64-linux-gnu, add config.
[arguments]: when target {riscv,aarch}64-linux-gnu, add update-config-scripts phase.
Change-Id: I715e20b7d0aeabe7eba76185b542d9d184167448
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-29 19:48:16 +01:00
2c371d2cd9
gnu: f3: Fix cross-compiling.
...
* gnu/packages/disk.scm (f3)
[arguments]: Use Gexp.
Change-Id: I906a2b7b7691ae53592cfa35ba64fc7e7d735664
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-29 19:48:16 +01:00
c5c28df899
gnu: xcb-util-renderutil: Fix cross-compiling to riscv64-linux.
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* gnu/packages/xorg.scm (xcb-util-renderutil)
[native-inputs]: When cross compiling to riscv64-linux-gnu, add config.
[arguments]: When target riscv64-linux-gnu, add update-config-scripts phase.
Change-Id: I906a2b7b7691ae53592cfa35ba64fc7e7d735664
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-29 19:48:16 +01:00
2911aaa9ae
gnu: libmng: Fix cross-compiling to riscv64-linux.
...
* gnu/packages/image.scm (libmng)
[native-inputs]: When cross compiling to riscv64-linux-gnu, add config.
[arguments]: When target riscv64-linux-gnu, add update-config-scripts phase.
Change-Id: I906a2b7b7691ae53592cfa35ba64fc7e7d735664
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-29 19:48:16 +01:00
375200111d
gnu: python-dm-tree: Fix build.
...
* gnu/packages/python-xyz.scm (python-dm-tree)[arguments]: Drop
--whole-archive linker arguments because with them symbols provided by
libabsl_hash.a would not be found.
Change-Id: Id9ea0e233dc9a1cc76c88c08314803671e4810f9
2023-12-29 17:26:17 +01:00
4d8b93e865
gnu: Add python-pymemcache.
...
* gnu/packages/python-xyz.scm (python-pymemcache): New variable.
Change-Id: I2141c79d01d8a59e9cd4ee2fbef608ba882ffaa9
2023-12-29 13:26:47 +01:00
f90d6adec7
gnu: gnunet-gtk: Update to 0.20.0.
...
* gnu/packages/gnunet.scm (gnunet-gtk): Update to 0.20.0.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: I293aecd0e7074d2b522d955ab4509a5eeb1cf7d6
2023-12-29 10:45:45 +01:00
d68517059f
gnu: gnunet: Update to 0.20.0.
...
* gnu/packages/gnunet.scm (gnunet): Update to 0.20.0.
[source]: Remove snippet.
Change-Id: I1157f586764f9282d331596ca83bb8850ddee7ab
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-12-29 10:44:03 +01:00
d4cef7edff
gnu: spatialite-tools: Update to 5.1.0a.
...
* gnu/packages/geo.scm (spatialite-tools): Update to 5.1.0a.
Change-Id: I2dd09003d090db692d6056402cef55e1c1203684
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-12-29 10:30:44 +01:00
6a7db35524
gnu: cl-clog: Fix build.
...
* gnu/packages/lisp-xyz.scm (sbcl-clog)[arguments]: Add 'fix-symbol-name'
phase.
Change-Id: If9f5546eb252c69bb12a0904eb9db37140a90d24
2023-12-29 10:27:19 +01:00
fdc6ff3326
gnu: cl-mgl-pax: Update to 0.3.0-1.6782eb0.
...
* gnu/packages/lisp-xyz.scm (sbcl-mgl-pax): Update to 0.3.0-1.6782eb0.
[inputs]: Add sbcl-trivial-utf-8.
Change-Id: I0d78ec4cca4924703adfabfa0e536933f345256d
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-12-29 09:51:38 +01:00
35cb74823f
gnu: cl-3bmd: Update to 0.0.0-4.e68b2d4.
...
* gnu/packages/lisp-xyz.scm (sbcl-3bmd): Update to 0.0.0-4.e68b2d4.
Change-Id: I2e2a4f3fc96bf70b72a15840aa85349a3d71be02
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-12-29 09:43:23 +01:00
24dcb4b36c
gnu: cl-filesystem-utils: Update to 1.0.0-2.a07e8b6.
...
* gnu/packages/lisp-xyz.scm (sbcl-filesystem-utils): Update to
1.0.0-2.a07e8b6.
Change-Id: I5823f315d0f400d2e447afeee73d6b03ebe685c8
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-12-29 09:40:33 +01:00
62e8cc113a
gnu: cl-pathname-utils: Update to 1.1.0-3.f28068a.
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* gnu/packages/lisp-xyz.scm (sbcl-pathname-utils): Update to
1.1.0-3.f28068a.
Change-Id: Ieaff98da3cff210c9cbf1022e3cebffe2ed38efa
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-12-29 09:35:43 +01:00
7722da6fa5
services: laminar: Add configuration option for supplementary groups.
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* gnu/services/ci (<laminar-configuration>)[supplemental-groups]: New field.
(laminar-shepherd-service): Exec laminard with supplementary groups.
(laminar-account): Add supplementary groups to laminar user.
* doc/guix.texi (Laminar): Document new configuration field.
Change-Id: Iebfdbb58ea8c6dfa22bb8f64f6463e3ad133d2f9
2023-12-28 11:02:56 -05:00
9c0a06c98c
gnu: torbrowser: Change version to 13.0.8.
...
* gnu/packages/tor.scm (%torbrowser-version): New variable.
(%torbrowser-firefox-version): New variable.
(torbrowser-assets)[version]: Use %torbrowser-version.
(torbrowser)[version]: Use %torbrowser-version.
[source]: Use %torbrowser-firefox-version.
[arguments]: Use the package version.
Change-Id: I4d262e0a9528ff515da89c31589d88201dcdf941
2023-12-28 16:25:07 +01:00
bc509aba83
gnu: Add python-ast-decompiler.
...
* gnu/packages/python-xyz.scm (python-ast-decompiler): New variable.
Change-Id: Id0f47c866e72c9f7053da47fdd7aea840a191e62
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-28 10:25:09 +01:00
5f2a3c3ebc
gnu: python-flake8-isort: Update to 6.1.0.
...
* gnu/packages/python-xyz.scm (python-flake8-isort): Update to 6.1.0.
[arguments]<#:phases>: Update check phase, because tests have been moved to run_tests.py.
[propagated-inputs]: Remove python-testfixtures.
Change-Id: Iecaf50021c8f29fb083f7a85b7ac731836e97384
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-28 10:23:41 +01:00
53f51a908b
gnu: Add python-pytest-cookies.
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* gnu/packages/python-check.scm (python-pytest-cookies): New variable.
Change-Id: I0b085d345bf1bce5fc9c03315da06954cf2125cb
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-28 10:21:55 +01:00
eb5554794e
gnu: sssd: Update to 2.9.3.
...
* gnu/packages/sssd.scm (sssd): Update to 2.9.3.
Change-Id: I43c155ff69e7f0dbb96173056683855871eca749
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-28 10:19:17 +01:00
eeb29e167b
gnu: cdparanoia: Fix cross-compiling.
...
* gnu/packages/cdrom.scm (cdparanoia)
[native-inputs]: when cross compiling to {riscv,aarch}64-linux-gnu, add config.
[arguments]: when target {riscv,aarch}64-linux-gnu, add update-config-scripts phase.
<#:configure-flags>: when cross-compiling, use `(assoc-ref %outputs "out")'.
Change-Id: I442c668c3d52c241f0d405f51ea8d995bfefd3fd
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-28 10:16:35 +01:00
d460b12d76
gnu: Add python-rpds-py.
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* gnu/packages/python-xyz.scm (python-rpds-py): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: I6f4d80cc7a9a3d591fcf894375ef14e079573c0d
2023-12-28 10:12:35 +01:00
725a730482
gnu: Add rust-rpds-1.
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* gnu/packages/crates-io.scm (rust-rpds-1): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: I91b02a357e679ab4b8361bf232d2fec473a5f910
2023-12-28 10:12:35 +01:00
1db966e1bb
gnu: Add rust-archery-1.
...
* gnu/packages/crates-io.scm (rust-archery-1): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: Ie0b29e5c3163e0202327ce5661393ee1d3925d89
2023-12-28 10:12:35 +01:00
8838aff2b0
gnu: Add rust-compiletest-rs-0.10.
...
* gnu/packages/crates-io.scm (rust-compiletest-rs-0.10): New variable.
(rust-compiletest-rs-0.3): Inherit from rust-compiletest-rs-0.10.
[home-page, synopsis, description, license]: Remove them.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: Ibd6fc9fa1803df3a804801a10923b8b70c1f4073
2023-12-28 10:11:58 +01:00
0081426c70
gnu: Add rust-triomphe-0.1.
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* gnu/packages/crates-io.scm (rust-triomphe-0.1): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: I4bd9ea34b30ae03f8f8dbc4a083d6e246c746ee5
2023-12-28 10:06:48 +01:00
2babbc387a
gnu: Add rust-unsize-1.
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* gnu/packages/crates-io.scm (rust-unsize-1): New variable.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: Iae3dcb97809622e79ae6dc74ed94723ff1da8e29
2023-12-28 10:03:16 +01:00
931d893c55
gnu: gthumb: Improve style.
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* gnu/packages/gnome.scm (gthumb):
[arguments]: Use gexp.
[native-inputs]: Rewrite using list.
[inputs]: Rewrite using list.
Change-Id: I925c3ac0ebef89534608926545309ff232e2af01
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-27 21:58:29 +01:00
93ac4c20bf
chromium-extension: Compute json at argument evaluation time.
...
