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Author SHA1 Message Date
Maxim Cournoyer 9b2a3e023f
gnu: mesa: Update to 22.1.7. 
* gnu/packages/gl.scm (mesa): Update to 22.1.7.
[source]: Fix indentation.  Remove patch, implementing it as a...
[configure-flags]: Remove '-Ddri-drivers=...' flag, no longer supported.
[phases]{disable-failing-test} ... substitution instead.
[propagated-inputs]: Move comment above.
[inputs]: Remove extraneous append and sort.
[native-inputs]: Likewise.
[configure-flags]: Break long lines.
* gnu/packages/patches/mesa-skip-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): De-register it.
 2022-08-28 21:07:46 -04:00
Marius Bakke ad384816fe
Merge branch 'staging' into core-updates 2022-08-27 17:10:55 +02:00
Marius Bakke 290ac5cd1e
gnu: polkit: Update to 121. 
* gnu/packages/polkit.scm (polkit-mozjs): Update to 121.
[source](patches): Remove.
[source](snippet): Adjust for build system changes.
[build-system]: Change to MESON-BUILD-SYSTEM.
[inputs]: Replace MOZJS-78 with MOZJS-91.
[native-inputs]: Add GETTEXT-MINIMAL and LIBXML2.
[arguments]: Remove #:phases.  Adjust #:configure-flags for build system
changes.  Use G-expression.
(polkit-duktape)[source]: Remove.
[arguments]: Adjust for build build system changes.
* gnu/packages/patches/polkit-CVE-2021-4034.patch,
gnu/packages/patches/polkit-configure-elogind.patch,
gnu/packages/patches/polkit-use-duktape.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-08-27 01:31:23 +02:00
Marius Bakke 1fd262e8d3
Merge branch 'master' into staging 2022-08-27 00:17:57 +02:00
Vagrant Cascadian f31e55d081
gnu: perl-class-methodmaker: Build reproducibly. 
* gnu/packages/patches/perl-class-methodmaker-reproducible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/perl.scm (perl-class-methodmaker)[source]: Use patch.
 2022-08-19 21:17:12 -07:00
Marius Bakke 7e0116740b
gnu: python-mypy: Update to 0.971. 
* gnu/packages/patches/python-mypy-12332.patch,
gnu/packages/patches/python-mypy-use-sys-path.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-check.scm (python-mypy): Update to 0.971.
[source](patches): Remove.
[arguments]: Skip one test.
 2022-08-16 00:43:43 +02:00
Maxime Devos de29a26008
guile-fibers: Backport the ‘epoll instance is dead’ bugfix. 
This fixes some indeterministic test failures for gnunet-scheme observed while
developing gnunet-scheme.  The following checks were made:

All dependents compile for x86_64:

$ ./pre-inst-env guix build shepherd gnunet-scheme guix-build-coordinator nar-herder guix-data-service guile-fibers --system=x86_64-linux

Everything except guix-build-coordinator (which depends on the
non-cross-compilable sqitch) cross-compile from x86_64 to aarch64-linux-gnu:

$ ./pre-inst-env guix build shepherd gnunet-scheme nar-herder  guile-fibers --system=x86_64-linux --target=aarch64-linux-gnu

I tried testing for reproducibility but the check phase took to long.
However, you can compare the hash you get against the hash I got:

$ ./pre-inst-env guix hash --serializer=nar $(./pre-inst-env guix build guile-fibers --no-grafts --system=x86_64-linux) 0qsaqx27b6q2s22h7y93417ijpkwl6gc1fhhck8aha6bvmawk5h0

I tried an emulated build for another architecture, but there the tests took
overly long.

There were no lint warnings for guile-fibers.

