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69196 Commits (863c66e3061118449a02e78be863d88bd877b70d)

Author SHA1 Message Date
Tobias Geerinckx-Rice 80817b5098
gnu: multipath-tools: Update to 0.8.5.
* gnu/packages/linux.scm (multipath-tools): Update to 0.8.5.
[source]: Remove patch.
[arguments]: Add a ‘skip-failing-tests’ phase.
* gnu/packages/patches/multipath-tools-sans-systemd.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-11-15 00:12:12 +01:00
Tobias Geerinckx-Rice 1ba5071c2d
gnu: msmtp: Update to 1.8.13.
* gnu/packages/mail.scm (msmtp): Update to 1.8.13.
2020-11-15 00:12:12 +01:00
Tobias Geerinckx-Rice 79bf16f688
gnu: ogre: Update to 1.12.9.
The imgui submodule has been removed upstream.

* gnu/packages/graphics.scm (ogre): Update to 1.12.9.
[source]: Don't clone recursively.
[native-inputs]: Add dear-imgui-source.
[arguments]: Add an ‘unpack-dear-imgui’ phase.
Add IMGUI_DIR to #:configure-flags.
2020-11-15 00:12:12 +01:00
Tobias Geerinckx-Rice e23d5aa908
gnu: Add dear-imgui.
* gnu/packages/graphics.scm (dear-imgui): New public variable.
2020-11-15 00:12:12 +01:00
Tobias Geerinckx-Rice 0e8df7403e
gnu: Update stb to b42009b3b9d4ca35bc703f5310eedc74f584be58.
* gnu/packages/stb.scm (stb): Update to commit b42009b3b9d4ca35bc703f5310eedc74f584be58..
(stb-image): Update version number to 2.26.
(stb-image-write): Update version number to 1.15.
(stb-sprintf): Update version number to 1.09.
(stb-truetype): Update version number to 1.24.
2020-11-15 00:12:12 +01:00
Tobias Geerinckx-Rice 6f5f60b289
gnu: Add stb-rect-pack.
* gnu/packages/stb.scm (stb-rect-pack): New public variable.
2020-11-15 00:12:11 +01:00
Tobias Geerinckx-Rice 89f25a813a
gnu: perl-lwp-protocol-https: Update to 6.09.
* gnu/packages/web.scm (perl-lwp-protocol-https): Update to 6.09.
2020-11-15 00:12:11 +01:00
Tobias Geerinckx-Rice 1b0cda6b44
gnu: qemu: Extend I/O test time-outs.
* gnu/packages/virtualization.scm (qemu)[arguments]: Add an
‘extend-test-time-outs’ phase.
2020-11-15 00:12:11 +01:00
Tobias Geerinckx-Rice e48eac3b3e
gnu: python-podcastparser: Update to 0.6.6.
* gnu/packages/gpodder.scm (python-podcastparser): Update to 0.6.6.
[native-inputs, arguments]: Substitute python-pytest for python-coverage
& python-nose.
2020-11-15 00:12:11 +01:00
Tobias Geerinckx-Rice 808fc71e7c
gnu: fio: Update to 3.24.
* gnu/packages/benchmark.scm (fio): Update to 3.24.
2020-11-15 00:12:11 +01:00
Tobias Geerinckx-Rice 2c560aa217
gnu: perl-www-curl: Fix build with curl@7.69.1.
* gnu/packages/web.scm (perl-www-curl)[source]:
Add perl-www-curl-fix-struct-void.patch.
* gnu/packages/patches/perl-www-curl-remove-symbol.patch: Update.
* gnu/packages/patches/perl-www-curl-fix-struct-void.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-11-15 00:12:11 +01:00
Matthew Kraai 16144199c3
doc: Remove superfluous comma.
* doc/guix.texi (Managing Software the Guix Way): Remove comma.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-11-14 12:00:21 -05:00
Maxim Cournoyer a35f3a4233
gnu: cqfd: Update to 5.2.1.
* gnu/packages/docker.scm (cqfd): Update to 5.2.1.
2020-11-14 11:41:07 -05:00
Maxim Cournoyer 7c816ed493
gnu: python-numba: Update to 0.51.2.
Fixes <https://issues.guix.gnu.org/43546>.

