225f49fb30
gnu: r-champdata: Update to 2.34.0.
...
* gnu/packages/bioconductor.scm (r-champdata): Update to 2.34.0.
Change-Id: I658aab6c78df1fcbd7fb4d34df144635a2a10347
2024-01-22 13:54:45 +01:00
7b5db44490
gnu: r-celldex: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-celldex): Update to 1.12.0.
Change-Id: I565b21aafa46cb710a8acc3ab16b7905614e6838
2024-01-22 13:54:45 +01:00
1aac5e7bc8
gnu: r-breakpointrdata: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-breakpointrdata): Update to 1.20.0.
Change-Id: I1fe98a2e5fd8bf4b3106c7315dda8dee906c5152
2024-01-22 13:54:45 +01:00
6c1bb9047e
gnu: r-biscuiteerdata: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-biscuiteerdata): Update to 1.16.0.
[propagated-inputs]: Add r-genomicranges.
Change-Id: I5459630b266f04bbac50562cb134e9ca28bbc2d7
2024-01-22 13:54:45 +01:00
cd5a4ac6df
gnu: r-bladderbatch: Update to 1.40.0.
...
* gnu/packages/bioconductor.scm (r-bladderbatch): Update to 1.40.0.
Change-Id: I2d5ec797815dd0101da8692b1fa320020c33ab85
2024-01-22 13:54:45 +01:00
09ee801fe9
gnu: r-bcellviper: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-bcellviper): Update to 1.38.0.
Change-Id: Iaac28d6376364c0d0e30c29deb6df22c40b18b29
2024-01-22 13:54:45 +01:00
ee966f03d5
gnu: r-arrmdata: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-arrmdata): Update to 1.38.0.
Change-Id: Id1c900cd1a058057d18129c7f2d373bc4772d5cd
2024-01-22 13:54:45 +01:00
9512db59ab
gnu: r-aneufinderdata: Update to 1.30.0.
...
* gnu/packages/bioconductor.scm (r-aneufinderdata): Update to 1.30.0.
Change-Id: I94049747ac40bfe1926bfe6a34727c35e1fb6578
2024-01-22 13:54:45 +01:00
8f70c2352d
gnu: r-adductdata: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-adductdata): Update to 1.18.0.
Change-Id: I268b9dde5e1913d17e195a77005e3c28b41f6aca
2024-01-22 13:54:45 +01:00
b6fb97a250
gnu: r-pfam-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-pfam-db): Update to 3.18.0.
Change-Id: Iee6ad8fe9188cb6eb5df5f163e5af228a783b682
2024-01-22 13:54:45 +01:00
f16f8105e8
gnu: r-txdb-hsapiens-ucsc-hg38-knowngene: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene): Update to 3.18.0.
Change-Id: Ic11773dbb44ba5c90ea69142c03bbe7292ca03a6
2024-01-22 13:54:45 +01:00
5265421826
gnu: r-bsgenome-hsapiens-ucsc-hg38: Update to 1.4.5.
...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): Update to 1.4.5.
[propagated-inputs]: Add r-genomeinfodb.
Change-Id: I77c7e216286314619c05272a0baffb68dcd5a3e6
2024-01-22 13:54:45 +01:00
505aac07c4
gnu: r-org-mm-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): Update to 3.18.0.
Change-Id: Idee9907070a23dd79bf77e2d4a7e8ac17419826a
2024-01-22 13:54:45 +01:00
f13e407689
gnu: r-org-dr-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): Update to 3.18.0.
Change-Id: Icb7f74c83ff7189c7b02964fcb25bac6610fd790
2024-01-22 13:54:44 +01:00
8445ad15ec
gnu: r-org-dm-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): Update to 3.18.0.
Change-Id: Ic50a64af9d5b76a4c7cb8864e8e723c533218e19
2024-01-22 13:54:44 +01:00
0adeabcf53
gnu: r-org-ce-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): Update to 3.18.0.
Change-Id: Id83d4e64b80ce01abdb2fe06735e0af6b7ebac10
2024-01-22 13:54:44 +01:00
297fc0d76c
gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Update to 0.6.1.
...
* gnu/packages/bioconductor.scm (r-illuminahumanmethylation450kanno-ilmn12-hg19): Update to 0.6.1.
Change-Id: I142318c4854c75f27bcd1bfe4bfc389cbc8b3725
2024-01-22 13:54:44 +01:00
c5a934df85
gnu: r-go-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-go-db): Update to 3.18.0.
