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2808 Commits (3fdb01f1f5a5f7cdf347a43ecc00a62df3a5ca8d)

Author SHA1 Message Date
Ludovic Courtès 3d85c3ec65
gnu: pciutils: Fix compilation error on GNU/Hurd.
* gnu/packages/patches/pciutils-hurd-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pciutils.scm (pciutils)[arguments]: Add
'apply-hurd-patch' phase when (hurd-target?) is true.
[inputs]: Add "hurd-patch" entry when (hurd-target?) is true.
2020-12-09 14:13:33 +01:00
Zhu Zihao ad6cf3d4ad
gnu: Add xcb-imdkit.
* gnu/packages/fcitx5.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2020-12-08 20:31:47 +08:00
Efraim Flashner 3832704aff
gnu: minimap2: Fix build on aarch64-linux.
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Adjust
configure-flags to be better per-architecture.
[source]: Add patch.
* gnu/packages/patches/minimap2-aarch64-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2020-12-07 12:48:07 +02:00
Tobias Geerinckx-Rice ac50633c15
gnu: hplip: Update to 3.20.11.
* gnu/packages/cups.scm (hplip): Update to 3.20.11.
[source]: Remove upstreamed patch.
* gnu/packages/patches/hplip-fix-bug-1898438.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-12-06 23:50:44 +01:00
Tobias Geerinckx-Rice 6a84fddcaa
gnu: pam-mount: Update to 2.17.
* gnu/packages/admin.scm (pam-mount): Update to 2.17.
[source]: Remove upstreamed patch.
* gnu/packages/patches/pam-mount-luks2-support.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-12-06 23:50:43 +01:00
Simon South 4fcff59091
gnu: knot-resolver: Update to 5.2.0.
* gnu/packages/dns.scm (knot-resolver): Update to 5.2.0.
[source]: Add patch from upstream commit to fix the internal map() function on
32-bit platforms.
[native-inputs]: Add texinfo to enable generating the manual in Info format.
[inputs]: Add nghttp2:lib to enable the new DNS-over-HTTPS implementation.
* gnu/packages/patches/knot-resolver-fix-map-command-on-32-bit.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2020-12-06 18:27:52 +08:00
Brett Gilio 937bc58414
gnu: Add libexpected.
* gnu/packages/cpp.scm (libexpected): New variable.
* gnu/packages/patches/libexpected-nofetch.patch: Add patch.
* gnu/local.mk: Reference patch.
2020-12-05 21:10:59 -06:00
Guillaume Le Vaillant 031fbebafe
gnu: cl-asdf: Improve priorities of configuration file search.
* gnu/packages/patches/cl-asdf-config-directories.patch: New file.
* gnu/local.mk (dist_PATCH_DATA): Add it.
* gnu/packages/lisp.scm (cl-asdf)[native-inputs]: Add it.
  [arguments]: Apply the new patch.

Co-authored-by: Pierre Neidhardt <mail@ambrevar.xyz>
2020-12-05 16:00:57 +01:00
Danny Milosavljevic 9cf531f577
images: Add novena-image-type, novena-barebones-raw-image, novena-barebones-os.
* gnu/system/images/novena.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2020-12-03 12:11:00 +01:00
Marius Bakke 04b8367865
Revert "gnu: python-packaging: Update to 20.4."
This reverts commit 71b15b4874.
2020-12-01 23:23:10 +01:00
Guillaume Le Vaillant 718dd9779a
gnu: clisp: Remove unused patch.
This is a follow-up for 074236d197.

* gnu/patches/clisp-remove-failing-test.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-12-01 11:52:34 +01:00
Guillaume Le Vaillant 0809e4a4fa
gnu: Add clml.
* gnu/packages/lisp-xyz.scm (cl-clml, sbcl-clml): New variables.
* gnu/packages/patches/sbcl-clml-fix-types.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-12-01 11:52:34 +01:00
Tanguy Le Carrour 71b15b4874
gnu: python-packaging: Update to 20.4.
* gnu/packages/python-xyz.scm (python-packaging): Update to 20.4.
[source]: Remove patch that has been merged upstream.
* gnu/packages/patches/python-packaging-test-arch.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply removal.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-11-30 22:04:13 +01:00
Tobias Geerinckx-Rice 739174947e
gnu: sudo: Update to 1.9.4.
* gnu/packages/admin.scm (sudo): Update to 1.9.4.
[source]: Add patch.
* gnu/packages/patches/sudo-fix-build-without-sendmail.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-30 21:43:36 +01:00
Maxim Cournoyer c601e2bf9a
gnu: weasyprint: Update to 52.1.
Fixes <https://issues.guix.gnu.org/42409>.