* gnu/build/chromium-extension.scm (make-chromium-extension): Make use of the
make-signing-key procedure inside the argument field, making sure that it is
not evaluated at file-load time. This would otherwise try to resolve gnutls
when we can't guarantee it's defined because of dependency cycles.
Change-Id: Ia7b13acfbca475c2df073e9a88fc8bb9264dd968
2023-12-27 17:18:52 +01:00
8f03a51f5c
gnu: passff: Update to 1.16.
...
* gnu/packages/browser-extensions.scm (passff): Update to 1.16.
Change-Id: If1db92641ee0919ff9d6bf02db2efbc2863cf395
2023-12-27 15:29:09 +01:00
acc3781b2f
gnu: passff-host: Update to 1.2.4.
...
* gnu/packages/browser-extensions.scm (passff-host): Update to 1.2.4.
Change-Id: I66f7d9bc0026723169b4509f1a99188dd3b7fb44
2023-12-27 15:29:09 +01:00
33b816864d
gnu: google-highway: Update to 1.0.7.
...
* gnu/packages/cpp.scm (google-highway): Update to 1.0.7.
Change-Id: I8374135da8343910156709c255f144dab1554cc0
2023-12-27 15:40:37 +02:00
b28bcd49c2
gnu: google-highway: Build shared libraries.
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* gnu/packages/cpp.scm (google-highway)[arguments]: Add configure-flag
to build shared libraries.
Change-Id: Ic222dd454290742c7c964a1a5a5b7d8d7533c3e1
2023-12-27 15:40:37 +02:00
756ba0429e
gnu: Add torbrowser.
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* gnu/packages/tor.scm (torbrowser): New variable.
(torbrowser-assets): New variable.
* gnu/packages/browser-extensions.scm (noscript): New variable.
(noscript/icecat): New variable.
Co-authored-by: André Batista <nandre@riseup.net>
Change-Id: I73dc53905e4a028108bb34aae07e44256cf16c85
2023-12-27 12:13:10 +01:00
5bd80ccd69
gnu: linux-libre 4.14: Update to 4.14.334.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.334.
(linux-libre-4.14-pristine-source): Update hash.
Change-Id: I36865a5bedf9cfb53ea7371595466820c6a77b11
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:59 -05:00
8aa229f07f
gnu: linux-libre 4.19: Update to 4.19.303.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.303.
(linux-libre-4.19-pristine-source): Update hash.
Change-Id: I87a5ec1a8ed8808853bc76be594f6bd563a6a7f9
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:58 -05:00
90135615c1
gnu: linux-libre 5.4: Update to 5.4.265.
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.265.
(linux-libre-5.4-pristine-source): Update hash.
Change-Id: Ie52a0d6b6d19143341ac02d068b93e19c5e45a18
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:58 -05:00
07eaadabda
gnu: linux-libre 5.10: Update to 5.10.205.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.205.
(linux-libre-5.10-pristine-source): Update hash.
Change-Id: I63dcffd43b83888ca41e41b3b69b1aecb6a88026
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:58 -05:00
cacd2d5e3d
gnu: linux-libre 5.15: Update to 5.15.144.
...
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.144.
(linux-libre-5.15-pristine-source): Update hash.
Change-Id: Ib66272d8e15a966e04acbbb1a29eff2e263592d2
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:58 -05:00
e5161642af
gnu: linux-libre 6.1: Update to 6.1.69.
...
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.69.
(linux-libre-6.1-pristine-source): Update hash.
Change-Id: If6a3d1d5a9252386c44beb60e3f4d0f535ef37ff
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:57 -05:00
046b80d565
gnu: linux-libre 6.6: Update to 6.6.8.
...
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.8.
(linux-libre-6.6-pristine-source): Update hash.
Change-Id: I31ac97a55842399046278291a2ebcc038159f38d
Signed-off-by: Leo Famulari <leo@famulari.name>
2023-12-26 08:56:54 -05:00
afdbf7f271
gnu: home: Add home-pipewire service.
...
This adds a set of home Shepherd services which will start the required
services for a functional PipeWire setup.
* gnu/home/services/sound.scm (home-pipewire-shepherd-service,
home-wireplumber-shepherd-service, home-pipewire-shepherd-services,
home-pipewire-asoundrc, home-pipewire-xdg-configuration,
home-pipewire-pulseaudio-shepherd-service): New procedures.
(home-pipewire-service-type): New service type.
(home-pipewire-configuration): New struct.
(home-pipewire-disable-pulseaudio-auto-start): New variable.
* doc/guix.texi (Sound Home Services): Document it.
Change-Id: I99e0ae860de91d459c3c554ec5503bf35f785a2a
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2023-12-26 15:41:59 +03:00
a4a14ab6d7
gnu: Add lammps-serial.
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* gnu/packages/bioinformatics.scm (lammps-serial): New variable.
Change-Id: Ifd189a28f423e43ddda8654f758486737eef4a3c
2023-12-25 23:21:07 +01:00
95879674c2
gnu: Add lammps.
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* gnu/packages/bioinformatics.scm (lammps): New variable.
Change-Id: Ic9745a623300b82b7fb1417437220415305e7332
2023-12-25 19:52:13 +01:00
103dc35111
Revert "gnu: ed: Update to 1.19."
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This reverts commit 0d8b0af0fe
2023-12-25 20:03:55 +02:00
3e41b252cf
gnu: Adjust to removing ed.scm and nano.scm
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This is a follow-up to f6817e71dfe11e65a9ad
2023-12-25 19:58:21 +02:00
2a66a96634
gnu: scotch: Update to 7.0.4
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* gnu/packages/maths.scm (scotch): Update to version 7.0.4.
Change-Id: I493113ecc1694e8812fb38d8e4641398eb174b34
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:48 +01:00
f21e732e0d
gnu: shotwell: Fix build.
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* gnu/packages/gnome.scm (shotwell): Fix build.
[inputs]: Swap webkitgtk to webkitgtk-for-gtk3.
Change-Id: I457ed30f3bf6335c7dd88daf2132b4a8857d86c6
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:47 +01:00
7287b520eb
gnu: emacs-tempel: Update to 1.0.
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* gnu/packages/emacs-xyz.scm (emacs-tempel): Update to 1.0.
Change-Id: I61737161384615a4c18e4ce318b0c538db1372ca
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:47 +01:00
b50b1c819e
gnu: emacs-tempel-collection: Update to 0.1-1.4a1d717.
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* gnu/packages/emacs-xyz.scm (emacs-tempel-collection): Update to 0.1-1.4a1d717.
Change-Id: Iac96a06c183fa2f6f246e08283a7bca2e00aac32
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:47 +01:00
e11e65a9ad
gnu: Remove nano.scm.
...
Removes nano.scm and places the `nano' package within text-editors.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove nano.scm from build.
* gnu/packages/nano.scm: Delete file.
* gnu/packages/text-editors.scm (nano): New variable.
[copyright header]: Transfer copyright notices from nano.scm to text-editors.scm.
Change-Id: I257f68a3072481f556db208bd1bd34e6eec79b47
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:47 +01:00
0d8b0af0fe
gnu: ed: Update to 1.19.
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* gnu/packages/text-editors.scm (ed): Update to 1.19.
Change-Id: I02ec92086fe122a636d24e8bc3afb3c3f118651c
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:47 +01:00
f6817e71df
gnu: Remove ed.scm.
...
Remove ed.scm and move the `ed' package to text-editors.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove ed.scm from build.
* gnu/packages/ed.scm: Delete file.
* gnu/packages/text-editors.scm (ed): New variable.
[copyright header]: Transfer copyright notices from ed.scm to text-editors.scm.
Change-Id: I827a2943f4849085186f2a25a9c8676cf4b6a7fd
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-25 17:44:47 +01:00
0d13d09542
gnu: Fix source URI for rust crates.
...
This follows an upstream change no longer correcting for typos between
'-' and '_'.
* gnu/packages/crates-graphics.scm, gnu/packages/crates-io.scm: Adjust
sources to use the correct source URI.
Change-Id: I4a304030a24e44b79542205d2db9e3120307cd64
2023-12-24 11:30:47 +02:00
a819663264
gnu: fzy: Fix cross-compilation.
...
* gnu/packages/shellutils.scm (fzy)[arguments]: Use cc-for-target.
Change-Id: Ic9e929ce3e85ec07f44ae7f8597a02a64edd5bf5
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-23 17:02:04 +01:00
dc5f25cea6
gnu: fzy: Use Gexps.
...
* gnu/packages/shellutils.scm (fzy)[arguments]: Use Gexps.
Change-Id: Ic9e929ce3e85ec07f44ae7f8597a02a64edd5bf5
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-23 17:02:03 +01:00
2bf5102aac
gnu: swineherd: Update to 0.0.4.
...
* gnu/packages/admin.scm (swineherd): Update to 0.0.4.
Change-Id: Ie8ca91c0de969fdfd524be915a2eee020bb3f7df
2023-12-23 12:26:50 +01:00
bdec4d867a
gnu: Add python-icegrams.
...
* gnu/packages/python-xyz.scm (python-icegrams): New variable.
Change-Id: Ia0044304f8b2002a5362813448a6172c2f3eef5b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-23 11:17:50 +01:00
e008a1baca
gnu: Add unpaper.
...
* gnu/packages/pdf.scm (unpaper): New variable.
Change-Id: Ic71c5b62dabdd18e617e499417afb1c9e112520b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-23 11:17:49 +01:00
2c8cdb0550
gnu: slim: Update to 1.4.0.
...
* gnu/packages/display-managers.scm (slim)[version]: Update to 1.4.0.
[inputs]: Remove input label.
[arguments]: Use gexp and remove fix-0-pointer-comparison.
[home-pages]: Update to slim-fork's url.
* gnu/packages/patches/slim-config.patch: Port to slim-1.4.0.
