me
/
guix
Archived
1
0
Fork 0
Code
86,182 Commits
1 Branch
0 Tags
410 MiB
Commit Graph

77088 Commits (51bf893e53c5097f35a440eafc38c0728d6bc38a)

Author SHA1 Message Date
Ricardo Wurmus b15a525703
gnu: Add python-biothings-client. 
* gnu/packages/bioinformatics.scm (python-biothings-client): New variable.
 2021-12-02 11:57:13 +01:00
Ricardo Wurmus c2c63a00de
gnu: Add r-scdblfinder. 
* gnu/packages/bioconductor.scm (r-scdblfinder): New variable.
 2021-12-02 10:03:07 +01:00
Leo Famulari bef86fed3e
Revert "gnu: godot: Update to 3.4." 
This reverts commit dd4365efa1.

We reverted this commit because it broke the operation of the only
package in Guix that depends on Godot, SuperStarfighter:

https://debbugs.gnu.org/cgi/bugreport.cgi?bug=52233#20
 2021-12-02 01:27:12 -05:00
cage 934a246409
gnu: cl-tooter: Update to 1.0.0-3.ec97bee. 
* gnu/packages/lisp-xyz.scm (cl-tooter): Update to 1.0.0-3.ec97bee.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-12-02 00:12:58 -05:00
cage e9e2204897
gnu: cl-i18n: Update to 0.5.1-1.4216fe9. 
* gnu/packages/lisp-xyz.scm (cl-i18n): Update to 0.5.1-1.4216fe9.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-12-02 00:12:57 -05:00
Andy Tai dd4365efa1
gnu: godot: Update to 3.4. 
* gnu/packages/game-development.scm (godot): Update to 3.4.
[source]: Add new bundled dependencies to the origin snippet.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2021-12-02 00:02:47 -05:00
Leo Famulari 7a171235af
gnu: linux-libre 4.19: Update to 4.19.219. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.219.
(linux-libre-4.19-pristine-source): Update hash.
 2021-12-01 18:43:05 -05:00
Leo Famulari 6f18f35297
gnu: linux-libre 5.4: Update to 5.4.163. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.163.
(linux-libre-5.4-pristine-source): Update hash.
 2021-12-01 18:43:05 -05:00
Leo Famulari f01588736c
gnu: linux-libre 5.10: Update to 5.10.83. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.83.
(linux-libre-5.10-pristine-source): Update hash.
 2021-12-01 18:43:05 -05:00
Leo Famulari c3ec5eaa75
gnu: linux-libre: Update to 5.15.6. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.6.
(linux-libre-5.15-pristine-source): Update hash.
 2021-12-01 18:43:02 -05:00
Ricardo Wurmus d53679c531
gnu: Remove couger. 
This package has been moved to the Guix Past channel.

* gnu/packages/bioinformatics.scm (couger): Remove variable.
 2021-12-02 00:32:12 +01:00
Ricardo Wurmus cd40978a4b
gnu: randomjungle: Fix compatibility errors. 
* gnu/packages/machine-learning.scm (randomjungle)[arguments]: Add build phase
'fix-compatibility-errors to patch type errors.
 2021-12-02 00:32:12 +01:00
Jonathan Brielmaier a63231003e
gnu: icecat: Remove leftovers of release 78. 
No longer required as icedove is now based on the 91 branch.

* gnu/packages/gnuzilla.scm (mozilla-78-compare-locales): Remove.
(all-mozilla-78-locales): Remove.
(%icecat-78-version): Remove.
(icecat-78-source): Remove.
 2021-12-01 22:07:00 +01:00
Jonathan Brielmaier 52cb5cf5b8
gnu: icedove: Update to 91.3.2. 
The profile folder moved from `~/.icedove` to `~/.thunderbird`. You may
need to migrate (copy) your profile over.

* gnu/packages/gnuzilla.scm (icedove): Update to 91.3.2.
[source]: Switch back to icecat-source.
[arguments]: `obj-x86_64-pc-linux-gnu` folder is now generated during
build, so it can't deleted in front. Remove surounding `'` from
MOZ_DEDICATED_PROFILES to follow source code. MOZ_APP_BASENAME and
MOZ_APP_DISPLAYNAME are no longer set in `comm/mail/confvars.sh`. Update
path of `customizeToolbar.js`.
Delete `'bootstrap` phase and no longer set AUTOCONF variable as the
autoconf build part was removed. Set MACH_USE_SYSTEM_PYTHON and
MOZ_APP_NAME, the latter is the binary name.
`--enable-calendar` flag got removed. Use bundled NSS until
core-updates merge.
[inputs]: Update to `icu4c-69` and `nspr-4.32`. Use bundled NSS for now.
[native-inputs]: Switch to comm-esr91 branch. Remove autoconf, add m4.
Update rust and cargo to 1.51. Use `rust-cbindgen-0.19`.
