db96cc0ba2
gnu: Add r-papaja.
...
* gnu/packages/cran.scm (r-papaja): New variable.
Co-authored-by: Lars-Dominik Braun <lars@6xq.net>
Change-Id: Ib5b3a6ff8d52052cf135b2ba36cad3ce295ed6d4
2024-01-24 13:02:01 +01:00
d5e7ad7188
gnu: Add r-tinylabels.
...
* gnu/packages/cran.scm (r-tinylabels): New variable.
Change-Id: Ie86de4daaf132cd32f896573be747f35e725258e
2024-01-24 13:01:52 +01:00
90b9cb1298
gnu: Add r-rmdfiltr.
...
* gnu/packages/cran.scm (r-rmdfiltr): New variable.
Change-Id: I59b92e9364ca4e74a98b80b6cca1a883ab3caec3
2024-01-24 13:01:41 +01:00
420692482f
gnu: python-chaospy: Ignore deprecation warnings.
...
* gnu/packages/statistics.scm (python-chaospy)[arguments]: Add phase
'dont-treat-deprecation-warnings-as-error.
Change-Id: Id06404f9e47f7084fefc2e72032882d49e5b546b
2024-01-24 12:49:29 +01:00
43a82ad545
gnu: pynac: Update to 0.7.29.
...
* gnu/packages/sagemath.scm (pynac): Update to 0.7.29.
Change-Id: I3bf2675aea9d8a07fdcfa08471c9d1ca7725e1f7
2024-01-24 12:31:21 +01:00
afd0fe50b0
gnu: python-pyts: Update to 0.13.0.
...
* gnu/packages/python-science.scm (python-pyts): Update to 0.13.0.
[build-system]: Use pyproject-build-system.
[arguments]: Remove custom 'check phase; enable all tests.
[propagated-inputs]: Remove python-matplotlib.
Change-Id: Iafcc047d8bb14e1eef514fd92aa53f8fda38eab0
2024-01-24 11:34:35 +01:00
6a22f65d66
gnu: python-scikit-learn-extra: Update to 0.3.0-1.0f95d8d.
...
* gnu/packages/machine-learning.scm (python-scikit-learn-extra): Update to
0.3.0-1.0f95d8d.
[arguments]: Move test flags out of 'check phase and to #:test-flags.
[propagated-inputs]: Add python-packaging.
Change-Id: I4081a9364a0646d0c6960a3d155315e8eff8af59
2024-01-24 11:34:35 +01:00
90f9528748
gnu: nyxt: Update to 3.11.1.
...
* gnu/packages/web-browsers.scm (nyxt): Update to 3.11.1.
[inputs]: Remove sbcl-fset and sbcl-mk-string-metrics. Add gst-libav,
gst-plugins-bad, gst-plugins-base, gst-plugins-good, gst-plugins-ugly.
[arguments]: Update 'configure-tests' phase.
[home-page]: Update URL.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: If35d6f0153339b311057bea05562fefb215c3f0d
2024-01-24 11:18:02 +01:00
8aa3ae15dd
gnu: cl-lass: Update to 0.6.0-1.1f2418d.
...
* gnu/packages/lisp-xyz.scm (sbcl-lass): Update to 0.6.0-1.1f2418d.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Change-Id: I51dfe84b9194b4d94d76502ffd47f88cbc1583fb
2024-01-24 11:18:02 +01:00
3419c216b4
gnu: python-pydicom: Update to 2.4.4.
...
* gnu/packages/python-science.scm (python-pydicom): Update to 2.4.4.
Change-Id: I996115fb3bdf0bd61d2b2dcdb2500b31ce104597
2024-01-23 23:57:32 +00:00
b537437af7
gnu: python-pydicom: Simplify package style.
...
* gnu/packages/python-science.scm (python-pydicom)[build-system]: Swap
to pyproject-build-system.
[description]: Simplify wording, indent.
Change-Id: I7ef413ea2da6cbb83eb33424c559f7ac5ed549cb
2024-01-23 23:54:44 +00:00
5a616cc14b
gnu: python-pynetdicom: Simplify package style.
...
* gnu/package/python-science.scm (python-pynetdicom)[build-system]: Swap
to pyproject-build-system.
[description]: Simplify wording, indent.
Change-Id: If4e80d06edb0080685d0695f30abc2f9db669f45
2024-01-23 23:51:48 +00:00
e71abbc643
gnu: Add python-pynetdicom.
...
* gnu/packages/python-science.scm (python-pynetdicom): New variable.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-23 23:38:02 +00:00
c376298c7c
gnu: Add flash.
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* gnu/packages/bioinformatics.scm (flash): New variable.
Change-Id: Id657ba7850031ad24b4333b6bc79401511e00a85
2024-01-23 23:47:31 +01:00
825b3ca763
gnu: Add isolator.
...
* gnu/packages/bioinformatics.scm (isolator): New variable.
Change-Id: I950baca5b6898576f358b3364b1fe541b3333298
2024-01-23 23:43:19 +01:00
3aa60e4096
ci: Don't cross compile to or1k-elf.
...
* gnu/ci.scm (cross-jobs)[pointless?]: Don't build any packages for or1k-elf.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
Change-Id: I294429d5318b94fb8e7780a37f3608b5321cf6ca
2024-01-23 21:45:36 +01:00
b9a5c50d8c
gnu: Add metal.
...
* gnu/packages/bioinformatics.scm (metal): New variable.
Change-Id: I70fd30c18303f61a9f6720e70d4b4e57140a7140
2024-01-23 21:41:58 +01:00
25f0964c3e
gnu: Add randfold.
...
* gnu/packages/bioinformatics.scm (randfold): New variable.
Change-Id: If2cea9c8d5323296015dc21ea7a3d1b677ae2798
2024-01-23 21:31:51 +01:00
ebad9d6c0e
gnu: Add python-pyfasta.
...
* gnu/packages/bioinformatics.scm (python-pyfasta): New variable.
Change-Id: Ib2ab0a6eb250309633d5be33c18409227bce84ba
2024-01-23 21:26:50 +01:00
f7373261e9
gnu: Add python-fcsparser.
...
* gnu/packages/bioinformatics.scm (python-fcsparser): New variable.
Change-Id: I87ed7f10bbfdf7d689cb6289a5f5ad31872f9de0
2024-01-23 21:22:45 +01:00
469405375c
gnu: Add lsgkm.
...
* gnu/packages/bioinformatics.scm (lsgkm): New variable.
Change-Id: I0ea35354c7856e7425567cd4ac27ab7fc2ab0d9e
2024-01-23 21:18:07 +01:00
648085dab6
gnu: icecat: Update to 115.7.0-guix0-preview1 [security fixes].
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Includes fixes for CVE-2024-0741, CVE-2024-0742, CVE-2024-0746,
CVE-2024-0747, CVE-2024-0749, CVE-2024-0750, CVE-2024-0751,
CVE-2024-0753, and CVE-2024-0755.
* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2024-01-23 11:09:02 -05:00
40fb160a5e
Revert "gnu: source-highlight: Wrap scripts."
...
This package causes the rebuild of more than 9000 packages.
This reverts commit 367bc2d198
2024-01-23 17:33:54 +02:00
e3f4ab49b1
gnu: kubo: Update to 0.18.0.
...
* gnu/packages/ipfs.scm (kubo): Update to 0.18.0.
[inputs]: Add go-github-com-gorilla-mux.
Change-Id: I4eccdfcf9eadbdf25728fcca766c5238efb0d57f
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-23 14:07:01 +00:00
367bc2d198
gnu: source-highlight: Wrap scripts.
...
* gnu/packages/pretty-print.scm (source-highlight)[arguments]: Add a
phase to wrap shell scripts so they can find the source-hightlight
binary.
[inputs]: Add guile-3.0.
Change-Id: Ia8d006d969385210d5c82b4a0dd1f78178306ac2
2024-01-23 16:04:42 +02:00
fbeae77ae6
gnu: trurl: Update to 0.9.
...
* gnu/packages/curl.scm (trurl): Update to 0.9.
Change-Id: Ieb0f19e6d48897dceb32e317613a301f521c9b94
2024-01-23 14:01:51 +00:00
d3129b3f1e
gnu: Add eddylab-squid.
...
* gnu/packages/bioinformatics.scm (eddylab-squid): New variable.
Change-Id: Icb02f42fc95d2001a639e22608a01ef9074158bc
2024-01-23 13:52:36 +01:00
6a82745746
gnu: Add python-magic-impute.
...
* gnu/packages/bioinformatics.scm (python-magic-impute): New variable.
Change-Id: Iba5240e9920a1045078c736553cb1d56069963b5
2024-01-23 13:42:55 +01:00
1bdc4eeb46
gnu: Add python-graphtools.
...
* gnu/packages/graph.scm (python-graphtools): New variable.
Change-Id: If08b1460447702f7ec2e64f013a52a7065076b01
2024-01-23 13:42:55 +01:00
a313875476
gnu: Add python-tasklogger.
...
* gnu/packages/python-xyz.scm (python-tasklogger): New variable.
Change-Id: I53319b70b7788090e8873a912d7c56044c0bb5b2
2024-01-23 13:36:48 +01:00
561d429aa4
gnu: python-nose2: Update to 0.14.0.
...
* gnu/packages/check.scm (python-nose2): Update to 0.14.0.
[native-inputs]: Remove python-coverage.
[propagated-inputs]: Remove python-six.
Change-Id: I15a30723fe49cca9929524e543d12c9e2f4b02ca
2024-01-23 13:36:47 +01:00
a6b6d1bd6a
gnu: python-scikit-learn: Disable one test.
...
This test fails with the upgrade of scipy.
* gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]: Disable
test_singular_matrix test.