* gnu/packages/patches/slim-display.patch: Port to slim-1.4.0.
* gnu/packages/patches/slim-reset.patch: Deleted, no ablilty to port this
patch for big change in v1.4.0.
* gnu/packages/patches/slim-session.patch: Deleted. seem to work without this
patch, further observation is needed.
* gnu/packages/patches/slim-sigusr1.patch: Deleted, fixed in upstream.
* gnu/local.mk: Remove slim-reset.patch, slim-session.patch, slim-sigur1.patch.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-23 11:17:49 +01:00
3320c97043
gnu: rr: Update to 5.7.0.
...
* gnu/packages/debug.scm (rr): Update to 5.7.0.
Change-Id: I5b70f5d266876077b533182ccdcd2160fec6fcc4
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-23 11:17:49 +01:00
d211e54510
gnu: cryptsetup: Fix cross-compilation.
...
* gnu/packages/cryptsetup.scm (cryptsetup): Set explicit
`--with-libgcrypt-prefix' for cross-compilation.
Change-Id: I39b8d07926865dd168f9db8d3eb84fafbf3f3c56
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-23 10:47:13 +01:00
304d519386
gnu: argon2: Fix cross-compilation.
...
* gnu/packages/password-utils.scm (argon2): Use `cc-for-target'.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: Ia33ad67a2a05d82be036080f1938865daa11cfe9
2023-12-23 10:47:08 +01:00
ab1ff7ca40
images: Add orangepi-r1-plus-lts image.
...
* gnu/local.mk: Register image.
* gnu/system/images/orangepi-r1-plus-lts-rk3328.scm: New file.
* gnu/system/install.scm (orangepi-r1-plus-lts-rk3328-installation-os):
New variable.
Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2023-12-22 16:06:15 -08:00
88fb95903c
gnu: bootloader: Add orangepi-r1-plus-lts-rk3328 bootloader.
...
* gnu/bootloader/u-boot.scm (install-orangepi-r1-plus-lts-rk3328-u-boot,
u-boot-orangepi-r1-plus-lts-rk3328-bootloader): New variables.
* gnu/packages/bootloaders.scm (u-boot-orangepi-r1-plus-lts-rk3328): New
variable.
Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2023-12-22 16:06:03 -08:00
fad93748cd
gnu: u-boot: Update to 2023.10.
...
* gnu/local.mk: De-register patches.
* gnu/packages/bootloaders.scm (u-boot): Update to 2023.10.
[source]: Remove patches.
(u-boot-documentation)[inputs]: Add python-sphinx-prompt.
* gnu/packages/patches/u-boot-allow-disabling-openssl.patch: Refresh.
* gnu/packages/patches/u-boot-fix-build-python-3.10.patch: Delete file.
* gnu/packages/patches/u-boot-fix-u-boot-lib-build.patch: Delete file.
* gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch: Delete file.
* gnu/packages/patches/u-boot-rockchip-inno-usb.patch: Refresh.
* gnu/packages/patches/u-boot-sifive-prevent-reloc-initrd-fdt.patch:
Delete file.
Modifed-by: Vagrant Cascadian <vagrant@debian.org>
Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2023-12-22 16:05:50 -08:00
4a1b3830a8
gnu: dante: Enable preloading support.
...
Fixes <https://issues.guix.gnu.org/63250 >.
Dante uses dlopen which doesn't work with libc.so but libc.so.6.
This fixes socksify, which is patched to skip invoking uname needlessly.
* gnu/packages/networking.scm (dante): Enable preloading support.
* gnu/packages/patches/dante-non-darwin.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
References: https://github.com/NixOS/nixpkgs/pull/68418#discussion_r343625853
Change-Id: I03a5b6b6e11cf6a0453a4968ff00c6dd627249a8
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:16 +01:00
211c66d49e
gnu: Add node-safe-stable-stringify.
...
* gnu/packages/node-xyz.scm (node-safe-stable-stringify): New variable.
Change-Id: Ia54a44403807479652fe5831b08acdb661dca9e1
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:16 +01:00
76ed5ec9f7
gnu: Add node-normalize-path.
...
* gnu/packages/node-xyz.scm (node-normalize-path): New variable.
Change-Id: I9afbede1f16ed1157fed95d3925b97945a73c91b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:16 +01:00
cd0b20582a
gnu: tensorflow-lite: Update to 2.13.1
...
* gnu/packages/machine-learning.scm (tensorflow-lite): Update to 2.13.1
Change-Id: Icc7ff237660006e2320df02b353ccab5dac7b7d2
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:16 +01:00
6bb96ac767
gnu: emacs-jinx: Update to 1.0.
...
* gnu/packages/emacs-xyz.scm (emacs-jinx): Update to 1.0.
Change-Id: I6dd54a220ba6c0bd466a83f7051bf8459cf2840a
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:15 +01:00
eae83c662e
gnu: Add liquidprompt.
...
* gnu/packages/shellutils.scm (liquidprompt): New variable.
Change-Id: I0004568df6dd6011f5e65c9894ce97a8c2533f84
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:15 +01:00
96b6e7b1a4
gnu: node-lts: Update to 18.19.0.
...
* gnu/packages/node.scm (node-lts): Update to 18.19.0.
Change-Id: Ide542157571774da6d70fc114ec095f645a79b8b
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:15 +01:00
ea83ffbc39
gnu: Add python-pyqtwebengine, version 6.6.0.
...
* gnu/packages/qt.scm (python-pyqtwebengine-6): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:15 +01:00
6dc9888302
gnu: Add python-pyqt, version 6.5.2.
...
* gnu/packages/qt.scm (python-pyqt-6): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:15 +01:00
c758423033
gnu: Add python-pyqt6-sip.
...
* gnu/packages/qt.scm (python-pyqt6-sip): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-22 17:47:15 +01:00
0de5677a18
gnu: python-cookiecutter: Update to 2.5.0.
...
* gnu/packages/python-xyz.scm (python-cookiecutter): Update to 2.5.0.
[arguments]<#:phases>: Add 'pre-check phase to set a writable home directory
and patch dynamically generated shebangs. Replace the default check phase to use pytest.
[native-inputs]: Add bash-minimal and git. Remove python-pytest-catchlog.
[propagated-inputs]: Add python-arrow, python-pyyaml and python-rich. Remove
python-future, python-jinja2-time, python-poyo, python-text-unidecode and
python-whichcraft.
Change-Id: Ifc612136fa9a67ad643d0e1c031d173a3b3904a4
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-12-22 16:44:40 +00:00
f18f59fa4b
gnu: skalibs: Correct symlink permissions on the hurd.
...
* gnu/packages/skarnet.scm (skalibs)[arguments]: Patch tools/install.sh umask.
[supported-systems]: Include i586-gnu.
Change-Id: Ia431a06d6150b33562dcf0f57eb3ba0fd84ba864
2023-12-22 16:43:23 +00:00
aa631ea62e
gnu: guix-build-coordinator: Update to 0-93.e4af682.
...
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-93.e4af682.
Change-Id: Ice91ef075db02d3f2bcb445d4fd5621bc00a02a0
2023-12-22 16:41:44 +00:00
e3faf52c92
services: guix: Move GUIX_LOCPATH handling to packages.
...
I think this might be better than handling it in the service. I'm seeing
locale issues on the hurd which I hope this will address.
* gnu/packages/package-management.scm (guix-build-coordinator,
guix-build-coordinator/agent-only):
* gnu/services/guix.scm (guix-build-coordinator-shepherd-services,
guix-build-coordinator-agent-shepherd-services):
Change-Id: I07ca424f434854176326a19177dc5573d53b59c2
2023-12-22 16:41:44 +00:00
cbe64c316d
services: guix: Remove guix-build-coordinator-queue-builds service.
...
This has been effectively replaced by the bffe.
* gnu/services/guix.scm (<guix-data-service-configuration>): Remove record
type.
(guix-build-coordinator-queue-builds-shepherd-services,
guix-build-coordinator-queue-builds-activation,
guix-build-coordinator-queue-builds-account): Remove procedures
(guix-build-coordinator-queue-builds-service-type): Remove service type.
Change-Id: I2a233fb10b12cc9bfddebaa35928b25c243f82a2
2023-12-22 16:41:42 +00:00
25b83bd9e4
gnu: jpegoptim: Update to 1.5.5.
...
* gnu/packages/image.scm (jpegoptim): Update to 1.5.5.
[arguments]<#:phases>: Remove argument.
[native-inputs]: Remove field.
[license]: Change to gpl3+.
Change-Id: I97fc63e20b5cf88c4ef04c2ea2c4a0888a1d0472
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-22 22:00:57 +08:00
ce7b2b57aa
gnu: mpv: Update to 0.37.0.
...
* gnu/packages/video.scm (mpv): Update to 0.37.0.
[build-system]: Switch to meson-build-system.
[arguments]<#:configure-flags>: Adjust accordingly.
<#:phases>: Remove set-up-waf phase.
<#:tests?>: Remove argument.
[native-inputs]: Add python-wrapper.
[inputs]: Add libplacebo, zimg.
Remove python-waf.
Change-Id: I0e61761a4d086a1185730f587869c2552b7cacb0
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-22 21:58:11 +08:00
8b249a1be6
gnu: libplacebo: Use gexps.
...
* gnu/packages/video.scm (libplacebo)[arguments]: Use gexps.
Change-Id: I0f0b043631a834ac2fc4f06acd9ac64b3d5f66c7
2023-12-22 21:58:06 +08:00
fbc6683ebb
gnu: libplacebo: Update to 6.338.1.
...
* gnu/packages/video.scm (libplacebo): Update to 6.338.1.
[native-inputs]: Add glad.