* gnu/packages/patches/weasyprint-library-paths.patch: Delete.
* gnu/packages/pdf.scm (weasyprint): Update to 52.1
[phases]{patch-library-paths}: Adjust.
{check}: Remove.
{register-dejavu-font}: New phase.
[native-inputs]: Add font-dejavu.
2020-11-29 14:02:48 -05:00
Maxim Cournoyer fc72594c28
gnu: python-tinycss2: Update to 1.1.0.
* gnu/packages/patches/python-tinycss2-flake8-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
* gnu/packages/python-web.scm (python-tinycss2): Update to 1.1.0.
[source]: Remove patch.
[arguments]: Remove field, disabling tests.
[native-inputs]: Remove field.
2020-11-29 14:02:47 -05:00
Maxim Cournoyer 4035c2e402
gnu: python-cairocffi: Update to 1.2.0.
* gnu/packages/python-xyz.scm (python-cairocffi): Update to 1.2.0.
[source]: Fetch from Git.
[patches]: Remove field.
[inputs]: Remove pango.
[native-inputs]: Remove pkg-config and python-docutils.  Add python-numpy and
python-sphinx-rtd-theme.
[phases]{patch-paths}: Adjust.  Fix the patching of gdk-3.
{disable-linters}: New phase.
{install-doc}: Adjust.  The license file is now installed by a build phase.
* gnu/packages/patches/python-cairocffi-dlopen-path.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
2020-11-29 14:02:46 -05:00
Marius Bakke 4dadb49779
Merge branch 'staging' 2020-11-28 22:39:12 +01:00
Vinicius Monego c76d0201f7
gnu: Add gnash.
* gnu/packages/animation.scm (gnash): New variable.
* gnu/packages/patches/gnash-fix-giflib-version: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-28 15:56:08 +00:00
Simon South 1d63445168
gnu: Transmission: Fix localization of transmission-gtk.
* gnu/packages/bittorrent.scm (transmission)[source]: Add patch to make
Transmission honor the "localedir" option to its configure script.
[arguments]<configure-flags>: Use "localedir" to set the "gui" output as the
location for (GTK-specific) localization data.
<phases>: Update "move-gui" to remove a now-superfluous call to "mkdir" and omit
"share/locale" from the list of directories needing to be moved between outputs.
* gnu/packages/patches/transmission-honor-localedir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-11-27 23:40:53 -05:00
Marius Bakke 24c86ad0c0
Merge branch 'master' into staging 2020-11-26 23:59:28 +01:00
Marius Bakke 00a85828b0
gnu: python-aiohttp: Update to 3.7.3.
* gnu/packages/patches/python-aiohttp-3.6.2-no-warning-fail.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-web.scm (python-aiohttp)[source](patches): Remove.
[arguments]: Use UTIME instead of calling out to 'touch'.  Don't delete
now-working tests; but disable some new ones.  Replace the 'check' phase.
[propagated-inputs]: Add PYTHON-TYPING-EXTENSIONS.
[native-inputs]: Remove PYTHON-PYTEST-RUNNER, PYTHON-PYTEST-XDIST,
PYTHON-PYTEST-TIMEOUT, and PYTHON-PYTEST-FORKED.  Add PYTHON-PYTEST and
PYTHON-RE-ASSERT.
2020-11-26 21:00:32 +01:00
Jesse Gibbons 81fbe03b50
gnu: openssh: Fix ssh-copy-id.
* gnu/packages/patches/openssh-fix-ssh-copy-id.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-11-25 22:09:28 -05:00
Marius Bakke bff94a5a53
Merge branch 'master' into staging 2020-11-26 01:08:35 +01:00
Tobias Geerinckx-Rice 8b6ce47ccc
gnu: mupdf: Use only dynamic linking.
* gnu/packages/pdf.scm (mupdf)[source]: Add patch.
[arguments]: Build and find the shared library.
(zathura-pdf-mupdf)[arguments]: Add a 'remove-libmupdfthird.a-requirement
phase to deal with the now-missing static one.
* gnu/packages/patches/mupdf-fix-linkage.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-24 15:58:49 +01:00
Marius Bakke 87a027243f
Merge branch 'master' into staging 2020-11-23 23:39:47 +01:00
Tobias Geerinckx-Rice ba902a1598
gnu: eigen: Add upstream bugfix patch.
This fixes the build of nanopolish, imp, and others.