Change-Id: I47627403826bb5c52f4d578399c7cabaa3f8838d
2024-01-23 13:36:47 +01:00
123c880fe9
gnu: Add python-pygsp.
...
* gnu/packages/graph.scm (python-pygsp): New variable.
Change-Id: I8dd195216617e5cdb4a7453ecbe23cd9ff9e06a3
2024-01-23 13:36:47 +01:00
6e835cd380
gnu: Add r-scenic.
...
* gnu/packages/bioinformatics.scm (r-scenic): New variable.
Change-Id: Iff1f501a406ba1a12e49093a575e03facc98f303
2024-01-23 13:36:47 +01:00
994817bfdc
gnu: python-scipy: Update to 1.12.0.
...
* gnu/packages/python-science.scm (python-scipy): Update to 1.12.0.
[propagated-inputs]: Add python-jupytext, python-mpmath, python-mypy,
python-numpydoc, python-pydata-sphinx-theme, python-pydevtool,
python-rich-click, python-sphinx, python-threadpoolctl, and
python-typing-extensions; remove python-pyparsing.
[native-inputs]: Add python-hypothesis, python-pycodestyle, python-pytest-cov,
and python-pytest-xdist; remove python-threadpoolctl.
Change-Id: I81a4831e3d94c58416f7d35ec47de90370b88210
2024-01-23 13:36:47 +01:00
2eb061be79
gnu: r-desctools: Update to 0.99.53.
...
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.53.
Change-Id: I425b37907b51a93fafa193d217bdf68636f608a7
2024-01-23 13:36:47 +01:00
24d6410125
gnu: r-plotly: Update to 4.10.4.
...
* gnu/packages/statistics.scm (r-plotly): Update to 4.10.4.
Change-Id: Idd10685b1ab521056e0468f0c0c188543c11c96a
2024-01-23 13:36:47 +01:00
863ba4b830
gnu: r-xml: Update to 3.99-0.16.1.
...
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.16.1.
Change-Id: I2936eac03ec20b091e45b920f946d92028099973
2024-01-23 13:36:47 +01:00
b4a255c2fb
gnu: r-rsqlite: Update to 2.3.5.
...
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.5.
Change-Id: I43e95bc4ff0b0dc36cf9f3de1705d63bc5681286
2024-01-23 13:36:47 +01:00
bf933e4f11
gnu: r-roxygen2: Update to 7.3.1.
...
* gnu/packages/statistics.scm (r-roxygen2): Update to 7.3.1.
Change-Id: I5d23ee576beb4dc4dc1e49d13cc38ffef0d33512
2024-01-23 13:36:47 +01:00
4fa0d97e99
gnu: r-maldiquant: Update to 1.22.2.
...
* gnu/packages/cran.scm (r-maldiquant): Update to 1.22.2.
Change-Id: Ia483cff36bb3a2cbf4b691bb4832ce98757aabe0
2024-01-23 13:36:47 +01:00
0a733805d8
gnu: r-modeldata: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-modeldata): Update to 1.3.0.
Change-Id: Ibaef5366948e9ca45325d279a99f14417ca43e8e
2024-01-23 13:36:47 +01:00
9eb92d55e0
gnu: r-yardstick: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-yardstick): Update to 1.3.0.
[propagated-inputs]: Add r-withr.
Change-Id: I00a5d74cca4396e685df32f85d998004a3e94edc
2024-01-23 13:36:47 +01:00
a9de282219
gnu: r-lightgbm: Update to 4.3.0.
...
* gnu/packages/cran.scm (r-lightgbm): Update to 4.3.0.
Change-Id: I9da6fbcf9558f1ed47b41abd7183f3c53ba1ec67
2024-01-23 13:36:47 +01:00
ad552bf927
gnu: r-rstanarm: Update to 2.32.1.
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* gnu/packages/cran.scm (r-rstanarm): Update to 2.32.1.
Change-Id: Ib83276a66add397aeacd830803f94f713f0c22e3
2024-01-23 13:36:47 +01:00
fe495a9c64
gnu: r-matrixextra: Update to 0.1.15.
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* gnu/packages/cran.scm (r-matrixextra): Update to 0.1.15.
Change-Id: I72c274e3075cc40d0f6aafb8199a4594c1a518c6
2024-01-23 13:36:47 +01:00
3995f40cd7
gnu: r-graphlayouts: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-graphlayouts): Update to 1.1.0.
Change-Id: I5056c2158af15aeed9d5b53a52149e67d6d50b56
2024-01-23 13:36:47 +01:00
306fa840ed
gnu: r-mcmcpack: Update to 1.7-0.
...
* gnu/packages/cran.scm (r-mcmcpack): Update to 1.7-0.
Change-Id: I2e480dee05c23158b9ab58de5f9a90e623a7f6b2
2024-01-23 13:36:47 +01:00
899ee468d3
gnu: r-ggfun: Update to 0.1.4.
...
* gnu/packages/cran.scm (r-ggfun): Update to 0.1.4.
Change-Id: I08cf695cd03bf28aaa2f2b7b4a35c6632a7027c4
2024-01-23 13:36:47 +01:00
495372ea1f
gnu: r-rmpfr: Update to 0.9-5.
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* gnu/packages/cran.scm (r-rmpfr): Update to 0.9-5.
Change-Id: I32ba06d98406989aca7129f9f647e836e06663f8
2024-01-23 13:36:47 +01:00
da3bd82788
gnu: r-bigrquery: Update to 1.5.0.
...
* gnu/packages/cran.scm (r-bigrquery): Update to 1.5.0.
[propagated-inputs]: Remove r-assertthat, r-glue, r-progress, r-rcpp, and r-withr; add
r-clock and r-cpp11.
Change-Id: I3f1eb2e32ce901231303a2eb905e8fd7aa0f995a
2024-01-23 13:36:47 +01:00
ef3b092587
gnu: r-fmsb: Update to 0.7.6.
...
* gnu/packages/cran.scm (r-fmsb): Update to 0.7.6.
Change-Id: I9acec8e49ba036f263223a37c53cf9d4a82ba59f
2024-01-23 13:36:47 +01:00
617c41f418
gnu: r-quickjsr: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-quickjsr): Update to 1.1.0.
Change-Id: Ic2fb19a11c781c25b63cc2ed1bf185201aca0fe8
2024-01-23 13:36:47 +01:00
e2284fa77d
gnu: r-cmplot: Update to 4.5.1.
...
* gnu/packages/cran.scm (r-cmplot): Update to 4.5.1.
Change-Id: I34faf9e7c4b786aaae660ba18c65b429304db601
2024-01-23 13:36:47 +01:00
e8a7227004
gnu: r-nodbi: Update to 0.10.0.
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* gnu/packages/cran.scm (r-nodbi): Update to 0.10.0.
[propagated-inputs]: Add r-r-utils and r-v8.
Change-Id: I1cc2c0c99f15cde415c90fa8959f3e0ffc546458
2024-01-23 13:36:47 +01:00
4438bfd898
gnu: r-overlap: Update to 0.3.9.
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* gnu/packages/cran.scm (r-overlap): Update to 0.3.9.
[propagated-inputs]: Add r-suntools.
Change-Id: I3dc9817e0c7a5b4c4422e285aa5ccf4320047bd6
2024-01-23 13:36:47 +01:00
4dda10ae21
gnu: r-import: Update to 1.3.2.
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* gnu/packages/cran.scm (r-import): Update to 1.3.2.
Change-Id: Ic78d705b104683e14f3b1848ba0218bfcc6e8ab1
2024-01-23 13:36:47 +01:00
f4eb36050e
gnu: r-xts: Update to 0.13.2.
...
* gnu/packages/cran.scm (r-xts): Update to 0.13.2.
Change-Id: I0f551d91a7012fabb117160c54e9c17883a48ca9
2024-01-23 13:36:47 +01:00
3d0fa8fb65
gnu: r-psych: Update to 2.4.1.
...
* gnu/packages/cran.scm (r-psych): Update to 2.4.1.
Change-Id: Iebac111c7dd7a8bab9df6789c9861e499b4439d3
2024-01-23 13:36:47 +01:00
b12217b3d0
gnu: r-timechange: Update to 0.3.0.
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* gnu/packages/cran.scm (r-timechange): Update to 0.3.0.
Change-Id: I5c8dce37f2f268145b7288845ef0c7d1115eb445
2024-01-23 13:36:47 +01:00
254eb0d3fd
gnu: r-ctrdata: Update to 1.17.0.
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* gnu/packages/cran.scm (r-ctrdata): Update to 1.17.0.
[propagated-inputs]: Add r-digest.
Change-Id: I505ea3605193eb461001c8e58cd9ef8d725d8f63
2024-01-23 13:36:46 +01:00
5082ea45f9
gnu: r-ps: Update to 1.7.6.
...
* gnu/packages/cran.scm (r-ps): Update to 1.7.6.
Change-Id: Id7ef2ce2c709c8bffb7d3257324390400d55b29e
2024-01-23 13:36:46 +01:00
e7aee059ad
gnu: r-paletteer: Update to 1.6.0.
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* gnu/packages/cran.scm (r-paletteer): Update to 1.6.0.
Change-Id: Iff3c0636541bf3deb7a50706a62a44331a77e820
2024-01-23 13:36:46 +01:00
704b793d82
gnu: r-gensa: Update to 1.1.14.
...
* gnu/packages/cran.scm (r-gensa): Update to 1.1.14.
Change-Id: I6557eeb5f277908a25ded34321153ceddc927a09
2024-01-23 13:36:46 +01:00
d7a7054b7e
gnu: r-shadowtext: Update to 0.1.3.
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* gnu/packages/cran.scm (r-shadowtext): Update to 0.1.3.