Change-Id: Ie9c35cfd964f110ff95ed486ee1c4f5724c82314
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-22 21:58:01 +08:00
1784ece7cb
gnu: Add glad, version 2.0.4.
...
* gnu/packages/gl.scm (glad): New variable.
Change-Id: I516d44dfc9272702c3ac31773df0b6c2d68ed99c
Modified-by: Hilton Chain <hako@ultrarare.space>
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-22 21:57:51 +08:00
4d49401031
gnu: glad-0.1: Use gexps.
...
* gnu/packages/gl.scm (glad-0.1)[arguments]: Use gexps.
Change-Id: I871ec0ff9c7731222f1dd0e8c95057efa1231992
2023-12-22 21:38:20 +08:00
b005a6f1d9
gnu: glad: Rename to glad-0.1.
...
* gnu/packages/gl.scm (glad): Rename variable to...
(glad-0.1): ...this.
* gnu/packages/electronics.scm (openboardview)[native-inputs]:
Adjust accordingly.
Change-Id: I5a9068186a899b8ff76feb51fd44f59e71cdb030
2023-12-22 21:38:06 +08:00
c3b9910198
gnu: Add wireplumber-minimal.
...
* gnu/packages/linux.scm (wireplumber-minimal): New variable.
Modified-by: Hilton Chain <hako@ultrarare.space>
Signed-off-by: Hilton Chain <hako@ultrarare.space>
Change-Id: I881c72bd0ad202a1ee3fff324f0d6c6b4bf66dd4
2023-12-22 15:57:19 +08:00
ca81317389
shepherd: Remove ‘make-forkexec-constructor/container’.
...
This was superseded by ‘least-authority-wrapper’.
* gnu/build/shepherd.scm (read-pid-file/container)
(make-forkexec-constructor/container): Remove.
Change-Id: I6acccdff2609a35807608f865a4d381146113a88
2023-12-22 00:31:42 +01:00
3d6583727e
services: Remove unnecessary references to (gnu build shepherd).
...
* gnu/services/databases.scm (memcached-shepherd-service): Remove
‘with-imported-modules’ form and ‘modules’ field.
* gnu/services/security-token.scm (pcscd-shepherd-service): Remove
‘with-imported-modules’ form.
* gnu/services/web.scm (hpcguix-web-shepherd-service): Likewise.
Change-Id: Ieb817508f1751e0c1ff551a0e078789a4a813c1c
2023-12-22 00:31:41 +01:00
62a08abea7
services: jami: Use ‘least-authority-wrapper’.
...
* gnu/services/telephony.scm (jami-configuration->command-line-arguments)
[wrapper]: New procedure.
Use it.
(jami-shepherd-services): In ‘start’ method of ‘jami’ service, use
‘fork+exec-command’ instead of ‘make-forkexec-constructor/container’.
Remove use of (gnu build shepherd).
Change-Id: Ic71c0c88477d92bf137d9d0a5832bae8721cc210
2023-12-22 00:31:41 +01:00
8bd1c14997
services: jami-dbus-session: Use ‘least-authority-wrapper’.
...
* gnu/services/telephony.scm (jami-shepherd-services): Use
‘least-authority-wrapper’ for ‘dbus-daemon’. Use ‘fork+exec-command’
instead of ‘make-forkexec-constructor/container’ in the ‘start’ method’.
Remove reference to (gnu build shepherd).
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Change-Id: I9d9f8de6ecea77950000ff64aa8c8d097dc028a0
2023-12-22 00:31:41 +01:00
2cc881ac13
tests: jami: Double timeouts.
...
* gnu/tests/telephony.scm (run-jami-test): Pass #:timeout to
‘wait-for-service’. Double number passed to ‘with-retries’.
Change-Id: Ib3c81a770c2d52b2eb40e4f28abc8e33f5c71fc8
2023-12-22 00:31:41 +01:00
204f08c43e
tests: jami: Check status of Jami D-Bus session.
...
* gnu/tests/telephony.scm (run-jami-test)["dbus session is up"]: New
test.
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Change-Id: Ifa9b57c732f3c64e1ec6bf3028b69a57cee56320
2023-12-22 00:31:41 +01:00
d3ffa06a4d
services: bitlbee: Remove use of ‘make-forkexec-constructor/container’.
...
This will only affect systems running Shepherd < 0.9.0, which was
released in August 2022.
* gnu/services/messaging.scm (bitlbee-shepherd-service): Remove
‘with-imported-modules’ and ‘modules’ field. Use
‘make-forkexec-constructor’ instead of
‘make-forkexec-constructor/container’ when ‘make-inetd-constructor’ is
missing.
Change-Id: I35a0487bccaee4799ad0d81388d540e5c7891f7e
2023-12-22 00:31:41 +01:00
bcad46cde6
services: pagekite: Add ‘configuration’ action.
...
* gnu/services/networking.scm (pagekite-shepherd-service): Add ‘actions’
field.
Change-Id: I04daa846d505b0700b574a82472ecd99b492d7c4
2023-12-22 00:31:41 +01:00
43acd98e41
services: pagekite: Use ‘least-authority-wrapper’.
...
* gnu/services/networking.scm (pagekite-shepherd-service): Define
‘config-file’ and ‘mappings’; define ‘pagekite’ in terms of
‘least-authority-wrapper’. Remove now-unneeded ‘with-imported-modules’
form and ‘modules’ field. Use ‘make-forkexec-constructor’ instead of
‘make-forkexec-constructor/container’.
Change-Id: I7c6c6266785f6a0f81a69d85f070779a0d6edd91
2023-12-22 00:31:40 +01:00
04b63ea195
gnu: openssh: Update to 9.6p1 [security-fixes].
...
Fixes CVE-2023-48795.
* gnu/packages/ssh.scm (openssh): Update to 9.6p1.
[arguments]<#:parallel-tests?>: Disable.
Change-Id: I8b7707894d904ec8bcccb943908fff2e69a1a027
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
2023-12-21 12:34:56 -05:00
97e517a568
gnu: libssh: Update to 0.10.6 [security-fixes].
...
Fixes CVE-2023-6004, CVE-2023-48795, and CVE-2023-6918.
* gnu/packages/ssh.scm (libssh): Update to 0.10.6.
Change-Id: Ie9d304d78b2629f41af9836e5c7eab5df6f26bb5
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
2023-12-21 12:30:15 -05:00
49a7a95ba4
gnu: Syncthing: Update to 1.27.1.
...
* gnu/packages/syncthing.scm (syncthing): Update to 1.27.1.
Signed-off-by: Leo Famulari <leo@famulari.name>
Change-Id: Ib95828dee7b2b8b5f852a47026f3bbff69361329
2023-12-20 19:09:15 -05:00
2b12c1238c
gnu: Add r-ncmisc.
...
* gnu/packages/cran.scm (r-ncmisc): New variable.
Change-Id: I54bbaf23244767bdb7cce9f31e604ba6998448a4
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-12-20 11:40:57 +01:00
9dbb618a80
gnu: i2pd: Update to 2.50.0.
...
* gnu/packages/i2p.scm (i2pd): Update to 2.50.0.
[native-inputs]: Add pkg-config, check.
[arguments]: Use G-Expressions.
<#:configure-flags>: Drop obsolete and defaulted flags. Enable testing with
cmake.
<#:phases>: Drop obsolete 'check replacement.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: If276d475587fa9431fbb9b55b051e71a2f5d39e3
2023-12-20 11:05:55 +01:00
51c0490267
gnu: bitcoin-core: Update to 26.0.
...
* gnu/packages/finance.scm (bitcoin-core): Update to 26.0.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: Ied4b14221f862e05f37fc0516392d1b474bc6d19
2023-12-20 10:42:23 +01:00
4af710b2ea
gnu: Add obs-pipewire-audio-capture.
...
* gnu/packages/video.scm (obs-pipewire-audio-capture): New variable.
Change-Id: I6f8e400a8ec81b84c65d948b6c30d41d74bd5dca
2023-12-20 11:46:40 +03:00
352594e812
gnu: icecat: Update to 115.6.0-guix0-preview1 [security fixes].
...
Includes fixes for CVE-2023-6856, CVE-2023-6857, CVE-2023-6858,
CVE-2023-6859, CVE-2023-6860, CVE-2023-6861, CVE-2023-6862,
CVE-2023-6863, CVE-2023-6864, CVE-2023-6865, and CVE-2023-6867.
* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2023-12-20 02:19:05 -05:00
dc2b59ddc1
gnu: axoloti-patcher: Remove trailing #T.
...
* gnu/packages/axoloti.scm (axoloti-patcher)[arguments]: Remove trailing #T
from build phase.
Change-Id: I1a741e41e7ae167cd72542c3f9cf9a13046bcd3c
2023-12-20 01:00:45 +01:00
1adf1e36d2
gnu: axoloti-patcher: Fix include paths.
...
* gnu/packages/axoloti.scm (axoloti-patcher)[arguments]: Add missing "c++"
sub-directory to search paths.
Change-Id: Ia3297cb24e02f92ad7af40881b9021af25093e67
2023-12-20 01:00:45 +01:00
a512bbd23a
gnu: ovmf: Set target to #f.
...
* gnu/packages/firmware.scm (ovmf)[arguments]: Set target to #f.
Change-Id: Iee1b731977f2731277d2e907ee2db2ad85af195f
2023-12-19 16:27:13 +02:00
d542593092
gnu: Add ovmf-riscv64.
...
* gnu/packages/firmware.scm (ovmf-riscv64): New variable.
Change-Id: I483bc4496d7874cc0e9983de36cfc7a90ef7591c
2023-12-19 16:27:13 +02:00
7a7ba2d075
gnu: ovmf: Build with newer gcc.
...