Reported by apteryx in #guix.

* gnu/packages/algebra.scm (eigen)[source]: Add patch.
* gnu/packages/patches/eigen-remove-openmp-error-counting.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-23 19:22:31 +01:00
Efraim Flashner b1aac582ca
gnu: python-pydot: Run tests.
* gnu/packges/graphviz.scm (python-pydot)[source]: Add patch.
[arguments]: Override check phase.
[native-inputs]: Add graphviz.
* gnu/packages/patches/python-pydot-regression-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2020-11-23 15:43:36 +02:00
Tobias Geerinckx-Rice 2bf502138c
gnu: lsof: Make test failures fatal.
* gnu/packages/lsof.scm (lsof)[source]: Add patch to make test suite
failures stop the build.
* gnu/packages/patches/lsof-fatal-test-failures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-23 05:44:10 +01:00
Brett Gilio 0ada181aa1
gnu: ocaml-cairo2: Patch test phase.
* gnu/local.mk (ocaml-cairo2-caml_ba_array_fix.patch): Add ref.
* gnu/packages/ocaml.scm (ocaml-cairo2): Utilize patch.
* gnu/packages/patches/ocaml-cairo2-caml_ba_array-fix.patch: Add file.
2020-11-22 21:02:59 -06:00
Marius Bakke a485a98ca8
Merge branch 'master' into staging 2020-11-22 23:36:09 +01:00
Tobias Geerinckx-Rice 155e3c775a
gnu: xpra: Update to 4.0.5.
* gnu/packages/xorg.scm (xpra): Update to 4.0.5.
[source]: Remove xpra-4.0.4-norequests.patch.
* gnu/packages/patches/xpra-4.0.4-norequests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-11-21 00:29:38 +01:00
Mathieu Othacehe 17d9a91e6b
image: Add pinebook-pro support.
* gnu/system/images/pinebook-pro.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/ci.scm (%guix-system-images): Add pinebook-pro-barebones-raw-image.
2020-11-20 17:00:27 +01:00
Marius Bakke 02b4b10568
gnu: grim: Remove obsolete patch.
* gnu/packages/patches/grim-revert-output-rotation.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image.scm (grim)[source](patches): Remove.
2020-11-20 00:10:11 +01:00
Tobias Geerinckx-Rice c18803f28d
gnu: gajim: Honour $GAJIM_PLUGIN_PATH.
This allows Gajim to find plug-ins installed with Guix.
Reported at <http://issues.guix.gnu.org/44730>.

However, at the time of pushing both packaged plug-ins (gajim-omemo and
gajim-openpgp) require an unstable version of Gajim and will not load.

* gnu/packages/messaging.scm (gajim)[arguments]: Replace the
‘add-plugin-dirs’ substitution phase with a...
[source]: ...patch that won't silently break in the future.
* gnu/packages/patches/gajim-honour-GAJIM_PLUGIN_PATH.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-19 22:16:18 +01:00
Marius Bakke 35ed83beae
Merge branch 'master' into staging 2020-11-19 00:04:32 +01:00
Simon South fa268b28e1
gnu: bitcoin-core: Update to 0.20.1.
* gnu/packages/finance.scm (bitcoin-core): Update to 0.20.1.
[source]: Remove obsolete patch.
[native-inputs]: Add autoconf, automake and libtool.
[inputs]: Remove protobuf.
[arguments]: Add "set-no-git-flag" phase to indicate the build is not taking
place within a git repository.
* gnu/packages/patches/bitcoin-core-python-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-18 08:44:43 +00:00
Maxim Cournoyer 129b9b16d9
Merge remote-tracking branch 'origin/version-1.2.0' into master
Conflicts:
	gnu/packages/bioinformatics.scm

The python-pysam package fixed in master was kept instead of the update done
in the version-1.2.0 branch.
2020-11-17 18:00:28 -05:00
Eric Bavier 3aec121e95
gnu: tomb: Update to 2.8.
Fixes CVE-2020-28638.

