me
/
guix
Archived
1
0
Fork 0
Commit Graph

103492 Commits (2cbb845e7d9263c4f2ea23a3f88f428bd2a801e1)

Author SHA1 Message Date
Ricardo Wurmus c2f9c0af28
gnu: r-rhdf5filters: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.12.0.
[arguments]: Add phase 'use-system-libraries.
[inputs]: Add bzip2, c-blosc, and zstd:lib.
[native-inputs]: Add r-biocstyle and r-rmarkdown.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 4e9e8ed194
gnu: r-rhdf5: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.44.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus cc5dc923a6
gnu: r-regioner: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.32.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 07a18fe524
gnu: r-rcas: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-rcas): Update to 1.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus bc5d14d246
gnu: r-rbgl: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-rbgl): Update to 1.76.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 70af2c3137
gnu: r-protgenerics: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-protgenerics): Update to 1.32.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 8e08912fcd
gnu: r-pcamethods: Update to 1.92.0.
* gnu/packages/bioconductor.scm (r-pcamethods): Update to 1.92.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus fdf3453dad
gnu: r-pcaexplorer: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-pcaexplorer): Update to 2.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus e408cd70e8
gnu: r-oscope: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-oscope): Update to 1.30.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 18d4032d2a
gnu: r-organismdbi: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.42.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 3c31e017e2
gnu: r-organism-dplyr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-organism-dplyr): Update to 1.28.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 394c951ba2
gnu: r-mzr: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.34.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 3e05ea0edb
gnu: r-mzid: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-mzid): Update to 1.38.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 6d09227e1f
gnu: r-msnid: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-msnid): Update to 1.34.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 6bbb3bedb1
gnu: r-msnbase: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 5c6355ca35
gnu: r-msa: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-msa): Update to 1.32.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus ba6ed3ff40
gnu: r-mutationalpatterns: Update to 3.10.0.
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.10.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 37e95f3c9c
gnu: r-muscat: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-muscat): Update to 1.14.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus da92987a4b
gnu: r-mmuphin: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-mmuphin): Update to 1.14.0.
[propagated-inputs]: Remove r-biocstyle.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 2ebeeeb438
gnu: r-methylkit: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-methylkit): Update to 1.26.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 15efeebe53
gnu: r-metaneighbor: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-metaneighbor): Update to 1.20.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 0ee6b4203d
gnu: r-metagenomeseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-metagenomeseq): Update to 1.42.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 380e27f153
gnu: r-maser: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-maser): Update to 1.18.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 3c8d7bd3c6
gnu: r-manor: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-manor): Update to 1.72.0.
2023-04-29 20:27:57 +02:00
Ricardo Wurmus 6e5c2c48df
gnu: r-makecdfenv: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-makecdfenv): Update to 1.76.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 4d1208e654
gnu: r-made4: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-made4): Update to 1.74.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 343036f151
gnu: r-maaslin2: Update to 1.13.0.
* gnu/packages/bioconductor.scm (r-maaslin2): Update to 1.13.0.
[propagated-inputs]: Remove r-mumin and r-rmarkdown.
[arguments]: Remove.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus d1da543257
gnu: r-limma: Update to 3.56.0.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus b962e908a0
gnu: r-keggrest: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.40.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 2c32ed3955
gnu: r-interactivedisplaybase: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-interactivedisplaybase): Update to 1.38.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus ab9cdb4082
gnu: r-impute: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-impute): Update to 1.74.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 8d8a7d55e2
gnu: r-rhtslib: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-rhtslib): Update to 2.2.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus c3882920fd
gnu: r-hpar: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.42.0.
[propagated-inputs]: Add r-experimenthub.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus fdc4c55da2
gnu: r-harshlight: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-harshlight): Update to 1.72.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus f7a3988fc7
gnu: r-gseabase: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-gseabase): Update to 1.62.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 57e4aab4ee
gnu: r-gostats: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-gostats): Update to 2.66.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 96613abcc5
gnu: r-globaltest: Update to 5.54.0.
* gnu/packages/bioconductor.scm (r-globaltest): Update to 5.54.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 5cb6453b43
gnu: r-glad: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-glad): Update to 2.64.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus a6f4e6e7fb
gnu: r-genomicranges: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.52.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 7c75371b19
gnu: r-genomicfiles: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.36.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 25ffc3d9ef
gnu: r-genomicfeatures: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 8e72841e03
gnu: r-genomicalignments: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus d87887a2ba
gnu: r-genomeinfodb: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus dac6f08730
gnu: r-genomation: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.32.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus ff563c9a60
gnu: r-geneoverlap: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus d7a10c3d52
gnu: r-genefilter: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.82.0.
[propagated-inputs]: Remove r-biocgenerics; add r-matrixgenerics.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 70c3d4ac37
gnu: r-gage: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-gage): Update to 2.50.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 476042884c
gnu: r-fastseg: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.46.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 3ce5803cac
gnu: r-ensembldb: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.24.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus f9b6a2ad85
gnu: r-enmix: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-enmix): Update to 1.36.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus cbe7726d68
gnu: r-edger: Update to 3.42.0.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 2a1f12e3d1
gnu: r-edaseq: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.34.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 59cecee237
gnu: r-dittoseq: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.12.0.
