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Author SHA1 Message Date
Ricardo Wurmus d297d24edb
gnu: r-biobtreer: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.12.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus 1ff662c8e2
gnu: r-bgeedb: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.26.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus 189f9d805e
gnu: r-bgeecall: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.16.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus 4dd9fdb68f
gnu: r-beclear: Update to 2.16.0. 
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.16.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus 0d879deae1
gnu: r-megadepth: Update to 1.9.0. 
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.9.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus c09a9bc427
gnu: r-ballgown: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.32.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus e5e7089db5
gnu: r-guitar: Update to 2.16.0. 
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.16.0.
 2023-04-29 20:28:07 +02:00
Ricardo Wurmus 3616dd923f
gnu: r-chromstar: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.26.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 1b3be92024
gnu: r-snpstats: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.50.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 72288df46a
gnu: r-snapcgh: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-snapcgh): Update to 1.70.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 61432d53ff
gnu: r-pathview: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.40.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus ef6059cf27
gnu: r-ldblock: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.30.0.
[propagated-inputs]: Remove r-ensdb-hsapiens-v75, r-ensembldb, r-genomeinfodb,
r-genomicfiles, r-rsamtools, r-snpstats, and r-variantannotation; add
r-rlang.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus c00d4a394d
gnu: r-kegggraph: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.60.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 70514e0281
gnu: r-gwascat: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.32.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus e8a52e54f7
gnu: r-gviz: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 311339801e
gnu: r-ggbio: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.48.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 764220f848
gnu: r-erma: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-erma): Update to 1.16.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus bc7db31ceb
gnu: r-catalyst: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.24.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus d1e16723dd
gnu: r-msmstests: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.38.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 0d854ac754
gnu: r-msmseda: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.38.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus bca0afda01
gnu: r-biocio: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.10.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 6459537f90
gnu: r-msfeatures: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.8.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus f4c4bc5473
gnu: r-mscoreutils: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.12.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 643e63ef61
gnu: r-delayedmatrixstats: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 4b4df8d533
gnu: r-sparsematrixstats: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.12.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 1435a289dd
gnu: r-scran: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.28.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus c3056799b3
gnu: r-scater: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-scater): Update to 1.28.0.
[propagated-inputs]: Remove r-gridextra; add r-densvis.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus febe8360c3
gnu: r-scuttle: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.10.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 8dc03857a6
gnu: r-singler: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-singler): Update to 2.2.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus b0a6411b85
gnu: r-singlecellexperiment: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.22.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 09ada1eb1e
gnu: r-chromvar: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.22.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 0609a92c0b
gnu: r-motifmatchr: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.22.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 6263d39069
gnu: r-maftools: Update to 2.16.0. 
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.16.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 99c001303d
gnu: r-tfbstools: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.38.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus 5ab3d66ffc
gnu: r-cner: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-cner): Update to 1.36.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus b9b6c29a75
gnu: r-beadarraysnp: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-beadarraysnp): Update to 1.66.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus e76467b72c
gnu: r-beachmat: Update to 2.16.0. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.16.0.
 2023-04-29 20:28:06 +02:00
Ricardo Wurmus f482bb1256
gnu: r-rhdf5lib: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.22.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 582dac2949
gnu: r-hdf5array: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.28.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 143b70c92b
gnu: r-hitc: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.44.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 765b41564a
gnu: r-fithic: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.26.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 8866d47bce
gnu: r-fishpond: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-fishpond): Update to 2.6.0.
[inputs]: Remove zlib.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 85bc989a66
gnu: r-rgraphviz: Update to 2.44.0. 
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.44.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 2e81140c18
gnu: r-s4vectors: Update to 0.38.0. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.0.
[native-inputs]: Add r-knitr.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus ed6d919ef0
gnu: r-preprocesscore: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.62.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus ae8956bbc8
gnu: r-icens: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-icens): Update to 1.72.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus ebd0bdd84c
gnu: r-m3c: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.22.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus aff09ecb05
gnu: r-rgreat: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.2.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus bd1b41e8d1
gnu: r-pcatools: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.12.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus f2ce4a037f
gnu: r-biodist: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.72.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 2f1c5f361f
gnu: r-biocworkflowtools: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.26.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 37de521f22
gnu: r-biocset: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.14.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 72ba2d8f48
gnu: r-biocpkgtools: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.18.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 8f9bd84fd9
gnu: r-biocor: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.24.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus d63b92465b
gnu: r-bioconcotk: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.20.0.