* gnu/packages/patches/guile-fibers-epoll-instance-is-dead.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu/packages/guile-xyz.scm (guile-fibers)[source]{patches}: Use the patch.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-08-15 15:51:27 +02:00
Marius Bakke 431df1214e
gnu: python-dateutil: Adjust tests for Pytest 7. 
* gnu/packages/patches/python-dateutil-pytest-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/time.scm (python-dateutil)[source](patches): New field.
 2022-08-13 12:28:46 +02:00
Marius Bakke 191ff93b31
gnu: Remove gnupg/fixed. 
The replacement was ignored in 77eb3008e3 as the
fix was already present in the current package.

* gnu/packages/patches/gnupg-CVE-2022-34903.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gnupg.scm (gnupg/fixed): Remove variable.
 2022-08-12 00:22:29 +02:00
Marius Bakke 77eb3008e3
Merge branch 'staging' into core-updates 2022-08-11 23:36:10 +02:00
Marius Bakke f7e8be2318
gnu: texinfo: Fix @headings regression. 
* gnu/packages/patches/texinfo-headings-single.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/texinfo.scm (texinfo)[source](patches): New field.
* gnu/packages/commencement.scm (texinfo-boot0)[source]: Use BOOTSTRAP-ORIGIN.
 2022-08-11 22:39:14 +02:00
Marius Bakke e9afd8a005
gnu: LLVM: Add missing include statement for compatibility with GCC 11. 
* gnu/packages/patches/llvm-8-missing-include.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm-11, llvm-10, llvm-9, llvm-8)[source](patches):
Add it.
 2022-08-11 22:39:14 +02:00
Marius Bakke b50eaa6764
Merge branch 'master' into staging 2022-08-11 22:15:22 +02:00
Tom Fitzhenry 6ba74ab29c
gnu: Remove texlive's dependence on ruby-rspec and ruby-byebug. 
Motivation: Break the dependency chain from guix to mariadb.

Prior to this patch:

$ guix graph --path guix mariadb
guix@1.3.0-27.598f728
po4a@0.63
texlive-tiny@59745
texlive-latex-base@59745
texlive-hyphen-afrikaans@59745
ruby-hydra@0.0-0.5abfa37
ruby-byebug@11.1.3
ruby-rubocop@1.10.0
ruby-parallel@1.21.0
ruby-mysql2@0.5.2
mariadb@10.5.12

As of this patch:

$ ./pre-inst-env guix graph --path guix mariadb
guix graph: error: no path from 'guix@1.3.0-27.598f728' to 'mariadb@10.5.12'

