2cc881ac13
tests: jami: Double timeouts.
...
* gnu/tests/telephony.scm (run-jami-test): Pass #:timeout to
‘wait-for-service’. Double number passed to ‘with-retries’.
Change-Id: Ib3c81a770c2d52b2eb40e4f28abc8e33f5c71fc8
2023-12-22 00:31:41 +01:00
204f08c43e
tests: jami: Check status of Jami D-Bus session.
...
* gnu/tests/telephony.scm (run-jami-test)["dbus session is up"]: New
test.
Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Change-Id: Ifa9b57c732f3c64e1ec6bf3028b69a57cee56320
2023-12-22 00:31:41 +01:00
d3ffa06a4d
services: bitlbee: Remove use of ‘make-forkexec-constructor/container’.
...
This will only affect systems running Shepherd < 0.9.0, which was
released in August 2022.
* gnu/services/messaging.scm (bitlbee-shepherd-service): Remove
‘with-imported-modules’ and ‘modules’ field. Use
‘make-forkexec-constructor’ instead of
‘make-forkexec-constructor/container’ when ‘make-inetd-constructor’ is
missing.
Change-Id: I35a0487bccaee4799ad0d81388d540e5c7891f7e
2023-12-22 00:31:41 +01:00
bcad46cde6
services: pagekite: Add ‘configuration’ action.
...
* gnu/services/networking.scm (pagekite-shepherd-service): Add ‘actions’
field.
Change-Id: I04daa846d505b0700b574a82472ecd99b492d7c4
2023-12-22 00:31:41 +01:00
43acd98e41
services: pagekite: Use ‘least-authority-wrapper’.
...
* gnu/services/networking.scm (pagekite-shepherd-service): Define
‘config-file’ and ‘mappings’; define ‘pagekite’ in terms of
‘least-authority-wrapper’. Remove now-unneeded ‘with-imported-modules’
form and ‘modules’ field. Use ‘make-forkexec-constructor’ instead of
‘make-forkexec-constructor/container’.
Change-Id: I7c6c6266785f6a0f81a69d85f070779a0d6edd91
2023-12-22 00:31:40 +01:00
04b63ea195
gnu: openssh: Update to 9.6p1 [security-fixes].
...
Fixes CVE-2023-48795.
* gnu/packages/ssh.scm (openssh): Update to 9.6p1.
[arguments]<#:parallel-tests?>: Disable.
Change-Id: I8b7707894d904ec8bcccb943908fff2e69a1a027
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
2023-12-21 12:34:56 -05:00
97e517a568
gnu: libssh: Update to 0.10.6 [security-fixes].
...
Fixes CVE-2023-6004, CVE-2023-48795, and CVE-2023-6918.
* gnu/packages/ssh.scm (libssh): Update to 0.10.6.
Change-Id: Ie9d304d78b2629f41af9836e5c7eab5df6f26bb5
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
2023-12-21 12:30:15 -05:00
49a7a95ba4
gnu: Syncthing: Update to 1.27.1.
...
* gnu/packages/syncthing.scm (syncthing): Update to 1.27.1.
Signed-off-by: Leo Famulari <leo@famulari.name>
Change-Id: Ib95828dee7b2b8b5f852a47026f3bbff69361329
2023-12-20 19:09:15 -05:00
2b12c1238c
gnu: Add r-ncmisc.
...
* gnu/packages/cran.scm (r-ncmisc): New variable.
Change-Id: I54bbaf23244767bdb7cce9f31e604ba6998448a4
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-12-20 11:40:57 +01:00
9dbb618a80
gnu: i2pd: Update to 2.50.0.
...
* gnu/packages/i2p.scm (i2pd): Update to 2.50.0.
[native-inputs]: Add pkg-config, check.
[arguments]: Use G-Expressions.
<#:configure-flags>: Drop obsolete and defaulted flags. Enable testing with
cmake.
<#:phases>: Drop obsolete 'check replacement.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: If276d475587fa9431fbb9b55b051e71a2f5d39e3
2023-12-20 11:05:55 +01:00
51c0490267
gnu: bitcoin-core: Update to 26.0.
...
* gnu/packages/finance.scm (bitcoin-core): Update to 26.0.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: Ied4b14221f862e05f37fc0516392d1b474bc6d19
2023-12-20 10:42:23 +01:00
4af710b2ea
gnu: Add obs-pipewire-audio-capture.
...
* gnu/packages/video.scm (obs-pipewire-audio-capture): New variable.
Change-Id: I6f8e400a8ec81b84c65d948b6c30d41d74bd5dca
2023-12-20 11:46:40 +03:00
352594e812
gnu: icecat: Update to 115.6.0-guix0-preview1 [security fixes].
...
Includes fixes for CVE-2023-6856, CVE-2023-6857, CVE-2023-6858,
CVE-2023-6859, CVE-2023-6860, CVE-2023-6861, CVE-2023-6862,
CVE-2023-6863, CVE-2023-6864, CVE-2023-6865, and CVE-2023-6867.
* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2023-12-20 02:19:05 -05:00
dc2b59ddc1
gnu: axoloti-patcher: Remove trailing #T.
...
* gnu/packages/axoloti.scm (axoloti-patcher)[arguments]: Remove trailing #T
from build phase.
Change-Id: I1a741e41e7ae167cd72542c3f9cf9a13046bcd3c
2023-12-20 01:00:45 +01:00
1adf1e36d2
gnu: axoloti-patcher: Fix include paths.
...
* gnu/packages/axoloti.scm (axoloti-patcher)[arguments]: Add missing "c++"
sub-directory to search paths.
Change-Id: Ia3297cb24e02f92ad7af40881b9021af25093e67
2023-12-20 01:00:45 +01:00
a512bbd23a
gnu: ovmf: Set target to #f.
...
* gnu/packages/firmware.scm (ovmf)[arguments]: Set target to #f.
Change-Id: Iee1b731977f2731277d2e907ee2db2ad85af195f
2023-12-19 16:27:13 +02:00
d542593092
gnu: Add ovmf-riscv64.
...
* gnu/packages/firmware.scm (ovmf-riscv64): New variable.
Change-Id: I483bc4496d7874cc0e9983de36cfc7a90ef7591c
2023-12-19 16:27:13 +02:00
7a7ba2d075
gnu: ovmf: Build with newer gcc.
...
* gnu/packages/firmware.scm (ovmf)[arguments]: Remove 'hide-implicit-gcc
phase.
[native-inputs]: Remove gcc-5.
Change-Id: I2bcaea77019bb69214878713aa57cbef49c473db
2023-12-19 16:27:13 +02:00
edb794bbd4
gnu: ovmf-arm: Update to use GCC5.
...
* gnu/packages/firmware.scm (ovmf-arm): Updating OVMF to 202308 requires
GCC5, packages inheriting from ovmf also need to be updated.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: I3a7b3f450e0da39129e7cffce7482b8e391e3858
2023-12-19 16:27:13 +02:00
c67e8c12d8
gnu: ovmf-aarch64: Update to use GCC5.
...
* gnu/packages/firmware.scm (ovmf-aarch64): Updating OVMF to 202308
requires GCC5, packages inheriting from ovmf also need to be updated.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Iccd674f82c2f0160fa8097a09d10154be9736042
2023-12-19 16:27:13 +02:00
1c9908fad5
gnu: ovmf: Add OVMF_CODE and OVMF_VARS files.
...
* gnu/packages/firmware.scm (ovmf)[arguments]: Add OVMF_CODE.fd and
OVMF_VARS.fs to outputs as ovmf_code_arch.bin and ovmf_vars_arch.bin,
respectively, for both ia32 and x64 architectures.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Ie329f3f3515e7d015d9fbad01b8c2b82dc7da76e
2023-12-19 16:27:11 +02:00
57aaaf2903
gnu: ovmf: Update to 202308.
...
* gnu/packages/firmware.scm (ovmf): Update to 202308.
[arguments]: Adjust phases to not hardcode gcc toolchain version.
[native-inputs]: Remove python-2. Add perl, python-3.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: I74a7bd26240821aacf35e5020d9687406e7da9ed
2023-12-19 16:26:33 +02:00
aa373871cf
gnu: qemu: Update to 8.1.3.
...
* gnu/packages/virtualization.scm (qemu): Update to 8.1.3.
Change-Id: I9e9e90b836a0307637ead5893594b20d6850fe90
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-19 16:22:02 +02:00
8c07a2c2ba
gnu: composer-classloader: Use copy-build-system.
...
* gnu/packages/php-xyz.scm (composer-classloader)[build-system]: Switch
to the copy-build-system.
[arguments]: Adjust accordingly.
Change-Id: Idb39ba92d973362bd6d8c1dd944a5d46919de5df
2023-12-19 16:21:24 +02:00
fa92a7c2fe
gnu: font-jetbrains-mono: Use the correct license.
...
The build scripts are licensed under asl2.0 but the packaged font files
are licensed under silofl1.1.
* gnu/packages/fonts.scm (font-jetbrains-mono)[license]: Use silofl1.1
instead of asl2.0.
Change-Id: I256a89b6e4bdb368c9cc94cae0808f72c76e7599
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:48 +08:00
96f704548c
gnu: font-jetbrains-mono: Update to 2.304
...
* gnu/packages/fonts.scm (font-jetbrains-mono): Update to version 2.304.
Change-Id: Id325fda8f9b50cf830107823c6ca1b439a6bdca0
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:42 +08:00
04c9af0b00
gnu: traceroute: Update to 2.1.5.
...
* gnu/packages/networking.scm (traceroute): Update to 2.1.5.
Change-Id: I400292cd62afd76ca66e00071ae3afa45302735c
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:37 +08:00
dfc950689f
gnu: wireplumber: Update to 0.4.17.
...
* gnu/packages/linux.scm (wireplumber): Update to 0.4.17.
Change-Id: I1cdc156fde4cbbe6201f967db0701bb5dfdf1d7e
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:32 +08:00
d9c8432cb1
gnu: hyfetch: Update to 1.4.11.
...
* gnu/packages/admin.scm (hyfetch): Update to 1.4.11.
Change-Id: I244020ef556911107040e913ef76932ed97ae6e9
Signed-off-by: Hilton Chain <hako@ultrarare.space>
2023-12-19 21:48:27 +08:00
491ca36e32
gnu: emacs-mbsync: Update to 0.1.2-5.d3c81da.
...
* gnu/packages/emacs-xyz.scm (emacs-mbsync): Update to 0.1.2-5.d3c81da.
Change-Id: Idf9a1807a2bdfec8bb12f6eee90c6ee12ca29877
2023-12-19 21:48:22 +08:00
6884770464
gnu: Add iptables-nft.
...
* gnu/packages/linux.scm (iptables-nft): New variable.
Change-Id: I281514fcf05e70b4d62f374269c50c76bb676f78
2023-12-19 21:48:17 +08:00
521247658f
gnu: r-sccustomize: Update to 2.0.1-1.3973745.
...
* gnu/packages/bioinformatics.scm (r-sccustomize): Update to 2.0.1-1.3973745.
Change-Id: I4e4b499a658eaed0396263d1d9fd277a541a13d9
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-12-19 14:44:13 +01:00
bed9103579
gnu: guile-udev: Fix dlopen error at run time.
...
* gnu/packages/guile-xyz.scm (guile-udev)
[arguments]: Add patch-extension-path phase.
Change-Id: I4620c234e8ac45dcc1c2a3ab8871b8ab9d9c35c0
2023-12-19 00:36:30 -05:00
9dab758791
build-system: Add ‘composer-build-system’.
...
* guix/build-system/composer.scm: New file.
* guix/build/composer-build-system.scm: New file.
* gnu/packages/aux-files/findclass.php: New file.
* Makefile.am: Add them.
* doc/guix.texi (Build Systems): Document it.
Co-authored-by: Julien Lepiller <julien@lepiller.eu>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Change-Id: Ie6a05b42ff04d3ad774a0a20278a77e4820bb8f6
2023-12-18 23:16:55 +01:00
e8fd78d54e
gnu: Add composer-classloader.
...
* gnu/packages/php-xyz.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-18 23:16:28 +01:00
0a99d3a79d
gnu: zfs: Update to 2.1.14.
...
* gnu/packages/file-systems.scm (zfs): Update to 2.1.14.
Change-Id: I696467868924f1135ba678e8e743955d3767618f
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-18 21:10:38 +02:00
e84e33654c
gnu: ublock-origin: Update to 1.54.0.
...
* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.54.0.
(ublock-main-assets): Update to 76bd7cb53036a36f7e7df5ee9173f588ba8aa966.
(ublock-prod-assets): Update to a379a168fc149ffbd6d10cd0700d4ab4801e57f2.
Change-Id: I0296b45b684562afaef859b0144c875ff05cd2d8
2023-12-18 18:19:19 +01:00
29c94dd522
gnu: freeimage: Patch 2 CVEs.
...
* gnu/packages/image.scm (freeimage)[source]: Add patches.
* gnu/packages/patches/freeimage-CVE-2020-21428.patch,
gnu/packages/patches/freeimage-CVE-2020-22524.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
Change-Id: Iec114f2295cafbc8b55e81c0d8e4a361fd653152
2023-12-18 13:03:36 +02:00
f410d49eb2
Merge branch 'wip-webkit'
2023-12-18 09:29:48 +01:00
59f60f56ba
gnu: Register new files.