* gnu/packages/firmware.scm (ovmf)[arguments]: Remove 'hide-implicit-gcc
phase.
[native-inputs]: Remove gcc-5.
Change-Id: I2bcaea77019bb69214878713aa57cbef49c473db
2023-12-19 16:27:13 +02:00
edb794bbd4
gnu: ovmf-arm: Update to use GCC5.
...
* gnu/packages/firmware.scm (ovmf-arm): Updating OVMF to 202308 requires
GCC5, packages inheriting from ovmf also need to be updated.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: I3a7b3f450e0da39129e7cffce7482b8e391e3858
2023-12-19 16:27:13 +02:00
c67e8c12d8
gnu: ovmf-aarch64: Update to use GCC5.
...
* gnu/packages/firmware.scm (ovmf-aarch64): Updating OVMF to 202308
requires GCC5, packages inheriting from ovmf also need to be updated.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Iccd674f82c2f0160fa8097a09d10154be9736042
2023-12-19 16:27:13 +02:00
1c9908fad5
gnu: ovmf: Add OVMF_CODE and OVMF_VARS files.
...
* gnu/packages/firmware.scm (ovmf)[arguments]: Add OVMF_CODE.fd and
OVMF_VARS.fs to outputs as ovmf_code_arch.bin and ovmf_vars_arch.bin,
respectively, for both ia32 and x64 architectures.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Ie329f3f3515e7d015d9fbad01b8c2b82dc7da76e
2023-12-19 16:27:11 +02:00
57aaaf2903
gnu: ovmf: Update to 202308.
...
* gnu/packages/firmware.scm (ovmf): Update to 202308.
[arguments]: Adjust phases to not hardcode gcc toolchain version.
[native-inputs]: Remove python-2. Add perl, python-3.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: I74a7bd26240821aacf35e5020d9687406e7da9ed
2023-12-19 16:26:33 +02:00
aa373871cf
gnu: qemu: Update to 8.1.3.
...
* gnu/packages/virtualization.scm (qemu): Update to 8.1.3.
Change-Id: I9e9e90b836a0307637ead5893594b20d6850fe90
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-19 16:22:02 +02:00
8c07a2c2ba
gnu: composer-classloader: Use copy-build-system.
...
* gnu/packages/php-xyz.scm (composer-classloader)[build-system]: Switch
to the copy-build-system.
[arguments]: Adjust accordingly.
Change-Id: Idb39ba92d973362bd6d8c1dd944a5d46919de5df
2023-12-19 16:21:24 +02:00
fa92a7c2fe
gnu: font-jetbrains-mono: Use the correct license.
...
The build scripts are licensed under asl2.0 but the packaged font files
are licensed under silofl1.1.
* gnu/packages/fonts.scm (font-jetbrains-mono)[license]: Use silofl1.1
instead of asl2.0.
Change-Id: I256a89b6e4bdb368c9cc94cae0808f72c76e7599
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:48 +08:00
96f704548c
gnu: font-jetbrains-mono: Update to 2.304
...
* gnu/packages/fonts.scm (font-jetbrains-mono): Update to version 2.304.
Change-Id: Id325fda8f9b50cf830107823c6ca1b439a6bdca0
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:42 +08:00
04c9af0b00
gnu: traceroute: Update to 2.1.5.
...
* gnu/packages/networking.scm (traceroute): Update to 2.1.5.
Change-Id: I400292cd62afd76ca66e00071ae3afa45302735c
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:37 +08:00
dfc950689f
gnu: wireplumber: Update to 0.4.17.
...
* gnu/packages/linux.scm (wireplumber): Update to 0.4.17.
Change-Id: I1cdc156fde4cbbe6201f967db0701bb5dfdf1d7e
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:32 +08:00
d9c8432cb1
gnu: hyfetch: Update to 1.4.11.
...
* gnu/packages/admin.scm (hyfetch): Update to 1.4.11.
Change-Id: I244020ef556911107040e913ef76932ed97ae6e9
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:27 +08:00
491ca36e32
gnu: emacs-mbsync: Update to 0.1.2-5.d3c81da.
...
* gnu/packages/emacs-xyz.scm (emacs-mbsync): Update to 0.1.2-5.d3c81da.
Change-Id: Idf9a1807a2bdfec8bb12f6eee90c6ee12ca29877
2023-12-19 21:48:22 +08:00
6884770464
gnu: Add iptables-nft.
...
* gnu/packages/linux.scm (iptables-nft): New variable.
Change-Id: I281514fcf05e70b4d62f374269c50c76bb676f78
2023-12-19 21:48:17 +08:00
521247658f
gnu: r-sccustomize: Update to 2.0.1-1.3973745.
...
* gnu/packages/bioinformatics.scm (r-sccustomize): Update to 2.0.1-1.3973745.
Change-Id: I4e4b499a658eaed0396263d1d9fd277a541a13d9
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-12-19 14:44:13 +01:00
bed9103579
gnu: guile-udev: Fix dlopen error at run time.
...
* gnu/packages/guile-xyz.scm (guile-udev)
[arguments]: Add patch-extension-path phase.
Change-Id: I4620c234e8ac45dcc1c2a3ab8871b8ab9d9c35c0
2023-12-19 00:36:30 -05:00
9dab758791
build-system: Add ‘composer-build-system’.
...
* guix/build-system/composer.scm: New file.
* guix/build/composer-build-system.scm: New file.
* gnu/packages/aux-files/findclass.php: New file.
* Makefile.am: Add them.
* doc/guix.texi (Build Systems): Document it.
Co-authored-by: Julien Lepiller <julien@lepiller.eu>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: Ie6a05b42ff04d3ad774a0a20278a77e4820bb8f6
2023-12-18 23:16:55 +01:00
e8fd78d54e
gnu: Add composer-classloader.
...
* gnu/packages/php-xyz.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-18 23:16:28 +01:00
0a99d3a79d
gnu: zfs: Update to 2.1.14.
...
* gnu/packages/file-systems.scm (zfs): Update to 2.1.14.
Change-Id: I696467868924f1135ba678e8e743955d3767618f
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-18 21:10:38 +02:00
e84e33654c
gnu: ublock-origin: Update to 1.54.0.
...
* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.54.0.
(ublock-main-assets): Update to 76bd7cb53036a36f7e7df5ee9173f588ba8aa966.
(ublock-prod-assets): Update to a379a168fc149ffbd6d10cd0700d4ab4801e57f2.
Change-Id: I0296b45b684562afaef859b0144c875ff05cd2d8
2023-12-18 18:19:19 +01:00
29c94dd522
gnu: freeimage: Patch 2 CVEs.
...
* gnu/packages/image.scm (freeimage)[source]: Add patches.
* gnu/packages/patches/freeimage-CVE-2020-21428.patch,
gnu/packages/patches/freeimage-CVE-2020-22524.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
Change-Id: Iec114f2295cafbc8b55e81c0d8e4a361fd653152
2023-12-18 13:03:36 +02:00
f410d49eb2
Merge branch 'wip-webkit'
2023-12-18 09:29:48 +01:00
59f60f56ba
gnu: Register new files.
...
* gnu/local.mk (GNU_SYSTEM_MODULES): Register gnu/packages/elixir-xyz.scm.
* Makefile.am (MODULES): Register guix/build-system/mix.scm,
guix/build/mix-build-system.scm.
Change-Id: I69c8fbaa6b16d658d5f6a43d1d39d680dd28ffe9
2023-12-18 08:20:18 +02:00
39009a8b30
gnu: go-1.14: Mark i586-gnu as unsupported.
...
* gnu/packages/golang.scm (go-1.14)[supported-systems]: Mark i586-gnu as
unsupported.
Change-Id: I226676e78e37047cf78ad185355dc4bff64e9d04
2023-12-18 08:14:16 +02:00
6e6ccef212
gnu: ci: Build tuned packages for common baselines.
...
* gnu/ci.scm (%x86-64-micro-architectures): Update the list of
micro-architectures to also match the psABI levels.
Change-Id: Iee2f65376a00ad2ee5fb393c2e64c07f866d8116
2023-12-18 08:14:16 +02:00
502bb9681b
gnu: Remove newsboat-2.13.
...
* gnu/packages/syndication.scm (newsboat-2.13): Delete variable.
Change-Id: I4453693485a45aee9ba93657624a6e7518808dc8
2023-12-18 08:14:16 +02:00
256d5b3598
Merge branch 'master' into wip-webkit
2023-12-18 03:58:23 +01:00
1a9f267f51
gnu: emacs-embark: Update to 1.0
...
* gnu/packages/emacs-xyx.scm (emacs-embark): Update to 1.0
Change-Id: I230bac996df9883a20c9f70e0b27f5bed37c91fa
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
9002b04e13
gnu: Add elixir-machete.
...
* gnu/packages/elixir-xyz.scm (elixir-machete): New variable.
Change-Id: I76e0fd78aeeaeaa94a297032b3b309846510c975
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
32de15206d
gnu: Add elixir-dialyxir.
...
* gnu/packages/elixir-xyz.scm (elixir-dialyxir): New variable.
Change-Id: I387062e0aaaded448022aa7534b95859b5979a06
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
43a74143ea
gnu: Add elixir-erlex.
...
* gnu/packages/elixir-xyz.scm (elixir-erlex): New variable.
Change-Id: Ia518ad5fd32d3f5942b20113e61e4ef7e7895ff3
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
d3410fb284
gnu: Add elixir-credo.
...
* gnu/packages/elixir-xyz.scm (elixir-credo): New variable.
Change-Id: I6df0d926e0fb96caa65d081892026b3495431c83
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
2060e3f5c8
gnu: Add elixir-excoveralls.
...