2023-04-29 20:27:56 +02:00
Ricardo Wurmus 70784f1dcf
gnu: r-dirichletmultinomial: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.42.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 876c2dcb74
gnu: r-diffcyt: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.20.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus f327d05ecc
gnu: r-dexseq: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.46.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus dc78185fc7
gnu: r-deseq2: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.40.0.
[propagated-inputs]: Remove r-geneplotter.
[native-inputs]: Add r-rmarkdown.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 176c45cb21
gnu: r-complexheatmap: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.16.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus f86ea9868a
gnu: r-chipseq: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.50.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 219901a7b2
gnu: r-chipseeker: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.36.0.
[propagated-inputs]: Remove r-ggvenndiagram and r-rcolorbrewer; add r-aplot, r-tibble,
and r-yulab-utils.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 6c700d8b3a
gnu: r-champ: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-champ): Update to 2.30.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 7b4443f365
gnu: r-category: Update to 2.66.0.
* gnu/packages/bioconductor.scm (r-category): Update to 2.66.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 5d526f71c8
gnu: r-bsgenome: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.68.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 9201a7728b
gnu: r-biovizbase: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.48.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus bbd90f85b9
gnu: r-biostrings: Update to 2.68.0.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.68.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus c9d5ec9e66
gnu: r-biocparallel: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus d0199e0c5c
gnu: r-biomart: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.56.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 766fb8a21c
gnu: r-biobase: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-biobase): Update to 2.60.0.
[native-inputs]: Add r-knitr.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus b8c4b8b44f
gnu: r-bamsignals: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.32.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 968878ef27
gnu: r-aroma-light: Update to 3.30.0.
* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.30.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 83b381a95b
gnu: r-annotationhub: Update to 3.8.0.
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.8.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus f6c878674f
gnu: r-annotationforge: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.42.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus aa97ff9c34
gnu: r-annotationfilter: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.24.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 46ff186f73
gnu: r-annotationdbi: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.62.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus d9d1b77c84
gnu: r-annotate: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.78.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 4f2c3411ec
gnu: r-affxparser: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.72.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 1b4dd53a4f
gnu: r-affyio: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-affyio): Update to 1.70.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 5d8d8c2256
gnu: r-affycoretools: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.72.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus a7485d9850
gnu: r-affycontam: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.58.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus b121b78bda
gnu: r-affycomp: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.76.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 6a19dd1e21
gnu: r-affy: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 21b305edbe
gnu: r-italics: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-italics): Update to 2.60.0.
2023-04-29 20:27:55 +02:00
Ricardo Wurmus 669d0d17da
gnu: r-isoformswitchanalyzer: Update to 1.21.0.
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 1.21.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus a0846151b3
gnu: r-iranges: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.34.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 116bc67509
gnu: r-infercnv: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.16.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 09260401c4
gnu: r-ideoviz: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.36.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus e057271297
gnu: r-bluster: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-bluster): Update to 1.10.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 0ef0e70d81
gnu: r-dss: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-dss): Update to 2.48.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 72bfb25766
gnu: r-drimseq: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-drimseq): Update to 1.28.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus c901f7c4f3
gnu: r-dmrcate: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 2.14.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus b23aac21d5
gnu: r-derfinderhelper: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-derfinderhelper): Update to 1.34.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus b7b1423882
gnu: r-delayedarray: Update to 0.25.0.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.25.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus c179c05e35
gnu: r-deepsnv: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.46.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 57bb01b808
gnu: r-decoupler: Update to 2.6.0.
* gnu/packages/bioconductor.scm (r-decoupler): Update to 2.6.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 28b2d8a1e3
gnu: r-deconvr: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.6.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 228c0fae2b
gnu: r-decontam: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-decontam): Update to 1.20.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 37a7539db3
gnu: r-deconrnaseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-deconrnaseq): Update to 1.42.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 8ccd86a17b
gnu: r-decomptumor2sig: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-decomptumor2sig): Update to 2.16.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus c9794ffe59
gnu: r-decipher: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-decipher): Update to 2.28.0.
2023-04-29 20:27:54 +02:00
Ricardo Wurmus 52e738d346
gnu: r-debcam: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-debcam): Update to 1.18.0.
[source]: Delete bundled Java archives.
[arguments]: Add phase 'build-jar; add phase 'strip-jar-timestamps; do a fake
installation and disable tests due to a regression in R 4.3.0.
[inputs]: Replace openjdk with icedtea:jdk; add java-pj.
[native-inputs]: Add zip.
2023-04-29 20:27:17 +02:00
Ricardo Wurmus 2bf6f659c4
gnu: Add java-pj.