Change-Id: I771671f689c247cbb7ade0ad0d2b78a6e28514ff
2024-01-23 13:36:46 +01:00
2e08d0d631
gnu: Add r-suntools.
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* gnu/packages/cran.scm (r-suntools): New variable.
Change-Id: Id1cb0828e8046ce635edc124c3f99bc891806cdd
2024-01-23 13:36:46 +01:00
f0d8d59807
gnu: r-antiword: Update to 1.3.2.
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* gnu/packages/cran.scm (r-antiword): Update to 1.3.2.
[source]: Simplify snippet.
[arguments]: Remove trailing #T from build phase.
[synopsis]: Change capitalization.
[description]: Use complete sentences.
Change-Id: I0cffbda247dd57462f89c20a94773f871a029b60
2024-01-23 13:36:46 +01:00
6f6cfb8365
gnu: python-tdda: Remove relax-requirements phase.
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* gnu/packages/python-science.scm (python-tdda)[arguments]<#:phases>: Remove relax-requirements phase.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-22 21:48:28 +00:00
ffc5fefce3
gnu: python-evdev: Enable tests.
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* gnu/packages/linux.scm (python-evdev): Enable tests and apply new
package style.
[source]: Use git checkout which provides tests.
[build-system]: Swap to pyproject-build-system.
[arguments]<#:test-flags>: Silent tests requiring access to /dev/uinput.
<#:phases>: Remove trailing #t from lambda.
[native-inputs]: Add python-pytest.
Change-Id: I9474459428d94eefa501458d62f24c6918958515
2024-01-22 21:31:32 +00:00
014d0541ae
gnu: python-evdev: Update to 1.5.0.
...
* gnu/packages/linux.scm (python-evdev): Update to 1.5.0.
Change-Id: Id83c621f31222ebfb4848366b94e1f16c75742aa
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-22 21:03:15 +00:00
40cff060fd
gnu: Add emacs-coterm.
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* gnu/packages/emacs-xyz.scm (emacs-coterm): New variable.
Change-Id: Ib96078fa906242dd532a0c949de3049b92804891
2024-01-22 21:40:09 +01:00
10a1935963
gnu: Remove linux-libre 4.14.
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* gnu/packages/linux.scm (linux-libre-4.14-version,
linux-libre-4.14-gnu-revision, deblob-scripts-4.14,
linux-libre-4.14-pristine-source, linux-libre-4.14-source,
linux-libre-headers-4.14, linux-libre-4.14, linux-libre-arm-generic-4.14,
linux-libre-arm-omap2plus-4.14): Remove variables.
* gnu/packages/aux-files/linux-libre/4.14-arm.conf,
gnu/packages/aux-files/linux-libre/4.14-i686.conf,
gnu/packages/aux-files/linux-libre/4.14-x86_64.conf: Delete files.
* Makefile.am (AUX_FILES): Remove aforementioned .conf files.
* gnu/tests/base.scm (%test-linux-libre-4.14): Remove variable.
Change-Id: I40393b5f46b989848d569c929f1d9c986736553e
2024-01-22 13:24:20 -05:00
29c26a8d30
gnu: moonlight-qt: Update to 5.0.1.
...
* gnu/packages/games.scm (moonlight-qt): Update to 5.0.1.
[arguments]<#:phases>: Update moonlight-qt.pro file substitute to not include
bundled h264bitstream library.
Change-Id: I9c68f7c6de39a0d78c6ef5b48d2272cdf3f771b5
2024-01-22 19:12:43 +03:00
e677aceb5d
gnu: moonlight-common: Update to 5.0.1-1.5de4a5b.
...
* gnu/packages/games.scm (moonlight-common): Update to 5.0.1-1.5de4a5b.
Change-Id: I6b539162c0d57830d41059611746a7d376322345
2024-01-22 19:12:43 +03:00
d52d4b833a
gnu: h264bitstream: Update to 0.2.0-1.ae72f73.
...
* gnu/packages/video.scm (h264bitstream): Update to 0.2.0-1.ae72f73.
Change-Id: I0aa9422f236995086275c492a2093f2acb894ab1
2024-01-22 19:12:43 +03:00
9f80c86672
gnu: guile-goblins: Update to 0.12.0.
...
* gnu/packages/guile-xyz.scm (guile-goblins): Update to 0.12.0.
Change-Id: I0768ca6118c8b16ea6e5ae235dfefa7d28f727e3
2024-01-22 10:05:26 -05:00
1bdeec5d66
services: connman: Add 'connman-general-configuration'.
...
Currently connman has no main.conf as specified in 'man 5 connman.conf' which
would allow setting NetworkInterfaceBalcklist and other useful options.
This patch adds connman-general-configuration, serializes it and
passes to connmad with --config= flag.
All configuration fields are 'maybe-*' deliberately, to not disturb current
users and not require supporting configuration changes for connmand.
* gnu/services/networking.scm (<connman-general-configuration>): New
configuration record to represent main.conf for connmand.
(<connman-configuration>)[general-configuration]: New field.
(connman-shepherd-service): Honor it.
*doc/guix.texi (Networking Services): Add generated configuration.
Change-Id: I5d78f49e8b2d5e0b3cbd7b8b604e8a254b6397e8
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2024-01-22 09:51:32 -05:00
2b04ebaa74
gnu: cgit: Fix patch-absolute-file-names phase.
...
* gnu/packages/version-control.scm (cgit) [arguments]: Fix regexp in patch-absolute-file-names phase.
Change-Id: I06c624ba23bfd0b8ca45045d1d2155c53258047e
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2024-01-22 08:54:47 -05:00
bafc6efe48
gnu: r-flowstats: Update to 4.14.1.
...
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.14.1.
Change-Id: I0a5d93cb08d169759b3f3817ab9b68b76fd5883f
2024-01-22 13:54:46 +01:00
1849ed7487
gnu: r-flowworkspace: Update to 4.14.2.
...
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.2.
Change-Id: I7d47b89fedf207b930fc8bef6aedcbce4628a2d9
2024-01-22 13:54:46 +01:00
522a646714
gnu: r-gosemsim: Update to 2.28.1.
...
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.28.1.
[propagated-inputs]: Add r-yulab-utils.
Change-Id: Idf93e061ef43c2900a96fa9cafeaff95d13fa3be
2024-01-22 13:54:46 +01:00
500fc9e891
gnu: r-rhtslib: Update to 2.4.1.
...
* gnu/packages/bioconductor.scm (r-rhtslib): Update to 2.4.1.
Change-Id: If0da0bbfbbfcb2f41b354ba1772967f9fee778ca
2024-01-22 13:54:46 +01:00
c61e835022
gnu: r-edger: Update to 4.0.11.
...
* gnu/packages/bioconductor.scm (r-edger): Update to 4.0.11.
Change-Id: I27638e6082286fa6e7876ce29ecf272d88402946
2024-01-22 13:54:46 +01:00
2d331f9ba0
gnu: r-tximportdata: Update to 1.30.0.
...
* gnu/packages/bioconductor.scm (r-tximportdata): Update to 1.30.0.
Change-Id: Id02981fc94304cade5dbdc4c13a78d7155e62408
2024-01-22 13:54:46 +01:00
2c5ea54d89
gnu: r-tcgabiolinksgui-data: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): Update to 1.22.0.
Change-Id: Icb4d98fb51bea7d14500b84928c3cd8876161d7c
2024-01-22 13:54:46 +01:00
ab9f9b582e
gnu: r-sesamedata: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-sesamedata): Update to 1.20.0.
Change-Id: Idc8ff7679495ede0dd037ef393300c7fe4787610
2024-01-22 13:54:46 +01:00
196e1f9025
gnu: r-parathyroidse: Update to 1.40.0.
...
* gnu/packages/bioconductor.scm (r-parathyroidse): Update to 1.40.0.
Change-Id: I2a012832f1d0ea4468497ed82c528af10d660391
2024-01-22 13:54:46 +01:00
71c4d03835
gnu: r-curatedtcgadata: Update to 1.24.0.
...
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.24.0.
Change-Id: If094ca958ff73b6aecd39c3d91042e9e75eb2075
2024-01-22 13:54:46 +01:00
ffd1da975f
gnu: r-gagedata: Update to 2.40.0.
...
* gnu/packages/bioconductor.scm (r-gagedata): Update to 2.40.0.
Change-Id: Ifdbcee3c7c6c354530d62cc79f05cf30be432f3a
2024-01-22 13:54:46 +01:00
e9a99d768b
gnu: r-affydata: Update to 1.50.0.
...
* gnu/packages/bioconductor.scm (r-affydata): Update to 1.50.0.
Change-Id: I653e146ff884bd72771ed779c4d9d65b03a7fdd9
2024-01-22 13:54:46 +01:00
aef69bfc03
gnu: r-all: Update to 1.44.0.
...
* gnu/packages/bioconductor.scm (r-all): Update to 1.44.0.
Change-Id: I9f2817b571d2c42d57927370b51319e52388a3b5
2024-01-22 13:54:46 +01:00
1d0674befe
gnu: r-hsmmsinglecell: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): Update to 1.22.0.
Change-Id: I541a4637f7ec9b6e85e52c8f222002adef230a50
2024-01-22 13:54:46 +01:00
54efc5bd86
gnu: r-pasilla: Update to 1.30.0.
...
* gnu/packages/bioconductor.scm (r-pasilla): Update to 1.30.0.
Change-Id: I3d309814bc0237181540e1c84ad8feca34f2fcef
2024-01-22 13:54:45 +01:00
1deaa74a6f
gnu: r-msigdb: Update to 1.10.0.
...
* gnu/packages/bioconductor.scm (r-msigdb): Update to 1.10.0.