 2021-12-01 22:07:00 +01:00
Jonathan Brielmaier f1a2e90409
gnu: Add nspr@4.32. 
Required for icecat/icedove 91.

* gnu/packages/nss.scm (nspr-4.32): New variable.
 2021-12-01 22:06:54 +01:00
Nicolas Goaziou d7d7b57965
gnu: emacs-citar: Remove unnecessary input. 
* gnu/packages/emacs-xyz.scm (emacs-citar)[propagated-inputs]: Remove emacs-helm-bibtex.
 2021-12-01 22:00:45 +01:00
Andy Tai 2b08cc968b
gnu: bullet: Update to 3.17. 
* gnu/packages/game-development.scm (bullet): Update to 3.17.
[arguments]<#:configure-flags>: Disable access to third-party libs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 21:54:41 +01:00
Attila Lendvai c7c4f80881
gnu: Update Trezor support. 
* gnu/packages/patches/python-trezor-agent-fix-argv0.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply previous removal.
* gnu/packages/finance.scm (python-trezor-agent): Update to 0.14.4.
[source]: Remove now useless patch.
(python-mnemonic): Update to 0.20.
(python-trezor): Update to 0.12.4
(trezor-agent): Update to 0.11.0-1.
[source]: Add file-name field.
[arguments]: Remove trailing #T in phases.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 18:05:26 +01:00
Attila Lendvai 508200d66a
gnu: python-daemon: Update to 2.3.0. 
* gnu/packages/python-xyz.scm (python-daemon): Update to 2.3.0.
[native-inputs]: Add python-coverage and python-twine.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:58:33 +01:00
Ahmad Jarara 8cc099b425
gnu: openssh: Add support for ecdsa-sk, ed25519-sk ssh keys. 
* gnu/packages/ssh.scm (openssh)[inputs]: Add LIBFIDO2.
[arguments]: Pass "--with-security-key-builtin".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:53:27 +01:00
Ahmad Jarara 3aaef047a6
gnu: Add libfido2. 
* gnu/packages/security-token.scm (libfido2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:53:27 +01:00
Ahmad Jarara 083a710cbb
gnu: Add libcbor. 
* gnu/packages/compression.scm (libcbor): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:53:27 +01:00
Foo Chuan Wei b5d0029771
gnu: Add vim-nerdtree. 
* gnu/packages/vim.scm (vim-nerdtree): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:53:27 +01:00
Attila Lendvai a955e4d7f6
gnu: Add smplayer. 
* gnu/packages/video.scm (smplayer): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:51:38 +01:00
Felix Gruber 5ff34d596d
gnu: Add python-codespell. 
* gnu/packages/python-xyz.scm (python-codespell): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:51:37 +01:00
Josselin Poiret a82e9f45fd
installer: Make LUKS2 the default format for encrypted devices 
* gnu/installer/parted.scm (luks-format-and-open): Change it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:51:37 +01:00
Josselin Poiret adce91a3ec
gnu: system: Add LUKS2 support for the root file system. 
* gnu/bootloader/grub.scm (grub-configuration-file): Add 'insmod
luks2'.
* gnu/system/mapped-devices.scm (open-luks-device): Create
'/run/cryptsetup/' directory.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2021-12-01 17:51:37 +01:00
Guillaume Le Vaillant 1a0696e0a6
gnu: sdrangel: Add missing input. 
QtQuick is required by some runtime features.

* gnu/packages/radio.scm (sdrangel)[inputs]: Add qtquickcontrols2.
 2021-12-01 17:30:45 +01:00
jgart via Guix-patches via e7ead42383
gnu: python-language-server: Add deprecated alias. 
* gnu/packages/python-xyz.scm (python-language-server): New variable.

Add deprecated alias for package removed in the parent commit.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:13:41 +01:00
jgart via Guix-patches via 7907ddbc3a
gnu: Add python-lsp-server. 
* gnu/packages/python-xyz.scm (python-language-server): Delete variable.
* gnu/packages/python-xyz.scm (python-lsp-server): New variable.

Removes deprecated python-language-server package and adds maintained
fork.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:13:27 +01:00
jgart via Guix-patches via 0c3acb247a
gnu: python-lsp-jsonrpc: Add deprecated alias. 
* gnu/packages/python-xyz.scm (python-jsonrpc-server): New variable.

Add deprecated alias for package removed in the parent commit.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:13:10 +01:00
jgart via Guix-patches via 869c7d6703
gnu: Add python-lsp-jsonrpc. 
* gnu/packages/python-xyz.scm (python-jsonrpc-server): Delete variable.
* gnu/packages/python-xyz.scm (python-lsp-jsonrpc): New variable.

Removes deprecated python-jsonrpc-server package and adds maintained
fork.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:12:58 +01:00
jgart 46e030764d
gnu: python-jedi: Update to 0.18.1. 