...
* gnu/local.mk (GNU_SYSTEM_MODULES): Register gnu/packages/elixir-xyz.scm.
* Makefile.am (MODULES): Register guix/build-system/mix.scm,
guix/build/mix-build-system.scm.
Change-Id: I69c8fbaa6b16d658d5f6a43d1d39d680dd28ffe9
2023-12-18 08:20:18 +02:00
39009a8b30
gnu: go-1.14: Mark i586-gnu as unsupported.
...
* gnu/packages/golang.scm (go-1.14)[supported-systems]: Mark i586-gnu as
unsupported.
Change-Id: I226676e78e37047cf78ad185355dc4bff64e9d04
2023-12-18 08:14:16 +02:00
6e6ccef212
gnu: ci: Build tuned packages for common baselines.
...
* gnu/ci.scm (%x86-64-micro-architectures): Update the list of
micro-architectures to also match the psABI levels.
Change-Id: Iee2f65376a00ad2ee5fb393c2e64c07f866d8116
2023-12-18 08:14:16 +02:00
502bb9681b
gnu: Remove newsboat-2.13.
...
* gnu/packages/syndication.scm (newsboat-2.13): Delete variable.
Change-Id: I4453693485a45aee9ba93657624a6e7518808dc8
2023-12-18 08:14:16 +02:00
256d5b3598
Merge branch 'master' into wip-webkit
2023-12-18 03:58:23 +01:00
1a9f267f51
gnu: emacs-embark: Update to 1.0
...
* gnu/packages/emacs-xyx.scm (emacs-embark): Update to 1.0
Change-Id: I230bac996df9883a20c9f70e0b27f5bed37c91fa
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
9002b04e13
gnu: Add elixir-machete.
...
* gnu/packages/elixir-xyz.scm (elixir-machete): New variable.
Change-Id: I76e0fd78aeeaeaa94a297032b3b309846510c975
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
32de15206d
gnu: Add elixir-dialyxir.
...
* gnu/packages/elixir-xyz.scm (elixir-dialyxir): New variable.
Change-Id: I387062e0aaaded448022aa7534b95859b5979a06
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
43a74143ea
gnu: Add elixir-erlex.
...
* gnu/packages/elixir-xyz.scm (elixir-erlex): New variable.
Change-Id: Ia518ad5fd32d3f5942b20113e61e4ef7e7895ff3
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
d3410fb284
gnu: Add elixir-credo.
...
* gnu/packages/elixir-xyz.scm (elixir-credo): New variable.
Change-Id: I6df0d926e0fb96caa65d081892026b3495431c83
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
2060e3f5c8
gnu: Add elixir-excoveralls.
...
* gnu/packages/elixir-xyz.scm (elixir-excoveralls): New variable.
Change-Id: Ib271d8a7393e21178806df28ab892afe99757297
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
ab74b47e92
gnu: Add elixir-castore.
...
* gnu/packages/elixir-xyz.scm (elixir-castore): New variable.
Change-Id: Iea1fea8241d19ff35a183af9c3fbf2ed5198a259
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
20312bdf5b
gnu: Add elixir-inch-ex.
...
* gnu/packages/elixir-xyz.scm (elixir-inch-ex): New variable.
Change-Id: I6e98424528a0264a2587d28fcf065fa74eff0f1a
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
87e3f0b9b5
gnu: Add elixir-bunt.
...
* gnu/packages/elixir-xyz.scm (elixir-bunt): New variable.
Change-Id: Ib84797c31d6ab40d59b87b040993dae9391ead6b
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
e490763f27
gnu: Add elixir-file-system.
...
* gnu/packages/elixir-xyz.scm (elixir-file-system): New variable.
Change-Id: I54e9c9069ddf150bb0c882775b0b2c9d5e59abd6
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
4ee644f918
gnu: Add elixir-jason.
...
* gnu/packages/elixir-xyz.scm (elixir-jason): New variable.
Change-Id: Iadd816e2b5db6d146728aacb4d6b2c66aba4304c
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
be31d3f32f
gnu: Add elixir-makeup.
...
* gnu/packages/elixir-xyz.scm (elixir-makeup): New variable.
Change-Id: I21fe9ffddb4c95a2c67b74340b1105c2a54d3c82
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
303b9bd163
gnu: Add elixir-nimble-parsec.
...
* gnu/packages/elixir-xyz.scm (elixir-nimble-parsec): New variable.
Change-Id: I79bab8095aee3212bc295354ead55df49ef92d17
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:31 +01:00
612f8afac1
gnu: Add elixir-hex.
...
* gnu/packages/elixir.scm (elixir-hex): New variable.
Change-Id: I957688ae4e078afd79acd439880c38083fdab83a
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
c2ed5a7d13
gnu: elixir: Wrap binaries.
...
* gnu/packages/elixir.scm (elixir)[#:phases]: Add ‘wrap-programs’.
[native-search-path]: Add “GUIX_ELIXIR_LIBS”.
Change-Id: I75bdde3aeedc1d495ea5fc2c5fc3fcdc5dc3fad2
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-17 22:22:30 +01:00
7b826d5734
gnu: python-renpy: Update to 8.1.3.
...
* gnu/packages/game-development.scm (python-renpy): Update to 8.1.3.
Change-Id: I5e265cdc0f83eda9ae19a3627fa8cd69ef103806
2023-12-17 22:22:30 +01:00
0cfaf5654a
gnu: python-pygame-sdl2: Update to 2.1.0+renpy8.1.3.
...
* gnu/packages/game-development.scm (python-pygame-sdl2): Update to
2.1.0+renpy8.1.3.
Change-Id: Ide0baef4762b2c4174d10e07ec94427916ac41af
2023-12-17 22:22:30 +01:00
6ab242609d
gnu: guile-ares-rs: Update to 0.9.1.
...
* gnu/packages/guile-xyz.scm (guile-ares-rs): Update to 0.9.1.
2023-12-17 10:25:08 +03:00
fe86819d8b
gnu: linux-libre 4.14: Update to 4.14.333.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.333.
(linux-libre-4.14-pristine-source): Update hash.
Change-Id: I32f32f1ccb922f845d28dc84d2389bdf6636f839
2023-12-16 15:59:39 -05:00
15af10f69c
gnu: linux-libre 4.19: Update to 4.19.302.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.302.
(linux-libre-4.19-pristine-source): Update hash.
Change-Id: Ic8f6e5311ab9fc4c9adeb4f006fd9b2d7b501359
2023-12-16 15:59:39 -05:00
fd109a7dbb
gnu: linux-libre 5.4: Update to 5.4.264.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.264.
(linux-libre-5.4-pristine-source): Update hash.
Change-Id: Id263ea3c098e61b25794e403a4722824b37539f1
2023-12-16 15:59:39 -05:00
900e491fdb
gnu: linux-libre 5.10: Update to 5.10.204.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.204.
(linux-libre-5.10-pristine-source): Update hash.
Change-Id: Ibaeb98f2ea80724e95a40f6bb0478dec5b6ca3dc
2023-12-16 15:59:39 -05:00
ea550e71f3
gnu: linux-libre 5.15: Update to 5.15.143.
...
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.143.
(linux-libre-5.15-pristine-source): Update hash.
Change-Id: I7854728eb1cc38afa2fb1d8cfbd9463cf10ee8d8
2023-12-16 15:59:38 -05:00
833931c96d
gnu: linux-libre 6.1: Update to 6.1.68.
...
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.68.
(linux-libre-6.1-pristine-source): Update hash.
Change-Id: I23cb34828bc0f31333ea737e566ee68967ed965e
2023-12-16 15:59:38 -05:00
6467384d2a
gnu: linux-libre: Update to 6.6.7.
...
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.7.
(linux-libre-6.6-pristine-source): Update hash.
Change-Id: I72ffbc67e66f9e4330b87bb189b2a5d29abcdf0b
2023-12-16 15:59:38 -05:00
f061bc5ba3
gnu: python-msgpack-transitional: Update code comment.
...
* gnu/packages/python-xyz.scm (python-msgpack-transitional): Update comment.
Change-Id: I93afe78c40ac87c6e5147d286cf257ec9a8afd68
2023-12-16 15:26:26 -05:00
efb4620d7c
gnu: Remove python-msgpack-1.0.2.
...
This package is no longer used in Guix.
* gnu/packages/python-xyz.scm (python-msgpack-1.0.2): Remove variable.
Change-Id: I6216003e6312c5587ae3471ba9870865ee68f680
2023-12-16 15:26:26 -05:00
61138a18d5
gnu: Borg: Update to 1.2.7.
...
* gnu/packages/backup.scm (borg): Update to 1.2.7.
[inputs]: Replace python-msgpack-1.0.2 with python-msgpack.
Change-Id: I8529d737d90105f877f1c099f4b3afa9b0ed9fa8
2023-12-16 15:26:22 -05:00
ed9d47c6ae
gnu: fpc: Add support for aarch64-linux.
...
* gnu/packages/pascal.scm (fpc-bootstrap-aarch64): New variable.
(fpc)[arguments]: Add cases for aarch64-linux.
[native-inputs]: Add case for fpc-binary for aarch64-linux.
Change-Id: I03630f9b36c10636db23c00aaf8f72b9ddf2390d
2023-12-16 18:05:58 +02:00
617e3dd2ae
gnu: fpc: Add support for powerpc64le-linux.
...
* gnu/packages/pascal.scm (fpc-bootstrap-powerpc64le): New variable.
(fpc)[arguments]: Add cases for powerpc64le-linux.
[native-inputs]: Add case for fpc-binary for powerpc64le-linux.
Change-Id: I4f12003b35ef60764e7e25cc14aed7d243c6fe0f
2023-12-16 18:05:58 +02:00
2b501ed730
gnu: fpc: Add support for powerpc-linux.
...
* gnu/packages/pascal.scm (fpc-bootstrap-powerpc): New variable.
(fpc)[arguments]: Add cases for powerpc-linux.
[native-inputs]: Add case for fpc-binary for powerpc-linux.
Change-Id: I0d4d9dda9d4c8f70ff20031ab94f1dc439df88e2
2023-12-16 18:05:58 +02:00
1954a1e33d
gnu: fpc: Patch more dynamic-linker paths.
...
* gnu/packages/pascal.scm (fpc)[arguments]: Patch more paths to the
dynamic-linker in the 'configure phase.
Change-Id: I0eebf1271d24e22839db0a8fd96385408067fdbf
2023-12-16 18:05:57 +02:00
7b949bc318
gnu: fpc: Fix building on i686-linux.
...
* gnu/packages/pascal.scm (fpc)[source]: Add patch.
* gnu/packages/patches/fpc-glibc-2.34-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Change-Id: I6fde62de63171d7e16754b36db460f4073b1979d
2023-12-16 18:05:57 +02:00
e9e08b02b5
gnu: valgrind: Mark as unsupported on i586-gnu.
...
* gnu/packages/valgrind.scm (valgrind)[supported-systems]: Remove
i586-gnu from supported systems.
Change-Id: I260b9b343c30da81d0420c92431d56d22c260cc4
2023-12-16 18:05:57 +02:00
580a7cc5a9
gnu: valgrind: Use correct glibc.
...
* gnu/packages/valgrind.scm (valgrind/interactive)[inputs]: Replace
glibc with libc-for-target.
Change-Id: If8e428a12647c8aeb36fa90f36d7c8d12055f2b9
2023-12-16 18:05:54 +02:00
d5298c5e33
gnu: r-with-tests: Update to 4.3.2.
...
* gnu/packages/statistics.scm (r-with-tests): Update to 4.3.2.
Change-Id: Ifd949eb363582e533d629e573ea98c10edf127c3
2023-12-16 13:06:15 +01:00
9f6210cc5c
gnu: yelp: Build with webkitgtk-for-gtk3.
...
This replacement was omitted in f3da903b0169edc19e07be5a91c80488332abe09:
Yelp 42 still builds with GTK+ 3, so let's use the right Webkit.
* gnu/packages/gnome.scm (yelp)[inputs]: Replace webkitgtk with
webkitgtk-for-gtk3.
2023-12-16 02:11:07 +01:00
822befbcae
gnu: epiphany: Build with webkitgtk-for-gtk3.
...
This replacement was omitted in f3da903b0169edc19e07be5a91c80488332abe09:
Epiphany 42 still builds with GTK+ 3, so let's use the right Webkit.
* gnu/packages/gnome.scm (epiphany)[inputs]: Replace webkitgtk with
webkitgtk-for-gtk3.
2023-12-12 22:07:08 +01:00
38035705ed
gnu: inxi-minimal: Update to 3.3.31-2.
...
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.31-2.
Change-Id: I6645cdc0870396ef6726bed1e24af534a4e03503
2023-12-10 01:00:00 +01:00
a4bbe113ff
gnu: mediainfo: Update to 23.11.
...
* gnu/packages/video.scm (mediainfo): Update to 23.11.
Change-Id: Ife3dad58749d292c04d6b5cca8fb0eabf3a7a02a
2023-12-10 01:00:00 +01:00
ec7d33c108
gnu: libmediainfo: Update to 23.11.