* gnu/local.mk (dist_patch_DATA): Add texlive-hyph-utf8-no-byebug.patch.
* gnu/packages/patches/texlive-hyph-utf8-no-byebug.patch: New file.
* gnu/packages/tex.scm (hyph-utf8-scripts): Add patch.
(texlive-hyphen-package): Depend on ruby-hydra-minimal.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-08 17:26:18 +02:00
Tom Fitzhenry bb907402a6
gnu: Add ruby-hydra-minimal. 
* gnu/local.mk (dist_patch_DATA): Add ruby-hydra-minimal-no-byebug.patch.
* gnu/packages/patches/ruby-hydra-minimal-no-byebug.patch: New file.
* gnu/packages/ruby.scm (ruby-hydra): Refactor to inherit from ruby-hydra-minimal.
(ruby-hydra-minimal): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-08 17:26:18 +02:00
Marius Bakke 88f976d160
gnu: qtwayland: Fix build with GCC 11. 
* gnu/packages/patches/qtwayland-gcc-11.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/qt.scm (qtwayland)[source](patches): New field.
 2022-08-11 00:21:11 +02:00
Marius Bakke d8d4b81147
gnu: fuse@2: Prepare for newer glibc. 
* gnu/packages/patches/fuse-glibc-2.34.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (fuse)[source](patches): Add the patch.
[arguments]: Add force-bootstrap phase.
[native-inputs]: Add AUTOCONF, AUTOMAKE, GETTEXT-MINIMAL, and LIBTOOL.
 2022-08-11 00:21:10 +02:00
Efraim Flashner 9a53a79fc5
gnu: gnupg: Patch CVE-2022-34903. 
* gnu/packages/gnupg.scm (gnupg)[replacement]: New field.
(gnupg/replacement): New variable.
* gnu/packages/patches/gnupg-CVE-2022-34903.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2022-08-09 22:39:26 +03:00
Efraim Flashner 468c95e941
gnu: aspell: Patch CVE-2019-25051. 
* gnu/packages/aspell.scm (aspell)[source]: Add patch.
* gnu/packages/patches/aspell-CVE-2019-25051.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2022-08-09 22:13:33 +03:00
Efraim Flashner 5e009a8874
gnu: unzip: Patch for CVE-2022-0529 and CVE-2022-0530. 
* gnu/packages/compression.scm (unzip)[replacement]: New field.
(unzip/fixed): New variable.
* gnu/packages/patches/unzip-CVE-2022-0529+CVE-2022-0530.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2022-08-08 19:21:45 +03:00
Efraim Flashner 92769ab282
gnu: libtirpc: Fix CVE-2021-46828. 
* gnu/packages/onc-rpc.scm (libtirpc)[replacement]: New field.
(libtirpc/fixed): New variable.
(libtirpc-hurd)[source]: Add patch.
* gnu/packages/patches/libtirpc-CVE-2021-46828.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2022-08-07 17:35:58 +03:00
Efraim Flashner 544ff0b6c2
gnu: shishi: Update to 1.0.3. 
* gnu/packages/kerberos.scm (shishi): Update to 1.0.3.
[source]: Remove patch.
[arguments]: Remove configure flag overriding libgcrypt detection.
* gnu/packages/patches/shishi-fix-libgcrypt-detection.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2022-08-07 16:16:42 +03:00
vicvbcun 2b34eccbf3
gnu: lrcalc: Update to 2.1. 
* gnu/packages/algebra.scm (lrcalc): Update to 2.1.
[source]: Remove patch.
* gnu/packages/patches/lrcalc-includes.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister file.

Signed-off-by: Andreas Enge <andreas@enge.fr>
 2022-08-12 10:27:40 +02:00
vicvbcun d5a641dc2e
gnu: lcalc: Update to 2.0.5. 
* gnu/packages/sagemath.scm (lcalc): Update to 2.0.5.
* gnu/packages/patches/lcalc-default-parameters-1.patch,
gnu/packages/patches/lcalc-default-parameters-2.patch,
gnu/packages/patches/lcalc-lcommon-h.patch,
gnu/packages/patches/lcalc-using-namespace-std.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Unregister files.

Signed-off-by: Andreas Enge <andreas@enge.fr>
 2022-08-12 10:21:00 +02:00
FELŠÖCI Marek b70d6ce627
gnu: mumps: Update to 5.5.1 
* gnu/packages/maths.scm (mumps): Update to 5.5.1. Stop applying patches as the build configuration has been updated upstream. Allow for further optimized BLR compression by specifying the -DBLR_MT build option.
* gnu/packages/patches/mumps-build-parallelism.patch: File removed.
* gnu/packages/patches/mumps-shared-libseq.patch: File removed.
* gnu/packages/patches/mumps-shared-mumps.patch: File removed.
* gnu/packages/patches/mumps-shared-pord.patch: File removed.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-05 15:28:04 +02:00
Philip McGrath 14a50b62d4
gnu: ruby-anystyle: Initialize dictionary files. 
For the GDBM and Marshal dictionary adapters to be useful with their
default settings, we must initialize their data files during the package
build: upstream would initialize them lazily, but that doesn't work with
an immutable installation directory (at least, not without more complex
patches). Otherwise, we would always end up rebuilding the dictionary at
startup, which is “slow” and “not recommended”.

