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4263 Commits (39a29fc4c180e16c78f78036a2986a26d1a883fc)

Author SHA1 Message Date
Ricardo Wurmus cf5cb0875b
gnu: r-delayedmatrixstats: Update to 1.22.6. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.6.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus c8e7ea8a8b
gnu: r-rhdf5lib: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.22.1.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus ebaf944cdd
gnu: r-s4arrays: Update to 1.0.6. 
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.6.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 9232ef7986
gnu: r-clusterprofiler: Update to 4.8.3. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.8.3.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 8cfd6e804a
gnu: r-greylistchip: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-greylistchip): Update to 1.32.1.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 8fe9e14917
gnu: r-tcgautils: Update to 1.20.4. 
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.20.4.
[propagated-inputs]: Add r-biocbaseutils.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 7f983fb730
gnu: r-shinymethyl: Update to 1.36.1. 
* gnu/packages/bioconductor.scm (r-shinymethyl): Update to 1.36.1.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus a1245f559d
gnu: r-genomicdatacommons: Update to 1.24.3. 
* gnu/packages/bioconductor.scm (r-genomicdatacommons): Update to 1.24.3.
[propagated-inputs]: Add r-tidyr.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 6e06c0032c
gnu: r-genomeinfodb: Update to 1.36.3. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.3.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus bf9cd9521a
gnu: r-htscluster: Update to 2.0.11. 
* gnu/packages/bioconductor.scm (r-htscluster): Update to 2.0.11.
 2023-09-14 00:04:05 +02:00
Ricardo Wurmus 8f59ac151f
gnu: r-abn: Update to 3.0.0. 
* gnu/packages/bioconductor.scm (r-abn): Update to 3.0.0.
[propagated-inputs]: Add r-mclogit and r-stringi.
 2023-09-13 23:14:38 +02:00
Navid Afkhami cda20190bc
gnu: Add r-interactivedisplay. 
* gnu/packages/bioconductor.scm (r-interactivedisplay): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-09-13 12:10:06 +02:00
Navid Afkhami 8c0c94bf9f
gnu: Add r-trackviewer. 
* gnu/packages/bioconductor.scm (r-trackviewer): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-09-02 11:55:23 +02:00
Ricardo Wurmus 3335903d7d
gnu: r-tximeta: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 99ddc62840
gnu: r-dmrseq: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.20.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 7b93c6d88e
gnu: r-bionero: Update to 1.8.7. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.8.7.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 86f9555ef0
gnu: r-gviz: Update to 1.44.1. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 4ab9700e29
gnu: r-delayedmatrixstats: Update to 1.22.5. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.5.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus b200824114
gnu: r-scran: Update to 1.28.2. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.28.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 6567ce830f
gnu: r-scuttle: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.10.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 362f3cdb8e
gnu: r-s4arrays: Update to 1.0.5. 
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.5.
[propagated-inputs]: Add r-abind.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 790f0569f4
gnu: r-biocpkgtools: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.18.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 3602e0b41d
gnu: r-biocviews: Update to 1.68.2. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 55e0bd5c7a
gnu: r-flowworkspace: Update to 4.12.2. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.12.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus dc23a12566
gnu: r-rprotobuflib: Update to 2.12.1. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.12.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 5cc62530b9
gnu: r-ggcyto: Update to 1.28.1. 
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.28.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 36cf325b1e
gnu: r-flowcore: Update to 2.12.2. 
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.12.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus ceb698380c
gnu: r-ggtree: Update to 3.8.2. 
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.8.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 4998f1538b
gnu: r-treeio: Update to 1.24.3. 
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.3.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus b336a58135
gnu: r-matrixgenerics: Update to 1.12.3. 
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.12.3.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 59056368d0
gnu: r-diffbind: Update to 3.10.1. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.10.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 6346338d58
gnu: r-stringdb: Update to 2.12.1. 
* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.12.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus ba4f688670
gnu: r-spectra: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-spectra): Update to 1.10.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus ce88bfafc3
gnu: r-raggedexperiment: Update to 1.24.2. 
* gnu/packages/bioconductor.scm (r-raggedexperiment): Update to 1.24.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 8365b201f4
gnu: r-gsva: Update to 1.48.3. 
* gnu/packages/bioconductor.scm (r-gsva): Update to 1.48.3.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus dcc2d9a843
gnu: r-genomicfeatures: Update to 1.52.2. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.52.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus c5ce710a4a
gnu: r-genomeinfodb: Update to 1.36.2. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus eca138fd06
gnu: r-dittoseq: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.12.1.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus 00d8ba65aa
gnu: r-affy: Update to 1.78.2. 
* gnu/packages/bioconductor.scm (r-affy): Update to 1.78.2.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus d3bebefa9b
gnu: r-dmrcate: Update to 2.14.1. 
* gnu/packages/bioconductor.scm (r-dmrcate): Update to 2.14.1.
[propagated-inputs]: Add r-biomart.
 2023-08-28 22:15:47 +02:00
Ricardo Wurmus e868377a7d
gnu: r-densvis: Update to 1.10.3. 
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.3.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus d0f065d0b1
gnu: r-delayedarray: Update to 0.26.7. 
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.7.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus 1119ecbd79
gnu: r-bambu: Update to 3.2.6. 
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.6.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus 6c502065dc
gnu: r-anvil: Update to 1.12.4. 
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.12.4.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus 17c8517035
gnu: r-cytolib: Update to 2.12.1. 
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.12.1.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus ad05356b84
gnu: r-enrichplot: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.20.1.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus 607214f953
gnu: r-lefser: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-lefser): Update to 1.10.1.
[propagated-inputs]: Add r-s4vectors.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus 88f973a21b
gnu: r-rtracklayer: Update to 1.60.1. 
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.60.1.
[inputs]: Add openssl.
 2023-08-28 22:15:46 +02:00
Ricardo Wurmus b4c7fe02ae
gnu: Add r-lea. 
* gnu/packages/bioconductor.scm (r-lea): New variable.
 2023-08-28 18:06:50 +02:00
Ricardo Wurmus 28e9d08364
gnu: Add r-sesame. 
* gnu/packages/bioconductor.scm (r-sesame): New variable.
 2023-08-28 18:03:46 +02:00