...
* gnu/packages/video.scm (libmediainfo): Update to 23.11.
Change-Id: Id7967fb5ed1304055ddeea73b550bd9c5e7ec6ec
2023-12-10 01:00:00 +01:00
7a7b7c176f
gnu: iperf: Update to 3.16.
...
* gnu/packages/networking.scm (iperf): Update to 3.16.
Change-Id: I8463174ba4a0773ef62d3e888332a223cefad56e
2023-12-10 01:00:00 +01:00
92f179ab20
gnu: r-tximeta: Update to 1.20.1.
...
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.1.
Change-Id: Id29bdc8c00f957854ed5ba38c2cbbb91e04bbf78
2023-12-15 17:47:43 +01:00
e19a7ca446
gnu: r-biomvrcns: Update to 1.42.2.
...
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.42.2.
Change-Id: I956718d0ecb503546564434fbea82a886d4de9f4
2023-12-15 17:47:43 +01:00
5765ddc666
gnu: r-basilisk: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.1.
Change-Id: I7c05a536a58ca7bc7d24fdb5f39a420611bebf45
2023-12-15 17:47:42 +01:00
32cd9f9993
gnu: r-basilisk-utils: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.14.1.
Change-Id: Icda5e71c0a709e2de4c6303774c37224a9476d62
2023-12-15 17:47:42 +01:00
1b5ffaa960
gnu: r-gviz: Update to 1.46.1.
...
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.46.1.
Change-Id: I10e68ee45be2cd2cddc217e75ee6667323c4dd57
2023-12-15 17:47:42 +01:00
280162165b
gnu: r-mscoreutils: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.14.1.
Change-Id: Ia978e23f1f0bf5a58ffa2c76a65c5f9982629aac
2023-12-15 17:47:42 +01:00
2f14829a7c
gnu: r-sparsearray: Update to 1.2.2.
...
* gnu/packages/bioconductor.scm (r-sparsearray): Update to 1.2.2.
Change-Id: I96f367bf5c39c973e1c5fad3b9620bfcaf88417a
2023-12-15 17:47:41 +01:00
aa3e41026a
gnu: r-scater: Update to 1.30.1.
...
* gnu/packages/bioconductor.scm (r-scater): Update to 1.30.1.
Change-Id: I5e497b654bc4a26adc6d956f728f31ae631a239c
2023-12-15 17:47:41 +01:00
2fb96bed75
gnu: r-s4vectors: Update to 0.40.2.
...
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.40.2.
Change-Id: I6201d17fa2a6be618feb26ad632b9249f87d86c5
2023-12-15 17:47:41 +01:00
ccf2d49837
gnu: r-ucell: Update to 2.6.2.
...
* gnu/packages/bioconductor.scm (r-ucell): Update to 2.6.2.
Change-Id: Ie08960a237ad1515332794b23c2bd31e94299dfe
2023-12-15 17:47:41 +01:00
be56597c9d
gnu: r-variancepartition: Update to 1.32.2.
...
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.32.2.
[propagated-inputs]: Add r-matrixstats.
Change-Id: I436a1db36ad910aec0fac87150c62735f6509575
2023-12-15 17:47:41 +01:00
bb64a047b4
gnu: r-flowworkspace: Update to 4.14.1.
...
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.1.
Change-Id: I2e950e77842add2eebeeffac2492ba0ef1aa6422
2023-12-15 17:47:40 +01:00
2ab52103c9
gnu: r-xcms: Update to 4.0.1.
...
* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.1.
Change-Id: I98dd730bb959d2483164177a3e534915d13fee44
2023-12-15 17:47:40 +01:00
e22fc284e3
gnu: r-genomicscores: Update to 2.14.2.
...
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.14.2.
Change-Id: I00417ef0c2f9657ec39690baa52a1cd075fb69c6
2023-12-15 17:47:40 +01:00
0d5917604c
gnu: r-dose: Update to 3.28.2.
...
* gnu/packages/bioconductor.scm (r-dose): Update to 3.28.2.
[propagated-inputs]: Remove r-hpo-db and r-mpo-db; add r-yulab-utils.
Change-Id: Ia29d318cac9b1e261fb89fc4d15f8b40ec3583f3
2023-12-15 17:47:40 +01:00
cff731dae5
gnu: r-lefser: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-lefser): Update to 1.12.1.
Change-Id: Iac94395b267e925116929d48abb3c28cff31504e
2023-12-15 17:47:39 +01:00
fcdd57e5fe
gnu: r-zellkonverter: Update to 1.12.1.
...
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.12.1.
Change-Id: I0db7450b3eff32e739ea3b806dde96114caba440
2023-12-15 17:47:39 +01:00
01f345225b
gnu: r-variantannotation: Update to 1.48.1.
...
* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.48.1.
Change-Id: I51e6a6db61fc4782823f9a7f85345742b8c7ab72
2023-12-15 17:47:39 +01:00
69126c2b9c
gnu: r-trackviewer: Update to 1.38.1.
...
* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.1.
Change-Id: I3ec74e7c37830e7a0b3b12311e304cc2e4fe322e
2023-12-15 17:47:39 +01:00
5a231ed554
gnu: r-tcgautils: Update to 1.22.2.
...
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.22.2.
Change-Id: I9c33a55076c672fa3a6ff6c97675dee16d186a39
2023-12-15 17:47:38 +01:00
27fab6cfee
gnu: r-rhdf5filters: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.14.1.
Change-Id: I260973b51c3a8e895339d1c4b6fbed8f66ccb50c
2023-12-15 17:47:38 +01:00
be49fe22cd
gnu: r-rhdf5: Update to 2.46.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.46.1.
Change-Id: Ia4781476ab82dd867a707e98767d8ee12d208003
2023-12-15 17:47:38 +01:00
0f499ab3b0
gnu: r-msnbase: Update to 2.28.1.
...
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.28.1.
Change-Id: I25fdd2662ab60939732cdee51fc2b53916f1d705
2023-12-15 17:47:38 +01:00
5883f6d17f
gnu: r-genomeinfodb: Update to 1.38.2.
...
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.38.2.
Change-Id: I17852db375cc7e833d100998c89751e68f3d4362
2023-12-15 17:47:38 +01:00
73e20717d0
gnu: r-edger: Update to 4.0.3.
...
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.3.
Change-Id: I97d73da131092effbf2404e710389d863ba39889
2023-12-15 17:47:37 +01:00
97d988cd23
gnu: r-champ: Update to 2.32.0.
...
* gnu/packages/bioconductor.scm (r-champ): Update to 2.32.0.
Change-Id: I2058a0c0b086452ccfae5ef84884aa0b9cf51abb
2023-12-15 17:47:37 +01:00
b77fe732f0
gnu: r-annotationdbi: Update to 1.64.1.
...
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.64.1.
Change-Id: If7f6bef70b3f4cc59c81ea68632b36c4b8449a73
2023-12-15 17:47:37 +01:00
96af9a059b
gnu: r-infercnv: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.18.1.
Change-Id: I99b0f17246ef267a58f87c1719066b1b4f198d8b
2023-12-15 17:47:37 +01:00
da79581a8f
gnu: r-dmrcate: Update to 2.16.1.
...
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 2.16.1.
[propagated-inputs]: Remove r-dss.
Change-Id: I183971826201b19cc88eb2768716aa2e165aba1f
2023-12-15 17:47:36 +01:00
ae4c47571e
gnu: r-degreport: Update to 1.38.5.
...
* gnu/packages/bioconductor.scm (r-degreport): Update to 1.38.5.
[propagated-inputs]: Add r-dendextend and r-stringi.
Change-Id: I73fe47489449b46406b879dba0318d02dc3c7614
2023-12-15 17:47:36 +01:00
3dc5ddb82a
gnu: r-cellid: Update to 1.10.1.
...
* gnu/packages/bioconductor.scm (r-cellid): Update to 1.10.1.
Change-Id: I74f0e39907eb293f84a2ee9d29ef5feab15b698a
2023-12-15 17:47:36 +01:00
f5f19ac400
gnu: r-biocversion: Update to 3.18.1.
...
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.18.1.
Change-Id: I844d321dc3716d2658ddd75a81d844f8b302af53
2023-12-15 17:47:35 +01:00
71c0e7eea6
gnu: r-bandits: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-bandits): Update to 1.18.1.
Change-Id: Ied13d156cb7762fd6f86a5a0cccff302b684530d
2023-12-15 17:47:35 +01:00
ea9441de8f
gnu: r-aseb: Update to 1.46.3.
...
* gnu/packages/bioconductor.scm (r-aseb): Update to 1.46.3.
Change-Id: I7fb905224840f598261fceba67207cd71e7a73d9
2023-12-15 17:47:35 +01:00
2dc2636444
gnu: r-anvil: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.14.1.
Change-Id: I2ea83e4a11a1268f222201480563fe1c9ce1060b
2023-12-15 17:47:35 +01:00
dafbf36e1f
gnu: r-agimicrorna: Update to 2.52.0.
...
* gnu/packages/bioconductor.scm (r-agimicrorna): Update to 2.52.0.
Change-Id: I0f739590d115b5dc354833cdac2ba3c400ddd995
2023-12-15 17:47:35 +01:00
8341726732
gnu: r-rhdf5lib: Update to 1.24.1.
...
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.24.1.
[propagated-inputs]: Add r-biocstyle and r-stringr.
[native-inputs]: Add r-rmarkdown.
Change-Id: I18c06543abee8e4a715f1ef120ce600562804225
2023-12-15 17:27:44 +01:00
c5f2535346
gnu: r-reportingtools: Update to 2.42.3.
...
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.42.3.
[source]: Adjust snippet.
[arguments]: Use minify-build-system in 'process-javascript phase.
[native-inputs]: Remove r-knitr; add r-rmarkdown.
Change-Id: I1c00e1a1d8095f40da29b57b8e82de493fcff26e
2023-12-15 17:25:58 +01:00
9013d47d5e
gnu: r-affycoretools: Update to 1.74.0.
...
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.74.0.
Change-Id: I4197d73e62477bb64182181229c8a33f3048406a
2023-12-15 16:52:00 +01:00
93597fc39c
gnu: pyscenic: Update to 0.11.2-1.5f170fd.
...
* gnu/packages/bioinformatics.scm (pyscenic): Update to 0.11.2-1.5f170fd.
[build-system]: Use pyproject-build-system.
[arguments]: Patch setup.py.
[propagated-inputs]: Add python-pyarrow.
Change-Id: I3acd7c921c2c44741c0afd0bbda011f63ed14c42
2023-12-15 16:13:14 +01:00
46b1e717cf
gnu: python-ctxcore: Update to 0.2.0.
...
* gnu/packages/bioinformatics.scm (python-ctxcore): Update to 0.2.0.
[build-system]: Use pyproject-build-system.
[propagated-inputs]: Replace python-pyarrow-0.16 with python-pyarrow.
Change-Id: I3f72f9872b438c0a624d23becb5d7828f1986da7
2023-12-15 16:13:14 +01:00
b2aa1d7cd0
gnu: r-readwriter: Update to 1.5.3-1.91373c4.
...
* gnu/packages/bioinformatics.scm (r-readwriter): Update to 1.5.3-1.91373c4.
[propagated-inputs]: Remove r-gdata.
Change-Id: Ice16d3b07d7446ca864fd30e46110c9060b83081
2023-12-15 16:13:14 +01:00
07f85bb057
gnu: r-stringendo: Update to 0.6.0.
...
* gnu/packages/bioinformatics.scm (r-stringendo): Update to 0.6.0.
[propagated-inputs]: Remove r-devtools and r-usethis; add r-clipr.
Change-Id: Iff4a841beb51558ba7d5d8e87ee56e7c3f2b2710
2023-12-15 16:13:14 +01:00
4d92caef51
gnu: r-liana: Add missing inputs.
...
* gnu/packages/bioinformatics.scm (r-liana)[propagated-inputs]: Add r-basilisk
and r-basilisk-utils.
Change-Id: I5dce058a446245e6797cca1c35485f38b3da819a
2023-12-15 16:13:14 +01:00
0ec25720ab
gnu: python-vaex-core: Add missing input.
...
* gnu/packages/python-science.scm (python-vaex-core)[propagated-inputs]: Add
python-click.
Change-Id: Id91e925832ed107d5b346ba513a9825dc31481f6
2023-12-15 16:13:14 +01:00
07acdb1552
gnu: r-desctools: Update to 0.99.52.
...
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.52.
[propagated-inputs]: Remove r-bh; add r-cli.
Change-Id: Idca54e4796494b1d5635412c8f15bf639383ee0a
2023-12-15 16:13:14 +01:00
3e17f2ff9c
gnu: r-bayesfactor: Update to 0.9.12-4.6.
...
* gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.6.
Change-Id: Iac17532bb38081a536790af3c5a36ad4791905b9
2023-12-15 16:13:14 +01:00
53082f702d
gnu: r-cairo: Update to 1.6-2.
...
* gnu/packages/statistics.scm (r-cairo): Update to 1.6-2.
Change-Id: I519f1bef619873d81c38b272251075b4c8c88c68
2023-12-15 16:13:14 +01:00
040c86f2c8
gnu: r-tclust: Update to 1.5-5.