* gnu/packages/python-xyz.scm (python-jedi): Update to 0.18.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:12:31 +01:00
jgart via Guix-patches via 6b29c3c735
gnu: python2-jedi: Remove package. 
* gnu/packages/python-xyz.scm (python2-jedi): Delete variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:10:34 +01:00
jgart via Guix-patches via c56e9033f5
gnu: python-parso: Update to 0.8.2. 
* gnu/packages/python-xyz.scm (python-parso): Update to 0.8.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 17:10:18 +01:00
raingloom d9956e9383
gnu: yggdrasil: Update to 0.4.1. 
* gnu/packages/networking.scm (yggdrasil): Update to 0.4.1.
* gnu/packages/patches/yggdrasil-extra-config.patch: Update for new version.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom f3b2af2147
gnu: yggdrasil: Update to 0.4.0. 
* gnu/packages/patches/yggdrasil-extra-config.patch: Update patch.
* gnu/packages/networking.scm (yggdrasil): Update to 0.4.0.
[arguments]: Also install genkeys.
[propagated-inputs]: Remove go-github-com-cheggaaa-pb; add go-golang-org-x-sys,
go-github-com-mattn-go-runewidth, go-github-com-mattn-go-isatty,
go-github-com-fatih-color, go-github-com-cheggaaa-pb-v3,
go-github-com-vividcortex-ewma, and go-github-com-arceliar-ironwood.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom dee3e337b6
gnu: Add go-github-com-arceliar-ironwood. 
* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom 7e4b418733
gnu: Rename go-github-com-cheggaaa-pb to go-github-com-cheggaaa-pb-v3. 
* gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Rename this variable...
(go-github-com-cheggaaa-pb-v3): ...to this variable.
(go-github-com-cheggaaa-pb): New variable for deprecated package.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom b7e774a828
gnu: go-github-com-cheggaaa-pb: Update to 3.0.8. 
* gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Update to 3.0.8.
[arguments]: Disable tests; update import path.
[native-inputs]: Move go-github-com-mattn-go-isatty from here...
[propagated-inputs]: ...to here; add go-github-com-vividcortex-ewma and
go-github-com-rivo-uniseg.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom 660062a65b
gnu: Add go-github-com-mattn-go-runewidth. 
* gnu/packages/golang.scm (go-github-com-mattn-go-runewidth): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom f3861469b6
gnu: Add go-github-com-rivo-uniseg. 
* gnu/packages/golang.scm (go-github-com-rivo-uniseg): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
raingloom b3a9d079b8
gnu: Add go-github-com-vividcortex-ewma. 
* gnu/packages/golang.scm (go-github-com-vividcortex-ewma): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 17:03:34 +01:00
ZmnSCPxj via Guix-patches via 5ca0042116
gnu: Add python-mrkd. 
* gnu/packages/python-xyz.scm (python-mrkd): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 16:40:49 +01:00
cage 0a9edd23ca
gnu: telescope: Update to 0.6.1. 
* gnu/packages/web-browsers.scm (telescope): Update to 0.6.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-12-01 16:36:39 +01:00
cage 8e7e839c98
gnu: cl-unix-opts: Update to 0.1.7-1.0e61f34. 
* gnu/packages/lisp-xyz.scm (sbcl-unix-opts): Update to 0.1.7-1.0e61f34.
  [source]: Fetch using commit instead of old tag.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 13:26:29 +01:00
cage 0da9ae01a8
gnu: cl-croatoan: Update to 0.0.1-4.cf87513. 
* gnu/packages/lisp-xyz.scm (sbcl-croatoan): Update to 0.0.1-4.cf87513.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 13:16:01 +01:00
jgart dc438820c3
gnu: Add julia-millboard. 
* gnu/packages/julia-xyz.scm (julia-millboard): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 14:08:46 +02:00
jgart f303eaa31b
gnu: Add julia-jive. 
* gnu/packages/julia-xyz.scm (julia-jive): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 14:08:46 +02:00
jgart 2eca48e310
gnu: Add julia-softglobalscope. 
* gnu/packages/julay-xyz.scm (julia-softglobalscope): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 14:08:46 +02:00
Giacomo Leidi ce6ea46d40
gnu: Add dynaconf. 
* gnu/packages/python-xyz.scm (dynaconf): New variable.
* gnu/packages/patches/dynaconf-Unvendor-dependencies.patch: New file.
* local.mk (dist_patch_DATA): Register it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 13:58:07 +02:00
Giacomo Leidi f8b1215874
gnu: Add python-dotenv-0.13.0. 
* gnu/packages/python-xyz.scm (python-dotenv-0.13.0): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 13:58:04 +02:00
Efraim Flashner 1e8ad167f6
gnu: python-dotenv: Run test suite. 
* gnu/packages/python-xyz.scm (python-dotenv)[arguments]: Add custom
'check phase.