* gnu/packages/python-xyz.scm (python-numba): Update to 0.51.2.
[arguments]: Remove #:modules.
[phases]{check}: Use add-installed-pythonpath instead of some ad-hoc
solution.  Set HOME.
{remove-failing-tests}: Remove.
[inputs]: Move to...
[native-inputs]: ...here.
2020-11-14 11:41:07 -05:00
Maxim Cournoyer 8a34f29292
gnu: python-llvmlite: Update to 0.34.0.
This is in preparation of updating the broken python-numba package.

* gnu/packages/llvm.scm (python-llvmlite): Update to 0.34.0.
[arguments]: Enable tests.
[phases]{patch-reference-to-llvmlite, skip-failing-tests}
{set-compiler/linker-flags}: New phases.
[inputs]: Update custom LLVM input and associated patches.
[home-page]: Use HTTPS.
2020-11-14 11:41:07 -05:00
Maxim Cournoyer 9e4c24ef90
gnu: llvm-9: Standardize patch level.
Having a non-standard (different than 1) patch level requirement means the
patches cannot be composed easily from different origins.  The following
command was used to remove one level from the llvm-9 patches:

  sed -e 's|^--- a/|--- |' -e 's|^+++ b/|+++ |' \
      gnu/packages/patches/llvm-9* -i

* gnu/packages/llvm.scm (llvm-9)[source]: Drop the patch-flags field.
Re-indent list of patches.
* gnu/packages/patches/llvm-9-fix-bitcast-miscompilation.patch: Strip one level.
* gnu/packages/patches/llvm-9-fix-lpad-miscompilation.patch: Likewise.
* gnu/packages/patches/llvm-9-fix-scev-miscompilation.patch: Likewise.
2020-11-14 11:41:07 -05:00
nixo 199ebb1298
gnu: Add kristall.
* gnu/packages/web-browsers.scm (kristall): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-14 16:19:36 +00:00
Alexandru-Sergiu Marton 870d74ab68
gnu: gmnisrv: Update to 0-1.d484ba0.
* gnu/packages/web.scm (gmnisrv): Update to 0-1.d484ba0.
[arguments]: Remove the install-config phase.
[propagated-inputs]: Add mailcap.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-14 11:32:41 +00:00
Alexandru-Sergiu Marton 149dd51d2f
services: gmnisrv: Export procedures and service type.
* gnu/services/web.scm: Export gmnisrv-configuration, gmnisrv-configuration?,
gmnisrv-configuration-package, gmnisrv-configuration-config-file,
gmnisrv-service-type.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-14 11:32:40 +00:00
Alexandru-Sergiu Marton 85ad155158
gnu: Add mailcap.
* gnu/packages/mail.scm (mailcap): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-14 11:32:37 +00:00
Pierre Neidhardt 403ba4140f
gnu: emacs-evil-collection: Update to 20201113.
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 20201113.
2020-11-14 12:22:53 +01:00
Holger Peters 289b20ef62
doc: Document hg-fetch.
* doc/guix.texi (origin Reference): Add documentation for hg-fetch.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-14 10:27:00 +00:00
Holger Peters 521d33cdc6
guix: hg-download: Add hg-predicate.
`hg-predicate' acts for mercurial repositories as `git-predicate' acts
for git-repositories.