...
* gnu/packages/statistics.scm (r-tclust): Update to 1.5-5.
Change-Id: I8526d099efd09fc458deb4feb090eb83671549ea
2023-12-15 16:13:14 +01:00
541d828f97
gnu: r-robust: Update to 0.7-3.
...
* gnu/packages/statistics.scm (r-robust): Update to 0.7-3.
Change-Id: Ia4908566898547b7d8d14138f776de78f8f4a9fd
2023-12-15 16:13:14 +01:00
01c7baaf43
gnu: r-pcapp: Update to 2.0-4.
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* gnu/packages/statistics.scm (r-pcapp): Update to 2.0-4.
Change-Id: Ie0ad4cd7ddf9c649294f4ba76fc3aa6422f5e81c
2023-12-15 16:13:14 +01:00
a5df4d20ee
gnu: r-robustbase: Update to 0.99-1.
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* gnu/packages/statistics.scm (r-robustbase): Update to 0.99-1.
Change-Id: I01fe9d9a24471eaa93439169ad197fbaf54a8446
2023-12-15 16:13:14 +01:00
45e59dae8f
gnu: r-mclust: Update to 6.0.1.
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* gnu/packages/statistics.scm (r-mclust): Update to 6.0.1.
Change-Id: Iabc63d21f904d92205db4364053537f580658af5
2023-12-15 16:13:14 +01:00
f7da625a37
gnu: r-diptest: Update to 0.77-0.
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* gnu/packages/statistics.scm (r-diptest): Update to 0.77-0.
Change-Id: Ic0dcd061fc82a6ef5bc4eb9d222245c00052e0aa
2023-12-15 16:13:14 +01:00
c5e8b34bde
gnu: r-fastica: Update to 1.2-4.
...
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-4.
Change-Id: Ia0f61d080891317f825837e42aee70e94eff83dc
2023-12-15 16:13:14 +01:00
f2041fe211
gnu: r-ggthemes: Update to 5.0.0.
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* gnu/packages/statistics.scm (r-ggthemes): Update to 5.0.0.
[propagated-inputs]: Add r-lifecycle.
Change-Id: Ie190e236dd4bfc951725535774071eea60488ce8
2023-12-15 16:13:14 +01:00
b21ed00b81
gnu: r-gtools: Update to 3.9.5.
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* gnu/packages/statistics.scm (r-gtools): Update to 3.9.5.
Change-Id: I99642b15227fa007cfd86dc378afdd5f54d4567f
2023-12-15 16:13:13 +01:00
9592148434
gnu: r-mvtnorm: Update to 1.2-4.
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* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.2-4.
Change-Id: I3d40983459a474bea7e19809b3c030672d2ff0bc
2023-12-15 16:13:13 +01:00
e7c61edc2f
gnu: r-r-utils: Update to 2.12.3.
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* gnu/packages/statistics.scm (r-r-utils): Update to 2.12.3.
Change-Id: Ia0e99369dce4fd9aae06dac10b2ce7ba3906fc5a
2023-12-15 16:13:13 +01:00
d17289bad2
gnu: r-e1071: Update to 1.7-14.
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* gnu/packages/statistics.scm (r-e1071): Update to 1.7-14.
Change-Id: Ib5fec1c275936a335e612e65f417d92dadc8a972
2023-12-15 16:13:13 +01:00
e1a846a257
gnu: r-rtsne: Update to 0.17.
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* gnu/packages/statistics.scm (r-rtsne): Update to 0.17.
Change-Id: Ida34d5e8ee0ac9eb12e90bfd7c620f527113b0a4
2023-12-15 16:13:13 +01:00
a7e3473c9b
gnu: r-segmented: Update to 2.0-0.
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* gnu/packages/statistics.scm (r-segmented): Update to 2.0-0.
Change-Id: I879ef86dfaf80f8dbabdae18136c2524dbbea11b
2023-12-15 16:13:13 +01:00
cdf28e5e11
gnu: r-xml: Update to 3.99-0.16.
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* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.16.
Change-Id: Ic0dd6c2146f73b7add5038d469c1eeda9713b3f2
2023-12-15 16:13:13 +01:00
00594a76e1
gnu: r-rsqlite: Update to 2.3.4.
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* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.4.
[propagated-inputs]: Add r-rlang.
Change-Id: Id2ab593e43b30470fe51dbe1c516611770752967
2023-12-15 16:13:13 +01:00
18ed7e0a00
gnu: r-rcpparmadillo: Update to 0.12.6.6.1.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.6.6.1.
Change-Id: I310dbae6349098ef2f35e78fb1a035c32c613b16
2023-12-15 16:13:13 +01:00
92489d0766
gnu: r-git2r: Update to 0.33.0.
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* gnu/packages/statistics.scm (r-git2r): Update to 0.33.0.
Change-Id: Ia88d5022eaa74367616d8011342e84ee83977ae9
2023-12-15 16:13:13 +01:00
16801b7e14
gnu: r-desc: Update to 1.4.3.
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* gnu/packages/statistics.scm (r-desc): Update to 1.4.3.
[propagated-inputs]: Remove r-rprojroot.
Change-Id: I4cbb34eb7981da3684b24df508464da05f2c356f
2023-12-15 16:13:13 +01:00
77931b17ff
gnu: r-checkmate: Update to 2.3.1.
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* gnu/packages/statistics.scm (r-checkmate): Update to 2.3.1.
Change-Id: Ieb3c8b049ca19b4cf348a536aa03377b33303f08
2023-12-15 16:13:13 +01:00
10e649db3e
gnu: r-xml2: Update to 1.3.6.
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* gnu/packages/statistics.scm (r-xml2): Update to 1.3.6.
[propagated-inputs]: Add r-cli and r-rlang.
Change-Id: Ibc8d72f136cadd41d07edeefe6612e440ded17fb
2023-12-15 16:13:13 +01:00
ac224a303f
gnu: r-data-table: Update to 1.14.10.
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* gnu/packages/statistics.scm (r-data-table): Update to 1.14.10.
Change-Id: I12b5c3fed5924c21e1892234e8ce445d545a7193
2023-12-15 16:13:13 +01:00
6c50ce5775
gnu: r-dplyr: Update to 1.1.4.
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* gnu/packages/statistics.scm (r-dplyr): Update to 1.1.4.
Change-Id: I166f005358284d5d253e1e9eb722d7bca502fd4a
2023-12-15 16:13:13 +01:00
c8fdf422e4
gnu: r-testthat: Update to 3.2.1.
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* gnu/packages/statistics.scm (r-testthat): Update to 3.2.1.
[propagated-inputs]: Remove r-ellipsis.
Change-Id: If4b41bd4b0e1f6aa00e19303aa57a960090fe208
2023-12-15 16:13:13 +01:00
e63220843b
gnu: r-markdown: Update to 1.12.
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* gnu/packages/statistics.scm (r-markdown): Update to 1.12.
Change-Id: I36aed1e9570705a5d9b6d7f03511c2ea7297998e
2023-12-15 16:13:13 +01:00
ad25078d14
gnu: r-svglite: Update to 2.1.3.
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* gnu/packages/statistics.scm (r-svglite): Update to 2.1.3.
Change-Id: I4fcd181e414904baede631896a46f0d17df94094
2023-12-15 16:13:13 +01:00
0fd9a9dc54
gnu: r-gdtools: Update to 0.3.5.
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* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.5.
Change-Id: I78eb7839ccb83ce60df4ee1bdd007d96d0323f6b
2023-12-15 16:13:13 +01:00
0b9590d359
gnu: r-stringi: Update to 1.8.2.
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* gnu/packages/statistics.scm (r-stringi): Update to 1.8.2.
Change-Id: If949487428acacea3db66a603d4a07ee5f30f18c
2023-12-15 16:13:13 +01:00
16418b676e
gnu: r-rpart: Update to 4.1.23.
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* gnu/packages/statistics.scm (r-rpart): Update to 4.1.23.
Change-Id: I75093127c46729952be6d55b802ed1241f2861b7
2023-12-15 16:13:13 +01:00
43a4104468
gnu: r-nlme: Update to 3.1-164.
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* gnu/packages/statistics.scm (r-nlme): Update to 3.1-164.
Change-Id: I5fbdbd09d5e720a8a5ce01088f9d4b8e51805432
2023-12-15 16:13:13 +01:00
fd4bb4a54d
gnu: r-matrix: Update to 1.6-4.
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* gnu/packages/statistics.scm (r-matrix): Update to 1.6-4.
Change-Id: I7c535d013241057c9546ae51f1a056c534e22f42
2023-12-15 16:13:13 +01:00
84fb814d88
gnu: r-foreign: Update to 0.8-86.
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* gnu/packages/statistics.scm (r-foreign): Update to 0.8-86.
Change-Id: I8e7c48db539c69a710fc2b298b046e4335e33eeb
2023-12-15 16:13:13 +01:00
be7f1dba84
gnu: r-cluster: Update to 2.1.6.
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* gnu/packages/statistics.scm (r-cluster): Update to 2.1.6.
Change-Id: I7f74d73217463790f7545bddcb9571a4c2a96802
2023-12-15 16:13:13 +01:00
ad5a9e20cc
gnu: r-iotools: Update to 0.3-5.
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* gnu/packages/cran.scm (r-iotools): Update to 0.3-5.
Change-Id: Iae964c227556ba25e4ec008922124747cbee8368
2023-12-15 16:13:13 +01:00
a9616ac45e
gnu: r-qs: Update to 0.25.7.
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* gnu/packages/cran.scm (r-qs): Update to 0.25.7.
Change-Id: Id1142f1bdc920660e671a85be5d3d89ab57dd1bf
2023-12-15 16:13:13 +01:00
010805aa9c
gnu: r-stringfish: Update to 0.16.0.
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* gnu/packages/cran.scm (r-stringfish): Update to 0.16.0.
Change-Id: I2f0a87825baf87f0d8cbee846993985e01a7f477
2023-12-15 16:13:13 +01:00
906e5e8881
gnu: r-webutils: Update to 1.2.0.
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* gnu/packages/cran.scm (r-webutils): Update to 1.2.0.
Change-Id: I80f76b14bb7baeb2ce2693bfffefcc0279691591
2023-12-15 16:13:13 +01:00
e5d24d17b9
gnu: r-vroom: Update to 1.6.5.
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* gnu/packages/cran.scm (r-vroom): Update to 1.6.5.
Change-Id: Ifad88c781776aa7ef13583ba8ca907c16ccdb86b
2023-12-15 16:13:12 +01:00
de0dffb8ea
gnu: r-rjsonio: Update to 1.3-1.9.
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* gnu/packages/cran.scm (r-rjsonio): Update to 1.3-1.9.
Change-Id: If8ec56abb710465c053be4c4f9d98e078f785649
2023-12-15 16:13:12 +01:00
13c00f407f
gnu: r-mlr3tuning: Update to 0.19.2.
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* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.19.2.
Change-Id: I561e495110ff87848bd2082dd04e240ad376c347
2023-12-15 16:13:12 +01:00
6eae78c4ca
gnu: r-mlr3learners: Update to 0.5.7.
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* gnu/packages/cran.scm (r-mlr3learners): Update to 0.5.7.
Change-Id: Id0bb3f0309e84ce3da1bbe0f4b7cebe51da6d269
2023-12-15 16:13:12 +01:00
9fc384b8d2
gnu: r-mlr3: Update to 0.17.0.
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* gnu/packages/cran.scm (r-mlr3): Update to 0.17.0.
Change-Id: Ie1b8e3e1ad4e1f8b770454d9b162aabce313f36f
2023-12-15 16:13:12 +01:00
87235849f1
gnu: r-mlr3pipelines: Update to 0.5.0-2.
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* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.5.0-2.
Change-Id: I5a83a586c5b0dacfe333df917d40356c2f2b8d80
2023-12-15 16:13:12 +01:00
294ac5e255
gnu: r-seurat: Update to 5.0.1.
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* gnu/packages/cran.scm (r-seurat): Update to 5.0.1.
Change-Id: Ia22f8f698f0e73b7216b7abb48102eaf6eef2593
2023-12-15 16:13:12 +01:00
ca46f973e9
gnu: r-seuratobject: Update to 5.0.1.
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* gnu/packages/cran.scm (r-seuratobject): Update to 5.0.1.
Change-Id: I5fe5f13c9051ed926b67516bd531df1319bb492d
2023-12-15 16:13:12 +01:00
c2e05a7f96
gnu: r-seqminer: Update to 9.3.
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* gnu/packages/cran.scm (r-seqminer): Update to 9.3.
Change-Id: I728caab2b7b57cd1f6f62940aa4ea749c8cf6628
2023-12-15 16:13:12 +01:00
f231e73d94
gnu: r-qtl2: Update to 0.34.
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* gnu/packages/cran.scm (r-qtl2): Update to 0.34.
Change-Id: Ia96e9cd3816d70da6091bba54ac1a64b31ba6d91
2023-12-15 16:13:12 +01:00
036ac0386f
gnu: r-qtl: Update to 1.66.
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* gnu/packages/cran.scm (r-qtl): Update to 1.66.