 2021-12-01 13:58:04 +02:00
Giacomo Leidi a8d62aea22
gnu: Add python-dotenv. 
* gnu/packages/python-xyz.scm (python-dotenv): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-12-01 13:57:59 +02:00
Ricardo Wurmus 124d76c5c2
gnu: python2-numpydoc: Update to 0.9.1. 
* gnu/packages/python-xyz.scm (python2-numpydoc): Update to 0.9.1; do not
inherit from Python 3 variant.
 2021-12-01 11:39:58 +01:00
Ricardo Wurmus 38d648655b
gnu: python-numpydoc: Update to 1.1.0. 
* gnu/packages/python-xyz.scm (python-numpydoc): Update to 1.1.0.
[arguments]: Override 'check phase to run tests.
[native-inputs]: Remove python-nose; add python-matplotlib, python-pytest, and
python-pytest-cov.
 2021-12-01 11:39:58 +01:00
Alice BRENON 6367c92c6e
gnu: Add python-mwparserfromhell. 
* gnu/packages/python-web.scm (python-mwparserfromhell): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 11:22:42 +01:00
Efraim Flashner 619e0627a6
gnu: ruby-mocha: Update to 1.13.0. 
* gnu/packages/ruby.scm (ruby-mocha): Update to 1.13.0.
[home-page]: Update to new location.
 2021-12-01 11:39:14 +02:00
Charles f11605d96d
gnu: cl-yxorp: Update to 0.4. 
* gnu/packages/lisp-xyz.scm (sbcl-yxorp): Update to 0.4.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 09:44:03 +01:00
Sharlatan Hellseher 4beb013c84
gnu: Add cl-liballegro. 
* gnu/packages/lisp-xyz.scm: (sbcl-cl-liballegro, ecl-cl-liballegro,
  cl-liballegro): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-12-01 09:44:03 +01:00
Nicolas Vallet d7477f09c3
gnu: Add r-phyloseq. 
* gnu/packages/cran.scm (r-phyloseq): New variable

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-12-01 09:29:26 +01:00
Ricardo Wurmus 3411f8d512
gnu: Add r-fmcsr. 
* gnu/packages/bioconductor.scm (r-fmcsr): New variable.
 2021-11-30 22:48:07 +01:00
Ricardo Wurmus e4e50229f1
gnu: python-cloudscraper: Update to 1.2.58. 
* gnu/packages/python-web.scm (python-cloudscraper): Update to 1.2.58.
[source]: Do not delete as many files in snippet; fetch sources via git.
[arguments]: Add build phase 'fix-references; replace 'check phase.
[inputs]: Add node.
[propagated-inputs]: Add python-js2py, python-polling2, and python-responses.
 2021-11-30 20:49:18 +01:00
Ricardo Wurmus 3b74b41498
gnu: Add python-polling2. 
* gnu/packages/python-xyz.scm (python-polling2): New variable.
 2021-11-30 20:49:10 +01:00
Ricardo Wurmus 1a13968210
gnu: Add python-js2py. 
* gnu/packages/python-web.scm (python-js2py): New variable.
 2021-11-30 20:48:34 +01:00
Ricardo Wurmus e35cfeb253
gnu: Add python-pyjsparser. 
* gnu/packages/python-web.scm (python-pyjsparser): New variable.
 2021-11-30 20:48:22 +01:00
Ricardo Wurmus 53a16a2143
gnu: Add r-seuratdata. 
* gnu/packages/cran.scm (r-seuratdata): New variable.
 2021-11-30 20:30:02 +01:00
Ricardo Wurmus 79bc812357
gnu: guile-wisp: Update to 1.0.6. 
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.6.
 2021-11-30 20:30:02 +01:00
Ricardo Wurmus f7db3bf277
gnu: guile-wisp: Remove trailing #T. 
* gnu/packages/guile-xyz.scm (guile-wisp)[arguments]: Remove trailing #T.
 2021-11-30 20:30:02 +01:00
Nicolas Goaziou a47dfd0e7f
gnu: emacs-fountain-mode: Update to 3.6.0. 
* gnu/packages/emacs-xyz.scm (emacs-fountain-mode): Update to 3.6.0.
 2021-11-30 19:59:57 +01:00
Nicolas Goaziou 2ac171867a
gnu: emacs-tramp: Update to 2.5.1.5. 
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.1.5.
 2021-11-30 19:56:16 +01:00
Hong.Li@mdc-berlin.de 5bdf1b6551
gnu: Add r-rbokeh. 
* gnu/packages/cran.scm (r-rbokeh): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-30 16:46:18 +01:00
Hong.Li@mdc-berlin.de 21bf500ee9
gnu: Add r-gistr. 
* gnu/packages/cran.scm (r-gistr): New variable.
 2021-11-30 16:46:18 +01:00
Hong Li 78f2fe7da8
gnu: r-crul: Update to 1.2.0. 
