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88939 Commits (26e26bc8191604f0125ccbdc231498545f93dc5c)

Author SHA1 Message Date
Josselin Poiret adce91a3ec
gnu: system: Add LUKS2 support for the root file system. 
* gnu/bootloader/grub.scm (grub-configuration-file): Add 'insmod
luks2'.
* gnu/system/mapped-devices.scm (open-luks-device): Create
'/run/cryptsetup/' directory.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:51:37 +01:00
Ludovic Courtès 9f371f23eb
inferior: 'cached-channel-instance' does not cache unauthenticated instances. 
The comment saying that caching is fine even when AUTHENTICATE? is false
was true in commit 838ac881ec, but it
became incorrect in 7cfd789150, which
no longer calls 'latest-channel-instances' on cache hits.

* guix/inferior.scm (cached-channel-instance): Do not create CACHED when
AUTHENTICATE? is false.
 2021-12-01 17:51:33 +01:00
Guillaume Le Vaillant 1a0696e0a6
gnu: sdrangel: Add missing input. 
QtQuick is required by some runtime features.

* gnu/packages/radio.scm (sdrangel)[inputs]: Add qtquickcontrols2.
 2021-12-01 17:30:45 +01:00
jgart via Guix-patches via e7ead42383
gnu: python-language-server: Add deprecated alias. 
* gnu/packages/python-xyz.scm (python-language-server): New variable.

Add deprecated alias for package removed in the parent commit.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:13:41 +01:00
jgart via Guix-patches via 7907ddbc3a
gnu: Add python-lsp-server. 
* gnu/packages/python-xyz.scm (python-language-server): Delete variable.
* gnu/packages/python-xyz.scm (python-lsp-server): New variable.

Removes deprecated python-language-server package and adds maintained
fork.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:13:27 +01:00
jgart via Guix-patches via 0c3acb247a
gnu: python-lsp-jsonrpc: Add deprecated alias. 
* gnu/packages/python-xyz.scm (python-jsonrpc-server): New variable.

Add deprecated alias for package removed in the parent commit.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:13:10 +01:00
jgart via Guix-patches via 869c7d6703
gnu: Add python-lsp-jsonrpc. 
* gnu/packages/python-xyz.scm (python-jsonrpc-server): Delete variable.
* gnu/packages/python-xyz.scm (python-lsp-jsonrpc): New variable.