Change-Id: I90ff2421b742369847353aaf32cf8bc4651afda7
2024-01-22 13:54:44 +01:00
d9de950ac6
gnu: r-genomeinfodbdata: Update to 1.2.11.
...
* gnu/packages/bioconductor.scm (r-genomeinfodbdata): Update to 1.2.11.
Change-Id: Iacb39950f70c8affe457330df8b43260e71ab548
2024-01-22 13:54:44 +01:00
2ee9cce50f
gnu: r-bsgenome-mmusculus-ucsc-mm10: Update to 1.4.3.
...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): Update to 1.4.3.
Change-Id: Idbf573d2b4931550122119eed67879c2b13ed52f
2024-01-22 13:54:44 +01:00
6ee0d63dfc
gnu: r-reactome-db: Update to 1.86.2.
...
* gnu/packages/bioconductor.scm (r-reactome-db): Update to 1.86.2.
Change-Id: I8312c151f89ef27c5f75adbdf27c098e77f05453
2024-01-22 13:54:44 +01:00
287c5b085b
gnu: r-org-sc-sgd-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): Update to 3.18.0.
Change-Id: I1f7a497f0b36b1fe336343e215fe5c3f179b11ed
2024-01-22 13:54:44 +01:00
8ec5a25eff
gnu: r-org-bt-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-bt-eg-db): Update to 3.18.0.
Change-Id: I4385882eeb83326af88141b301f892632f6cf678
2024-01-22 13:54:44 +01:00
d2573f4e28
gnu: r-org-eck12-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-eck12-eg-db): Update to 3.18.0.
Change-Id: Ic8b25521c9a735522c69e3d696d8a514f8d6d17c
2024-01-22 13:54:44 +01:00
e775f704c8
gnu: Add r-bodymaprat.
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* gnu/packages/bioconductor.scm (r-bodymaprat): New variable.
Change-Id: I6843b957d5722f4c5460796ba41effee5717ae45
2024-01-21 23:54:23 +01:00
1d00a9edff
gnu: Add r-protgear.
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* gnu/packages/bioconductor.scm (r-protgear): New variable.
Change-Id: Ic6d5cae65d4f76df4488ee2462071ba68b50c184
2024-01-21 11:08:13 +01:00
0facea431a
gnu: Add r-netgsa.
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* gnu/packages/bioconductor.scm (r-netgsa): New variable.
Change-Id: I79b842854db80bbacdb8ff4c9fccfabdfc04d779
2024-01-21 08:33:56 +01:00
6648e34342
gnu: Add r-rcy3.
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* gnu/packages/bioconductor.scm (r-rcy3): New variable.
Change-Id: Ia295e8a174f65c8378ae83bdc1dde2877a48ff45
2024-01-21 08:30:40 +01:00
8ca35ca44f
gnu: r-cytolib: Update to 2.14.1.
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* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.14.1.
[source]: Do not unbundle included boost.
[arguments]: Remove.
[inputs]: Remove boost.
Change-Id: Ibe26b9df3f73e67fb9f53676a2c27a5aed714895
2024-01-21 00:17:45 +01:00
9072f27f5d
gnu: r-org-hs-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): Update to 3.18.0.
Change-Id: Iaba83a413858a95e81b6488a2f8cde648f0bdeed
2024-01-20 19:52:40 +01:00
d441454ba8
gnu: Add r-methylclockdata.
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* gnu/packages/bioconductor.scm (r-methylclockdata): New variable.
Change-Id: Id76373a9aec8276dcfd1ec3428d2ce9c81cc51d2
2024-01-20 19:52:24 +01:00
2b3a21c55f
gnu: Add r-experimenthubdata.
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* gnu/packages/bioconductor.scm (r-experimenthubdata): New variable.
Change-Id: I5faf26f483898b162bc1f863a4aceb6f46c52c18
2024-01-20 19:52:05 +01:00
c4838027b4
gnu: Add r-jaspar2016.
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* gnu/packages/bioconductor.scm (r-jaspar2016): New variable.
Change-Id: Ib2970791207b426c39bd0226e01107a35fec0bb2
2024-01-20 19:50:13 +01:00
6f93502ced
gnu: Add r-genomicstate.
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* gnu/packages/bioconductor.scm (r-genomicstate): New variable.