* gnu/packages/cran.scm (r-crul): Update to 1.2.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-30 16:46:17 +01:00
Ricardo Wurmus 16d7f26fed
gnu: Add python-woob. 
* gnu/packages/python-web.scm (python-woob): New variable.
 2021-11-30 16:46:17 +01:00
Ricardo Wurmus bfaf7b559e
gnu: Add python-xunitparser. 
* gnu/packages/python-check.scm (python-xunitparser): New variable.
 2021-11-30 16:46:17 +01:00
Ricardo Wurmus 173a2998d9
gnu: r-umi4cpackage: Embed references to perl and bowtie2. 
* gnu/packages/bioinformatics.scm (r-umi4cpackage)[arguments]: Add build
phases to patch calls of bowtie2 and perl.
[inputs]: Add perl and bowtie.
[synopsis]: Remove trailing period.
 2021-11-30 16:46:17 +01:00
Julien Lepiller d95a982cdd
gnu: coq: Update to 8.14.0. 
* gnu/packages/coq.scm (coq): Update to 8.14.0.
(coq-bignums): Update to 8.14.0.
(coq-equations): Update to 1.3.
* gnu/packages/patches/coq-fix-envvars.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-11-30 03:52:00 +01:00
Julien Lepiller 189501bf3b
gnu: proof-general: Update to latest commit. 
* gnu/packages/coq.scm (proof-general): Update to latest commit.
[license]: Change to glp3+.
 2021-11-30 03:19:33 +01:00
Julien Lepiller bcd4c7ae6a
gnu: coq-semantics: Update to 8.14.0. 
* gnu/packages/coq.scm (coq-semantics): Update to 8.14.0.
 2021-11-30 03:19:21 +01:00
Tobias Geerinckx-Rice 892f1b7273
services: Accept <inferior-package>s in lieu of <package>s. 
* gnu/services/authentication.scm (fprintd-configuration)
(nslcd-configuration): Substitute file-like objects for package ones.
* gnu/services/cgit.scm (cgit-configuration, opaque-cgit-configuration):
Likewise.
* gnu/services/cups.scm (package-list?, cups-configuration): Likewise.
* gnu/services/dns.scm (verify-knot-configuration)
(ddclient-configuration): Likewise.
* gnu/services/docker.scm (docker-configuration): Likewise.
* gnu/services/file-sharing.scm (transmission-daemon-configuration): Likewise.
* gnu/services/getmail.scm (getmail-configuration): Likewise.
* gnu/services/mail.scm (dovecot-configuration)
(opaque-dovecot-configuration): Likewise.
* gnu/services/messaging.scm (prosody-configuration)
(opaque-prosody-configuration): Likewise.
* gnu/services/monitoring.scm (zabbix-server-configuration)
(zabbix-agent-configuration): Likewise.
* gnu/services/networking.scm (opendht-configuration): Likewise.
* gnu/services/pm.scm (tlp-configuration): Likewise.
* gnu/services/telephony.scm (jami-configuration): Likewise.
* gnu/services/virtualization.scm (libvirt-configuration)
(qemu-guest-agent-configuration): Likewise.
* gnu/services/vpn.scm (openvpn-client-configuration): Likewise.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice dc9be12eaf
gnu: squashfs-tools: Update to 4.5. 
* gnu/packages/compression.scm (squashfs-tools): Update to 4.5.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice cdf7b3daa3
gnu: toybox: Update to 0.8.5. 
* gnu/packages/busybox.scm (toybox): Update to 0.8.5.
[arguments]: Add a new 'fix-or-skip-broken-tests phase.
Don't explicitly return #t from the other phases.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice a392ad8302
gnu: indi: Update to 1.9.3. 
* gnu/packages/astronomy.scm (indi): Update to 1.9.3.
 2021-11-30 01:08:55 +01:00
Tobias Geerinckx-Rice 4c62406371
gnu: simdjson: Update to 1.0.2. 
* gnu/packages/cpp.scm (simdjson): Update to 1.0.2.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice c6a15cf756
gnu: diffoscope: Update to 194. 
* gnu/packages/diffoscope.scm (diffoscope): Update to 194.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice 588698c92b
gnu: lttoolbox: Omit static libraries. 
* gnu/packages/dictionaries.scm (lttoolbox)[arguments]:
Add "--disable-static" to #:configure-flags.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice d51c5d032e
gnu: lttoolbox: Update to 3.5.4. 
* gnu/packages/dictionaries.scm (lttoolbox): Update to 3.5.4.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice 795e8c7a7c
gnu: quazip@1: Update to 1.2. 
* gnu/packages/compression.scm (quazip): Update to 1.2.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice 26787a7034
gnu: thefuck: Update to 3.31. 
* gnu/packages/admin.scm (thefuck): Update to 3.31.
[arguments]: Don't call buggy settings.init() during test suite.