Change-Id: I32ad805ff92e7084eb682c239037978f183c323e
2024-01-22 13:54:45 +01:00
88beafd5dc
gnu: r-msdata: Update to 0.42.0.
...
* gnu/packages/bioconductor.scm (r-msdata): Update to 0.42.0.
Change-Id: I94953464f1c9ef0e361c68a69fdbc9b11f46c4f8
2024-01-22 13:54:45 +01:00
13c2e3c9e4
gnu: r-minfidata: Update to 0.48.0.
...
* gnu/packages/bioconductor.scm (r-minfidata): Update to 0.48.0.
Change-Id: I8485d570629d23b294a9ea4143a88ed91ae737af
2024-01-22 13:54:45 +01:00
cbb019eef6
gnu: r-mousegastrulationdata: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-mousegastrulationdata): Update to 1.16.0.
Change-Id: I18a4fe4dbbcf3cc7f19084170fc8280fd4d5e7cf
2024-01-22 13:54:45 +01:00
55b3f66131
gnu: r-macrophage: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-macrophage): Update to 1.18.0.
Change-Id: I51228161aac4cb10470aa2262fdc507a4cb903ec
2024-01-22 13:54:45 +01:00
0af8e69b32
gnu: r-italicsdata: Update to 2.40.0.
...
* gnu/packages/bioconductor.scm (r-italicsdata): Update to 2.40.0.
Change-Id: I55a0100167f98571a562c0ca5fddbe41afeaf3d7
2024-01-22 13:54:45 +01:00
f4f7b82c5e
gnu: r-illumina450probevariants-db: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-illumina450probevariants-db): Update to 1.38.0.
Change-Id: Ic5af6f5e7ba653edc5ed785f2b3e9d522e7586af
2024-01-22 13:54:45 +01:00
da790d92e5
gnu: r-hdcytodata: Update to 1.22.0.
...
* gnu/packages/bioconductor.scm (r-hdcytodata): Update to 1.22.0.
Change-Id: I06afd0ffdd8c1b77ce03e9aabe59f150c28e6141
2024-01-22 13:54:45 +01:00
c916f39b5c
gnu: r-genomationdata: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-genomationdata): Update to 1.34.0.
Change-Id: Ia8e4535efcdcbb0e706b1e9682594467ab8c2fda
2024-01-22 13:54:45 +01:00
8369898fb0
gnu: r-genelendatabase: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.38.0.
Change-Id: Idf120599c34af21cd3c5c854d434c93c702f0cd4
2024-01-22 13:54:45 +01:00
95c3baf59f
gnu: r-flowsorted-blood-epic: Update to 2.6.0.
...
* gnu/packages/bioconductor.scm (r-flowsorted-blood-epic): Update to 2.6.0.
Change-Id: I458aa7c0ac482d1e60d6afb66b236ea6886d7ce6
2024-01-22 13:54:45 +01:00
43e6cc3189
gnu: r-flowsorted-blood-450k: Update to 1.40.0.
...
* gnu/packages/bioconductor.scm (r-flowsorted-blood-450k): Update to 1.40.0.
Change-Id: Ia2d2ae18c80d3a4a7858026a424da1537d657782
2024-01-22 13:54:45 +01:00
4c4f07ca26
gnu: r-copyhelper: Update to 1.34.0.
...
* gnu/packages/bioconductor.scm (r-copyhelper): Update to 1.34.0.
Change-Id: I2cfa340e85fb723615295949ef614db1761f9c6e
2024-01-22 13:54:45 +01:00
f0591739ce
gnu: r-chromstardata: Update to 1.28.0.
...
* gnu/packages/bioconductor.scm (r-chromstardata): Update to 1.28.0.
Change-Id: I5146185d21a589b93152fe67df4e4a100a0b0a33
2024-01-22 13:54:45 +01:00
225f49fb30
gnu: r-champdata: Update to 2.34.0.
...
* gnu/packages/bioconductor.scm (r-champdata): Update to 2.34.0.
Change-Id: I658aab6c78df1fcbd7fb4d34df144635a2a10347
2024-01-22 13:54:45 +01:00
7b5db44490
gnu: r-celldex: Update to 1.12.0.
...
* gnu/packages/bioconductor.scm (r-celldex): Update to 1.12.0.
Change-Id: I565b21aafa46cb710a8acc3ab16b7905614e6838
2024-01-22 13:54:45 +01:00
1aac5e7bc8
gnu: r-breakpointrdata: Update to 1.20.0.
...
* gnu/packages/bioconductor.scm (r-breakpointrdata): Update to 1.20.0.
Change-Id: I1fe98a2e5fd8bf4b3106c7315dda8dee906c5152
2024-01-22 13:54:45 +01:00
6c1bb9047e
gnu: r-biscuiteerdata: Update to 1.16.0.
...
* gnu/packages/bioconductor.scm (r-biscuiteerdata): Update to 1.16.0.
[propagated-inputs]: Add r-genomicranges.
Change-Id: I5459630b266f04bbac50562cb134e9ca28bbc2d7
2024-01-22 13:54:45 +01:00
cd5a4ac6df
gnu: r-bladderbatch: Update to 1.40.0.
...
* gnu/packages/bioconductor.scm (r-bladderbatch): Update to 1.40.0.
Change-Id: I2d5ec797815dd0101da8692b1fa320020c33ab85
2024-01-22 13:54:45 +01:00
09ee801fe9
gnu: r-bcellviper: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-bcellviper): Update to 1.38.0.
Change-Id: Iaac28d6376364c0d0e30c29deb6df22c40b18b29
2024-01-22 13:54:45 +01:00
ee966f03d5
gnu: r-arrmdata: Update to 1.38.0.
...
* gnu/packages/bioconductor.scm (r-arrmdata): Update to 1.38.0.
Change-Id: Id1c900cd1a058057d18129c7f2d373bc4772d5cd
2024-01-22 13:54:45 +01:00
9512db59ab
gnu: r-aneufinderdata: Update to 1.30.0.
...
* gnu/packages/bioconductor.scm (r-aneufinderdata): Update to 1.30.0.
Change-Id: I94049747ac40bfe1926bfe6a34727c35e1fb6578
2024-01-22 13:54:45 +01:00
8f70c2352d
gnu: r-adductdata: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-adductdata): Update to 1.18.0.
Change-Id: I268b9dde5e1913d17e195a77005e3c28b41f6aca
2024-01-22 13:54:45 +01:00
b6fb97a250
gnu: r-pfam-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-pfam-db): Update to 3.18.0.
Change-Id: Iee6ad8fe9188cb6eb5df5f163e5af228a783b682
2024-01-22 13:54:45 +01:00
f16f8105e8
gnu: r-txdb-hsapiens-ucsc-hg38-knowngene: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene): Update to 3.18.0.
Change-Id: Ic11773dbb44ba5c90ea69142c03bbe7292ca03a6
2024-01-22 13:54:45 +01:00
5265421826
gnu: r-bsgenome-hsapiens-ucsc-hg38: Update to 1.4.5.
...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): Update to 1.4.5.
[propagated-inputs]: Add r-genomeinfodb.
Change-Id: I77c7e216286314619c05272a0baffb68dcd5a3e6
2024-01-22 13:54:45 +01:00
505aac07c4
gnu: r-org-mm-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): Update to 3.18.0.
Change-Id: Idee9907070a23dd79bf77e2d4a7e8ac17419826a
2024-01-22 13:54:45 +01:00
f13e407689
gnu: r-org-dr-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): Update to 3.18.0.
Change-Id: Icb7f74c83ff7189c7b02964fcb25bac6610fd790
2024-01-22 13:54:44 +01:00
8445ad15ec
gnu: r-org-dm-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): Update to 3.18.0.
Change-Id: Ic50a64af9d5b76a4c7cb8864e8e723c533218e19
2024-01-22 13:54:44 +01:00
0adeabcf53
gnu: r-org-ce-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): Update to 3.18.0.
Change-Id: Id83d4e64b80ce01abdb2fe06735e0af6b7ebac10
2024-01-22 13:54:44 +01:00
297fc0d76c
gnu: r-illuminahumanmethylation450kanno-ilmn12-hg19: Update to 0.6.1.
...
* gnu/packages/bioconductor.scm (r-illuminahumanmethylation450kanno-ilmn12-hg19): Update to 0.6.1.
Change-Id: I142318c4854c75f27bcd1bfe4bfc389cbc8b3725
2024-01-22 13:54:44 +01:00
c5a934df85
gnu: r-go-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-go-db): Update to 3.18.0.
Change-Id: I90ff2421b742369847353aaf32cf8bc4651afda7
2024-01-22 13:54:44 +01:00
d9de950ac6
gnu: r-genomeinfodbdata: Update to 1.2.11.
...
* gnu/packages/bioconductor.scm (r-genomeinfodbdata): Update to 1.2.11.
Change-Id: Iacb39950f70c8affe457330df8b43260e71ab548
2024-01-22 13:54:44 +01:00
2ee9cce50f
gnu: r-bsgenome-mmusculus-ucsc-mm10: Update to 1.4.3.
...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): Update to 1.4.3.
Change-Id: Idbf573d2b4931550122119eed67879c2b13ed52f
2024-01-22 13:54:44 +01:00
6ee0d63dfc
gnu: r-reactome-db: Update to 1.86.2.
...
* gnu/packages/bioconductor.scm (r-reactome-db): Update to 1.86.2.
Change-Id: I8312c151f89ef27c5f75adbdf27c098e77f05453
2024-01-22 13:54:44 +01:00
287c5b085b
gnu: r-org-sc-sgd-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): Update to 3.18.0.
