Ricardo Wurmus
|
6aa896d82e
|
gnu: Update copyright headers.
This is a follow-up to commit 1fe9a36173.
* gnu/packages/bioconductor.scm: Update copyright header to account for moved
package.
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2019-03-06 21:07:49 +01:00 |
|
Ricardo Wurmus
|
3dad6087be
|
gnu: Add r-org-dr-eg-db.
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
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2019-03-06 10:29:25 +01:00 |
|
Ricardo Wurmus
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3a0babacdc
|
gnu: Add r-htscluster.
* gnu/packages/bioconductor.scm (r-htscluster): New variable.
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2019-03-04 15:00:18 +01:00 |
Ricardo Wurmus
|
c18dccffa2
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gnu: Add r-dnacopy.
* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
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2019-02-12 15:41:02 +01:00 |
|
Ricardo Wurmus
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14bba460ab
|
gnu: r-biocgenerics: Move to bioconductor.
* gnu/packages/bioinformatics.scm (r-biocgenerics): Move from here...
* gnu/packages/bioconductor.scm (r-biocgenerics): ...to here.
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2019-01-13 13:04:18 +01:00 |
|
Ricardo Wurmus
|
7097c7009d
|
gnu: r-annotate: Move to bioconductor.
* gnu/packages/bioinformatics.scm (r-annotate): Move from here...
* gnu/packages/bioconductor.scm (r-annotate): ...to here.
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2019-01-13 13:04:18 +01:00 |
|
Ricardo Wurmus
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c6e9b494e8
|
gnu: r-ruvseq: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.1.
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2019-01-12 23:35:19 +01:00 |
|
Ricardo Wurmus
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c86fc96987
|
gnu: r-inspect: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.1.
[propagated-inputs]: Add r-deseq2, r-plgem, r-shiny, r-summarizedexperiment,
and r-txdb-mmusculus-ucsc-mm9-knowngene.
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2019-01-12 23:35:19 +01:00 |
|
Ricardo Wurmus
|
d220babf34
|
gnu: Add r-txdb-mmusculus-ucsc-mm9-knowngene.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene): New
variable.
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2019-01-12 23:35:19 +01:00 |
|
Ricardo Wurmus
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cad6fb2dec
|
gnu: Add r-plgem.
* gnu/packages/bioconductor.scm (r-plgem): New variable.
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2019-01-12 23:35:19 +01:00 |
|
Ricardo Wurmus
|
45dcd7dcfd
|
gnu: r-rots: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.1.
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2019-01-12 23:35:19 +01:00 |
|
Ricardo Wurmus
|
0b469ee225
|
gnu: r-glimma: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.1.
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2019-01-12 23:35:19 +01:00 |
|
Ricardo Wurmus
|
7f2b1c4af0
|
gnu: r-goseq: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.1.
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2019-01-12 23:35:18 +01:00 |
|
Ricardo Wurmus
|
add2b19561
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gnu: r-chippeakanno: Update to 3.16.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.1.
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2019-01-12 23:35:18 +01:00 |
|
Ricardo Wurmus
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41ffc214e4
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gnu: Add r-chipexoqual.
* gnu/packages/bioconductor.scm (r-chipexoqual): New variable.
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2018-11-27 23:56:23 +01:00 |
|
Ricardo Wurmus
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a961ae469c
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gnu: Add r-destiny.
* gnu/packages/bioconductor.scm (r-destiny): New variable.
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2018-11-09 17:15:31 +01:00 |
|
Ricardo Wurmus
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8a587c89af
|
gnu: Add r-savr.
* gnu/packages/bioconductor.scm (r-savr): New variable.
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2018-11-09 16:45:21 +01:00 |
|
Ricardo Wurmus
|
d639d8884c
|
gnu: r-regioner: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.14.0.
[propagated-inputs]: Add r-biostrings.
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2018-11-07 12:26:33 +01:00 |
|
Ricardo Wurmus
|
ed35d7ca1f
|
gnu: r-ruvseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.0.
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2018-11-07 12:26:33 +01:00 |
|
Ricardo Wurmus
|
286157dc49
|
gnu: Add r-biocneighbors.
* gnu/packages/bioconductor.scm (r-biocneighbors): New variable.
|
2018-11-07 12:26:33 +01:00 |
|
Ricardo Wurmus
|
318bcbc451
|
gnu: r-dnabarcodes: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.12.0.
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2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
6f1e1d0f88
|
gnu: r-inspect: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
c348cfed74
|
gnu: r-rots: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
016afac30f
|
gnu: r-glimma: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
6ea9ae9c39
|
gnu: r-goseq: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
b858338c76
|
gnu: r-ctc: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.56.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
5f2d0e635e
|
gnu: r-genomicinteractions: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.16.0.
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2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
bbc4787cf2
|
gnu: r-interactionset: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.10.0.
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2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
c4fed658a9
|
gnu: r-riboseqr: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.16.0.
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2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
e22e462b33
|
gnu: r-riboprofiling: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.12.0.
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2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
e9427b2c78
|
gnu: r-ripseeker: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.22.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
aa802eafb6
|
gnu: r-chipcomp: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.12.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
4728e27511
|
gnu: r-bayseq: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.16.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
57d2fcd9ee
|
gnu: r-chippeakanno: Update to 3.16.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.0.
[propagated-inputs]: Remove r-biocinstaller; add r-biocmanager.