 2021-11-30 01:08:54 +01:00
Tobias Geerinckx-Rice 3848dafeb1
gnu: xa: Update to 2.3.12. 
* gnu/packages/assembly.scm (xa): Update to 2.3.12.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice 39631cefa8
gnu: rxvt-unicode: Update to 9.30. 
* gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.30.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice eb62e3e54d
gnu: ethtool: Update to 5.15. 
* gnu/packages/networking.scm (ethtool): Update to 5.15.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice 01f08d5f82
gnu: btrfs-progs: Update to 5.15.1. 
* gnu/packages/linux.scm (btrfs-progs): Update to 5.15.1.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice 1e9d70e42e
gnu: powerstat: Update to 0.02.27. 
* gnu/packages/linux.scm (powerstat): Update to 0.02.27.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice c1546d8a68
gnu: powerstat: Fetch sources from Git. 
* gnu/packages/linux.scm (powerstat)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice 2397cc097c
gnu: usbutils: Update to 014. 
* gnu/packages/linux.scm (usbutils): Update to 014.
[arguments]: Remove obsolete autogen.sh substitution.
Don't explicitly return #t from phases.
 2021-11-30 01:08:53 +01:00
Tobias Geerinckx-Rice 215524a116
gnu: xfsprogs: Omit static library. 
* gnu/packages/linux.scm (xfsprogs)[arguments]:
Add "--disable-static" to #:configure-flags.
(xfsprogs-static)[arguments]: Undo it.
 2021-11-30 01:08:52 +01:00
Tobias Geerinckx-Rice 3ec27a7436
gnu: xfsprogs: Update to 5.14.0. 
* gnu/packages/linux.scm (xfsprogs): Update to 5.14.0.
[inputs]: Add liburcu.
 2021-11-30 01:08:52 +01:00
Tobias Geerinckx-Rice 72c3763653
gnu: kexec-tools: Update to 2.0.23. 
* gnu/packages/linux.scm (kexec-tools): Update to 2.0.23.
 2021-11-30 01:08:52 +01:00
Petr Hodina 7e3151c19e
gnu: Add inkbox. 
* gnu/packages/qt.scm (inkbox): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-29 22:18:30 +01:00
Christopher Baines daa6c67fb4
gnu: guix-build-coordinator: Update to 0-40.226ec0f. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-40.226ec0f.
* doc/guix.texi (Guix Build Coordinator): Remove note about the service being
considered experimental, it's been stable for a while now.
 2021-11-29 21:01:26 +00:00
jgart 653bcab96d
gnu: Add python-pysox. 
* gnu/packages/audio.scm (python-pysox): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2021-11-29 21:34:24 +05:30
Artyom V. Poptsov 4883d7fe9e
gnu: guile-gitlab: Update to 0.2.1. 
* gnu/packages/guile-xyz.scm (guile-gitlab): Update to 0.2.1.
[inputs]: Use guile2.2-json instead of guile-json-1.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-11-28 22:35:37 +01:00
Nicolas Goaziou 8351f6c570
gnu: emacs-org: Update to 9.5.1. 
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.5.1.
 2021-11-28 22:05:57 +01:00
Morgan Smith 5ee135df5f
gnu: emacs-org: Don't use release tar. 
* gnu/packages/emacs-xyz.scm (emacs-org):
[source]: Use git repository.
[arguments]: Add phases to help with building.
[native-inputs]: Add texinfo.
 2021-11-28 21:54:02 +01:00
Attila Lendvai b8abc6c88a
gnu: trezord: Update to 2.0.31. 
* gnu/packages/finance.scm (trezord): Update to 2.0.31.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:09 +01:00
Attila Lendvai d3448fafea
gnu: trezor-agent: Update to 0.11.0. 
* gnu/packages/finance.scm (trezor-agent): Update to 0.11.0.
[source]: Use GitHub repository.
[native-inputs]: Remove python-hidapi.  Add python-attrs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:09 +01:00
Attila Lendvai 857098830b
gnu: python-trezor: Update to 0.12.3. 
* gnu/packages/finance.scm (python-trezor): Update to 0.12.3.
[source]: Use GitHub repository.
[propagated-inputs]: Add python-attrs.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:08 +01:00
Attila Lendvai bf90403f42
gnu: python-trezor-agent: Update to 0.14.2. 
* gnu/packages/finance.scm (python-trezor-agent): Update to 0.14.2.
[propagated-inputs]: Add python-pynacl, python-hidapi.  Remove python-ed25519.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:08 +01:00
Attila Lendvai 25cb5bad5e
gnu: python-trezor-agent: Fix key generation with trezor-gpg init 
* gnu/packages/finance.scm (trezor-agent): Add comment on why the
undoing of the wrapping is done, and also delete the irrelevant sideffect of
the now undone wrapping.
(python-trezor-agent): Add a patch that changes the python code to handle the
argv[0] changed by the wrapping.