Change-Id: Ibc1a9f614bb472129cddb4393ac0f17f52251526
2023-12-15 16:13:12 +01:00
783586ef62
gnu: r-dicedesign: Update to 1.10.
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* gnu/packages/cran.scm (r-dicedesign): Update to 1.10.
Change-Id: I862d31edc08ba9df309af9d664ee3657e0058da2
2023-12-15 16:13:12 +01:00
e00b6fd7ff
gnu: r-igraph: Update to 1.6.0.
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* gnu/packages/cran.scm (r-igraph): Update to 1.6.0.
Change-Id: Ib01b004bfe28d40e9dedd7a8ea0f86b2c22cc9e3
2023-12-15 16:13:12 +01:00
53cebb43b8
gnu: r-clusterr: Update to 1.3.2.
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* gnu/packages/cran.scm (r-clusterr): Update to 1.3.2.
Change-Id: I77c23224f49d335b8337b01b8baf156fe36f5050
2023-12-15 16:13:12 +01:00
d66831117d
gnu: r-cpp11: Update to 0.4.7.
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* gnu/packages/cran.scm (r-cpp11): Update to 0.4.7.
Change-Id: I3105601458ff91d316e8913005e8b269ac0192c7
2023-12-15 16:13:12 +01:00
a8d88d9798
gnu: r-gaston: Update to 1.6.
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* gnu/packages/cran.scm (r-gaston): Update to 1.6.
Change-Id: I63a452e40f17065a263d1dc731b3ae54f921bff7
2023-12-15 16:13:12 +01:00
6351c2bbc8
gnu: r-spatstat-random: Update to 3.2-2.
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* gnu/packages/cran.scm (r-spatstat-random): Update to 3.2-2.
Change-Id: I0c15d04be272d325200b19610be7a658df34fe40
2023-12-15 16:13:12 +01:00
91b73b16be
gnu: r-memisc: Update to 0.99.31.7.
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* gnu/packages/cran.scm (r-memisc): Update to 0.99.31.7.
Change-Id: I114a698564da63a550e310c692db1a14888ecbed
2023-12-15 16:13:12 +01:00
3996149315
gnu: r-lightgbm: Update to 4.2.0.
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* gnu/packages/cran.scm (r-lightgbm): Update to 4.2.0.
[native-inputs]: Add r-knitr.
Change-Id: If63739b6159ed618eaab5d32b047f3cf30e6cd44
2023-12-15 16:13:12 +01:00
e0520bd6b2
gnu: r-getpass: Update to 0.2-4.
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* gnu/packages/cran.scm (r-getpass): Update to 0.2-4.
Change-Id: Ibcf530e50cd3f252abb3f861d598d4fe6870bb0e
2023-12-15 16:13:12 +01:00
c525635e65
gnu: r-rlecuyer: Update to 0.3-8.
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* gnu/packages/cran.scm (r-rlecuyer): Update to 0.3-8.
Change-Id: I96727577eebf0ad06393fa8b2c62b2019f5d1ab7
2023-12-15 16:13:12 +01:00
f5c025053b
gnu: r-keyring: Update to 1.3.2.
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* gnu/packages/cran.scm (r-keyring): Update to 1.3.2.
Change-Id: Ie40cabacb09d2ea91b4c3ca1cf52f1dab25d2443
2023-12-15 16:13:12 +01:00
b3054504f8
gnu: r-msm: Update to 1.7.1.
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* gnu/packages/cran.scm (r-msm): Update to 1.7.1.
Change-Id: I9898adc02e9ced35fd30ab9534bcc87fa0137372
2023-12-15 16:13:12 +01:00
e4fbd3455c
gnu: r-stm: Update to 1.3.7.
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* gnu/packages/cran.scm (r-stm): Update to 1.3.7.
Change-Id: I2649bec8de84134c7bc168d6dcb2c3ac112648e0
2023-12-15 16:13:12 +01:00
9a8a137afe
gnu: r-topicmodels: Update to 0.2-15.
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* gnu/packages/cran.scm (r-topicmodels): Update to 0.2-15.
Change-Id: I4d29dcbdb601de9498b7b166e242fbf8e3c4b91a
2023-12-15 16:13:12 +01:00
ca68c6eba3
gnu: r-isocodes: Update to 2023.12.07.
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* gnu/packages/cran.scm (r-isocodes): Update to 2023.12.07.
Change-Id: If92c17d5dac66c4006bfdab1d21eb5e3b4f0db6a
2023-12-15 16:13:12 +01:00
98157397cd
gnu: r-tuner: Update to 1.4.6.
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* gnu/packages/cran.scm (r-tuner): Update to 1.4.6.
Change-Id: I73970ae0475375e6b1d2879ca655e89aef5bb785
2023-12-15 16:13:11 +01:00
c38e706b44
gnu: r-filelock: Update to 1.0.3.
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* gnu/packages/cran.scm (r-filelock): Update to 1.0.3.
Change-Id: Ice2655eaa01f1ee9bf4f8d5081bba48c5fea6b07
2023-12-15 16:13:11 +01:00
613f9c7ec8
gnu: r-accrual: Update to 1.4.
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* gnu/packages/cran.scm (r-accrual): Update to 1.4.
Change-Id: I3e811a067ef1be9130e6ee31058372d85645d4b3
2023-12-15 16:13:11 +01:00
1ede0709d2
gnu: r-pmcmrplus: Update to 1.9.10.
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* gnu/packages/cran.scm (r-pmcmrplus): Update to 1.9.10.
Change-Id: I8a2c3a06626be432d16d661ab161c2f5454b850d
2023-12-15 16:13:11 +01:00
e975c2e8c8
gnu: r-desolve: Update to 1.40.
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* gnu/packages/cran.scm (r-desolve): Update to 1.40.
Change-Id: I574c8928b66ef7042b24d00581e1ea73e3215571
2023-12-15 16:13:11 +01:00
c68de2cdf5
gnu: r-assertr: Update to 3.0.1.
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* gnu/packages/cran.scm (r-assertr): Update to 3.0.1.
Change-Id: I8934843f5f43cf1797c705e3a5f2823087d81891
2023-12-15 16:13:11 +01:00
405311d3b6
gnu: r-leiden: Update to 0.4.3.1.
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* gnu/packages/cran.scm (r-leiden): Update to 0.4.3.1.
Change-Id: I1057c77be43459f28e23bdbbf8831878dfcfd10d
2023-12-15 16:13:11 +01:00
d3566377dd
gnu: r-xgboost: Update to 1.7.6.1.
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* gnu/packages/cran.scm (r-xgboost): Update to 1.7.6.1.
Change-Id: I9a18cd3afba31322d92d98e726500bc5bde910d6
2023-12-15 16:13:11 +01:00
acf1c199e9
gnu: r-ibreakdown: Update to 2.1.2.
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* gnu/packages/cran.scm (r-ibreakdown): Update to 2.1.2.
Change-Id: Id65584c6cc65308629e47456f47a26eef6812116
2023-12-15 16:13:11 +01:00
8d0ee7d7a4
gnu: r-dqrng: Update to 0.3.2.
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* gnu/packages/cran.scm (r-dqrng): Update to 0.3.2.
Change-Id: I60b63c4093e2fbbb888cc8afc644a99f1dc1358b
2023-12-15 16:13:11 +01:00
7481f0092d
gnu: r-float: Update to 0.3-2.
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* gnu/packages/cran.scm (r-float): Update to 0.3-2.
Change-Id: I313dab67837edbfe4fb1226fdda47c9f7f57952b
2023-12-15 16:13:11 +01:00
cd322357f5
gnu: r-tdthap: Update to 1.3.
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* gnu/packages/cran.scm (r-tdthap): Update to 1.3.
Change-Id: Ib24625aafb7974cfa1430e91c8b11cc2b47b0fa6
2023-12-15 16:13:11 +01:00
691490a429
gnu: r-spdep: Update to 1.3-1.
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* gnu/packages/cran.scm (r-spdep): Update to 1.3-1.
Change-Id: I82278f4b6c30ae387c71365733a04f79ff1f3237
2023-12-15 16:13:11 +01:00
9181474ca5
gnu: r-s2: Update to 1.1.5.
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* gnu/packages/cran.scm (r-s2): Update to 1.1.5.
Change-Id: I8a1396dbddceb1a79eb93b84fc13487fc2c1293c
2023-12-15 16:13:11 +01:00
edea7e8ec5
gnu: r-wk: Update to 0.9.1.
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* gnu/packages/cran.scm (r-wk): Update to 0.9.1.
Change-Id: Iaa9182b262f91abae45f894a0c89a069f1b9fdb9
2023-12-15 16:13:11 +01:00
f934375f95
gnu: r-deldir: Update to 2.0-2.
...
* gnu/packages/cran.scm (r-deldir): Update to 2.0-2.
Change-Id: I6b23812f861a8711da8b6b8c2ff60803a937b704
2023-12-15 16:13:11 +01:00
cf1be78002
gnu: r-units: Update to 0.8-5.
...
* gnu/packages/cran.scm (r-units): Update to 0.8-5.
Change-Id: I1d7755251db671a4bd0ad07a0f67fc3bf4554208
2023-12-15 16:13:11 +01:00
768a26a0ae
gnu: r-seqinr: Update to 4.2-36.
...
* gnu/packages/cran.scm (r-seqinr): Update to 4.2-36.
Change-Id: Icdd5d55e0627fe593142a999f283d87aa5d26f95
2023-12-15 16:13:11 +01:00
b1ea092a47
gnu: r-sets: Update to 1.0-25.
...
* gnu/packages/cran.scm (r-sets): Update to 1.0-25.
Change-Id: I9bedbae334edb54818f5ae680dcbd8a544899dc0
2023-12-15 16:13:11 +01:00
f30c5aef79
gnu: r-capushe: Update to 1.1.2.
...
* gnu/packages/cran.scm (r-capushe): Update to 1.1.2.
Change-Id: I006063c79a09ba4e00a8e3646ed07da15283d650
2023-12-15 16:13:11 +01:00
98dd9d250d
gnu: r-mcmc: Update to 0.9-8.
...
* gnu/packages/cran.scm (r-mcmc): Update to 0.9-8.
Change-Id: I25992ab64d09d1c2561635df5963c3be1060f800
2023-12-15 16:13:11 +01:00
1c19245ebc
gnu: r-dotcall64: Update to 1.1-1.
...
* gnu/packages/cran.scm (r-dotcall64): Update to 1.1-1.
Change-Id: I0ec529c773c90ba0d69ced8fb3ecb624d3e76624
2023-12-15 16:13:11 +01:00
845497e8f5
gnu: r-rmpfr: Update to 0.9-4.
...
* gnu/packages/cran.scm (r-rmpfr): Update to 0.9-4.
Change-Id: I4dffb5176c67cf8f7fa830343a94c58ef67a2cfb
2023-12-15 16:13:11 +01:00
95782bb8f8
gnu: r-gmp: Update to 0.7-3.
...
* gnu/packages/cran.scm (r-gmp): Update to 0.7-3.
Change-Id: Id1383d2c8762e4fe3d3bfaf739ead2e50002e5b8
2023-12-15 16:13:11 +01:00
12e19abec5
gnu: r-ore: Update to 1.7.4.1.
...
* gnu/packages/cran.scm (r-ore): Update to 1.7.4.1.
Change-Id: I299c798a4c366b55fd4dc946a6b1bbe20e5e6b2c
2023-12-15 16:13:11 +01:00
b86972aeb2
gnu: r-rnifti: Update to 1.5.1.
...
* gnu/packages/cran.scm (r-rnifti): Update to 1.5.1.
Change-Id: I61afbeee7e0e33c1cf8eecb1b5a99fc30b1c805d
2023-12-15 16:13:10 +01:00
c9dcb314a4
gnu: r-tiff: Update to 0.1-12.
...
* gnu/packages/cran.scm (r-tiff): Update to 0.1-12.
Change-Id: I30e24739912e665bff56ec68ba43b6c94dc7bfba
2023-12-15 16:13:10 +01:00
e06c8a51ee
gnu: r-sodium: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-sodium): Update to 1.3.1.
Change-Id: Ic5f660d2e33235be1b1cf5df7bf59e8646ca628e
2023-12-15 16:13:10 +01:00
93e4dca8fd
gnu: r-admisc: Update to 0.34.
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* gnu/packages/cran.scm (r-admisc): Update to 0.34.
Change-Id: Ib457dbb7dd2c4f0ce8ef6bd13444164d2a10813d
2023-12-15 16:13:10 +01:00
8a81f7c737
gnu: r-multicool: Update to 1.0.0.
...
* gnu/packages/cran.scm (r-multicool): Update to 1.0.0.
Change-Id: I09406e1354444bbfe2246305dec8a49fcafe22be
2023-12-15 16:13:10 +01:00
f3886b71cc
gnu: r-rgl: Update to 1.2.8.
...
* gnu/packages/cran.scm (r-rgl): Update to 1.2.8.
Change-Id: I3efd8552eb9b4108357665dd89e1b75d5acdc009
2023-12-15 16:13:10 +01:00
4d9803cad8
gnu: r-ncdf4: Update to 1.22.
...