Change-Id: I1f7a497f0b36b1fe336343e215fe5c3f179b11ed
2024-01-22 13:54:44 +01:00
8ec5a25eff
gnu: r-org-bt-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-bt-eg-db): Update to 3.18.0.
Change-Id: I4385882eeb83326af88141b301f892632f6cf678
2024-01-22 13:54:44 +01:00
d2573f4e28
gnu: r-org-eck12-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-eck12-eg-db): Update to 3.18.0.
Change-Id: Ic8b25521c9a735522c69e3d696d8a514f8d6d17c
2024-01-22 13:54:44 +01:00
d264237d55
gnu: make-crust-package: Unite firmware and tools.
...
* gnu/packages/firmware.scm (make-crust-package): Perform union of
make-crust-firmware and make-crust-tools.
* gnu/packages/firmware.scm (make-crust-firmware): New procedure.
Change-Id: I687bb6d53aae9bd60ed988baf9d17e92f31faa7b
2024-01-22 11:26:57 +01:00
938f153784
gnu: Add make-crust-tools.
...
* gnu/packages/firmware.scm (make-crust-tools): New procedure.
Change-Id: Iac05ecf1796e4c10692a423c12423ea9b078d141
2024-01-22 11:26:57 +01:00
dde246ed41
gnu: make-crust-package: Use or1k-elf as target.
...
* gnu/packages/firmware.scm (make-crust-package): Use or1k-elf as the
target.
Change-Id: I6c8bf053527f1e12e35402f18cebf8e75557c788
2024-01-22 11:26:56 +01:00
fa0b2cdab3
gnu: make-crust-package: Update to 0.6.
...
* gnu/packages/firmware.scm (make-crust-package): Update to 0.6. Do not
install host tool as it is not built by default.
Change-Id: Ia79ae8208589601d32235f6d8ace9dce3f8d74f9
2024-01-22 11:26:56 +01:00
e5a00639aa
gnu: make-crust-package: Memoize.
...
* gnu/packages/firmware.scm (make-crust-package): Use mlambda.
Change-Id: I2d916b96bc650f3731a69505e086cf8f8f470809
2024-01-22 11:26:56 +01:00
ae7da5cbf0
gnu: make-crust-package: Use shorter synopsis.
...
* gnu/packages/firmware.scm (make-crust-package) <synopsis>: Make it
short.
Change-Id: I8b93b25a9a6a75aaa92ffa590d0fd46a5511fd49
2024-01-22 11:26:56 +01:00
937e64537e
gnu: Add gcc-cross-or1k-elf-toolchain.
...
* gnu/packages/cross-toolchain.scm (gcc-cross-or1k-elf-toolchain): New
variable.
Change-Id: Iaf7ed60dbbe116a5efbad8e94be9b2dee51faf15
2024-01-22 11:26:56 +01:00
82aef470ce
gnu: cross-gcc-toolchain: Use fixed name.
...
* gnu/packages/cross-base.scm (cross-gcc-toolchain) <name>: Always use
gcc-cross- prefix regardless of TARGET having a C standard library or not.
Change-Id: I5cbe89c61e5bd324a385db17c27131ea5ef75669
2024-01-22 11:26:56 +01:00
9f6aab9591
gnu: emacs-orgalist: Fix build.
...
* gnu/packages/emacs-xyz.scm (emacs-orgalist)[source]<origin>: Use correct extension.
Change-Id: Idea5aa97de9838b4a7bfabd7e7609727bd925a71
2024-01-22 09:49:45 +01:00
9b65b60b97
gnu: notmuch: Update to 0.38.2.
...
* gnu/packages/mail.scm (notmuch): Update to 0.38.2.
* gnu/packages/patches/notmuch-emacs-test-output.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Apply file deletion.
Change-Id: I60d0487f2258ed5ef8602de7a624686c5f012a4f
2024-01-22 09:32:57 +01:00
48c52ed486
gnu: emacs-ebdb: Fix build.
...
* gnu/packages/emacs-xyz.scm (emacs-ebdb)[propagated-inputs]: Add
EMACS-ORG-ROAM.
Change-Id: I77c2373dcc50ed4a832bf1d493c44eb0b96ebc7b
2024-01-22 09:14:37 +01:00
17e0b03824
gnu: cambalache: Fix buld.
...
As seen in http://ci.guix.gnu.org/build/3338535/log/raw .
* gnu/packages/gnome.scm (cambalache): Fix build.
[inputs]: Swap duplicated webkitgtk to webkitgtk-for-gtk3.
Change-Id: I9604159d3aa343e0bcb539cfade520ddd97cb489
2024-01-21 23:30:20 +00:00
9e9c1613dd
gnu: emacs-org-fc: Update to 0.4.0.
...
* gnu/packages/emacs-xyz.scm (emacs-org-fc): Update to 0.4.0.
[arguments]<#:phases>: Fix build error by adding missing (require 'eieio).
<#:test-command>: Load more tests.
[native-inputs]: Add EMACS-EL-MOCK.
Change-Id: Ibdaf38f3dd8f3018bf2b7b53cd94626b983fc953
2024-01-22 00:20:56 +01:00
a9d5628f5b
gnu: emacs-el-mock: Update to 1.25.1-1.6cfbc9d.
...
* gnu/packages/emacs-xyz.scm (emacs-el-mock): Update to 1.25.1-1.6cfbc9d.
Change-Id: I2e13b8854f9089f68f1ec9eb0fa671e760ea9ec3
2024-01-22 00:20:56 +01:00
b63b53b64e
gnu: emacs-plz: Update to 0.7.2.
...
* gnu/packages/emacs-xyz.scm (emacs-plz): Update to 0.7.2.
Change-Id: I24ef66998d9a8b83169c185974f2ce2b3697dd4c
2024-01-22 00:20:55 +01:00
c3d8f39b5b
gnu: emacs-pg: Update to 0.27.
...
* gnu/packages/emacs-xyz.scm (emacs-pg): Update to 0.27.
Change-Id: I10c65f30e790d461c925352b993aa4dc3d6696dd
2024-01-22 00:20:55 +01:00
1c17b444c6
gnu: emacs-org-re-reveal: Update to 3.25.1.
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* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): Update to 3.25.1.
Change-Id: I79a195184b5d2ad842e4738862086c0b595b967c
2024-01-22 00:20:55 +01:00
396d84071f
gnu: emacs-org-ql: Update to 0.8.4.
...
* gnu/packages/emacs-xyz.scm (emacs-org-ql): Update to 0.8.4.
Change-Id: Idb2e25155a62cbf699367a749194dce1852339ec
2024-01-22 00:20:55 +01:00
3485c7bfef
gnu: emacs-julia-snail: Update to 1.3.1.
...
* gnu/packages/emacs-xyz.scm (emacs-julia-snail): Update to 1.3.1.
Change-Id: I4cd574e2864ba23d0edd1331932ecef974466be6
2024-01-22 00:20:55 +01:00
c6daf5d617
gnu: emacs-helm: Update to 3.9.7.
...
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.9.7.
Change-Id: I08be44a04cb5e829517cc6d406efa546b1c5c763
2024-01-22 00:20:54 +01:00
f76fb72bec
gnu: emacs-hackernews: Update to 0.7.0.
...
* gnu/packages/emacs-xyz.scm (emacs-hackernews): Update to 0.7.0.
Change-Id: Iba7bc8f02bf747fd2ac80a96bedffd47fe572109
2024-01-22 00:20:54 +01:00
b819853ade
gnu: emacs-gptel: Update to 0.6.0.
...
* gnu/packages/emacs-xyz.scm (emacs-gptel): Update to 0.6.0.
[propagated-inputs]: Add EMACS-COMPAT.
Change-Id: Ideaef04c6a4e76dc4d86fc490b320e01ce205d02
2024-01-22 00:20:54 +01:00
510a4ebe96
gnu: emacs-elisp-demos: Improve package style.
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* gnu/packages/emacs-xyz.scm (emacs-elisp-demos)[arguments]: Use
G-expressions.
<#:include>: Use default include.
Change-Id: I44960fa1d7ddec2d15e6927aa76eafb32a03e627
2024-01-22 00:20:54 +01:00
c522be3ef3
gnu: emacs-elisp-demos: Update to 2024.01.16.
...
* gnu/packages/emacs-xyz.scm (emacs-elisp-demos): Update to 2024.01.16.
Change-Id: Ia23a78b139d3182fd2452658de2f0fbafd052fff
2024-01-22 00:20:53 +01:00
4a58794095
gnu: emacs-edit-indirect: Update to 0.1.11.
...
* gnu/packages/emacs-xyz.scm (emacs-edit-indirect): Update to 0.1.11.
Change-Id: I4400a25c749aef604e6ec0afd79df965cf62a831
2024-01-22 00:20:53 +01:00
9a4ca3332f
gnu: emacs-dtrt-indent: Update to 1.16.
...
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): Update to 1.16.
Change-Id: I55b98386433817c8423d8a7d4c868e3e27a16f46
2024-01-22 00:20:53 +01:00
303765a0ec
gnu: emacs-clj-refactor: Update to 3.11.3.
...
* gnu/packages/emacs-xyz.scm (emacs-clj-refactor): Update to 3.11.3.
Change-Id: Ifd6131fa4c1360785c2a8e061353f269fcb1c23d
2024-01-22 00:20:53 +01:00
15bdc7215b
gnu: emacs-cider: Update to 1.13.0.
...
* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 1.13.0.
Change-Id: I0186168caf932111a490f993cc085b455d35765a
2024-01-22 00:20:52 +01:00
85637f78c4
gnu: emacs-boon: Update to 1.3.
...
* gnu/packages/emacs-xyz.scm (emacs-boon): Update to 1.3.