* guix/hg-download.scm (hg-predicate): New procedure.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-11-14 10:27:00 +00:00
Pierre Neidhardt 2980b726d3
gnu: emacs-helm-system-packages: Update to 1.10.2.
* gnu/packages/emacs-xyz.scm (emacs-helm-system-packages): Update to 1.10.2.
2020-11-14 11:26:04 +01:00
Christopher Baines e365f8b26c
doc: Fix Guix Build Coordinator agent configuration defaults.
* doc/guix.texi (Guix Build Coordinator): Fix some
guix-build-coordinator-agent-configuration defaults.
2020-11-14 09:51:17 +00:00
宋文武 7f9888e53f
gnu: Add sx.
* gnu/packages/xdisorg.scm (sx): New variable.
2020-11-14 10:23:07 +08:00
Tobias Geerinckx-Rice 0404b28dc7
gnu: python-pykeepass: Update to 3.2.1.
* gnu/packages/python-crypto.scm (python-pykeepass): Update to 3.2.1.
[propagated-inputs]: Substitute python-pycryptodomex for
python-pycryptodome.
2020-11-14 01:50:35 +01:00
Tobias Geerinckx-Rice c8ca9eb8f3
gnu: python-pycryptodome: Note public-domain legacy.
* gnu/packages/python-pycryptodome.scm (python-pycryptodome)[license]:
Add public-domain.
2020-11-14 01:50:34 +01:00
Tobias Geerinckx-Rice 970a3026e9
gnu: python-pycryptodome: Expand description.
* gnu/packages/python-crypto.scm (python-pycryptodome)[synopsis, description]:
Copy higher-level description from python-pycryptodomex.
2020-11-14 01:50:33 +01:00
Tobias Geerinckx-Rice 5ef1913ce6
gnu: Add python-pycryptodomex.
* gnu/packages/python-crypto.scm (python-pycryptodomex): New public
variable.
2020-11-14 01:50:32 +01:00
Tobias Geerinckx-Rice e0c34c1a4c
gnu: lua-resty-lrucache: Update to 0.10.
* gnu/packages/lua.scm (lua-resty-lrucache): Update to 0.10.
2020-11-14 01:50:31 +01:00
Tobias Geerinckx-Rice 9c3a29e382
gnu: lua-resty-core: Update to 0.1.18.
* gnu/packages/lua.scm (lua-resty-core): Update to 0.1.18.
2020-11-14 01:50:30 +01:00
Tobias Geerinckx-Rice c41314853d
gnu: nginx-lua-module: Update to 0.10.16.
* gnu/packages/web.scm (nginx-lua-module): Update to 0.10.16.
2020-11-14 01:50:30 +01:00
Tobias Geerinckx-Rice b5454eb33d
gnu: libgda: Update to 5.2.10.
* gnu/packages/gnome.scm (libgda): Update to 5.2.10.
[source]: Generate git tag from version number.
[native-inputs]: Add autoconf-archive.
2020-11-14 01:50:29 +01:00
Tobias Geerinckx-Rice 7214dc8449
gnu: python-duniterpy: Update to 0.60.1.
* gnu/packages/finance.scm (python-duniterpy): Update to 0.60.1.
2020-11-14 01:50:28 +01:00
Tobias Geerinckx-Rice 647d1ece49
gnu: inxi-minimal: Update to 3.1.09-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.1.09-1.
2020-11-14 01:50:27 +01:00
Ludovic Courtès c6e8f40f2c
maint: Rebuild '.version' when 'config.status' changes.
* Makefile.am ($(top_srcdir)/.version): Depend on 'config.status'.  Use
$(AM_V_GEN).
2020-11-13 22:48:34 +01:00
Ricardo Wurmus 4e9b2e8ba2
gnu: inspekt3d: Build with Guile 3.
* gnu/packages/engineering.scm (inspekt3d)
[source]: Add snippet to allow building with Guile 3.0.
[inputs]: Replace guile-2.2 with guile-3.0.
[propagated-inputs]: Replace guile-opengl with guile3.0-opengl.
2020-11-13 21:42:45 +01:00
Ricardo Wurmus dd012afde4
gnu: libfive: Update to 0-4.8ca1b86.
* gnu/packages/engineering.scm (libfive): Update to 0-4.8ca1b86.
[inputs]: Replace guile-2.2 with guile-3.0.
2020-11-13 21:42:45 +01:00
Ludovic Courtès 627e61f1a8
maint: Add '.guix-authorizations' to the distribution.
Reported by Vagrant Cascadian.