Change-Id: I1b86c8e849af7b69b5fa9ea2a0e43b4e3e1850b2
2024-01-20 19:45:26 +01:00
c410d4e268
gnu: Add r-ensdb-hsapiens-v79.
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* gnu/packages/bioconductor.scm (r-ensdb-hsapiens-v79): New variable.
Change-Id: I773615df66194ddb195f013f7000d175ac07d095
2024-01-20 19:45:26 +01:00
eb1d80ac77
gnu: Add r-trnadbimport.
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* gnu/packages/bioconductor.scm (r-trnadbimport): New variable.
Change-Id: I5a232b50c08ef999f691566ccf5c0fbaf0eb21ea
2024-01-19 23:55:43 +01:00
74ce9d7e3b
gnu: Add r-trna.
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* gnu/packages/bioconductor.scm (r-trna): New variable.
Change-Id: Ifce902910fa75ddc471d8a25cc974307c19fd1d0
2024-01-19 23:55:43 +01:00
1d56a24509
gnu: Add r-modstrings.
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* gnu/packages/bioconductor.scm (r-modstrings): New variable.
Change-Id: Ia61816213a7d128ab50a9ae2b2c8879e6ac00499
2024-01-19 23:55:43 +01:00
5c10649a50
gnu: Add r-structstrings.
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* gnu/packages/bioconductor.scm (r-structstrings): New variable.
Change-Id: I9759520a03ee8178432591c48bf56fb25a379f27
2024-01-19 23:55:43 +01:00
d8c718d44c
gnu: Add r-flames.
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* gnu/packages/bioconductor.scm (r-flames): New variable.
Change-Id: I551a8f9d7de16e2281898b9541572dd244aadc36
2024-01-19 23:55:43 +01:00
fdc6c6e29f
gnu: Add r-sictools.
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* gnu/packages/bioconductor.scm (r-sictools): New variable.
Change-Id: I6d6f821f054ff7fad190eb495eef7c73608d46d7
2024-01-18 23:10:39 +01:00
f1aaaf2ac1
gnu: r-tximeta: Update to 1.20.2.
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* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.20.2.
Change-Id: I166ca1f24ecef8067f36a35a140dff345fdab7a0
2024-01-18 16:01:55 +01:00
b19e208c17
gnu: r-basilisk: Update to 1.14.2.
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* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.14.2.
Change-Id: I9524ac5f52107c38b3c1172f3083836c7eabac99
2024-01-18 16:01:55 +01:00
cde5a13151
gnu: r-scran: Update to 1.30.1.
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* gnu/packages/bioconductor.scm (r-scran): Update to 1.30.1.
Change-Id: I4a2784c87fdaa09a370c4d46101dbb569bcc39ab
2024-01-18 16:01:54 +01:00
eee867139c
gnu: r-xcms: Update to 4.0.2.
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* gnu/packages/bioconductor.scm (r-xcms): Update to 4.0.2.
Change-Id: I1fe358bb287acb2810b83c383b0cd1b28e8c97b5
2024-01-18 16:01:54 +01:00
a162ff0fa4
gnu: r-genomicalignments: Update to 1.38.2.
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* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.38.2.
Change-Id: Ia521daa60db1fab67d77be2fddf356e6e4950efd
2024-01-18 16:01:54 +01:00
5ad5cb8c6e
gnu: r-edger: Update to 4.0.9.
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* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.9.
Change-Id: I253e9e2a5675b13e7947601a8726bea8aad63792
2024-01-18 16:01:54 +01:00
c64c5a33b2
gnu: r-dss: Update to 2.50.1.
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* gnu/packages/bioconductor.scm (r-dss): Update to 2.50.1.
Change-Id: Ief667e0b83ae2220900d021ebe93d27c4747c91d
2024-01-18 16:01:54 +01:00
e3efa67a2e
gnu: r-densvis: Update to 1.12.1.
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* gnu/packages/bioconductor.scm (r-densvis): Update to 1.12.1.
Change-Id: I52383b9b530fdf0fe262752d639c9f2834e70fd0
2024-01-18 16:01:54 +01:00
85cc64bfb8
gnu: r-animalcules: Update to 1.18.2.
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* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.18.2.
[propagated-inputs]: Remove r-biomformat, r-glmnet, and r-plotroc; add r-rocit.
Change-Id: Idd769a9608154b66871a38701a49e84f008f849c
2024-01-18 16:01:54 +01:00
Ricardo Wurmus