* gnu/packages/cran.scm (r-ncdf4): Update to 1.22.
Change-Id: Ibf2c9d473b30637fd13a6075b23fdefbdb2d1fbb
2023-12-15 16:13:10 +01:00
cc800e4030
gnu: r-rcppalgos: Update to 2.8.3.
...
* gnu/packages/cran.scm (r-rcppalgos): Update to 2.8.3.
Change-Id: Ie450f75d7221ea5478ff0891d6590b6a6c782a4b
2023-12-15 16:13:10 +01:00
1e9b81a468
gnu: r-clustercrit: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-clustercrit): Update to 1.3.0.
Change-Id: If46707ce09f5b52ae730bca4517179e4a7bbc475
2023-12-15 16:13:10 +01:00
0374da1c50
gnu: r-gert: Update to 2.0.1.
...
* gnu/packages/cran.scm (r-gert): Update to 2.0.1.
Change-Id: I1a38e4030ccf3d13bdfe911124368c64cc88995d
2023-12-15 16:13:10 +01:00
ac1cb93de6
gnu: r-tmb: Update to 1.9.9.
...
* gnu/packages/cran.scm (r-tmb): Update to 1.9.9.
Change-Id: I4af61e1b2fa947c64e5480763c9ea4e573634b76
2023-12-15 16:13:10 +01:00
c41ec87ace
gnu: r-acceptancesampling: Update to 1.0-10.
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* gnu/packages/cran.scm (r-acceptancesampling): Update to 1.0-10.
Change-Id: Ic2360192f330645a6f428fe5ba332b80a52e2644
2023-12-15 16:13:10 +01:00
613e155cc2
gnu: r-quickjsr: Update to 1.0.8.
...
* gnu/packages/cran.scm (r-quickjsr): Update to 1.0.8.
Change-Id: I5815d69165b2d7f635cb2a5f7f4a05a4e4f79dc0
2023-12-15 16:13:10 +01:00
3b7e441bdc
gnu: r-tarchetypes: Update to 0.7.10.
...
* gnu/packages/cran.scm (r-tarchetypes): Update to 0.7.10.
Change-Id: I71a64325db513663df30d5f1e7ca46feebdd7443
2023-12-15 16:13:10 +01:00
be7dd9cdef
gnu: r-gee: Update to 4.13-26.
...
* gnu/packages/cran.scm (r-gee): Update to 4.13-26.
Change-Id: I5cdd6f8b51f58affb68893bbde1291cdab30cc1d
2023-12-15 16:13:10 +01:00
ca94f61878
gnu: r-nleqslv: Update to 3.3.5.
...
* gnu/packages/cran.scm (r-nleqslv): Update to 3.3.5.
Change-Id: Icbbcbdee0a652cfe693baf7cd05e7ce89e315b2e
2023-12-15 16:13:10 +01:00
5410297190
gnu: r-gam: Update to 1.22-3.
...
* gnu/packages/cran.scm (r-gam): Update to 1.22-3.
Change-Id: Iaf4d3e19c5a39e70754a41b32b1de5405cec246e
2023-12-15 16:13:10 +01:00
4fd871dd26
gnu: r-interp: Update to 1.1-5.
...
* gnu/packages/cran.scm (r-interp): Update to 1.1-5.
Change-Id: I6ce34fb5e66268123415bce48750e39d6a5a4c2c
2023-12-15 16:13:10 +01:00
66f371594f
gnu: r-cmplot: Update to 4.5.0.
...
* gnu/packages/cran.scm (r-cmplot): Update to 4.5.0.
Change-Id: Ia072afcb64ed0e9a744b1cfd7e0e677fb205babe
2023-12-15 16:13:10 +01:00
0ca8d8bf78
gnu: r-insight: Update to 0.19.7.
...
* gnu/packages/cran.scm (r-insight): Update to 0.19.7.
Change-Id: I3045c792decb2b814065973c3c866f146686ed09
2023-12-15 16:13:10 +01:00
14f09c1782
gnu: r-overlap: Update to 0.3.4.1.
...
* gnu/packages/cran.scm (r-overlap): Update to 0.3.4.1.
Change-Id: I560fa1ae58630bf1cd7ad32d3b0891acbce9407f
2023-12-15 16:13:10 +01:00
47f8a320fb
gnu: r-rjags: Update to 4-15.
...
* gnu/packages/cran.scm (r-rjags): Update to 4-15.
Change-Id: Ie01caed5427778eb4f99eca9a1e04f58c15f8707
2023-12-15 16:13:10 +01:00
bed234ff0d
gnu: r-fansi: Update to 1.0.6.
...
* gnu/packages/cran.scm (r-fansi): Update to 1.0.6.
Change-Id: Iad9d2fa4b37f7b9cef4a254c01778523af9cd5e6
2023-12-15 16:13:10 +01:00
fc66372346
gnu: r-snowfall: Update to 1.84-6.3.
...
* gnu/packages/cran.scm (r-snowfall): Update to 1.84-6.3.
Change-Id: Iab34be3fb2c956881748896e999d4d78a07b83d2
2023-12-15 16:13:10 +01:00
7d1af288b4
gnu: r-fstcore: Update to 0.9.18.
...
* gnu/packages/cran.scm (r-fstcore): Update to 0.9.18.
Change-Id: I26294d2d7ec56255b521fafcc3a1d0bed19e531b
2023-12-15 16:13:10 +01:00
945a2d3fc9
gnu: r-later: Update to 1.3.2.
...
* gnu/packages/cran.scm (r-later): Update to 1.3.2.
Change-Id: Iea057b9badad7ab668f2837b1b1ff95b544385e8
2023-12-15 16:13:10 +01:00
2857cbd250
gnu: r-arules: Update to 1.7-7.
...
* gnu/packages/cran.scm (r-arules): Update to 1.7-7.
Change-Id: I4b9a5853257e6bdc7fc17e832d3592b9f4b770da
2023-12-15 16:13:09 +01:00
2523373724
gnu: r-signal: Update to 1.8-0.
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* gnu/packages/cran.scm (r-signal): Update to 1.8-0.
Change-Id: I961650dd53b25750fc475ed45da879d6b71ba315
2023-12-15 16:13:09 +01:00
a576f5b8df
gnu: r-baseline: Update to 1.3-5.
...
* gnu/packages/cran.scm (r-baseline): Update to 1.3-5.
Change-Id: I890681dbda6057b085049c7eb311619b953433df
2023-12-15 16:13:09 +01:00
e6825ebf0f
gnu: r-phontools: Update to 0.2-2.2.
...
* gnu/packages/cran.scm (r-phontools): Update to 0.2-2.2.
Change-Id: Iff2a33d97857dd8733abef1ab334a917907879d1
2023-12-15 16:13:09 +01:00
d89ff9a240
gnu: r-expm: Update to 0.999-8.
...
* gnu/packages/cran.scm (r-expm): Update to 0.999-8.
Change-Id: Ib1ffe5cb289f0bf836f715640e4eef9b8be7edf5
2023-12-15 16:13:09 +01:00
ad1b00d5d3
gnu: r-extradistr: Update to 1.10.0.
...
* gnu/packages/cran.scm (r-extradistr): Update to 1.10.0.
Change-Id: Ifcec7fabd3c28c2ba4a18517a6432fadee333434
2023-12-15 16:13:09 +01:00
a420b09fbb
gnu: r-tseries: Update to 0.10-55.
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* gnu/packages/cran.scm (r-tseries): Update to 0.10-55.
Change-Id: Ic4c127a8b45eb725f42d60337179971fb63eeff4
2023-12-15 16:13:09 +01:00
5def37be6a
gnu: r-splus2r: Update to 1.3-4.
...
* gnu/packages/cran.scm (r-splus2r): Update to 1.3-4.
Change-Id: I51a2d9c7f13ec14760967d814bf3b292ad90b856
2023-12-15 16:13:09 +01:00
9a7c16df9a
gnu: r-ttr: Update to 0.24.4.
...
* gnu/packages/cran.scm (r-ttr): Update to 0.24.4.
Change-Id: I322efb84cb7d62ff32b515aac59870fe8a0ec4f2
2023-12-15 16:13:09 +01:00
9cc356fddb
gnu: r-sna: Update to 2.7-2.
...
* gnu/packages/cran.scm (r-sna): Update to 2.7-2.
Change-Id: Id284a01c21d0bbe8dffb5e39aca6dd7ab0bd993f
2023-12-15 16:13:09 +01:00
ac05612a85
gnu: r-network: Update to 1.18.2.
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* gnu/packages/cran.scm (r-network): Update to 1.18.2.
Change-Id: I0e9695a60606c87c839613e8ffb4e35e4c0b40c9
2023-12-15 16:13:09 +01:00
50aaf95338
gnu: r-nestedcv: Update to 0.7.3.
...
* gnu/packages/cran.scm (r-nestedcv): Update to 0.7.3.
[propagated-inputs]: Add r-magrittr.
Change-Id: I29cabb4e312dbe38eda980f27cba8ff4361d7e6d
2023-12-15 16:13:09 +01:00
39ae91758b
gnu: r-tinytex: Update to 0.49.
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* gnu/packages/cran.scm (r-tinytex): Update to 0.49.
Change-Id: Id4e0c5b470ecc67b7089c6781d0212d794a48e3d
2023-12-15 16:13:09 +01:00
68b9d4ac17
gnu: r-pinfsc50: Update to 1.3.0.
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* gnu/packages/cran.scm (r-pinfsc50): Update to 1.3.0.
Change-Id: Ibc463803ee8eafb241b41f1972d1dae71b33505c
2023-12-15 16:13:09 +01:00
3ef62e0af8
gnu: r-vctrs: Update to 0.6.5.
...
* gnu/packages/cran.scm (r-vctrs): Update to 0.6.5.
Change-Id: I2509d3365130232171f96b97f6de124a2301966e
2023-12-15 16:13:09 +01:00
4838ea3302
gnu: r-seriation: Update to 1.5.3.
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* gnu/packages/cran.scm (r-seriation): Update to 1.5.3.
Change-Id: Ib759dd8669bc45d5748a9bfbd39995960f63eb3d
2023-12-15 16:13:09 +01:00
c97374311b
gnu: r-processx: Update to 3.8.3.
...
* gnu/packages/cran.scm (r-processx): Update to 3.8.3.
Change-Id: Ica57c69983e8e20c7f66fd94910c296d63bb3ee0
2023-12-15 16:13:09 +01:00
5d22b61238
gnu: r-cli: Update to 3.6.2.
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* gnu/packages/cran.scm (r-cli): Update to 3.6.2.
Change-Id: Ieb1ee3bc4faa3c283ff77cb17af0372344ebad99
2023-12-15 16:13:09 +01:00
5eff6b4a6e
gnu: r-rvcg: Update to 0.22.2.
...
* gnu/packages/cran.scm (r-rvcg): Update to 0.22.2.
Change-Id: Idc968a2a423ec913759da9fa301302bbdaea5153
2023-12-15 16:13:09 +01:00
dae2e341f9
gnu: r-vcfr: Update to 1.15.0.
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* gnu/packages/cran.scm (r-vcfr): Update to 1.15.0.
Change-Id: I0973169b9d325f4464882a63753810660a640104
2023-12-15 16:13:09 +01:00
f57f333c82
gnu: r-ordinal: Update to 2023.12-4.
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* gnu/packages/cran.scm (r-ordinal): Update to 2023.12-4.
Change-Id: Ic0f89f6801a9040f133d0105fa8cee74080ea024
2023-12-15 16:13:09 +01:00
a3a4142bc3
gnu: r-stringdist: Update to 0.9.12.
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* gnu/packages/cran.scm (r-stringdist): Update to 0.9.12.
Change-Id: I5fdebeef4be2b159bd5e606afd2e9c7ca98b0ebe
2023-12-15 16:13:09 +01:00
aff3336f44
gnu: r-rmysql: Update to 0.10.27.
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* gnu/packages/cran.scm (r-rmysql): Update to 0.10.27.
Change-Id: I13553e2e23c0ae62ed22dbc91b526e7983be2548
2023-12-15 16:13:09 +01:00
26c3478a2b
gnu: r-lpsolve: Update to 5.6.20.
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* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.20.
Change-Id: I6bb12132895edb62ffb62514a00860e74f86f6b0
2023-12-15 16:13:08 +01:00
7a613a7139
gnu: r-bbmle: Update to 1.0.25.1.
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* gnu/packages/cran.scm (r-bbmle): Update to 1.0.25.1.
Change-Id: Iaf1342c02079b538e91c18e25bed9e7097e59c55
2023-12-15 16:13:08 +01:00
8d634d9426
gnu: r-rmumps: Update to 5.2.1-26.
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* gnu/packages/cran.scm (r-rmumps): Update to 5.2.1-26.
Change-Id: If83ffd590ef66a9ba4327d758872fdcf5ff9bf2c
2023-12-15 16:13:08 +01:00
b291adc192
gnu: r-lamw: Update to 2.2.3.
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* gnu/packages/cran.scm (r-lamw): Update to 2.2.3.
Change-Id: Ib6fa769027424a7655cd4af5eb92d5892d7ce2f5
2023-12-15 16:13:08 +01:00
0687da38c1
gnu: r-lambertw: Update to 0.6.9-1.