* gnu/packages/crypto.scm (tomb): Update to 2.8
[source]: Remove obsolete patch.
* gnu/packages/patches/tomb-fix-errors-on-open.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-11-17 09:52:04 -06:00
Danny Milosavljevic f2c6375449
gnu: gcc-vc4: Update to commit 0fe4b83897341742f9df65797474cb0feab4b377.
* gnu/packages/patches/gcc-6-fix-buffer-size.patch: New file.
* gnu/packages/patches/gcc-6-fix-isl-includes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/embedded.scm (gcc-vc4): Update to commit
0fe4b83897341742f9df65797474cb0feab4b377.
[source]: Add the patches from above.
2020-11-16 15:02:48 +01:00
Tobias Geerinckx-Rice b91e0a5a14
gnu: scribus: Update to 1.5.6.
* gnu/packages/scribus.scm (scribus): Update to 1.5.6.
[source]: Remove patch.
[inputs]: Substitute python for python-2.
* gnu/packages/patches/scribus-1.5.5-poppler-0.86-build-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-11-16 04:11:46 +01:00
Marius Bakke 4e5e05d409
Merge branch 'master' into staging 2020-11-15 23:45:34 +01:00
Tobias Geerinckx-Rice 80817b5098
gnu: multipath-tools: Update to 0.8.5.
* gnu/packages/linux.scm (multipath-tools): Update to 0.8.5.
[source]: Remove patch.
[arguments]: Add a ‘skip-failing-tests’ phase.
* gnu/packages/patches/multipath-tools-sans-systemd.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-11-15 00:12:12 +01:00
Tobias Geerinckx-Rice 2c560aa217
gnu: perl-www-curl: Fix build with curl@7.69.1.
* gnu/packages/web.scm (perl-www-curl)[source]:
Add perl-www-curl-fix-struct-void.patch.
* gnu/packages/patches/perl-www-curl-remove-symbol.patch: Update.
* gnu/packages/patches/perl-www-curl-fix-struct-void.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-15 00:12:11 +01:00
Ludovic Courtès ae10ec441a
gnu: glib: Graft patch to detect changes to the installed applications.
Fixes <https://bugs.gnu.org/35594>.
Reported by sirgazil <sirgazil@zoho.com> and others.

* gnu/packages/patches/glib-appinfo-watch.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/glib.scm (glib)[replacement]: New field.
(glib-with-gio-patch): New variable.
(glib-with-documentation): Use 'package/inherit'.
2020-11-13 09:13:56 +01:00
Ludovic Courtès 07914def98
Merge branch 'version-1.2.0' 2020-11-12 10:47:25 +01:00
Simon Josefsson 29cf85b857
gnu: oath-toolkit: Update to 2.6.3.
* gnu/packages/authentication.scm (oath-toolkit): Update to 2.6.3.
[source]: Remove obsolete patches.
* gnu/packages/patches/oath-toolkit-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-11-10 21:19:03 -05:00
Marius Bakke a9a0d34874
Merge branch 'master' into staging 2020-11-11 00:02:32 +01:00
Simon South 6f4c9ff6ec
gnu: sdcc: Remove non-free code.
* gnu/packages/sdcc.scm (sdcc)[source]: Add snippet to remove bundled non-free
source code.
Add patch to disable use of non-free code in build scripts and compiler and
update documentation to match.
* gnu/packages/patches/sdcc-disable-non-free-code.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-11-10 22:32:13 +01:00
Ludovic Courtès 8515ea12d2
gnu: audiofile: Shorten patch file names.
At least 'audiofile-division-by-zero-BlockCodec-runPull.patch' could end
up not being included in a tarball.

* gnu/packages/patches/audiofile-Check-the-number-of-coefficients.patch:
Rename to...
* gnu/packages/patches/audiofile-check-number-of-coefficients.patch:
... this.
* gnu/packages/patches/audiofile-division-by-zero-BlockCodec-runPull.patch:
Rename to...
* gnu/packages/patches/audiofile-division-by-zero.patch: ....this.
* gnu/packages/patches/audiofile-signature-of-multiplyCheckOverflow.patch:
Rename to...
* gnu/packages/patches/audiofile-function-signature.patch: ... this.
* gnu/packages/patches/audiofile-Fix-multiply-overflow-sfconvert.patch:
Rename to....
* gnu/packages/patches/audiofile-multiply-overflow.patch: ... this.
* gnu/packages/patches/audiofile-Fix-overflow-in-MSADPCM-decodeSam.patch:
Rename to...
* gnu/packages/patches/audiofile-overflow-in-MSADPCM.patch: ... this.
* gnu/packages/audio.scm (audiofile)[source]: Adjust accordingly.
* gnu/local.mk (dist_patch_DATA): Likewise.
2020-11-10 17:49:14 +01:00