Change-Id: I0c62dc2539d460ed6ca387d4c00e3640d65b72c0
2024-01-22 00:20:52 +01:00
8ec813f7b2
gnu: emacs-log4e: Update to 0.4.0.
...
* gnu/packages/emacs-xyz.scm (emacs-log4e): Update to 0.4.0.
Change-Id: I96d0496155e15cd2dc58c5332f8283541070e5f0
2024-01-22 00:20:52 +01:00
a0b297fd9a
gnu: emacs-adwaita-dark-theme: Update to 1.3.0.
...
* gnu/packages/emacs-xyz.scm (emacs-adwaita-dark-theme): Update to 1.3.0.
Change-Id: I6934d7302786ba2b64f3395edc6a77b2f2883485
2024-01-22 00:20:52 +01:00
bf7ef80167
gnu: emacs-frecency: Update to 1.0.
...
* gnu/packages/emacs-xyz.scm (emacs-frecency): Update to 1.0.
Change-Id: Id3491d73081f768adb7eaa542c48fed6791372f6
2024-01-22 00:20:52 +01:00
ecae012c80
gnu: emacs-org-modern: Update to 1.1.
...
* gnu/packages/emacs-xyz.scm (emacs-org-modern): Update to 1.1.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Change-Id: Id009309ba4c5ad1d7db860e5748318cfe5a587bb
2024-01-22 00:20:51 +01:00
ddf2c7a1d2
gnu: emacs-yeetube: Update to 2.0.9.
...
* gnu/packages/emacs-xyz.scm (emacs-yeetube): Update to 2.0.9.
[arguments]<#:phases>: Skip check looking for mpv and yt-dlp executables.
[propagated-inputs]: Add EMACS-COMPAT.
Change-Id: I826a2e9f9ab510148c4e29f770394ea7b953fa07
2024-01-22 00:20:51 +01:00
3cee87f947
gnu: emacs-emms-print-metadata: Update to 18.
...
* gnu/packages/emacs-xyz.scm (emacs-emms-print-metadata): Update to 18.
Change-Id: I65dd48807f9d948fe70ab4516f7e10c32018fcd5
2024-01-22 00:20:51 +01:00
c9d1926a72
gnu: emacs-persist: Update to 0.6.
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* gnu/packages/emacs-xyz.scm (emacs-persist): Update to 0.6.
Change-Id: I05800e343e5225e6cc556ba69f87d5716707b7a0
2024-01-22 00:20:51 +01:00
1f0d72371c
gnu: emacs-ebdb: Update to 0.8.22.
...
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.22.
Change-Id: I658b52bc67c3a57ff873af9a9d92d7309b2dc7f2
2024-01-22 00:20:50 +01:00
666cdecebd
gnu: emacs-kind-icon: Update to 0.2.2.
...
* gnu/packages/emacs-xyz.scm (emacs-kind-icon): Update to 0.2.2.
Change-Id: Ic65954c9c4c83bd7567dbc92bf0d7df4d1718abe
2024-01-22 00:20:50 +01:00
c262ef84c0
gnu: emacs-csv-mode: Update to 1.23.
...
* gnu/packages/emacs-xyz.scm (emacs-csv-mode): Update to 1.23.
Change-Id: I72d0c1d7e39ae7d44c52eac2b0d9bb431a3c3291
2024-01-22 00:20:50 +01:00
4c106455ca
gnu: emacs-orgalist: Update to 1.14.
...
* gnu/packages/emacs-xyz.scm (emacs-orgalist): Update to 1.14.
Change-Id: Ic1914d895f3f2ff2206a2d5c5e471c9107564713
2024-01-22 00:20:50 +01:00
4a38b799eb
gnu: emacs-debbugs: Update to 0.38.
...
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.38.
Change-Id: I8bbb79e0cd3f832ae26a73f2606ada50ca773098
2024-01-22 00:20:50 +01:00
8aa6b3a617
gnu: emacs-auctex: Update to 13.3.0.
...
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.3.0.
Change-Id: I174022a198a5ce12e7cb8a9fe0e290ae7b8031db
2024-01-22 00:20:49 +01:00
741581b221
gnu: emacs-helm-make: Update to 0.2.0-0.ebd71e8.
...
* gnu/packages/emacs-xyz.scm (emacs-helm-make): Update to 0.2.0-0.ebd71e8.
Change-Id: I5bc5888eb7ff69af769921b0751e625c43a666b6
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-01-22 00:20:49 +01:00
119d1e5939
gnu: Add emacs-org-glossary.
...
* gnu/packages/emacs-xyz.scm (emacs-org-glossary): New variable.
Change-Id: Id087b723709ac5afb7dda0da15eac610c8ab218e
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-01-22 00:20:49 +01:00
79fafbe33c
gnu: Add emacs-ox-tufte.
...
* gnu/packages/emacs-xyz.scm (emacs-ox-tufte): New variable.
Change-Id: Iaaff4b08eddb8f38b39f003e70821ace6c937c86
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-01-22 00:20:49 +01:00
37cbd7a27c
gnu: Add emacs-golden-ratio.
...
* gnu/packages/emacs-xyz.scm (emacs-golden-ratio): New variable.
Change-Id: I44de02989b8dadd4a395374fe078d4255a210028
2024-01-22 00:20:49 +01:00
a6ba98f1da
gnu: emacs-org: Update to 9.6.17.
...
* gnu/packages/emacs-xyz.scm: Update to 9.6.17.
Change-Id: I8f3a76631b588151cceca755730dfd8b7daf248a
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-01-22 00:20:48 +01:00
661d29894c
gnu: Add emacs-flexoki-themes.
...
* gnu/packages/emacs-xyz.scm (emacs-flexoki-themes): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
Change-Id: Ic69965014234ef7c6ef2276bd7f100b466a8b327
2024-01-22 00:20:48 +01:00
e775f704c8
gnu: Add r-bodymaprat.
...
* gnu/packages/bioconductor.scm (r-bodymaprat): New variable.
Change-Id: I6843b957d5722f4c5460796ba41effee5717ae45
2024-01-21 23:54:23 +01:00
d3c3922a8f
gnu: linux-libre 6.1: Update to 6.1.74.
...
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.74.
(linux-libre-6.1-pristine-source): Update hash.
Change-Id: Ic6186373d0f4af011e22acf4a5bd0753af5b0834
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-01-21 15:22:26 -05:00
d04b26ed47
gnu: linux-libre 6.6: Update to 6.6.13.
...
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.13.
(linux-libre-6.6-pristine-source): Update hash.
Change-Id: I489472a5cac6f1e27868f9e3064cc265a3fb075a
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-01-21 15:22:26 -05:00
f53f90ebb8
gnu: linux-libre 6.7: Update to 6.7.1.
...
* gnu/packages/linux.scm (linux-libre-6.7-version): Update to 6.7.1.
(linux-libre-6.7-pristine-source): Update hash.
Change-Id: I466a1c0ff4dea0efc9c48fcc670a1adebe6e3c00
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-01-21 15:22:23 -05:00
b9e74d092d
gnu: python-scikit-fem: Update to 9.0.1.
...
* gnu/packages/python-science.scm (python-scikit-fem): Update to 9.0.1.
[arguments]<#:test-flags>: Drop it to activate all tests.
[native-inputs]: Add python-autograd, python-pyamg, and python-shapely.
Change-Id: Ic4706196026bd5756b4db8230b15efacdca7d463
2024-01-21 17:40:18 +00:00
5f93aa182a
gnu: Add python-pyamg.
...
* gnu/packages/python-science.scm (python-pyamg): New variable.
Change-Id: Ibf39fecd14d4e6fd72078b217737e5e5cbbf2321
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-21 17:18:29 +00:00
121de47dec
gnu: converseen: Update to 0.12.0.2.
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* gnu/packages/image.scm (converseen): Update to 0.12.0.2.
[arguments]<#:configure-flags>: Use Qt6.
[native-inputs, inputs]: Use Qt6.
* gnu/packages/patches/converseen-hide-non-free-pointers.patch: Update patch.
Change-Id: I6b6dc200b1b98115400854b2ff77cc805df45078
2024-01-21 15:48:36 +01:00
f649f82053
gnu: Add moonlight-qt.
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* gnu/packages/games.scm (moonlight-qt): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2024-01-21 16:01:07 +03:00
5034e541e6
gnu: Add moonlight-common.
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* gnu/packages/games.scm (moonlight-common): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
Change-Id: Ibf379d85fac0bdc000fdf56a3c850bb8a1067330
2024-01-21 16:01:04 +03:00
14db6616e8
gnu: Add h264bitstream.
...
* gnu/packages/video.scm (h264bitstream): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2024-01-21 16:00:51 +03:00
cbb4d8cb27
gnu: Add enet-moonlight.
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* gnu/packages/networking.scm (enet-moonlight): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2024-01-21 16:00:48 +03:00
646c1c093f
gnu: Add qmdnsengine.
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* gnu/packages/qt.scm (qmdnsengine): New variable.
Change-Id: I6838ed2574424c03ecbb21d9265d6a33c3cb4c91
2024-01-21 16:00:16 +03:00
1d00a9edff
gnu: Add r-protgear.
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* gnu/packages/bioconductor.scm (r-protgear): New variable.
Change-Id: Ic6d5cae65d4f76df4488ee2462071ba68b50c184
2024-01-21 11:08:13 +01:00
0afe456973
Revert "gnu: emacs-minimal: Update to 29.2."
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This reverts commit b9bc400d85http://logs.guix.gnu.org/guix/2024-01-21.log#095235 >
Reported-by: Efraim Flashner <efraim@flashner.co.il>
2024-01-21 10:09:55 +01:00
ed3aa00249
gnu: gnome-shell-extension-paperwm: Use new package style.