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* gnu/packages/cran.scm (r-lambertw): Update to 0.6.9-1.
Change-Id: I08d8110348c3f90327dcb3a976bfffe68cfe711f
2023-12-15 16:13:08 +01:00
757f9282df
gnu: r-sp: Update to 2.1-2.
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* gnu/packages/cran.scm (r-sp): Update to 2.1-2.
Change-Id: I5901df096356a7b728cb6204b3a6e28e76a6b511
2023-12-15 16:13:08 +01:00
7c62e715bc
gnu: r-ggally: Update to 2.2.0.
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* gnu/packages/cran.scm (r-ggally): Update to 2.2.0.
[propagated-inputs]: Remove r-forcats and r-reshape; add r-ggstats and r-magrittr.
Change-Id: I70ad817082ba836c8e50b012aaa0e74fbd986de3
2023-12-15 16:13:08 +01:00
7696d8869e
gnu: Add r-ggstats.
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* gnu/packages/cran.scm (r-ggstats): New variable.
Change-Id: I0fb9465e059839443913b6935779e9656b1cc9ab
2023-12-15 16:13:08 +01:00
7714e8fd32
gnu: Add r-broom-helpers.
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* gnu/packages/cran.scm (r-broom-helpers): New variable.
Change-Id: I01e43ef17159ba8802983b37e522c03d1a17ae10
2023-12-15 16:13:08 +01:00
780c8c9349
gnu: r-progress: Update to 1.2.3.
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* gnu/packages/cran.scm (r-progress): Update to 1.2.3.
Change-Id: I4a6ae755ea2021d32d4b0d1ca43a077af48c4e5b
2023-12-15 16:13:08 +01:00
7312e1060d
gnu: r-ctrdata: Update to 1.16.0.
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* gnu/packages/cran.scm (r-ctrdata): Update to 1.16.0.
[propagated-inputs]: Add r-readr, r-v8, and r-zip.
Change-Id: I766fc39274d465e50ede116f54d6b565b0f1e05e
2023-12-15 16:13:08 +01:00
5df0601f42
gnu: r-rcppspdlog: Update to 0.0.15.
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* gnu/packages/cran.scm (r-rcppspdlog): Update to 0.0.15.
Change-Id: I115a68824c3aadaf4fd1994c2b047df84f49ee95
2023-12-15 16:13:08 +01:00
4ff7edccc8
gnu: r-pls: Update to 2.8-3.
...
* gnu/packages/cran.scm (r-pls): Update to 2.8-3.
Change-Id: I672134fe44ac27a1f31ff37fc3318e30d40523e8
2023-12-15 16:13:08 +01:00
04023acf69
gnu: r-haven: Update to 2.5.4.
...
* gnu/packages/cran.scm (r-haven): Update to 2.5.4.
Change-Id: I2b695c09e033f00e10715119bbb4cba8666854dd
2023-12-15 16:13:08 +01:00
35d58172f5
gnu: r-ggmap: Update to 4.0.0.
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* gnu/packages/cran.scm (r-ggmap): Update to 4.0.0.
[propagated-inputs]: Remove r-rgooglemaps.
Change-Id: I5ff9480ef268cadca62434f29b102ef977be36ab
2023-12-15 16:13:08 +01:00
fa0659e7fc
gnu: r-sass: Update to 0.4.8.
...
* gnu/packages/cran.scm (r-sass): Update to 0.4.8.
Change-Id: Ie8c6ecd7e79549c613a85500d98598c42bc332ab
2023-12-15 16:13:08 +01:00
9e04bd09d3
gnu: r-jqr: Update to 1.3.3.
...
* gnu/packages/cran.scm (r-jqr): Update to 1.3.3.
Change-Id: I3415c097756c79934ecdd9b933ecfef2fa8efad1
2023-12-15 16:13:08 +01:00
80f2178bf1
gnu: r-rstpm2: Update to 1.6.3.
...
* gnu/packages/cran.scm (r-rstpm2): Update to 1.6.3.
[propagated-inputs]: Add r-mvtnorm.
Change-Id: If1b2717851f2da6cae135c43fc00afb2bcdb9f80
2023-12-15 16:13:08 +01:00
058e3a34f8
gnu: r-curl: Update to 5.2.0.
...
* gnu/packages/cran.scm (r-curl): Update to 5.2.0.
Change-Id: I793998e996e00eb7404d00d7d3f07bfa00d63940
2023-12-15 16:13:08 +01:00
1f70eaa334
gnu: r-htmlwidgets: Update to 1.6.4.
...
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.6.4.
Change-Id: I0bfc9559f93d97acb6d609d57c82bd7bc8127253
2023-12-15 16:13:08 +01:00
a02c770be4
gnu: r-jsonlite: Update to 1.8.8.
...
* gnu/packages/cran.scm (r-jsonlite): Update to 1.8.8.
Change-Id: I1604ece653980c17eef6cca6c1895bc2b4f3e2ec
2023-12-15 16:13:08 +01:00
882d1e7d8c
gnu: r-httpuv: Update to 1.6.13.
...
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.13.
Change-Id: I5e1269f481de948de0ec589975a15455d326e491
2023-12-15 16:13:08 +01:00
9cf5f6fc41
gnu: r-morpho: Update to 2.12.
...
* gnu/packages/cran.scm (r-morpho): Update to 2.12.
Change-Id: I7a1b3740db151be1526ef1ba4181721dd54c286b
2023-12-15 16:13:08 +01:00
4ff509356a
gnu: r-tgstat: Update to 2.3.25.
...
* gnu/packages/cran.scm (r-tgstat): Update to 2.3.25.
Change-Id: Ic9d0eed09874eacc2f1d8e7409621231b43b801f
2023-12-15 16:13:08 +01:00
80c81c5b94
gnu: r-tgp: Update to 2.4-22.
...
* gnu/packages/cran.scm (r-tgp): Update to 2.4-22.
Change-Id: I65274aa057b93fc8e98108953f8b7b3ee5f6a15d
2023-12-15 16:13:08 +01:00
96ce996cd4
gnu: r-mboost: Update to 2.9-9.
...
* gnu/packages/cran.scm (r-mboost): Update to 2.9-9.
Change-Id: Iae55fc9098627dd465cc0ee01e6b280c9239d5d1
2023-12-15 16:13:07 +01:00
dd16b4ac2b
gnu: r-philentropy: Update to 0.8.0.
...
* gnu/packages/cran.scm (r-philentropy): Update to 0.8.0.
Change-Id: I961746348d6d1683937f164feaa4ea943ca970db
2023-12-15 16:13:07 +01:00
bc10196ab2
gnu: r-ggside: Update to 0.2.3.
...
* gnu/packages/cran.scm (r-ggside): Update to 0.2.3.
[propagated-inputs]: Add r-cli.
Change-Id: Ifa75fca71615b3b31152b3ff27c20a759b9480fe
2023-12-15 16:13:07 +01:00
4f1c47ff64
gnu: r-ggpmisc: Update to 0.5.5.
...
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.5.5.
Change-Id: Ib25b40f4dd7e1ae5b5d417658246b80d0452de57
2023-12-15 16:13:07 +01:00
60cf193569
gnu: r-zcompositions: Update to 1.5.
...
* gnu/packages/cran.scm (r-zcompositions): Update to 1.5.
Change-Id: I176c60d21e091b12ca1592673c9869de9c360c7f
2023-12-15 16:13:07 +01:00
59e89bf8e6
gnu: r-v8: Update to 4.4.1.
...
* gnu/packages/cran.scm (r-v8): Update to 4.4.1.
Change-Id: I326dd72db909935820e345e2f881994c55443c7e
2023-12-15 16:13:07 +01:00
ca07e6e9e3
gnu: r-ggdist: Update to 3.3.1.
...
* gnu/packages/cran.scm (r-ggdist): Update to 3.3.1.
[propagated-inputs]: Add r-rcpp.
Change-Id: Ie60c46e98a2b5305d373b5a21df0625fe7b5d6c0
2023-12-15 16:13:07 +01:00
8e710b7d9d
gnu: r-dbscan: Update to 1.1-12.
...
* gnu/packages/cran.scm (r-dbscan): Update to 1.1-12.
Change-Id: If28f2657e8de4a5d893bb74f4559d17249acf714
2023-12-15 16:13:07 +01:00
c4dbd4b4f4
gnu: r-collapse: Update to 2.0.7.
...
* gnu/packages/cran.scm (r-collapse): Update to 2.0.7.
Change-Id: I46c2863921b7d11b0e7fc3a682ea238962fcc9c4
2023-12-15 16:13:07 +01:00
75e93cd0f5
gnu: r-brio: Update to 1.1.4.
...
* gnu/packages/cran.scm (r-brio): Update to 1.1.4.
Change-Id: I5dfce63a5686b1e0bf66c42c476ff9b04b0a828d
2023-12-15 16:13:07 +01:00
1354314cdf
gnu: r-abn: Update to 3.0.4.
...
* gnu/packages/bioconductor.scm (r-abn): Update to 3.0.4.
Change-Id: I15970d14205b32f254ecf2c5207e98d7289ac281
2023-12-15 16:13:07 +01:00
b6c482e860
gnu: r-fhtest: Update to 1.5.1.
...
* gnu/packages/bioconductor.scm (r-fhtest): Update to 1.5.1.
Change-Id: I08513b08ee2fc72ab00b372a013dbfa6ed064fc1
2023-12-15 16:13:07 +01:00
c544f5ce82
gnu: r-biomartr: Update to 1.0.7.
...
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.7.
Change-Id: I7f02a92d86506b4fbca950a13ed106753e1b7f76
2023-12-15 16:13:07 +01:00
633db77deb
gnu: r-arrow: Update to 14.0.0.2.
...
* gnu/packages/cran.scm (r-arrow): Update to 14.0.0.2.
Change-Id: Icff453a1aa0ad59d7e707a0fdfc23e3d4dd1f7c0
2023-12-15 16:13:07 +01:00
517fedb360
gnu: apache-arrow: Update to 14.0.0.
...
* gnu/packages/databases.scm (apache-arrow): Update to 14.0.0.
Change-Id: I5689b37fbfee2cb049cbaf351caed2e3cd07094c
2023-12-15 16:13:07 +01:00
8f72116222
gnu: r-interactivedisplay: Add missing input.
...
* gnu/packages/bioconductor.scm (r-interactivedisplay)[propagated-inputs]: Add
r-biocmanager.
Change-Id: I7e29c28202496ba58ec35adf03b77ac84691e492
2023-12-15 16:13:07 +01:00
837c91501e
gnu: r-dt: Update to 0.31.
...
* gnu/packages/statistics.scm (r-dt): Update to 0.31.
[source]: Simplify by using git repositories for extensions instead of
fetching every file from the datatables CDN.
[native-inputs]: Update to datatables-plugins 1.13.6.
Change-Id: Ibebd2ae1f3b4d51739b756ad808bebf2663e1009
2023-12-15 16:13:07 +01:00
2efa72be46
gnu: r-interactivedisplay: Add missing JavaScript sources.
...
* gnu/packages/bioconductor.scm (r-interactivedisplay)[source]: Update list of
minified JavaScript files to delete.
[arguments]: Use minify-build-system to process JavaScript files.
[native-inputs]: Add js-d3-v2; relabel js-datatables as js-datatables-1.10;
add js-datatables-1.9.
Change-Id: If8b6d9378680e9f69d71be56ce28add70b1a4564
2023-12-15 16:13:07 +01:00
8881398803
gnu: r-bookdown: Update to 0.37.
...
* gnu/packages/cran.scm (r-bookdown): Update to 0.37.
[arguments]: Use minify-build-system to process JavaScript.
Change-Id: I53ff5ef1527976e40e7caf8b34f77af7eb3e833f
2023-12-15 16:13:07 +01:00
b55d0a4abf
gnu: r-crosstalk: Update to 1.2.1.
...
* gnu/packages/cran.scm (r-crosstalk): Update to 1.2.1.
[source]: Add snippet to delete bundled minified JavaScript.
[arguments]: Use minify-build-system to minify JavaScript files from source;
add phase 'replace-bundled-minified-JavaScript.
[native-inputs]: Add esbuild and js-selectize.
Change-Id: I2a4a773d5f40a8f27e594e2f1b627624cab8755e
2023-12-15 16:13:07 +01:00
5374d0d89b
gnu: Add js-datatables-1.9.
...
* gnu/packages/javascript.scm (js-datatables-1.9): New variable.
Change-Id: I9b022e12119247c8385ebbcec07f54c4106155df
2023-12-15 16:13:07 +01:00
b3fd9eeb81
gnu: r-bslib: Update to 0.6.1.
...
* gnu/packages/cran.scm (r-bslib): Update to 0.6.1.
[source]: Update list of minified JavaScript to delete.
[arguments]: Use minify-build-system; update process-javascript phase.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Remove typescript-components; update js-bootstrap5-bundle.
Change-Id: I0aeae3f11a35211e6b429461042dbce2eca85313
2023-12-15 16:13:07 +01:00
39b8404168
gnu: r-pkgbuild: Update to 1.4.3.
...
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.4.3.