* gnu/packages/patches/trezor-agent-fix-argv0.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-28 21:31:08 +01:00
Efraim Flashner 032d1c03b6
gnu: ruby-parallel: Update to 1.21.0. 
* gnu/packages/ruby.scm (ruby-parallel): Update to 1.21.0.
 2021-11-28 21:28:19 +02:00
Efraim Flashner 3401d0a7d4
gnu: ruby-minitest-hooks: Update to 1.5.0. 
* gnu/packages/ruby.scm (ruby-minitest-hooks): Update to 1.5.0.
 2021-11-28 21:28:19 +02:00
Efraim Flashner 3ffe6937bc
gnu: perl-test-mockmodule: Update to 0.177.0. 
* gnu/packages/perl-check.scm (perl-test-mockmodule): Update to 0.177.0.
 2021-11-28 21:28:19 +02:00
Efraim Flashner 2d332ba5ed
gnu: php: Remove extra glibc input. 
* gnu/packages/php.scm (php)[arguments]: Use build-system's libc for
gettext.
[inputs]: Remove glibc.
 2021-11-28 21:28:18 +02:00
Efraim Flashner e8bc37945f
gnu: php: Update to 7.4.26. 
* gnu/packages/php.scm (php): Update to 7.4.26.
 2021-11-28 21:28:18 +02:00
Efraim Flashner a2da8c1805
gnu: perl-sub-exporter: Update to 0.988. 
* gnu/packages/perl.scm (perl-sub-exporter): Update to 0.988.
 2021-11-28 21:28:18 +02:00
Efraim Flashner 915800fb9d
gnu: ruby-oj: Update to 3.13.9. 
* gnu/packages/ruby.scm (ruby-oj): Update to 3.13.9.
 2021-11-28 21:28:18 +02:00
Efraim Flashner 795786407c
gnu: perl-scalar-list-utils: Update to 1.60. 
* gnu/packages/perl.scm (perl-scalar-list-utils): Update to 1.60.
 2021-11-28 21:28:18 +02:00
Nicolas Goaziou 39f9b2804a
gnu: cataclysm-dda: Update to 0.F-3. 
* gnu/packages/games.scm (cataclysm-dda): Update to 0.F-3.
 2021-11-28 14:15:21 +01:00
Artyom V. Poptsov a035256250
gnu: Add guile-gitlab. 
* gnu/packages/guile-xyz.scm (guile-gitlab): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2021-11-28 10:58:38 +01:00
Efraim Flashner 460a38976a
gnu: uncrustify: Update to 0.74.0. 
* gnu/packages/code.scm (uncrustify): Update to 0.74.0.
[native-inputs]: Remove unzip.
 2021-11-28 09:18:29 +02:00
Tobias Geerinckx-Rice f43a783871
gnu: clustershell: Update to 1.8.4. 
* gnu/packages/ssh.scm (clustershell): Update to 1.8.4.
[arguments]: Don't explicitly return #t from phases.
 2021-11-28 04:16:35 +01:00
Tobias Geerinckx-Rice 511a8f8d46
gnu: clustershell: Fetch sources from Git. 
* gnu/packages/ssh.scm (clustershell)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2021-11-28 04:16:35 +01:00
Tobias Geerinckx-Rice 42c4acf026
gnu: perl-lingua-en-findnumber: Fix typo in synopsis. 
* gnu/packages/language.scm (perl-lingua-en-findnumber)[synopsis]:
Delete trailing space.
 2021-11-28 04:16:35 +01:00
Tobias Geerinckx-Rice 1586544611
gnu: libx86emu: Update to 3.5. 
* gnu/packages/virtualization.scm (libx86emu): Update to 3.5.
[source]: Move hash above snippet.
 2021-11-28 04:16:35 +01:00
Tobias Geerinckx-Rice c74f7d2571
gnu: ddcci-driver-linux: Build with Linux-Libre 5.15. 
* gnu/packages/linux.scm (ddcci-driver-linux): Update to 0.4.1-0.bf9d798.
 2021-11-28 04:16:34 +01:00
Tobias Geerinckx-Rice 513dbc2ece
gnu: ddcci-driver-linux: Update to 0.4.1. 
* gnu/packages/linux.scm (ddcci-driver-linux): Update to 0.4.1.
[arguments]: Don't explicitly return #t from phases.
 2021-11-28 04:16:34 +01:00
Nicolas Goaziou d495a902b2
gnu: emacs-corfu: Update to 0.16. 
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.16.
 2021-11-27 23:37:11 +01:00
Tobias Geerinckx-Rice ea50a47511
gnu: sakura: Update to 3.8.4. 
* gnu/packages/terminals.scm (sakura): Update to 3.8.4.
 2021-11-27 16:35:54 +01:00
Tobias Geerinckx-Rice ef7bdf93d2
gnu: you-get: Update to 0.4.1555. 