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* gnu/packages/gnome-xyz.scm (gnome-shell-extension-paperwm)[arguments]:
Convert to list of G-Expressions.
[native-inputs]: Drop labels.
Co-authored-by: Justin Veilleux <terramorpha@cock.li>
Co-authored-by: Vivien Kraus <vivien@planete-kraus.eu>
2024-01-21 09:48:21 +01:00
5fa60c3e81
gnu: gnome-shell-extension-paperwm: Update to 44.17.0.
...
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-paperwm): Update to 44.17.0.
Change-Id: I3d9923ccfdb35b9952c24d8dd3d064c3cba7b8c2
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-01-21 09:32:29 +01:00
ccbbe3bd57
gnu: vcmi: Update to 1.4.2.
...
* gnu/packages/games.scm (vcmi): Update to 1.4.2.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-01-21 09:32:29 +01:00
b9bc400d85
gnu: emacs-minimal: Update to 29.2.
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* gnu/packages/emacs.scm (emacs-minimal): Update to 29.2.
2024-01-21 09:32:29 +01:00
c7f937cfdd
gnu: emacs-minimal: Set upstream-name to “emacs”.
...
* gnu/packages/emacs.scm (emacs-minimal)[properties]: Add ‘upstream-name’.
2024-01-21 09:32:28 +01:00
0facea431a
gnu: Add r-netgsa.
...
* gnu/packages/bioconductor.scm (r-netgsa): New variable.
Change-Id: I79b842854db80bbacdb8ff4c9fccfabdfc04d779
2024-01-21 08:33:56 +01:00
815e378dee
gnu: Add r-glassofast.
...
* gnu/packages/cran.scm (r-glassofast): New variable.
Change-Id: I6ec7a1f8d4391d7d93f23789f448476b866e4687
2024-01-21 08:33:51 +01:00
6648e34342
gnu: Add r-rcy3.
...
* gnu/packages/bioconductor.scm (r-rcy3): New variable.
Change-Id: Ia295e8a174f65c8378ae83bdc1dde2877a48ff45
2024-01-21 08:30:40 +01:00
0ef8afe1e1
gnu: torbrowser: Add support for language localisation.
...
* gnu/packages/gnuzilla.scm (all-mozilla-locales): Export it.
* gnu/packages/tor.scm (%torbrowser-locales, translation-base-browser,
translation-tor-browser): New variables.
(torbrowser)[arguments]: In ‘setenv’ phase, set MOZ_CHROME_MULTILOCALE. Add
‘copy-firefox-locales’, ‘copy-basebrowser-locales’, ‘copy-torbrowser-locales’
and ‘build-locales’ phases.
Change-Id: Ia5b28fa5d885f24140893dc270e57e83b0250c67
2024-01-21 01:17:51 +01:00
8ca35ca44f
gnu: r-cytolib: Update to 2.14.1.
...
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.14.1.
[source]: Do not unbundle included boost.
[arguments]: Remove.
[inputs]: Remove boost.
Change-Id: Ibe26b9df3f73e67fb9f53676a2c27a5aed714895
2024-01-21 00:17:45 +01:00
e1d3be4113
gnu: python-pandera: Fix build.
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* gnu/packages/python-science.scm (python-pandera): Fix build.
[source]: Delete tests/modin directory.
[native-inputs]: Remove python-modin.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-20 22:03:03 +00:00
7c540ed106
gnu: python-pandas-stubs: Update to 1.5.3.230321.
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* gnu/packages/python-science.scm (python-pandas-stubs): Update to
1.5.3.230321.
[arguments]<#:test-flags>: Ignore tests that require a version of
python-pyarrow with ORC integration.
[native-inputs]: Add python-odfpy.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-20 22:02:49 +00:00
c79ffe25e9
gnu: xorg-server-xwayland: Update to 23.2.4 [security fixes].
...
Fixes CVE-2023-6816, CVE-2024-0229, CVE-2024-21885, CVE-2024-21886,
CVE-2024-0409, and CVE-2024-0408. See the X.Org security advisory
<https://lists.x.org/archives/xorg/2024-January/061525.html > for more
information.
* gnu/packages/xorg.scm (xorg-server-xwayland): Update to 23.2.4.
Change-Id: Ie6343d34652ba0caf00940775b5b227dd9bc05bc
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
2024-01-20 16:52:09 -05:00
ed6ff0ec7b
gnu: xorg-server: Update to 21.1.11 [security fixes].
...
Fixes CVE-2023-6816, CVE-2024-0229, CVE-2024-21885, CVE-2024-21886,
CVE-2024-0409, and CVE-2024-0408. See the X.Org security advisory
<https://lists.x.org/archives/xorg/2024-January/061525.html > for more
information.
Copyright line updated as followup to commits
3080abba40158502e40d
2024-01-20 16:52:08 -05:00
856b4a603a
gnu: gnutls: Update to 3.8.3 [security-fixes].
...
Fixes CVE-2024-0553 and CVE-2024-0567.
gnu/packages/tls.scm (gnutls-3.8.2): Rename to ...
(gnutls/fixed): ... this. Update to 3.8.3.
(gnutls): Rename replacement to gnutls/fixed.
Change-Id: Ic44b3b0481ffd51cdc42a2d71a598f001b43c6f7
Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
Co-authored-by: John Kehayias <john.kehayias@protonmail.com>
2024-01-20 16:52:05 -05:00
782d69fb7f
gnu: Add python-manimpango.
...
* gnu/packages/python-xyz.scm (python-manimpango): New variable.
Co-authored-by: Troy Figiel <troy@troyfigiel.com>
Change-Id: I80effb2412e7c35ddf69c0d3ff6e2f052f282840
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-20 21:35:29 +00:00
9072f27f5d
gnu: r-org-hs-eg-db: Update to 3.18.0.
...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): Update to 3.18.0.
Change-Id: Iaba83a413858a95e81b6488a2f8cde648f0bdeed
2024-01-20 19:52:40 +01:00
d441454ba8
gnu: Add r-methylclockdata.
...
* gnu/packages/bioconductor.scm (r-methylclockdata): New variable.
Change-Id: Id76373a9aec8276dcfd1ec3428d2ce9c81cc51d2
2024-01-20 19:52:24 +01:00
2b3a21c55f
gnu: Add r-experimenthubdata.
...
* gnu/packages/bioconductor.scm (r-experimenthubdata): New variable.
Change-Id: I5faf26f483898b162bc1f863a4aceb6f46c52c18
2024-01-20 19:52:05 +01:00
c4838027b4
gnu: Add r-jaspar2016.
...
* gnu/packages/bioconductor.scm (r-jaspar2016): New variable.
Change-Id: Ib2970791207b426c39bd0226e01107a35fec0bb2
2024-01-20 19:50:13 +01:00
6f93502ced
gnu: Add r-genomicstate.
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* gnu/packages/bioconductor.scm (r-genomicstate): New variable.
Change-Id: I1b86c8e849af7b69b5fa9ea2a0e43b4e3e1850b2
2024-01-20 19:45:26 +01:00
4e706e6b18
gnu: Add r-shinymeta.
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* gnu/packages/cran.scm (r-shinymeta): New variable.
Change-Id: I35e1c032283cdc010e4551c0d33f9d4202d9deee
2024-01-20 19:45:26 +01:00
c410d4e268
gnu: Add r-ensdb-hsapiens-v79.
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* gnu/packages/bioconductor.scm (r-ensdb-hsapiens-v79): New variable.
Change-Id: I773615df66194ddb195f013f7000d175ac07d095
2024-01-20 19:45:26 +01:00
9c367ee196
gnu: Add rust-rustc-demangle-capi-0.1.
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* gnu/packages/crates-io.scm (rust-rustc-demangle-capi-0.1): New variable.
Change-Id: I98afb19ed4bdbcb9107a1ab30af49b055802b8b0
Reviewed-by: Efraim Flashner <efraim@flashner.co.il>
Change-Id: Ifeaefa5a377600320c3fd2a637aefaf29707e3b7
2024-01-19 22:57:27 -05:00
b509dedf83
gnu: guile-hall: Update to 0.4.1-1.7558ba9.
...
* gnu/packages/guile-xyz.scm (guile-hall): Update to 0.4.1-1.7558ba9.
[arguments] <modules>: Remove (ice-9 match) and (ice-9 ftw) modules.
Add (guix build guile-build-system).
<phases>: Use gexps. Streamline hall-wrap-binaries phase.
[native-inputs]: Add guile-3.0 and gettext-minimal.
[propagated-inputs]: Delete field, moving guile-config to...
[inputs]: ... here. Add bash-minimal and guile-lib.
Change-Id: Idef796dc3ba9ca3fa4df8114efe91af7c5cf7be0
2024-01-19 22:57:15 -05:00
c66a1a0f0f
gnu: reuse: Update to 3.0.1.
...
* gnu/packages/license.scm (reuse): Update to 3.0.1.
[arguments]: New field.
Change-Id: Ibbc5ae8cfa0e0e62b6c64bd90387022e88f9c933
2024-01-19 22:50:24 -05:00
dae418afd7
gnu: symengine: Update to 0.11.2.
...
* gnu/packages/algebra.scm (symengine): Update to 0.11.2.
Change-Id: I34c24dd8591e306a7740f0a3d51077aceec67fab
2024-01-19 22:01:31 -03:00
a185dd97e4
gnu: python-metpy: Update to 1.6.1.
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* gnu/packages/geo.scm (python-metpy): Update to 1.6.1.
Change-Id: Id8d8d6db3e31307242e56c494b6dee7c2ffab8f1
2024-01-19 22:01:31 -03:00
a6b249bd67
gnu: python-deepxde: Update to 1.10.1.
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* gnu/packages/machine-learning.scm (python-deepxde): Update to 1.10.1.