[propagated-inputs]: Remove r-crayon, r-prettyunits, and r-rprojroot.
Change-Id: I0b83188e69aae19ddc62d71da18358777ed9c454
2023-12-15 16:13:07 +01:00
1da863cc3b
gnu: r-wgcna: Update to 1.72-5.
...
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-5.
Change-Id: Ib9d3b0e6ba191839e4b22cb0b8f63e6b0e9d2baa
2023-12-15 16:13:07 +01:00
5ad3b5d786
gnu: r-spacetime: Update to 1.3-1.
...
* gnu/packages/cran.scm (r-spacetime): Update to 1.3-1.
Change-Id: I1fe54f97452c0dd738c6cfced56c406498de73c4
2023-12-15 16:13:07 +01:00
51702785da
gnu: r-openmx: Update to 2.21.11.
...
* gnu/packages/cran.scm (r-openmx): Update to 2.21.11.
Change-Id: I1349e0965508f42d183d2e705c356fdd3ac9faf0
2023-12-15 16:13:06 +01:00
4d272fa3a9
gnu: r-spacyr: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-spacyr): Update to 1.3.0.
[native-inputs]: Add r-r-rsp.
Change-Id: I999db8ad92b2d0799ffa4350847980db30c75409
2023-12-15 16:13:06 +01:00
af28dc137f
gnu: r-scales: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-scales): Update to 1.3.0.
[propagated-inputs]: Add r-cli and r-glue.
Change-Id: I37c4a09d6910f9d8885d253547808d3dc2761748
2023-12-15 16:13:06 +01:00
929079dfbc
gnu: r-pbdmpi: Update to 0.5-1.
...
* gnu/packages/cran.scm (r-pbdmpi): Update to 0.5-1.
Change-Id: Iede248c40a0a57bc5a23015745f426cd4485b38c
2023-12-15 16:13:06 +01:00
d6239e12d4
gnu: r-rjava: Update to 1.0-10.
...
* gnu/packages/cran.scm (r-rjava): Update to 1.0-10.
[source]: Delete bundled minified JavaScript.
[arguments]: Use minify-build-system in new phase
'replace-bundled-minified-JavaScript.
[native-inputs]: Add esbuild.
Change-Id: I6ca7724ea61f53995067cca8d6835fe061621567
2023-12-15 16:13:06 +01:00
259930c8eb
gnu: Add alsa-scarlett-gui.
...
* gnu/packages/music.scm (alsa-scarlett-gui): New variable.
Change-Id: Ia92a0be7e0f08cf42bc263f2c321b4617fa6935b
2023-12-15 15:12:06 +01:00
6b5c0e77a9
gnu: tascam-gtk: Update to 0.4-0.69fb86f.
...
* gnu/packages/music.scm (tascam-gtk): Update to 0.4-0.69fb86f.
[inputs]: Replace libxml++-2 with libxml++-3.
Change-Id: Iae8ff22ee7ee5888ff4d24209f2f09fbecf52889
2023-12-15 13:51:39 +01:00
90cb402fbb
gnu: Add libxml++-3.
...
* gnu/packages/gnome.scm (libxml++-3): New variable.
Change-Id: I2250766126f433b3f5dcc50cd7eaadec3acadad3
2023-12-15 13:51:39 +01:00
05c2afc5cb
gnu: dezyne: Update to 2.18.0.
...
* gnu/packages/dezyne.scm (dezyne): Update to 2.18.0.
[inputs]: Add boost.
[arguments]: Change assoc-ref memes to use gexps.
Change-Id: I1212de52db6c2b07122e756c68597b1f8ddbb313
2023-12-15 12:01:57 +01:00
e11b57de73
gnu: Add scmackerel.
...
* gnu/packages/dezyne.scm (scmackerel): New variable.
2023-12-15 12:01:55 +01:00
b681e339fa
services: Add rspamd-service-type.
...
* gnu/services/mail.scm (rspamd-service-type): New variable.
* gnu/tests/mail.scm (%test-rspamd): New variable.
* doc/guix.texi: Document it.
Co-authored-by: Saku Laesvuori <saku@laesvuori.fi>
Change-Id: I7196643f087ffe9fc91aab231b69d5ed8dc9d198
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-14 23:12:24 +01:00
7ce0c79e7a
gnu: pypy: Update to 7.3.13.
...
The validate-runpath error was previously reported in #57653 .
Version update fixes the existing build errors.
* gnu/packages/python.scm (pypy3): Update to 7.3.13.
[source]: Update origin URI.
[arguments]<#:validate-runpath>: Disable check.
[arguments]<#:phases>: Update directory paths.
Change-Id: Ic6ab7dd77e30fa85d6fa5f000f9aa2528951b81e
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-12-14 23:12:24 +01:00
4017555367
services: hpcguix-web: Add ‘configuration’ action.
...
* gnu/services/web.scm (hpcguix-web-shepherd-service): Define
‘config-file’ and use it. Add ‘actions’ field.
Change-Id: I085df403270039ede3c13f21a5d60682c7510e2e
2023-12-14 23:12:24 +01:00
1de1b975be
tests: childhurd: Prefer “-cpu max” over “-cpu host”.
...
“-cpu host” can sometimes, for unclear reasons, lead to this error from
QEMU 8.1.1:
qemu-system-x86_64: CPU model 'host' requires KVM or HVF
This commit fixes it.
Inspired by
<47b56e7c19
2023-12-14 23:12:24 +01:00
59d65f66c5
services: guix: Allow gexps evaluating to a list of build-machines.
...
* gnu/services/base.scm (guix-machines-files-installation): Handle
machines being a mixed list of build-machines and lists of
build-machines.
* doc/guix.texi (Base Services): Document it.
Change-Id: Ie404562ca0b564413233c3a624046da831893dc3
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-12-14 23:12:24 +01:00
a1347d09f1
gnu: libtorrent-rasterbar: Disable test_ssl test.
...
It times out in the ci.guix.gnu.org, so this commit disables it. It will be
re-enabled once solution is found.
* gnu/packages/bittorrent.scm
(libtorrent-rasterbar)[arguments]<#:phases>['check]: Disable test_ssl test.
Change-Id: Ib396fd8a1786e14baad72ae892bdd0fd3fe7a180
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-14 23:12:23 +01:00
ac61e9705f
gnu: txr: Remove obsolete fix.
...
* gnu/packages/lisp.scm (txr)[arguments]: Remove 'inhibit-doc-syms-generation'
phase.
Change-Id: Ibf29e28a82f1821cefbdc87e8bfdf3ffcd4219e5
2023-12-14 10:49:23 +01:00
8083c7abbf
gnu: xorg-server: Update to 21.1.10 [security fixes].
...
Fixes CVE-2023-6377 and CVE-2023-6478. See the X.Org security advisory at
<https://lists.x.org/archives/xorg-announce/2023-December/003435.html > for
details.
* gnu/packages/xorg.scm (xorg-server): Update to 21.1.10.
Change-Id: I20ecf1a2b9fc15cafc1c57e0fa726c7cf3096a78
2023-12-13 22:08:38 -05:00
0f5677ddf8
gnu: webkitgtk: Update to 2.42.3.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.42.3.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-08 20:49:48 +01:00
325c98094b
gnu: webkitgtk: Update to 2.42.2.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.42.2.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-08 20:49:42 +01:00
91e50cac91
gnu: webkitgtk-with-libsoup2: Use propagated inputs from GTK3.
...
This fixes an error in commits ee748c1df09bac1cad27https://bugs.gnu.org/66480#47 > for the full patch.
* gnu/packages/webkit.scm (webkitgtk-with-libsoup2)[propagated-inputs]: Use
package-propagated-inputs from webkitgtk-for-gtk3 rather than webkitgtk.
Co-authored-by: Vivien Kraus <vivien@planete-kraus.eu>
2023-12-08 20:49:39 +01:00
7c52509992
gnu: webkitgtk-with-libsoup2: Use keyword arguments for GTK3.
...
This fixes an error commit ee748c1df0https://bugs.gnu.org/66480#47 >.
* gnu/packages/webkit.scm (webkitgtk-with-libsoup2)[arguments]: Use
package-arguments of webkitgtk-for-gtk3 rather than webkitgtk.
Co-authored-by: Vivien Kraus <vivien@planete-kraus.eu>
2023-12-08 20:49:36 +01:00
f3da903b01
gnu: Make webkitgtk-next the new webkitgtk.
...
As of version 2.42.0, the WebKit 6.0 typelib is considered stable.
With GNOME itself moving to GTK4 as time marches on, we should reflect
the fact that this is the preferred Webkit for future applications.
* gnu/packages/webkit.scm (webkitgtk-next): Remove variable. Inline logic…
(webkitgtk): … here. Move old value …
(webkitgtk-for-gtk3): … here.
(webkitgtk-with-libsoup2): Inherit from webkitgtk-for-gtk3.
* gnu/packages/geo.scm (gnome-maps): Adjust accordingly.
* gnu/packages/gnome.scm (gnome-initial-setup, sushi)
(cambalache, devhelp, devhelp-with-libsoup2, gnome-online-accounts)
(gnome-online-accounts-3.44, evolution-data-server, evolution-data-server-3.44)
(lollypop, evolution, gnome-boxes, geary, komikku): Likewise.
* gnu/packages/guile-xyz.scm (guile-gi, nomad): Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Likewise.
* gnu/packages/mail.scm (balsa): Likewise.
* gnu/packages/mate.scm (atril): Likewise.
* gnu/packages/music.scm (ctrlr): Likewise.
* gnu/packages/rednotebook.scm (rednotebook): Likewise.
* gnu/packages/syndication.scm (gfeeds): Likewise.
* gnu/packages/telegram.scm (telegram-desktop): Likewise.
* gnu/packages/vnc.scm (remmina): Likewise.
* gnu/packages/web-browsers.scm (nyxt): Likewise.
2023-12-08 20:49:29 +01:00
42495b1886
gnu: webkitgtk: Update to 2.42.1.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.42.1.
[inputs]: Add libjxl.
2023-12-08 20:49:26 +01:00
06f25a9a85
gnu: xrdp: Update to 0.9.23.1.
...
* gnu/packages/rdesktop.scm (xrdp): Update to 0.9.23.1.
Change-Id: If5a01e38dc04bd013118d21ff11a46f3e7dddfd2
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-07 13:33:17 +02:00
31c9975e58
gnu: xeyes: Update to 1.3.0.
...
* gnu/packages/xdisorg.scm (xeyes): Update to 1.3.0.
[source]: Update file extension in URI.
Change-Id: Ibd4f554180bd7892e594c63f7c18808a6df7c049
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-07 13:14:39 +02:00
7e784c7495
gnu: dub: update to 1.33.0.
...
* gnu/packages/dlang.scm (dub): Update to 1.33.0.
Change-Id: Ie09f43329fa4a8d79f201f4b617e498d39adec6f
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-07 12:43:09 +02:00
4e7cb24118
gnu: ddcutil: Install pkgconfig file.
...
* gnu/packages/hardware.scm (ddcutil)[arguments]: Add a phase to install
the missing pkgconfig file.
Change-Id: Icd8c6c19e10c8dc426c5cd5020f0a209f0faa452
2023-12-07 01:26:25 +02:00
cc681b5657
gnu: libtorrent-rasterbar: Update to 2.0.9.
...
Update the package. Since other packages do depend on the previous
version (and according to their documentation do recommend it), the previous
version is exposed as libtorrent-rasterbar-1.2.
The v2.0.9 requires patching to get tests working. Sadly one of the changes
is to introduce new binary file, so it is fetched as an input and applied in a
phase. Snippet is used instead to do the rest of the patching.
* gnu/packages/bittorrent.scm (libtorrent-rasterbar)[version]: Update to
2.0.9.
[source]<snippet>: Patch test/test_copy_file.cpp.
[native-inputs]: Add the missing file (v2_empty_file.torrent).
[arguments]<#:phases>: And add a phase copying it into the correct place.
* gnu/packages/bittorrent.scm (libtorrent-rasterbar-1.2): New variable.
(qbittorrent)[inputs]: Use libtorrent-rasterbar-1.2.
* gnu/packages/enlightenment.scm (epour)[inputs]: Use
libtorrent-rasterbar-1.2.
Change-Id: Ifbbbf02a671f6a3db653499a7a5f2504fd23c255
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-06 23:50:05 +01:00
Ludovic Courtès
Jack Hill
Benjamin Slade
Mădălin Ionel Patrașcu
Bruno Victal
Michael Ford
Oleg Pykhalov
Mark H Weaver
Ricardo Wurmus
Efraim Flashner
spacecadet@purge.sh
Ekaitz Zarraga
Saku Laesvuori
Timotej Lazar
Jaeme Sifat
Hilton Chain
nafkhamdc
Maxim Cournoyer
Nicolas Graves
antlers
Clément Lassieur
Liliana Marie Prikler
Pierre-Henry Fröhring
Pierre-Henry Fröhring
Andrew Tropin
Leo Famulari
Tobias Geerinckx-Rice
Janneke Nieuwenhuizen
Thomas Ieong
Greg Hogan
Tomas Volf
Guillaume Le Vaillant
John Kehayias
Andre A. Gomes
Andy Tai
Hugo Nobrega