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4126 Commits (52312a4551dea1d730720c3ab9424bda9c02319a)

Author SHA1 Message Date
Ricardo Wurmus bb570c1534
gnu: r-ggpicrust2: Update to 1.7.1. 
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.1.
[propagated-inputs]: Remove r-phyloseq; add r-ggh4x.
 2023-07-12 14:29:03 +02:00
Ricardo Wurmus d669b30658
gnu: r-scistreer: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-scistreer): Update to 1.2.0.
 2023-07-12 14:29:03 +02:00
Ricardo Wurmus 5f8104b3a4
gnu: r-numbat: Update to 1.3.2-1. 
* gnu/packages/bioconductor.scm (r-numbat): Update to 1.3.2-1.
 2023-07-12 14:29:03 +02:00
Ricardo Wurmus 347e3b1b75
gnu: r-biomartr: Update to 1.0.4. 
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.4.
 2023-07-12 14:29:03 +02:00
Navid Afkhami 11651fbf7f
gnu: Add r-cellid. 
* gnu/packages/bioconductor.scm (r-cellid): New variable.
 2023-07-03 09:58:57 +02:00
Ricardo Wurmus a8ac423090
gnu: r-ggpicrust2: Update to 1.7.0. 
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.7.0.
[propagated-inputs]: Add r-circlize.
[native-inputs]: Add r-knitr.
 2023-06-03 08:32:01 +02:00
Ricardo Wurmus 41b6f213c1
gnu: r-tcgabiolinks: Update to 2.28.2. 
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.28.2.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus 6d194c1ba8
gnu: r-biocthis: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.10.1.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus 302b916b2b
gnu: r-basilisk-utils: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.12.1.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus 6d54b5cc23
gnu: r-megadepth: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.10.0.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus 0beada7cb0
gnu: r-s4arrays: Update to 1.0.4. 
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.4.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus f06bd3e740
gnu: r-biocviews: Update to 1.68.1. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.68.1.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus 438d2b80f7
gnu: r-rsubread: Update to 2.14.2. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.14.2.
 2023-06-02 12:53:15 +02:00
Ricardo Wurmus 08e1e36942
gnu: r-treeio: Update to 1.24.1. 
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.24.1.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 93350d89a2
gnu: r-apeglm: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.22.1.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus e6faedd0c9
gnu: r-zellkonverter: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.10.1.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 071c31583b
gnu: r-scmap: Update to 1.22.3. 
* gnu/packages/bioconductor.scm (r-scmap): Update to 1.22.3.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 2a35673351
gnu: r-limma: Update to 3.56.1. 
* gnu/packages/bioconductor.scm (r-limma): Update to 3.56.1.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 21342c3bcf
gnu: r-edger: Update to 3.42.4. 
* gnu/packages/bioconductor.scm (r-edger): Update to 3.42.4.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 15ffd4014e
gnu: r-biostrings: Update to 2.68.1. 
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.68.1.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 9e9e21dc46
gnu: r-biocparallel: Update to 1.34.2. 
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.34.2.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 6693480b46
gnu: r-densvis: Update to 1.10.2. 
* gnu/packages/bioconductor.scm (r-densvis): Update to 1.10.2.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 3b20a9e600
gnu: r-delayedarray: Update to 0.26.3. 
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.26.3.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus f947aa3ac9
gnu: r-dearseq: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.12.1.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus ca0c012d4a
gnu: r-bambu: Update to 3.2.3. 
* gnu/packages/bioconductor.scm (r-bambu): Update to 3.2.3.
 2023-06-02 12:53:14 +02:00
Ricardo Wurmus 83bd8d51c3
gnu: r-alpine: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-alpine): Update to 1.26.0.
 2023-06-02 12:53:13 +02:00
Ricardo Wurmus f4639380ae
gnu: r-anvil: Update to 1.12.3. 
* gnu/packages/bioconductor.scm (r-anvil): Update to 1.12.3.
 2023-06-02 12:53:13 +02:00
Ricardo Wurmus 4f7efc8db9
gnu: r-biocviews: Sort inputs. 
* gnu/packages/bioconductor.scm (r-biocviews)[propagated-inputs]: Sort them.
 2023-06-02 12:51:15 +02:00
Ricardo Wurmus 52546a4512
gnu: r-biocparallel: Sort inputs. 
* gnu/packages/bioconductor.scm (r-biocparallel)[propagated-inputs]: Sort
them.
 2023-06-02 12:50:47 +02:00
Ricardo Wurmus 93804e978f
gnu: r-mbecs: Fix indentation. 
* gnu/packages/bioconductor.scm (r-mbecs)[arguments]: Adjust indentation and
spelling of comment.
 2023-06-01 09:21:57 +02:00
Mădălin Ionel Patrașcu 10d3f8aa7b
gnu: Add r-mbecs. 
* gnu/packages/bioconductor.scm (r-mbecs): New variable.
 2023-06-01 09:15:26 +02:00
Ricardo Wurmus aae17d3efa
gnu: r-abn: Update to 2.7-5. 
* gnu/packages/bioconductor.scm (r-abn): Update to 2.7-5.
[native-inputs]: Add r-r-rsp.
 2023-05-31 18:19:53 +02:00
Ricardo Wurmus 85a70cbde6
gnu: r-ggpicrust2: Update to 1.6.5. 
* gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 1.6.5.
 2023-05-31 18:19:53 +02:00
Ricardo Wurmus 9dcb09076d
gnu: r-valr: Update to 0.6.8. 
* gnu/packages/bioconductor.scm (r-valr): Update to 0.6.8.
 2023-05-31 18:19:53 +02:00
Mădălin Ionel Patrașcu 9d05f9a9f5
gnu: Add r-dropletutils. 
* gnu/packages/bioconductor.scm (r-dropletutils): New variable.
 2023-05-12 09:36:26 +02:00
Ricardo Wurmus 7e421c1f5a
gnu: r-scran: Update to 1.28.1. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.28.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 0880f325b7
gnu: r-scuttle: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.10.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 8c7ddd3a44
gnu: r-chromvar: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.22.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus d850b72346
gnu: r-hdf5array: Update to 1.28.1. 
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.28.1.
[propagated-inputs]: Add r-s4arrays.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 3bdd6fb256
gnu: r-s4vectors: Update to 0.38.1. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus da8638facb
gnu: r-preprocesscore: Update to 1.62.1. 
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.62.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 6b2a0aab19
gnu: r-iclusterplus: Update to 1.36.1. 
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.36.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus c96ebf4cf9
gnu: r-clusterprofiler: Update to 4.8.1. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.8.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus f7642f34d0
gnu: r-dose: Update to 3.26.1. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.26.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 4228100215
gnu: r-linnorm: Update to 2.24.1. 
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.24.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus c6c69d4cc6
gnu: r-dnacopy: Update to 1.74.1. 
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.74.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus c846a694a7
gnu: r-scaledmatrix: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-scaledmatrix): Update to 1.8.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 95d5a918a2
gnu: r-glmgampoi: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-glmgampoi): Update to 1.12.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus 75869a8a94
gnu: r-oligo: Update to 1.64.1. 
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.64.1.
 2023-05-09 15:24:15 +02:00
Ricardo Wurmus a4b04c06ab
gnu: r-summarizedexperiment: Update to 1.30.1. 
* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.30.1.
[propagated-inputs]: Add r-s4arrays.
 2023-05-09 15:24:15 +02:00