[propagated-inputs]: Add r-mass.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 94ab8db2d7
gnu: r-multiassayexperiment: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.26.0.
[native-inputs]: Add r-r-rsp.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 621526d5e3
gnu: r-grohmm: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.34.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 29f1477229
gnu: r-experimenthub: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.8.0.
[propagated-inputs]: Remove r-curl.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus d0682c7c04
gnu: r-biocviews: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 0c2009a1b0
gnu: r-biocstyle: Update to 2.28.0. 
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.28.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus d277f69643
gnu: r-biocgraph: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.62.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus b5133a0dc3
gnu: r-bioccheck: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.36.0.
[propagated-inputs]: Add r-biocfilecache.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 81de52f013
gnu: r-biocbaseutils: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-biocbaseutils): Update to 1.2.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 39defa2968
gnu: r-ebarrays: Update to 2.64.0. 
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.64.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus f7e7bb2007
gnu: r-reactomepa: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.44.0.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus 2474b005cd
gnu: r-graphite: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.46.0.
[native-inputs]: Add r-r-rsp.
 2023-04-29 20:28:05 +02:00
Ricardo Wurmus b6350013f8
gnu: r-biobroom: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.32.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9adef62a5b
gnu: r-bioassayr: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.38.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 29944820e1
gnu: r-fmcsr: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-fmcsr): Update to 1.42.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 89fce342bb
gnu: r-chemminer: Update to 3.52.0. 
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.52.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 02451fb098
gnu: r-bigpint: Update to 1.15.0. 
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.15.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus d3f1ba4bf2
gnu: r-biggr: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus c0b7b4ed00
gnu: r-hyperdraw: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.52.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 7f03f14e5f
gnu: r-hypergraph: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.72.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus c6354be8c6
gnu: r-rsbml: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.58.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 7d2852ed0e
gnu: r-bifet: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.20.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus f273e6f729
gnu: r-bicare: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.58.0.
[propagated-inputs]: Add r-go-db.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 807271f5b5
gnu: r-bhc: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.52.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 90fc4b4a51
gnu: r-bgx: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.66.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus ee4f843e46
gnu: r-bgmix: Update to 1.59.0. 
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.59.0.
[arguments]: Add build phase 'avoid-naming-conflict.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus e8d5475045
gnu: r-acde: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-acde): Update to 1.30.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 89a1bc74ce
gnu: r-acme: Update to 2.56.0. 
* gnu/packages/bioconductor.scm (r-acme): Update to 2.56.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus f09fd77618
gnu: r-acgh: Update to 1.78.0. 
* gnu/packages/bioconductor.scm (r-acgh): Update to 1.78.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9b4ebaec75
gnu: r-ace: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-ace): Update to 1.18.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus b212b9ca62
gnu: r-universalmotif: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.18.0.
[propagated-inputs]: Add r-matrixgenerics.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 47b35d3459
gnu: r-unifiedwmwqpcr: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus f7c2c248d5
gnu: r-htqpcr: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.54.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus b352e03d83
gnu: r-variancepartition: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.30.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus c1b48012e6
gnu: r-variantfiltering: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 9340b270f7
gnu: r-tilingarray: Update to 1.78.0. 
* gnu/packages/bioconductor.scm (r-tilingarray): Update to 1.78.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus d04f67f677
gnu: r-wavcluster: Update to 2.34.0. 
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.34.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 77d55ff8e6
gnu: r-reqon: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.46.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 5d99ad4da4
gnu: r-seqbias: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.48.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 3dd7d3bf9e
gnu: r-bigmelon: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.26.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 2d821f86cb
gnu: r-gdsfmt: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.36.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 217c1275ac
gnu: r-watermelon: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-watermelon): Update to 2.6.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 69ed0c145f
gnu: r-roc: Update to 1.76.0. 
* gnu/packages/bioconductor.scm (r-roc): Update to 1.76.0.
 2023-04-29 20:28:04 +02:00
Ricardo Wurmus 733b8a2e0d
gnu: r-genie3: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.22.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus a6361a752d
gnu: r-circrnaprofiler: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-circrnaprofiler): Update to 1.14.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 52fd33e996
gnu: r-cicero: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.18.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 3481a56a13
gnu: r-chicago: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-chicago): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 44aeef066d
gnu: r-rcistarget: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.20.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus c5aba0be7c
gnu: r-depecher: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.16.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 043d2dd022
gnu: r-mixomics: Update to 6.24.0. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.24.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus afb011a051
gnu: r-flowsom: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-flowsom): Update to 2.8.0.