Removes deprecated python-jsonrpc-server package and adds maintained
fork.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:12:58 +01:00
jgart 46e030764d
gnu: python-jedi: Update to 0.18.1. 
* gnu/packages/python-xyz.scm (python-jedi): Update to 0.18.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:12:31 +01:00
jgart via Guix-patches via 6b29c3c735
gnu: python2-jedi: Remove package. 
* gnu/packages/python-xyz.scm (python2-jedi): Delete variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:10:34 +01:00
jgart via Guix-patches via c56e9033f5
gnu: python-parso: Update to 0.8.2. 
* gnu/packages/python-xyz.scm (python-parso): Update to 0.8.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:10:18 +01:00
raingloom d9956e9383
gnu: yggdrasil: Update to 0.4.1. 
* gnu/packages/networking.scm (yggdrasil): Update to 0.4.1.
* gnu/packages/patches/yggdrasil-extra-config.patch: Update for new version.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom f3b2af2147
gnu: yggdrasil: Update to 0.4.0. 
* gnu/packages/patches/yggdrasil-extra-config.patch: Update patch.
* gnu/packages/networking.scm (yggdrasil): Update to 0.4.0.
[arguments]: Also install genkeys.
[propagated-inputs]: Remove go-github-com-cheggaaa-pb; add go-golang-org-x-sys,
go-github-com-mattn-go-runewidth, go-github-com-mattn-go-isatty,
go-github-com-fatih-color, go-github-com-cheggaaa-pb-v3,
go-github-com-vividcortex-ewma, and go-github-com-arceliar-ironwood.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom dee3e337b6
gnu: Add go-github-com-arceliar-ironwood. 
* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom 7e4b418733
gnu: Rename go-github-com-cheggaaa-pb to go-github-com-cheggaaa-pb-v3. 
* gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Rename this variable...
(go-github-com-cheggaaa-pb-v3): ...to this variable.
(go-github-com-cheggaaa-pb): New variable for deprecated package.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom b7e774a828
gnu: go-github-com-cheggaaa-pb: Update to 3.0.8. 
* gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Update to 3.0.8.
[arguments]: Disable tests; update import path.
[native-inputs]: Move go-github-com-mattn-go-isatty from here...
[propagated-inputs]: ...to here; add go-github-com-vividcortex-ewma and
go-github-com-rivo-uniseg.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom 660062a65b
gnu: Add go-github-com-mattn-go-runewidth. 
* gnu/packages/golang.scm (go-github-com-mattn-go-runewidth): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom f3861469b6
gnu: Add go-github-com-rivo-uniseg. 
* gnu/packages/golang.scm (go-github-com-rivo-uniseg): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom b3a9d079b8
gnu: Add go-github-com-vividcortex-ewma. 
* gnu/packages/golang.scm (go-github-com-vividcortex-ewma): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
ZmnSCPxj via Guix-patches via 5ca0042116
gnu: Add python-mrkd. 
* gnu/packages/python-xyz.scm (python-mrkd): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 16:40:49 +01:00
cage 0a9edd23ca
gnu: telescope: Update to 0.6.1. 
* gnu/packages/web-browsers.scm (telescope): Update to 0.6.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 16:36:39 +01:00
cage 8e7e839c98
gnu: cl-unix-opts: Update to 0.1.7-1.0e61f34. 
* gnu/packages/lisp-xyz.scm (sbcl-unix-opts): Update to 0.1.7-1.0e61f34.
  [source]: Fetch using commit instead of old tag.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 13:26:29 +01:00
cage 0da9ae01a8
gnu: cl-croatoan: Update to 0.0.1-4.cf87513. 
* gnu/packages/lisp-xyz.scm (sbcl-croatoan): Update to 0.0.1-4.cf87513.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 13:16:01 +01:00
jgart dc438820c3
gnu: Add julia-millboard. 
* gnu/packages/julia-xyz.scm (julia-millboard): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 14:08:46 +02:00
jgart f303eaa31b
gnu: Add julia-jive. 
* gnu/packages/julia-xyz.scm (julia-jive): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 14:08:46 +02:00
jgart 2eca48e310
gnu: Add julia-softglobalscope. 
* gnu/packages/julay-xyz.scm (julia-softglobalscope): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 14:08:46 +02:00
Giacomo Leidi ce6ea46d40
gnu: Add dynaconf. 
* gnu/packages/python-xyz.scm (dynaconf): New variable.
* gnu/packages/patches/dynaconf-Unvendor-dependencies.patch: New file.
* local.mk (dist_patch_DATA): Register it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 13:58:07 +02:00
Giacomo Leidi f8b1215874
gnu: Add python-dotenv-0.13.0. 
* gnu/packages/python-xyz.scm (python-dotenv-0.13.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 13:58:04 +02:00
Efraim Flashner 1e8ad167f6
gnu: python-dotenv: Run test suite. 
* gnu/packages/python-xyz.scm (python-dotenv)[arguments]: Add custom
'check phase.
 2021-12-01 13:58:04 +02:00
Giacomo Leidi a8d62aea22
gnu: Add python-dotenv. 
* gnu/packages/python-xyz.scm (python-dotenv): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 13:57:59 +02:00
Ricardo Wurmus 124d76c5c2
gnu: python2-numpydoc: Update to 0.9.1. 
* gnu/packages/python-xyz.scm (python2-numpydoc): Update to 0.9.1; do not
inherit from Python 3 variant.
 2021-12-01 11:39:58 +01:00
Ricardo Wurmus 38d648655b
gnu: python-numpydoc: Update to 1.1.0. 
* gnu/packages/python-xyz.scm (python-numpydoc): Update to 1.1.0.
[arguments]: Override 'check phase to run tests.
[native-inputs]: Remove python-nose; add python-matplotlib, python-pytest, and
python-pytest-cov.
 2021-12-01 11:39:58 +01:00
Alice BRENON 6367c92c6e
gnu: Add python-mwparserfromhell. 
* gnu/packages/python-web.scm (python-mwparserfromhell): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 11:22:42 +01:00
Efraim Flashner 619e0627a6
gnu: ruby-mocha: Update to 1.13.0. 
* gnu/packages/ruby.scm (ruby-mocha): Update to 1.13.0.
[home-page]: Update to new location.
 2021-12-01 11:39:14 +02:00
Efraim Flashner 68d090002a
gnu: tor: Fix build issue on some architectures. 
* gnu/packages/tor.scm (tor)[arguments]: Add phase to remove sandbox
during one of the tests.
 2021-12-01 11:38:33 +02:00
Vivien Kraus 762643e0fc
gnu: gnome-builder: Use libsoup 2. 
* gnu/packages/gnome.scm (gnome-builder) [phase 'patch-meson]: Don’t search
for webkit2gtk-4.1.
[inputs]: Replace devhelp with devhelp-with-libsoup2 and
webkit with webkit-with-libsoup2.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-12-01 10:01:44 +01:00
Vivien Kraus 89907521ef
gnu: devhelp: Add a libsoup 2 variant. 
* gnu/packages/gnome.scm (devhelp-with-libsoup2): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-12-01 10:01:38 +01:00
Charles f11605d96d
gnu: cl-yxorp: Update to 0.4. 
* gnu/packages/lisp-xyz.scm (sbcl-yxorp): Update to 0.4.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 09:44:03 +01:00
Sharlatan Hellseher 4beb013c84
gnu: Add cl-liballegro. 
* gnu/packages/lisp-xyz.scm: (sbcl-cl-liballegro, ecl-cl-liballegro,
  cl-liballegro): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 09:44:03 +01:00
Nicolas Vallet d7477f09c3
gnu: Add r-phyloseq. 
* gnu/packages/cran.scm (r-phyloseq): New variable