* gnu/packages/elixir-xyz.scm (elixir-excoveralls): New variable.
Change-Id: Ib271d8a7393e21178806df28ab892afe99757297
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
ab74b47e92
gnu: Add elixir-castore.
...
* gnu/packages/elixir-xyz.scm (elixir-castore): New variable.
Change-Id: Iea1fea8241d19ff35a183af9c3fbf2ed5198a259
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
20312bdf5b
gnu: Add elixir-inch-ex.
...
* gnu/packages/elixir-xyz.scm (elixir-inch-ex): New variable.
Change-Id: I6e98424528a0264a2587d28fcf065fa74eff0f1a
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
87e3f0b9b5
gnu: Add elixir-bunt.
...
* gnu/packages/elixir-xyz.scm (elixir-bunt): New variable.
Change-Id: Ib84797c31d6ab40d59b87b040993dae9391ead6b
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
e490763f27
gnu: Add elixir-file-system.
...
* gnu/packages/elixir-xyz.scm (elixir-file-system): New variable.
Change-Id: I54e9c9069ddf150bb0c882775b0b2c9d5e59abd6
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
4ee644f918
gnu: Add elixir-jason.
...
* gnu/packages/elixir-xyz.scm (elixir-jason): New variable.
Change-Id: Iadd816e2b5db6d146728aacb4d6b2c66aba4304c
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
be31d3f32f
gnu: Add elixir-makeup.
...
* gnu/packages/elixir-xyz.scm (elixir-makeup): New variable.
Change-Id: I21fe9ffddb4c95a2c67b74340b1105c2a54d3c82
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
303b9bd163
gnu: Add elixir-nimble-parsec.
...
* gnu/packages/elixir-xyz.scm (elixir-nimble-parsec): New variable.
Change-Id: I79bab8095aee3212bc295354ead55df49ef92d17
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
612f8afac1
gnu: Add elixir-hex.
...
* gnu/packages/elixir.scm (elixir-hex): New variable.
Change-Id: I957688ae4e078afd79acd439880c38083fdab83a
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
c2ed5a7d13
gnu: elixir: Wrap binaries.
...
* gnu/packages/elixir.scm (elixir)[#:phases]: Add ‘wrap-programs’.
[native-search-path]: Add “GUIX_ELIXIR_LIBS”.
Change-Id: I75bdde3aeedc1d495ea5fc2c5fc3fcdc5dc3fad2
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
7b826d5734
gnu: python-renpy: Update to 8.1.3.
...
* gnu/packages/game-development.scm (python-renpy): Update to 8.1.3.
Change-Id: I5e265cdc0f83eda9ae19a3627fa8cd69ef103806
2023-12-17 22:22:30 +01:00
0cfaf5654a
gnu: python-pygame-sdl2: Update to 2.1.0+renpy8.1.3.
...
* gnu/packages/game-development.scm (python-pygame-sdl2): Update to
2.1.0+renpy8.1.3.
Change-Id: Ide0baef4762b2c4174d10e07ec94427916ac41af
2023-12-17 22:22:30 +01:00
6ab242609d
gnu: guile-ares-rs: Update to 0.9.1.
...
* gnu/packages/guile-xyz.scm (guile-ares-rs): Update to 0.9.1.
2023-12-17 10:25:08 +03:00
fe86819d8b
gnu: linux-libre 4.14: Update to 4.14.333.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.333.
(linux-libre-4.14-pristine-source): Update hash.
Change-Id: I32f32f1ccb922f845d28dc84d2389bdf6636f839
2023-12-16 15:59:39 -05:00
15af10f69c
gnu: linux-libre 4.19: Update to 4.19.302.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.302.
(linux-libre-4.19-pristine-source): Update hash.
Change-Id: Ic8f6e5311ab9fc4c9adeb4f006fd9b2d7b501359
2023-12-16 15:59:39 -05:00
fd109a7dbb
gnu: linux-libre 5.4: Update to 5.4.264.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.264.
(linux-libre-5.4-pristine-source): Update hash.
Change-Id: Id263ea3c098e61b25794e403a4722824b37539f1
2023-12-16 15:59:39 -05:00
900e491fdb
gnu: linux-libre 5.10: Update to 5.10.204.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.204.
(linux-libre-5.10-pristine-source): Update hash.
Change-Id: Ibaeb98f2ea80724e95a40f6bb0478dec5b6ca3dc
2023-12-16 15:59:39 -05:00
ea550e71f3
gnu: linux-libre 5.15: Update to 5.15.143.
...
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.143.
(linux-libre-5.15-pristine-source): Update hash.
Change-Id: I7854728eb1cc38afa2fb1d8cfbd9463cf10ee8d8
2023-12-16 15:59:38 -05:00
833931c96d
gnu: linux-libre 6.1: Update to 6.1.68.
...
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.68.
(linux-libre-6.1-pristine-source): Update hash.
Change-Id: I23cb34828bc0f31333ea737e566ee68967ed965e
2023-12-16 15:59:38 -05:00
6467384d2a
gnu: linux-libre: Update to 6.6.7.
...
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.7.
(linux-libre-6.6-pristine-source): Update hash.
Change-Id: I72ffbc67e66f9e4330b87bb189b2a5d29abcdf0b
2023-12-16 15:59:38 -05:00
f061bc5ba3
gnu: python-msgpack-transitional: Update code comment.
...
* gnu/packages/python-xyz.scm (python-msgpack-transitional): Update comment.
Change-Id: I93afe78c40ac87c6e5147d286cf257ec9a8afd68
2023-12-16 15:26:26 -05:00
efb4620d7c
gnu: Remove python-msgpack-1.0.2.
...
This package is no longer used in Guix.
* gnu/packages/python-xyz.scm (python-msgpack-1.0.2): Remove variable.
Change-Id: I6216003e6312c5587ae3471ba9870865ee68f680
2023-12-16 15:26:26 -05:00
61138a18d5
gnu: Borg: Update to 1.2.7.
...
* gnu/packages/backup.scm (borg): Update to 1.2.7.
[inputs]: Replace python-msgpack-1.0.2 with python-msgpack.
Change-Id: I8529d737d90105f877f1c099f4b3afa9b0ed9fa8
2023-12-16 15:26:22 -05:00
ed9d47c6ae
gnu: fpc: Add support for aarch64-linux.
...
* gnu/packages/pascal.scm (fpc-bootstrap-aarch64): New variable.
(fpc)[arguments]: Add cases for aarch64-linux.
[native-inputs]: Add case for fpc-binary for aarch64-linux.
Change-Id: I03630f9b36c10636db23c00aaf8f72b9ddf2390d
2023-12-16 18:05:58 +02:00
617e3dd2ae
gnu: fpc: Add support for powerpc64le-linux.
...
* gnu/packages/pascal.scm (fpc-bootstrap-powerpc64le): New variable.
(fpc)[arguments]: Add cases for powerpc64le-linux.
[native-inputs]: Add case for fpc-binary for powerpc64le-linux.
Change-Id: I4f12003b35ef60764e7e25cc14aed7d243c6fe0f
2023-12-16 18:05:58 +02:00
2b501ed730
gnu: fpc: Add support for powerpc-linux.
...
* gnu/packages/pascal.scm (fpc-bootstrap-powerpc): New variable.
(fpc)[arguments]: Add cases for powerpc-linux.
[native-inputs]: Add case for fpc-binary for powerpc-linux.
Change-Id: I0d4d9dda9d4c8f70ff20031ab94f1dc439df88e2
2023-12-16 18:05:58 +02:00
1954a1e33d
gnu: fpc: Patch more dynamic-linker paths.
...
* gnu/packages/pascal.scm (fpc)[arguments]: Patch more paths to the
dynamic-linker in the 'configure phase.
Change-Id: I0eebf1271d24e22839db0a8fd96385408067fdbf
2023-12-16 18:05:57 +02:00
7b949bc318
gnu: fpc: Fix building on i686-linux.
...
* gnu/packages/pascal.scm (fpc)[source]: Add patch.
* gnu/packages/patches/fpc-glibc-2.34-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Change-Id: I6fde62de63171d7e16754b36db460f4073b1979d
2023-12-16 18:05:57 +02:00
e9e08b02b5
gnu: valgrind: Mark as unsupported on i586-gnu.
...
* gnu/packages/valgrind.scm (valgrind)[supported-systems]: Remove
i586-gnu from supported systems.
Change-Id: I260b9b343c30da81d0420c92431d56d22c260cc4
2023-12-16 18:05:57 +02:00
580a7cc5a9
gnu: valgrind: Use correct glibc.
...
* gnu/packages/valgrind.scm (valgrind/interactive)[inputs]: Replace
glibc with libc-for-target.
Change-Id: If8e428a12647c8aeb36fa90f36d7c8d12055f2b9
2023-12-16 18:05:54 +02:00
d5298c5e33
gnu: r-with-tests: Update to 4.3.2.
...
* gnu/packages/statistics.scm (r-with-tests): Update to 4.3.2.
Change-Id: Ifd949eb363582e533d629e573ea98c10edf127c3
2023-12-16 13:06:15 +01:00
9f6210cc5c
gnu: yelp: Build with webkitgtk-for-gtk3.
...
This replacement was omitted in f3da903b0169edc19e07be5a91c80488332abe09:
Yelp 42 still builds with GTK+ 3, so let's use the right Webkit.
* gnu/packages/gnome.scm (yelp)[inputs]: Replace webkitgtk with
webkitgtk-for-gtk3.
2023-12-16 02:11:07 +01:00
822befbcae
gnu: epiphany: Build with webkitgtk-for-gtk3.
...
This replacement was omitted in f3da903b0169edc19e07be5a91c80488332abe09:
Epiphany 42 still builds with GTK+ 3, so let's use the right Webkit.