* gnu/packages/video.scm (you-get): Update to 0.4.1555.
[arguments]: Don't explicitly return #t from phases.
 2021-11-27 16:35:54 +01:00
Tobias Geerinckx-Rice 95cea73e7c
gnu: strongswan: Update to 5.9.4. 
* gnu/packages/vpn.scm (strongswan): Update to 5.9.4.
[arguments]: Don't explicitly return #t from phases.
[license]: Fix typo.
 2021-11-27 16:35:53 +01:00
Tobias Geerinckx-Rice 58e7d1282a
gnu: varnish: Update to 7.0.1. 
* gnu/packages/web.scm (varnish): Update to 7.0.1.
 2021-11-27 16:35:53 +01:00
Tobias Geerinckx-Rice f37e266fa8
gnu: rxvt-unicode: Update to 9.29. 
* gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.29.
[arguments]: Don't explicitly return #t from phases.
[inputs]: Add libptytty.
 2021-11-27 16:35:53 +01:00
Tobias Geerinckx-Rice d171b881bd
gnu: Add libptytty. 
* gnu/packages/terminals.scm (libptytty): New public variable.
 2021-11-27 16:35:53 +01:00
Tobias Geerinckx-Rice 162e8ea5fc
gnu: squid: Update to 4.17. 
* gnu/packages/networking.scm (squid): Update to 4.17.
 2021-11-27 16:24:01 +01:00
Tobias Geerinckx-Rice b2af054ca1
gnu: xterm: Update to 370. 
* gnu/packages/xorg.scm (xterm): Update to 370.
 2021-11-27 16:24:01 +01:00
Pierre Langlois bf1e46e959
gnu: u-boot: Fix rk3399 boot from emmc. 
* gnu/packages/bootloaders.scm (%u-boot-rk3399-enable-emmc-phy-patch): New
variable.
(u-boot)[origin]: Register it.
* gnu/packages/patches/u-boot-rk3399-enable-emmc-phy.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2021-11-27 15:03:33 +00:00
Raghav Gururajan 96a6084cd8
gnu: pipe-viewer: Correct references to yt-dlp program. 
* gnu/packages/video.scm (pipe-viewer)[inputs]: Add yt-dlp.
[phases](patch-source): Modify.
 2021-11-27 05:28:28 -05:00
Alex Kost 6dc682e5b9
gnu: guile-xosd: Update to 0.2.2. 
* gnu/packages/guile-xyz.scm (guile-xosd): Update to 0.2.2.
[arguments]: Add 'set-cpath' phase.
[inputs]: Use guile-3.0 as "guile".
 2021-11-27 13:06:10 +03:00
Alex Kost ccaad93d6f
gnu: guile-daemon: Build with Guile 3.0. 
* gnu/packages/guile-xyz.scm (guile-daemon)[inputs]: Use guile-3.0 as "guile".
 2021-11-27 13:06:10 +03:00
Charles ca6135b4b6
gnu: cl-yxorp: Update to 0.3. 
* gnu/packages/lisp-xyz.scm (sbcl-yxorp): Update to 0.3.
  [inputs]: Add chipz, chunga and salza2.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2021-11-27 11:02:24 +01:00
Mădălin Ionel Patrașcu 60abbbf8c5
gnu: Add r-xmapbridge. 
* gnu/packages/bioconductor.scm (r-xmapbridge): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-27 10:46:01 +01:00
Mădălin Ionel Patrașcu aa2aaa65ce
gnu: Add r-xina. 
* gnu/packages/bioconductor.scm (r-xina): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-27 10:36:27 +01:00
Mădălin Ionel Patrașcu c96d8ce720
gnu: Add r-stringdb. 
* gnu/packages/bioconductor.scm (r-stringdb): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-27 10:36:27 +01:00
Mădălin Ionel Patrașcu fefdea2a1a
gnu: Add r-alluvial. 
* gnu/packages/cran.scm (r-alluvial): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2021-11-27 10:36:27 +01:00
Tanguy Le Carrour 214b3c52ce
gnu: alot: Update to 0.10. 
* gnu/packages/mail.scm (alot): Update to 0.10.
[inputs]: Use python-notmuch2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-27 10:02:11 +01:00
Tanguy Le Carrour 4be46b231f
gnu: Add python-notmuch2. 
* gnu/packages/mail.scm (python-notmuch2): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-27 10:01:45 +01:00
Tanguy Le Carrour 7aff105123
gnu: notmuch: Update to 0.34.1. 
* gnu/packages/mail.scm (notmuch): Update to 0.34.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-27 10:01:34 +01:00
Tanguy Le Carrour e5a1d30678
gnu: python-urwidtrees: Update to 1.0.3. 
* gnu/packages/python-xyz.scm (python-urwidtrees): Update to 1.0.3.
[arguments]: Use setuptools.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-11-27 10:01:18 +01:00