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 09:29:26 +01:00
Mathieu Othacehe 854120d01f
gnu: Remove duplicated patch. 
* gnu/local.mk (dist_patch_DATA): Remove duplicated line.
 2021-12-01 09:23:51 +01:00
Ricardo Wurmus 3411f8d512
gnu: Add r-fmcsr. 
* gnu/packages/bioconductor.scm (r-fmcsr): New variable.
 2021-11-30 22:48:07 +01:00
Mathieu Othacehe 6805ab3290
gnu: freecad: Fix build. 
* gnu/packages/patches/freecad-boost-serialization.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/engineering.scm (freecad) [source]: Use it.
[arguments]{#:configure-flags}: Turn it into a GEXP and adapt it.
 2021-11-30 21:27:13 +01:00
Mathieu Othacehe 2d0c5e2477
gnu: Remove vtk-8. 
* gnu/packages/image-processing.scm (vtk-8): Remove it.
 2021-11-30 21:27:13 +01:00
Mathieu Othacehe a5cdd82ecd
gnu: freecad: Switch to vtk-9. 
Switch to vtk-9 with the relevant patch to be able to get rid of vtk-8.

* gnu/packages/patches/freecad-vtk9.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/engineering.scm (freecad)[source]: Use it.
 2021-11-30 21:27:13 +01:00
Ricardo Wurmus e4e50229f1
gnu: python-cloudscraper: Update to 1.2.58. 
* gnu/packages/python-web.scm (python-cloudscraper): Update to 1.2.58.
[source]: Do not delete as many files in snippet; fetch sources via git.
[arguments]: Add build phase 'fix-references; replace 'check phase.
[inputs]: Add node.
[propagated-inputs]: Add python-js2py, python-polling2, and python-responses.
 2021-11-30 20:49:18 +01:00
Ricardo Wurmus 3b74b41498
gnu: Add python-polling2. 
* gnu/packages/python-xyz.scm (python-polling2): New variable.
 2021-11-30 20:49:10 +01:00
Ricardo Wurmus 1a13968210
gnu: Add python-js2py. 
* gnu/packages/python-web.scm (python-js2py): New variable.
 2021-11-30 20:48:34 +01:00
Ricardo Wurmus e35cfeb253
gnu: Add python-pyjsparser. 
* gnu/packages/python-web.scm (python-pyjsparser): New variable.
 2021-11-30 20:48:22 +01:00
Ricardo Wurmus 53a16a2143
gnu: Add r-seuratdata. 
* gnu/packages/cran.scm (r-seuratdata): New variable.
 2021-11-30 20:30:02 +01:00
Ricardo Wurmus 79bc812357
gnu: guile-wisp: Update to 1.0.6. 
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.6.
 2021-11-30 20:30:02 +01:00