[propagated-inputs]: Remove r-cytoml, r-flowworkspace, r-ggpointdensity, r-ggrepel,
r-pheatmap, r-rcolorbrewer, and r-scattermore.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 974dba4509
gnu: r-cytoml: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.12.0.
[inputs]: Remove zlib.
[propagated-inputs]: Remove r-base64enc, r-corpcor, r-lattice, r-plyr, r-rcpp,
r-rcpparmadillo, r-rcppparallel, r-runit, and r-xml2; add r-cpp11.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 43b33d7992
gnu: r-opencyto: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus fadfa9cc60
gnu: r-flowstats: Update to 4.12.0. 
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus c31ae38d58
gnu: r-flowworkspace: Update to 4.12.0. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 2cf5e0cb7a
gnu: r-rprotobuflib: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 9eade45bfb
gnu: r-flowclust: Update to 3.38.0. 
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.38.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus ea4adaa7e8
gnu: r-flowviz: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.64.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus c83337a943
gnu: r-ggcyto: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 557cbfd68c
gnu: r-ncdfflow: Update to 2.46.0. 
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.46.0.
[propagated-inputs]: Remove r-rcpp and r-rcpparmadillo; add r-cpp11.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus e346747a7b
gnu: r-flowmeans: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.60.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 0b653ec7f9
gnu: r-flowcore: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 643bf1a6c7
gnu: r-cytolib: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.12.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus bff572d037
gnu: r-consensusclusterplus: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.64.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 52719d2995
gnu: r-flowai: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-flowai): Update to 1.30.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus f730a027c8
gnu: r-rsubread: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.14.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus ec0fc09a26
gnu: r-annotatr: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.26.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 96ae714e28
gnu: r-biosigner: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus bd322e08de
gnu: r-ropls: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.32.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 74591bcb64
gnu: r-multidataset: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.28.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus addd78c953
gnu: r-birewire: Update to 3.32.0. 
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.32.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 29649ada9e
gnu: r-rqc: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.34.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus 8d3676e217
gnu: r-quasr: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.40.0.
 2023-04-29 20:28:03 +02:00
Ricardo Wurmus b8c4548ac0
gnu: r-rhisat2: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.16.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 3a2a833691
gnu: r-sgseq: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.34.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus e438a5c9d9
gnu: r-rbowtie: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.40.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus c91f3192bc
gnu: r-iclusterplus: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.36.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 277f476f60
gnu: r-biocfilecache: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 2.8.0.
[propagated-inputs]: Remove r-rappdirs.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 2ee15aee56
gnu: r-arrmnormalization: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.40.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 8f88c0243c
gnu: r-progeny: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 0bffa9d7e7
gnu: r-rbowtie2: Update to 2.6.0. 
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 2.6.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 5c7824bffa
gnu: r-zfpkm: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 8f89dba276
gnu: r-zinbwave: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-zinbwave): Update to 1.22.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus f8add36afb
gnu: r-webbioc: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.72.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 58a016c5b2
gnu: r-widgettools: Update to 1.78.0. 
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.78.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus f86f2584f9
gnu: r-wiggleplotr: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.24.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus a8a248b0c8
gnu: r-wrench: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.18.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 1ad2255a5b
gnu: r-wppi: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-wppi): Update to 1.8.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus dd19f928e7
gnu: r-xcms: Update to 3.22.0. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.22.0.
[propagated-inputs]: Add r-multtest.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 48ad54e1c0
gnu: r-massspecwavelet: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.66.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 88acb3def5
gnu: r-roar: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-roar): Update to 1.36.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 4c26b3049a
gnu: r-yarn: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.26.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 041dbd604b
gnu: r-quantro: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.34.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus 48e5c920d2
gnu: r-gcrma: Update to 2.72.0. 
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.72.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus a88af8976b
gnu: r-yapsa: Update to 1.25.0. 
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.25.0.
 2023-04-29 20:28:02 +02:00
Ricardo Wurmus ef2b8e94bf
gnu: r-somaticsignatures: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.36.0.
 2023-04-29 20:28:02 +02:00