* gnu/packages/gnome.scm (epiphany)[inputs]: Replace webkitgtk with
webkitgtk-for-gtk3.
2023-12-12 22:07:08 +01:00
38035705ed
gnu: inxi-minimal: Update to 3.3.31-2.
...
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.31-2.
Change-Id: I6645cdc0870396ef6726bed1e24af534a4e03503
2023-12-10 01:00:00 +01:00
a4bbe113ff
gnu: mediainfo: Update to 23.11.
...
* gnu/packages/video.scm (mediainfo): Update to 23.11.
Change-Id: Ife3dad58749d292c04d6b5cca8fb0eabf3a7a02a
2023-12-10 01:00:00 +01:00
ec7d33c108
gnu: libmediainfo: Update to 23.11.
...
* gnu/packages/video.scm (libmediainfo): Update to 23.11.
Change-Id: Id7967fb5ed1304055ddeea73b550bd9c5e7ec6ec
2023-12-10 01:00:00 +01:00
7a7b7c176f
gnu: iperf: Update to 3.16.
...
* gnu/packages/networking.scm (iperf): Update to 3.16.
Change-Id: I8463174ba4a0773ef62d3e888332a223cefad56e
2023-12-10 01:00:00 +01:00
92f179ab20
gnu: r-tximeta: Update to 1.20.1.
...
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.1.
Change-Id: Id29bdc8c00f957854ed5ba38c2cbbb91e04bbf78
2023-12-15 17:47:43 +01:00
e19a7ca446
gnu: r-biomvrcns: Update to 1.42.2.
...
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.42.2.
Change-Id: I956718d0ecb503546564434fbea82a886d4de9f4
2023-12-15 17:47:43 +01:00
5765ddc666
gnu: r-basilisk: Update to 1.14.1.
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* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.1.
Change-Id: I7c05a536a58ca7bc7d24fdb5f39a420611bebf45
2023-12-15 17:47:42 +01:00
32cd9f9993
gnu: r-basilisk-utils: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.14.1.
Change-Id: Icda5e71c0a709e2de4c6303774c37224a9476d62
2023-12-15 17:47:42 +01:00
1b5ffaa960
gnu: r-gviz: Update to 1.46.1.
...
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.46.1.
Change-Id: I10e68ee45be2cd2cddc217e75ee6667323c4dd57
2023-12-15 17:47:42 +01:00
280162165b
gnu: r-mscoreutils: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.14.1.
Change-Id: Ia978e23f1f0bf5a58ffa2c76a65c5f9982629aac
2023-12-15 17:47:42 +01:00
2f14829a7c
gnu: r-sparsearray: Update to 1.2.2.
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* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.2.
Change-Id: I96f367bf5c39c973e1c5fad3b9620bfcaf88417a
2023-12-15 17:47:41 +01:00
aa3e41026a
gnu: r-scater: Update to 1.30.1.
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* gnu/packages/bioconductor.scm (r-scater): Update to 1.30.1.
Change-Id: I5e497b654bc4a26adc6d956f728f31ae631a239c
2023-12-15 17:47:41 +01:00
2fb96bed75
gnu: r-s4vectors: Update to 0.40.2.
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* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.40.2.
Change-Id: I6201d17fa2a6be618feb26ad632b9249f87d86c5
2023-12-15 17:47:41 +01:00
ccf2d49837
gnu: r-ucell: Update to 2.6.2.
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* gnu/packages/bioconductor.scm (r-ucell): Update to 2.6.2.
Change-Id: Ie08960a237ad1515332794b23c2bd31e94299dfe
2023-12-15 17:47:41 +01:00
be56597c9d
gnu: r-variancepartition: Update to 1.32.2.
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* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.2.
[propagated-inputs]: Add r-matrixstats.
Change-Id: I436a1db36ad910aec0fac87150c62735f6509575
2023-12-15 17:47:41 +01:00
bb64a047b4
gnu: r-flowworkspace: Update to 4.14.1.
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* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.1.
Change-Id: I2e950e77842add2eebeeffac2492ba0ef1aa6422
2023-12-15 17:47:40 +01:00
2ab52103c9
gnu: r-xcms: Update to 4.0.1.
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* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.1.
Change-Id: I98dd730bb959d2483164177a3e534915d13fee44
2023-12-15 17:47:40 +01:00
e22fc284e3
gnu: r-genomicscores: Update to 2.14.2.
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* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.2.
Change-Id: I00417ef0c2f9657ec39690baa52a1cd075fb69c6
2023-12-15 17:47:40 +01:00
0d5917604c
gnu: r-dose: Update to 3.28.2.
...
* gnu/packages/bioconductor.scm (r-dose): Update to 3.28.2.
[propagated-inputs]: Remove r-hpo-db and r-mpo-db; add r-yulab-utils.
Change-Id: Ia29d318cac9b1e261fb89fc4d15f8b40ec3583f3
2023-12-15 17:47:40 +01:00
cff731dae5
gnu: r-lefser: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-lefser): Update to 1.12.1.
Change-Id: Iac94395b267e925116929d48abb3c28cff31504e
2023-12-15 17:47:39 +01:00
fcdd57e5fe
gnu: r-zellkonverter: Update to 1.12.1.
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* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.12.1.
Change-Id: I0db7450b3eff32e739ea3b806dde96114caba440
2023-12-15 17:47:39 +01:00
01f345225b
gnu: r-variantannotation: Update to 1.48.1.
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* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.48.1.
Change-Id: I51e6a6db61fc4782823f9a7f85345742b8c7ab72
2023-12-15 17:47:39 +01:00
69126c2b9c
gnu: r-trackviewer: Update to 1.38.1.
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* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.1.
Change-Id: I3ec74e7c37830e7a0b3b12311e304cc2e4fe322e
2023-12-15 17:47:39 +01:00
5a231ed554
gnu: r-tcgautils: Update to 1.22.2.
...
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.22.2.
Change-Id: I9c33a55076c672fa3a6ff6c97675dee16d186a39
2023-12-15 17:47:38 +01:00
27fab6cfee
gnu: r-rhdf5filters: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.14.1.
Change-Id: I260973b51c3a8e895339d1c4b6fbed8f66ccb50c
2023-12-15 17:47:38 +01:00
be49fe22cd
gnu: r-rhdf5: Update to 2.46.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.46.1.
Change-Id: Ia4781476ab82dd867a707e98767d8ee12d208003
2023-12-15 17:47:38 +01:00
0f499ab3b0
gnu: r-msnbase: Update to 2.28.1.
...
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.28.1.
Change-Id: I25fdd2662ab60939732cdee51fc2b53916f1d705
2023-12-15 17:47:38 +01:00
5883f6d17f
gnu: r-genomeinfodb: Update to 1.38.2.
...
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.2.
Change-Id: I17852db375cc7e833d100998c89751e68f3d4362
2023-12-15 17:47:38 +01:00
73e20717d0
gnu: r-edger: Update to 4.0.3.
...
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.3.
Change-Id: I97d73da131092effbf2404e710389d863ba39889
2023-12-15 17:47:37 +01:00
97d988cd23
gnu: r-champ: Update to 2.32.0.
...
* gnu/packages/bioconductor.scm (r-champ): Update to 2.32.0.
Change-Id: I2058a0c0b086452ccfae5ef84884aa0b9cf51abb
2023-12-15 17:47:37 +01:00
b77fe732f0
gnu: r-annotationdbi: Update to 1.64.1.
...
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.64.1.
Change-Id: If7f6bef70b3f4cc59c81ea68632b36c4b8449a73
2023-12-15 17:47:37 +01:00
96af9a059b
gnu: r-infercnv: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.18.1.
Change-Id: I99b0f17246ef267a58f87c1719066b1b4f198d8b
2023-12-15 17:47:37 +01:00
da79581a8f
gnu: r-dmrcate: Update to 2.16.1.
...
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 2.16.1.
[propagated-inputs]: Remove r-dss.
Change-Id: I183971826201b19cc88eb2768716aa2e165aba1f
2023-12-15 17:47:36 +01:00
ae4c47571e
gnu: r-degreport: Update to 1.38.5.
...
* gnu/packages/bioconductor.scm (r-degreport): Update to 1.38.5.
[propagated-inputs]: Add r-dendextend and r-stringi.
Change-Id: I73fe47489449b46406b879dba0318d02dc3c7614
2023-12-15 17:47:36 +01:00
3dc5ddb82a
gnu: r-cellid: Update to 1.10.1.
...
* gnu/packages/bioconductor.scm (r-cellid): Update to 1.10.1.
Change-Id: I74f0e39907eb293f84a2ee9d29ef5feab15b698a
2023-12-15 17:47:36 +01:00
f5f19ac400
gnu: r-biocversion: Update to 3.18.1.
...
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.18.1.
Change-Id: I844d321dc3716d2658ddd75a81d844f8b302af53
2023-12-15 17:47:35 +01:00
71c0e7eea6
gnu: r-bandits: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-bandits): Update to 1.18.1.
Change-Id: Ied13d156cb7762fd6f86a5a0cccff302b684530d
2023-12-15 17:47:35 +01:00
ea9441de8f
gnu: r-aseb: Update to 1.46.3.
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* gnu/packages/bioconductor.scm (r-aseb): Update to 1.46.3.
Change-Id: I7fb905224840f598261fceba67207cd71e7a73d9
2023-12-15 17:47:35 +01:00
2dc2636444
gnu: r-anvil: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.14.1.
Change-Id: I2ea83e4a11a1268f222201480563fe1c9ce1060b
2023-12-15 17:47:35 +01:00
dafbf36e1f
gnu: r-agimicrorna: Update to 2.52.0.
...