* gnu/packages/patches/ruby-anystyle-fix-dictionary-populate.patch: New
patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-anystyle)[patches]: Use it.
[arguments]<#:phases>: Add 'populate-dictionaries' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-04 12:05:52 +02:00
Philip McGrath bc2de56572
gnu: ruby-anystyle-data: Don't write to installed gem. 
* gnu/packages/patches/ruby-anystyle-data-immutable-install.patch: New
patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-anystyle-data)[patches]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-04 12:05:52 +02:00
Philip McGrath cc5b8cb3c0
gnu: Add ruby-latex-decode. 
* gnu/packages/patches/ruby-latex-decode-fix-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-latex-decode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-04 12:05:50 +02:00
Sharlatan Hellseher cdff1423c0
gnu: Add aoflagger. 
* gnu/packages/astronomy.scm (aoflagger): New variable.
* gnu/packages/patches/aoflagger-use-system-provided-pybind11.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-04 12:05:47 +02:00
Timotej Lazar 23cc276aaa
gnu: Add barony. 
* gnu/packages/games.scm (barony): New variable.
* gnu/packages/patches/barony-fix-textures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-04 12:05:46 +02:00
John Kehayias a4c131a749
gnu: Add neko. 
* gnu/packages/haxe.scm: New module.
(neko): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new module.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2022-08-03 14:25:52 +08:00
Vivien Kraus e2ad0b0f8b
gnu: nsis: Update to 3.08. 
* gnu/packages/patches/nsis-source-date-epoch.patch: Drop this patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/nsis-env-passthru.patch: Adjust the patch.
* gnu/packages/installers.scm (make-nsis): Update to 3.08.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2022-08-03 14:23:00 +08:00
muradm d7e7494bc4
gnu: Add fail2ban. 
* gnu/packages/admin.scm (fail2ban): New variable.
* gnu/packages/patches/fail2ban-0.11.2_CVE-2021-32749.patch,
gnu/packages/patches/fail2ban-0.11.2_fix-setuptools-drop-2to3.patch,
gnu/packages/patches/fail2ban-0.11.2_fix-test-suite.patch,
gnu/packages/patches/fail2ban-paths-guix-conf.patch,
gnu/packages/patches/fail2ban-python310-server-action.patch,
gnu/packages/patches/fail2ban-python310-server-actions.patch,
gnu/packages/patches/fail2ban-python310-server-jails.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-08-01 17:20:27 +02:00
Maxim Cournoyer 3a656ea836
gnu: jami: Apply upstream patch that fixes a usability issue. 
* gnu/packages/patches/jami-fix-esc-bug.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/jami.scm (%jami-sources): Apply it.
 2022-07-31 23:08:51 -04:00
Maxim Cournoyer bdf0fce88e
gnu: libjami: Update to 20220726.1515.da8d1da. 
* gnu/packages/patches/jami-fix-crash-on-quit.patch: Delete file.
* gnu/packages/patches/jami-images-loading.patch: Likewise.
* gnu/packages/patches/jami-libclient-audio-managers.patch: Likewise.
* gnu/packages/patches/jami-memory-usage.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): De-register removed patches.
* gnu/packages/jami.scm (%jami-version): Update to 20220726.1515.da8d1da.
(libjami)[configure-flags]: Add '--disable-static'.
(jami-apply-custom-patches): Adjust for top directory renaming.
(%ffmpeg-default-configure-flags): Add muxer support
for g726 and g726le.  Add demuxer support for g723_1, g726 and g726le.  Add
encoder/decoder support for g726, g726le and g723_1.  Add decoder support for
g729.
(ffmpeg-jami)[patches]: Add 'libopusenc-reload-packet-loss-at-encode'.
(jami-libclient)[native-inputs]: New field.
[inputs]: Add ffmpeg-jami and libxkbcommon.
[propagated-inputs]: Replace qtbase-5 with qtbase.
 2022-07-31 21:55:49 -04:00
Liliana Marie Prikler 9c02f19d6d
gnu: gst-plugins-good: Update to 1.20.3. 
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.20.3.
[source]<patches>: Remove “gst-plugins-good-fix-test.patch”.
[arguments]<#:phases>: Add ‘absolutize-libsoup-library’ and
‘skip-failing-tests’.
* gnu/packages/patches/gst-plugins-good-fix-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-07-28 20:30:43 +02:00
Marius Bakke 8a2b5f3f58
gnu: GCC: Fix union optimization issue. 
* gnu/packages/patches/gcc-10-tree-sra-union-handling.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gcc.scm (gcc-10, gcc-11)[source](patches): Add it.
* gnu/packages/rust.scm (rust-bootstrap)[native-inputs]: Remove GCC-9.
 2022-07-27 17:53:49 +02:00
Marius Bakke 6a3ed96af7
Merge branch 'staging' into core-updates 2022-07-27 17:53:05 +02:00
Marius Bakke 6611cabd1c
Merge branch 'master' into staging 2022-07-27 12:33:53 +02:00
Antero Mejr ecb91c993d
gnu: libphonenumber: Build reproducibly. 
* gnu/packages/messaging.scm (libphonenumber): Add patch.
* gnu/packages/patches/libphonenumber-reproducible-build.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register patch.