* gnu/packages/java.scm (java-pj): New variable.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 4837210129
gnu: r-dearseq: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.12.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 8f93a53a4c
gnu: r-damefinder: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-damefinder): Update to 1.12.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 01ba2a24d2
gnu: r-dama: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-dama): Update to 1.72.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 9b305554a3
gnu: r-cummerbund: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.42.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 6233b26d1d
gnu: r-coverageview: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.38.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus f869abfae3
gnu: r-cardelino: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-cardelino): Update to 1.2.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 084e990d2f
gnu: r-breakpointr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-breakpointr): Update to 1.18.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus cb191936d8
gnu: r-biocgenerics: Update to 0.46.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.46.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 3b302bdf35
gnu: r-biocversion: Update to 3.17.1.
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.17.1.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus ae85652e4b
gnu: r-barcodetrackr: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-barcodetrackr): Update to 1.8.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 41bff44b32
gnu: r-banocc: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-banocc): Update to 1.24.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus c6d14bd6fb
gnu: r-bandits: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-bandits): Update to 1.16.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 7bce4cdacb
gnu: r-bambu: Update to 3.2.0.
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus 4f4d38cc4d
gnu: r-badregionfinder: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-badregionfinder): Update to 1.28.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus e10c8fe41a
gnu: r-bader: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-bader): Update to 1.38.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus ff5191816e
gnu: r-basespacer: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-basespacer): Update to 1.44.0.
2023-04-29 20:09:33 +02:00
Ricardo Wurmus bc466e59b8
gnu: r-baalchip: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-baalchip): Update to 1.26.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 14191d89a7
gnu: r-awst: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-awst): Update to 1.8.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus d12336de7d
gnu: r-awfisher: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-awfisher): Update to 1.14.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus ed2578b585
gnu: r-attract: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-attract): Update to 1.52.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 36aa29a62f
gnu: r-atsnp: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-atsnp): Update to 1.16.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 9f61c365a4
gnu: r-atena: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-atena): Update to 1.6.0.
[propagated-inputs]: Remove r-scales.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 7751b88692
gnu: r-asset: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-asset): Update to 2.18.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 32b0da7762
gnu: r-assessorf: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-assessorf): Update to 1.18.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 0968cf8f55
gnu: r-aspli: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-aspli): Update to 2.10.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus ba469d4674
gnu: r-asics: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-asics): Update to 2.16.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus d3ae3e616e
gnu: r-asgsca: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-asgsca): Update to 1.34.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus e1e75eec31
gnu: r-aseb: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-aseb): Update to 1.44.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 4a5f8cede6
gnu: r-asafe: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-asafe): Update to 1.26.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 5329b80aa1
gnu: r-arrayexpress: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-arrayexpress): Update to 1.60.0.
[propagated-inputs]: Remove r-xml; add r-httr, r-jsonlite, and r-rlang.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 0e88aa5b07
gnu: r-antiprofiles: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-antiprofiles): Update to 1.40.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus b77e71f07c
gnu: r-annmap: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-annmap): Update to 1.42.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 18ad546d0a
gnu: r-anf: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-anf): Update to 1.22.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 099340458b
gnu: r-aneufinder: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.28.0.
[propagated-inputs]: Remove r-reordercluster.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 8e5e97293d
gnu: r-altcdfenvs: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-altcdfenvs): Update to 2.62.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 55f6d75cdb
gnu: r-alpsnmr: Update to 4.2.0.
* gnu/packages/bioconductor.scm (r-alpsnmr): Update to 4.2.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus dec3658f6b
gnu: r-alpine: Update to 1.25.0.
* gnu/packages/bioconductor.scm (r-alpine): Update to 1.25.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 19636f0341
gnu: r-alphabeta: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.14.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 76ffa191be
gnu: r-alevinqc: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.16.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 769af4fda7
gnu: r-aldex2: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-aldex2): Update to 1.32.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 87932885ea
gnu: r-anvil: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.12.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus fd5e94f6df
gnu: r-annotationhubdata: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-annotationhubdata): Update to 1.30.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 6027d657bd
gnu: r-animalcules: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.16.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 71b23bf5e1
gnu: r-ancombc: Update to 2.2.0.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus 1f753b82c1
gnu: r-anaquin: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-anaquin): Update to 2.24.0.
2023-04-29 20:09:32 +02:00
Ricardo Wurmus ab79d3a4b8
gnu: r-amaretto: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.16.0.
2023-04-29 20:09:31 +02:00
Ricardo Wurmus 4b2295bd4f
gnu: r-amplican: Update to 1.21.0.
* gnu/packages/bioconductor.scm (r-amplican): Update to 1.21.0.
2023-04-29 20:09:31 +02:00
Ricardo Wurmus a49b8d3be0
gnu: r-amountain: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-amountain): Update to 1.26.0.
2023-04-29 20:09:31 +02:00
Ricardo Wurmus 945ed79525
gnu: r-airpart: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-airpart): Update to 1.8.0.
2023-04-29 20:09:31 +02:00