* gnu/packages/bioconductor.scm (r-agimicrorna): Update to 2.52.0.
Change-Id: I0f739590d115b5dc354833cdac2ba3c400ddd995
2023-12-15 17:47:35 +01:00
8341726732
gnu: r-rhdf5lib: Update to 1.24.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.24.1.
[propagated-inputs]: Add r-biocstyle and r-stringr.
[native-inputs]: Add r-rmarkdown.
Change-Id: I18c06543abee8e4a715f1ef120ce600562804225
2023-12-15 17:27:44 +01:00
c5f2535346
gnu: r-reportingtools: Update to 2.42.3.
...
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.42.3.
[source]: Adjust snippet.
[arguments]: Use minify-build-system in 'process-javascript phase.
[native-inputs]: Remove r-knitr; add r-rmarkdown.
Change-Id: I1c00e1a1d8095f40da29b57b8e82de493fcff26e
2023-12-15 17:25:58 +01:00
9013d47d5e
gnu: r-affycoretools: Update to 1.74.0.
...
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.74.0.
Change-Id: I4197d73e62477bb64182181229c8a33f3048406a
2023-12-15 16:52:00 +01:00
93597fc39c
gnu: pyscenic: Update to 0.11.2-1.5f170fd.
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* gnu/packages/bioinformatics.scm (pyscenic): Update to 0.11.2-1.5f170fd.
[build-system]: Use pyproject-build-system.
[arguments]: Patch setup.py.
[propagated-inputs]: Add python-pyarrow.
Change-Id: I3acd7c921c2c44741c0afd0bbda011f63ed14c42
2023-12-15 16:13:14 +01:00
46b1e717cf
gnu: python-ctxcore: Update to 0.2.0.
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* gnu/packages/bioinformatics.scm (python-ctxcore): Update to 0.2.0.
[build-system]: Use pyproject-build-system.
[propagated-inputs]: Replace python-pyarrow-0.16 with python-pyarrow.
Change-Id: I3f72f9872b438c0a624d23becb5d7828f1986da7
2023-12-15 16:13:14 +01:00
b2aa1d7cd0
gnu: r-readwriter: Update to 1.5.3-1.91373c4.
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* gnu/packages/bioinformatics.scm (r-readwriter): Update to 1.5.3-1.91373c4.
[propagated-inputs]: Remove r-gdata.
Change-Id: Ice16d3b07d7446ca864fd30e46110c9060b83081
2023-12-15 16:13:14 +01:00
07f85bb057
gnu: r-stringendo: Update to 0.6.0.
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* gnu/packages/bioinformatics.scm (r-stringendo): Update to 0.6.0.
[propagated-inputs]: Remove r-devtools and r-usethis; add r-clipr.
Change-Id: Iff4a841beb51558ba7d5d8e87ee56e7c3f2b2710
2023-12-15 16:13:14 +01:00
4d92caef51
gnu: r-liana: Add missing inputs.
...
* gnu/packages/bioinformatics.scm (r-liana)[propagated-inputs]: Add r-basilisk
and r-basilisk-utils.
Change-Id: I5dce058a446245e6797cca1c35485f38b3da819a
2023-12-15 16:13:14 +01:00
0ec25720ab
gnu: python-vaex-core: Add missing input.
...
* gnu/packages/python-science.scm (python-vaex-core)[propagated-inputs]: Add
python-click.
Change-Id: Id91e925832ed107d5b346ba513a9825dc31481f6
2023-12-15 16:13:14 +01:00
07acdb1552
gnu: r-desctools: Update to 0.99.52.
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* gnu/packages/statistics.scm (r-desctools): Update to 0.99.52.
[propagated-inputs]: Remove r-bh; add r-cli.
Change-Id: Idca54e4796494b1d5635412c8f15bf639383ee0a
2023-12-15 16:13:14 +01:00
3e17f2ff9c
gnu: r-bayesfactor: Update to 0.9.12-4.6.
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* gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.6.
Change-Id: Iac17532bb38081a536790af3c5a36ad4791905b9
2023-12-15 16:13:14 +01:00
53082f702d
gnu: r-cairo: Update to 1.6-2.
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* gnu/packages/statistics.scm (r-cairo): Update to 1.6-2.
Change-Id: I519f1bef619873d81c38b272251075b4c8c88c68
2023-12-15 16:13:14 +01:00
040c86f2c8
gnu: r-tclust: Update to 1.5-5.
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* gnu/packages/statistics.scm (r-tclust): Update to 1.5-5.
Change-Id: I8526d099efd09fc458deb4feb090eb83671549ea
2023-12-15 16:13:14 +01:00
541d828f97
gnu: r-robust: Update to 0.7-3.
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* gnu/packages/statistics.scm (r-robust): Update to 0.7-3.
Change-Id: Ia4908566898547b7d8d14138f776de78f8f4a9fd
2023-12-15 16:13:14 +01:00
01c7baaf43
gnu: r-pcapp: Update to 2.0-4.
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* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-4.
Change-Id: Ie0ad4cd7ddf9c649294f4ba76fc3aa6422f5e81c
2023-12-15 16:13:14 +01:00
a5df4d20ee
gnu: r-robustbase: Update to 0.99-1.
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* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-1.
Change-Id: I01fe9d9a24471eaa93439169ad197fbaf54a8446
2023-12-15 16:13:14 +01:00
45e59dae8f
gnu: r-mclust: Update to 6.0.1.
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* gnu/packages/statistics.scm (r-mclust): Update to 6.0.1.
Change-Id: Iabc63d21f904d92205db4364053537f580658af5
2023-12-15 16:13:14 +01:00
f7da625a37
gnu: r-diptest: Update to 0.77-0.
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* gnu/packages/statistics.scm (r-diptest): Update to 0.77-0.
Change-Id: Ic0dcd061fc82a6ef5bc4eb9d222245c00052e0aa
2023-12-15 16:13:14 +01:00
c5e8b34bde
gnu: r-fastica: Update to 1.2-4.
...
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-4.
Change-Id: Ia0f61d080891317f825837e42aee70e94eff83dc
2023-12-15 16:13:14 +01:00
f2041fe211
gnu: r-ggthemes: Update to 5.0.0.
...
* gnu/packages/statistics.scm (r-ggthemes): Update to 5.0.0.
[propagated-inputs]: Add r-lifecycle.
Change-Id: Ie190e236dd4bfc951725535774071eea60488ce8
2023-12-15 16:13:14 +01:00
b21ed00b81
gnu: r-gtools: Update to 3.9.5.
...
* gnu/packages/statistics.scm (r-gtools): Update to 3.9.5.
Change-Id: I99642b15227fa007cfd86dc378afdd5f54d4567f
2023-12-15 16:13:13 +01:00
9592148434
gnu: r-mvtnorm: Update to 1.2-4.
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* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-4.
Change-Id: I3d40983459a474bea7e19809b3c030672d2ff0bc
2023-12-15 16:13:13 +01:00
e7c61edc2f
gnu: r-r-utils: Update to 2.12.3.
...
* gnu/packages/statistics.scm (r-r-utils): Update to 2.12.3.
Change-Id: Ia0e99369dce4fd9aae06dac10b2ce7ba3906fc5a
2023-12-15 16:13:13 +01:00
d17289bad2
gnu: r-e1071: Update to 1.7-14.
...
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-14.
Change-Id: Ib5fec1c275936a335e612e65f417d92dadc8a972
2023-12-15 16:13:13 +01:00
e1a846a257
gnu: r-rtsne: Update to 0.17.
...
* gnu/packages/statistics.scm (r-rtsne): Update to 0.17.
Change-Id: Ida34d5e8ee0ac9eb12e90bfd7c620f527113b0a4
2023-12-15 16:13:13 +01:00
a7e3473c9b
gnu: r-segmented: Update to 2.0-0.
...
* gnu/packages/statistics.scm (r-segmented): Update to 2.0-0.
Change-Id: I879ef86dfaf80f8dbabdae18136c2524dbbea11b
2023-12-15 16:13:13 +01:00
cdf28e5e11
gnu: r-xml: Update to 3.99-0.16.
...
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.16.
Change-Id: Ic0dd6c2146f73b7add5038d469c1eeda9713b3f2
2023-12-15 16:13:13 +01:00
00594a76e1
gnu: r-rsqlite: Update to 2.3.4.
...
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.4.
[propagated-inputs]: Add r-rlang.
Change-Id: Id2ab593e43b30470fe51dbe1c516611770752967
2023-12-15 16:13:13 +01:00
Maxim Cournoyer
Aaron Covrig
Wilko Meyer
Leo Famulari
Zheng Junjie
Ricardo Wurmus
Adam Faiz
Felix Gruber
Guillaume Le Vaillant
Paul A. Patience
David Thompson
Clément Lassieur
Troy Figiel
Timotej Lazar
Mathieu Othacehe
Nicolas Graves
Josselin Poiret
Efraim Flashner
Brian Cully
Romain GARBAGE
Sharlatan Hellseher
Jaeme Sifat
Spencer King
Feng Shu
Greg Hogan
Leo Nikkilä
Herman Rimm
Nguyễn Gia Phong
Rikard Nordgren
Andy Tai
TakeV
Zhu Zihao
Christopher Baines
Hilton Chain
Daniel Ziltener
Ludovic Courtès
Jack Hill
Benjamin Slade
Mădălin Ionel Patrașcu
Bruno Victal
Michael Ford
Oleg Pykhalov
Mark H Weaver
spacecadet@purge.sh
Ekaitz Zarraga
Saku Laesvuori
nafkhamdc
antlers
Liliana Marie Prikler
Pierre-Henry Fröhring
Pierre-Henry Fröhring
Andrew Tropin
Tobias Geerinckx-Rice