Signed-off-by: Jonathan Brielmaier <jonathan.brielmaier@web.de>
 2022-07-27 16:55:22 +02:00
Marius Bakke 0c7cfbb82b
gnu: libwpd: Fix build with newer GCC. 
* gnu/packages/patches/libwpd-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly
* gnu/packages/libreoffice.scm (libwpd)[source](patches): New field.
 2022-07-23 19:43:12 +02:00
Marius Bakke 9fcc169d6c
gnu: source-highlight: Fix build with newer GCC. 
* gnu/packages/patches/source-highlight-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/pretty-print.scm (source-highlight)[source](patches): New field.
 2022-07-23 19:43:11 +02:00
Marius Bakke 093f13610b
gnu: cyrus-sasl: Update to 2.1.28. 
* gnu/packages/cyrus-sasl.scm (cyrus-sasl): Update to 2.1.28.
[source](uri): Use new download location.
[source](patches): Remove.
[native-inputs]: Remove.
[arguments]: Remove #:phases.  Use G-expression.
* gnu/packages/patches/cyrus-sasl-CVE-2019-19906.patch,
gnu/packages/patches/cyrus-sasl-ac-try-run-fix.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-07-23 19:43:10 +02:00
Marius Bakke 57d5e06ef6
gnu: libpaper: Update to 1.2.2. 
* gnu/packages/ghostscript.scm (libpaper): Update to 1.2.2.
[source](patches): Remove.
* gnu/packages/patches/libpaper-free-systempapername.patch,
gnu/packages/patches/libpaper-free-xdg-config-home.patch,
gnu/packages/patches/libpaper-invalid-paperspecs.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-07-23 19:43:10 +02:00
Marius Bakke 7aab4eddd0
gnu: PHP: Fix test failure with newer cURL. 
* gnu/packages/patches/php-curl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/php.scm (php)[source](patches): Add it.
 2022-07-23 18:37:57 +02:00
Marius Bakke 8f2be58833
gnu: PHP: Update to 7.4.30. 
* gnu/packages/php.scm (php): Update to 7.4.30.
[source](patches): Remove obsolete patch.
* gnu/packages/patches/php-openssl_x509_checkpurpose_basic.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-07-23 18:37:57 +02:00
Marius Bakke 9044b086dd
Merge branch 'staging' into core-updates 2022-07-22 01:09:14 +02:00
Marius Bakke abea091dbe
Merge branch 'master' into staging 2022-07-21 23:52:47 +02:00
Felix Gruber 17a8a09795
gnu: libgeotiff: Update to 1.7.1. 
* gnu/packages/geo.scm (libgeotiff): Update to 1.7.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-07-18 00:21:31 +02:00
vicvbcun a0f39b7d79
gnu: eigen: Update to 3.4.0. 
* gnu/packages/algebra.scm (eigen): Update to 3.4.0.
* gnu/packages/patches/eigen-fix-strict-aliasing-bug.patch: New file.
* gnu/packages/patches/eigen-remove-openmp-error-counting.patch,
gnu/packages/patches/eigen-stabilise-sparseqr-test.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-07-23 00:39:56 +02:00