Change-Id: If3515735d4adee8a2f1e9460d6ccb72c6ce26321
2024-01-19 22:01:31 -03:00
826b4331d3
gnu: python-mapie: Update to 0.8.2.
...
* gnu/packages/statistics.scm (python-mapie): Update to 0.8.2.
Change-Id: I82098caa8ed5d3bf68eec9f374f600d203d6b178
2024-01-19 22:01:31 -03:00
b482a6c768
gnu: libngspice: Update to 42.
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* gnu/packages/engineering.scm (libngspice, ngspice): Update to 42.
Change-Id: Ib7b72724f8f46ce376bd6517cb2652c870edcb0d
2024-01-19 22:01:31 -03:00
9c67673d7b
gnu: darktable: Update to 4.6.0.
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* gnu/packages/photo.scm (darktable): Update to 4.6.0.
Change-Id: Ic64b02e8d191ba91fde1b95b9bcb4321a471dcba
2024-01-19 22:01:31 -03:00
946cd84d57
gnu: darktable: Enable more optional features.
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* gnu/packages/photo.scm (darktable)[inputs]: Add libjxl, portmidi.
Change-Id: I7747dfc2e88379a13182590f87514951bdd70e0c
2024-01-19 22:01:30 -03:00
e7d14578ad
gnu: darktable: Build with GCC.
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* gnu/packages/photo.scm (darktable)[arguments][#:phases]: Delete the
'prepare-build-environment phase.
[native-inputs]: Remove clang. Add gcc-13.
Change-Id: Ia0dc1c6a717ccd00cd31d378aa51ce63fbf1806a
2024-01-19 22:01:30 -03:00
5073187524
gnu: gmic: Update to 3.3.3.
...
gmic was integrated into Krita 5+.
* gnu/packages/image-processing.scm (gmic, gmic-qt): Update to 3.3.3.
(gmic-qt-krita): Delete variable.
Change-Id: I44e33b570bcf3e1df3eba5eb9ede1f333f8a177a
2024-01-19 22:01:30 -03:00
53096bb5a0
gnu: labplot: Update to 2.10.1.
...
* gnu/packages/kde.scm (labplot): Update to 2.10.1.
[source]<origin>: Update URI.
Change-Id: I03d24410304fb14daa20f7a75f6947caed63ab84
2024-01-19 22:01:22 -03:00
9f918e9c48
gnu: python-symengine: Update to 0.11.0.
...
* gnu/packages/python-xyz.scm (python-symengine): Update to 0.11.0.
[native-inputs]: Replace python-cython with python-cython-3.
Change-Id: Ieab464491e3df6e2bdb5b552cbf48ebf67ff81e4
2024-01-19 21:56:37 -03:00
eb1d80ac77
gnu: Add r-trnadbimport.
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* gnu/packages/bioconductor.scm (r-trnadbimport): New variable.
Change-Id: I5a232b50c08ef999f691566ccf5c0fbaf0eb21ea
2024-01-19 23:55:43 +01:00
74ce9d7e3b
gnu: Add r-trna.
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* gnu/packages/bioconductor.scm (r-trna): New variable.
Change-Id: Ifce902910fa75ddc471d8a25cc974307c19fd1d0
2024-01-19 23:55:43 +01:00
1d56a24509
gnu: Add r-modstrings.
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* gnu/packages/bioconductor.scm (r-modstrings): New variable.
Change-Id: Ia61816213a7d128ab50a9ae2b2c8879e6ac00499
2024-01-19 23:55:43 +01:00
5c10649a50
gnu: Add r-structstrings.
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* gnu/packages/bioconductor.scm (r-structstrings): New variable.
Change-Id: I9759520a03ee8178432591c48bf56fb25a379f27
2024-01-19 23:55:43 +01:00
d084e9d036
gnu: Add python-mediapy.
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* gnu/packages/python-xyz.scm (python-mediapy): New variable.
Change-Id: I2e55c018670053c662ae2d896feefab3b505b139
2024-01-19 23:55:43 +01:00
d8c718d44c
gnu: Add r-flames.
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* gnu/packages/bioconductor.scm (r-flames): New variable.
Change-Id: I551a8f9d7de16e2281898b9541572dd244aadc36
2024-01-19 23:55:43 +01:00
f7c0ccb186
gnu: kubo: Update to 0.16.0.
...
* gnu/packages/ipfs.scm (kubo): Update to 0.16.0.
[arguments]: Use go-1.18.
[home-page]: Set to "https://ipfs.tech ".
Change-Id: I06239354b0c9c23294d5aeac6d01f67636d5d3a5
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-01-19 21:51:35 +00:00
c0f423bf1a
gnu: emacs-evil-quickscope: Skip failing test.
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* gnu/packages/emacs-xyz.scm (emacs-evil-quickscope)
[arguments]: Use gexps. Add disable-failing-tests phase.
Change-Id: If372531778eab6e3fc164a2f63b98d6775193114
2024-01-19 15:05:53 -05:00
d6170e03e3
gnu: emacs-shx: Fix test failure.
...
* gnu/packages/patches/emacs-shx-byte-compilation-test.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs-xyz.scm (emacs-shx): Apply it.
Change-Id: I6d8edd3b50f99f1c4cd495216caf9648dfee4ea3
2024-01-19 15:05:53 -05:00
33f12b7dcd
gnu/local.mk: Sort Emacs patches and fix 2044 year in copyright notice.
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* gnu/local.mk: Correct 2044 copyright year.
(dist_patch_DATA): Sort emacs patches.
Change-Id: Ib9669bb1d7fb2556d6d809d62624981fa66d27f3
2024-01-19 15:05:53 -05:00
ec24673bf9
gnu: emacs-org-journal: Disable failing tests.
...
* gnu/packages/emacs-xyz.scm (emacs-org-journal)
[arguments]: Add disable-failing-tests phase.
Change-Id: I466cb46613a7048ccbda66cd7855001a04871891
2024-01-19 15:05:52 -05:00
72f31a9be6
gnu: emacs-ess: Disable flaky "command-without-trailing-newline-test" test.
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* gnu/packages/statistics.scm [arguments]: Add new disable-etests syntax in
'skip-failing-tests phase, and use it to disable the
'command-without-trailing-newline-test' test.
Change-Id: I99f52685691d86dc633fe6061f9ef3332159eb4e
2024-01-19 15:05:52 -05:00
4987618368
gnu: wfmash: Update to 0.12.5.
...
* gnu/packages/bioinformatics.scm (wfmash): Update to 0.12.5.
(source): Use git-fetch. Update git repository URL.
(arguments): In check phase, symlink to "../source/data" and change wfmash
invocation arguments.
(home-page): Update URL.
Change-Id: I78f228f06a6a12e6904a58a12fd4201743e84d72
2024-01-19 18:04:39 +00:00
15efd5a7f4
gnu: python-graph-tool: Update to 2.59.
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* gnu/packages/graph.scm (python-graph-tool): Update to 2.59.
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Change-Id: I08ecb5fe76183fa980fedf2408fc1df93ebbc63d
2024-01-19 17:20:04 +00:00
4d91ddf5bc
gnu: guix-build-coordinator: Update to 0-95.dc04b74.
...
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-95.dc04b74.
Change-Id: I89d968e72188428d40906a7d55533dfd25c7ec25
2024-01-19 16:45:38 +00:00
6fb4cb7ca3
gnu: bffe: Update to 0-3.1c12da4.
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* gnu/packages/package-management.scm (bffe): Update to 0-3.1c12da4.
Change-Id: I90a4231961aed434c2b4ffa07189b85e108b5c46
2024-01-19 16:45:38 +00:00
65e7828a95
gnu: nsq: Fix build on i686-linux.
...
As seen in https://ci.guix.gnu.org/build/3329277/details
* gnu/packages/high-availability.scm (nsq)[arguments]<#:phases>{check}:
Skip '-race' option during tests on i686-linux.
Change-Id: I952d7187443835d5fbcb74f0ae09b923bd6bdb29
2024-01-19 13:57:54 +00:00
0eadd48648
gnu: Add emacs-vhdl-mode.
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* gnu/packages/emacs-xyz.scm (emacs-vhdl-mode): New variable.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Change-Id: I7e261fc25ae011c20f22e1078ae40bacff3a6947
2024-01-18 22:42:42 -05:00
05be458f02
gnu: Add emacs-pde.
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* gnu/packages/emacs-xyz.scm (emacs-pde): New variable.
Change-Id: Icab5d8acf9d441bb4a832a82e75432d64cc77ba7
2024-01-18 22:41:02 -05:00
33783e3695
gnu: perl-b-keywords: Update to 1.26.
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* gnu/packages/perl.scm (perl-b-keywords): Update to 1.26.
Change-Id: I3fdb9acf9f257ff9583179e29b2e6a26104b7e0d
2024-01-18 22:10:58 -05:00
Ricardo Wurmus
Andreas Enge
Andre A. Gomes
Sharlatan Hellseher
Antero Mejr
Mathieu Othacehe
Mark H Weaver
Efraim Flashner
Artyom V. Poptsov
Troy Figiel
Gabriel Wicki
Wilko Meyer
Oleg Pykhalov
David Thompson
muradm
Jean-Pierre De Jesus DIAZ
Nicolas Goaziou
Dakota Logan
Cayetano Santos
Nicolas Graves
Suhail
Peter Polidoro
Andrew Jose
Felix Gruber
Petr Hodina
Liliana Marie Prikler
terramorpha
Vagrant Cascadian
Clément Lassieur
Kaelyn Takata
Jack Hill
Wamm K. D
Maxim Cournoyer
Vinicius Monego
Arun Isaac
Greg Hogan
Christopher Baines