* Makefile.am (EXTRA_DIST): Add .guix-authorizations.
2020-11-13 21:31:22 +01:00
Tobias Geerinckx-Rice f6e031ab36
gnu: julia: Update to 1.5.3.
* gnu/packages/julia.scm (julia): Update to 1.5.3.
(libuv-julia): Update to 1fcc6d66f9df74189c74d3d390f02202bb7db953.
(julia-patch): Update version.  No change to patches.
2020-11-13 19:43:25 +01:00
Tobias Geerinckx-Rice db2f95f1c2
gnu: libwhich: Compile natively, too.
This follows up on commit 12424b3ecf.

* gnu/packages/julia.scm (libwhich)[arguments]: Fix non-cross
compilation.
2020-11-13 19:43:25 +01:00
John Soo 0cdc13ce43
guix build: Expose log-url for third parties.
* guix/scripts/build.scm (log-url): Expose it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-11-13 18:11:30 +01:00
John Soo e783cd51ba
pack: Expose some bindings for third-party use.
* guix/scripts/pack.scm (compressor-name, compressor-extension,
compressor-command, %compressors, %formats): Export.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-11-13 18:10:11 +01:00
Ludovic Courtès 0b146ceaab
Merge branch 'version-1.2.0' of ssh://git.sv.gnu.org/srv/git/guix into version-1.2.0 2020-11-13 17:02:49 +01:00
Maxim Cournoyer 4e01bc440a
gnu: python-pysam: Update to version 0.16.0.1.
The check phase was failing with:

starting phase `check'
make: Entering directory '...drv-0/python-pysam-0.15.1-checkout/tests/pysam_data'
samtools faidx ex1.fa
samtools import ex1.fa.fai ex1.sam.gz ex1.bam
[main] "samtools import" has been removed. Please use "samtools view" instead.
make: *** [Makefile:56: ex1.bam] Error 1

* gnu/packages/bioinformatics.scm (python-pysam): Update to version 0.16.0.1.
[phases]{check}: Delete a couple more failing test files.
[native-inputs]: Add python-pytest.
2020-11-13 10:17:00 -05:00
Roel Janssen 37ba374a53
gnu: Fix build for python-pysam.
* gnu/packages/bioinformatics.scm (python-pysam): Use htslib-1.9,
  samtools-1.9, and bcftools-1.9.
2020-11-13 16:16:43 +01:00
Roel Janssen ecc309c142
gnu: Add bcftools-1.9.
* gnu/packages/bioinformatics.scm (bcftools-1.9): New variable.
2020-11-13 16:14:01 +01:00
Ekaitz Zarraga 3a15847685
gnu: dino: Update to 0.2.0
Update of the recently released Dino 0.2.0 version.

Thanks!

From 0b764d48996f3851ee2596a25f1fd42a8d3f4063 Mon Sep 17 00:00:00 2001
From: Ekaitz Zarraga <ekaitz@elenq.tech>
Date: Fri, 13 Nov 2020 12:18:11 +0100
Subject: [PATCH] gnu: dino: Update to 0.2.0

    * gnu/packages/messaging.scm (dino): Update to 0.2.0

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-11-13 15:02:33 +01:00
Tobias Geerinckx-Rice 12424b3ecf
gnu: libwhich: Cross-compile.
* gnu/packages/julia.scm (libwhich)[arguments]: Use CC-FOR-TARGET.
Look for zlib in NATIVE-INPUTS.
2020-11-13 15:02:32 +01:00