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2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
14520b640e
|
gnu: r-graph: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.60.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
95ee4a466b
|
gnu: r-multtest: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.38.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
a92f523026
|
gnu: r-qdnaseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.18.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
9add0933d0
|
gnu: r-cghcall: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.44.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
46cdceef4c
|
gnu: r-cghbase: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.42.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
f1c606ce8c
|
gnu: r-marray: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.60.0.
|
2018-11-07 12:26:32 +01:00 |
|
Ricardo Wurmus
|
98652568a4
|
gnu: r-diffbind: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.10.0.
|
2018-11-07 12:26:31 +01:00 |
|
Ricardo Wurmus
|
6168692159
|
gnu: r-hpar: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.24.0.
|
2018-11-07 12:26:31 +01:00 |
|
Ricardo Wurmus
|
696e1ce263
|
gnu: r-graph: Update to 1.58.2.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.58.2.
|
2018-10-30 21:39:50 +01:00 |
|
Ricardo Wurmus
|
09aa3d063a
|
gnu: Add r-ruvseq.
* gnu/packages/bioconductor.scm (r-ruvseq): New variable.
|
2018-10-22 13:00:24 +02:00 |
|
Ricardo Wurmus
|
f6e9976393
|
gnu: Add r-dnabarcodes.
* gnu/packages/bioconductor.scm (r-dnabarcodes): New variable.
|
2018-10-08 14:19:04 +02:00 |
|
Ricardo Wurmus
|
35c076e619
|
gnu: r-chippeakanno: Update to 3.14.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.2.
|
2018-09-09 22:26:02 +02:00 |
|
Ricardo Wurmus
|
a207bca2ad
|
gnu: r-codedepends: Move from cran to bioconductor.
* gnu/packages/cran.scm (r-codedepends): Move from here...
* gnu/packages/bioconductor.scm (r-codedepends): ...to here.
|
2018-09-05 20:03:08 +02:00 |
|
Ricardo Wurmus
|
5dfe491290
|
gnu: r-graph: Move from bioinformatics to bioconductor.
* gnu/packages/bioinformatics.scm (r-graph): Move from here...
* gnu/packages/bioconductor.scm (r-graph): ...to here.
|
2018-09-05 20:03:08 +02:00 |
|
Ricardo Wurmus
|
65050163e0
|
gnu: r-chippeakanno: Update to 3.14.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.1.
|
2018-09-05 20:03:03 +02:00 |
|
Ricardo Wurmus
|
b64ce4b725
|
gnu: Add r-inspect.
* gnu/packages/bioconductor.scm (r-inspect): New variable.
|
2018-08-16 17:04:13 +02:00 |
|
Ricardo Wurmus
|
aa388dc7b9
|
gnu: Add r-rots.
* gnu/packages/bioconductor.scm (r-rots): New variable.
|
2018-07-05 15:08:44 +02:00 |
|
Ricardo Wurmus
|
f4235c0eca
|
gnu: Add r-glimma.
* gnu/packages/bioconductor.scm (r-glimma): New variable.
|
2018-07-05 15:08:44 +02:00 |
|
Ricardo Wurmus
|
5da0e14285
|
gnu: Add r-goseq.
* gnu/packages/bioconductor.scm (r-goseq): New variable.
|
2018-07-05 15:08:44 +02:00 |
|
Ricardo Wurmus
|
27c51606ae
|
gnu: Add r-ctc.
* gnu/packages/bioconductor.scm (r-ctc): New variable.
|
2018-07-05 15:08:44 +02:00 |
|
Ricardo Wurmus
|
2cc5110832
|
gnu: Add r-genelendatabase.
* gnu/packages/bioconductor.scm (r-genelendatabase): New variable.
|
2018-07-05 15:08:44 +02:00 |
|
Ricardo Wurmus
|
cf9a29b24c
|
gnu: Add r-genomicinteractions.
* gnu/packages/bioconductor.scm (r-genomicinteractions): New variable.
|
2018-06-15 09:14:01 +02:00 |
|
Ricardo Wurmus
|
a32279ffb6
|
gnu: Add r-interactionset.
* gnu/packages/bioconductor.scm (r-interactionset): New variable.
|
2018-06-15 09:14:01 +02:00 |
|
Ricardo Wurmus
|
6ffdfe6a01
|
gnu: Add r-riboseqr.
* gnu/packages/bioconductor.scm (r-riboseqr): New variable.
|
2018-06-15 07:43:23 +02:00 |
|
Ricardo Wurmus
|
0490f9de88
|
gnu: Add r-riboprofiling.
* gnu/packages/bioconductor.scm (r-riboprofiling): New variable.
|
2018-06-15 07:43:22 +02:00 |
|
Ricardo Wurmus
|
609f4ad12f
|
gnu: Add r-chipcomp.
* gnu/packages/bioconductor.scm (r-chipcomp): New variable.
|
2018-06-15 07:43:22 +02:00 |
|
Ricardo Wurmus
|
2bece692a6
|
gnu: Add r-bsgenome-mmusculus-ucsc-mm9-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked): New
variable.
|
2018-06-15 07:43:22 +02:00 |
|
Ricardo Wurmus
|
6fbd759b13
|
gnu: Add r-bsgenome-hsapiens-ucsc-hg19-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked): New
variable.
|
2018-06-15 07:43:22 +02:00 |
|
Ricardo Wurmus
|
dfac7eb917
|
gnu: Add r-bsgenome-dmelanogaster-ucsc-dm3-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3-masked):
New variable.
|
2018-06-15 07:43:22 +02:00 |
|
Ricardo Wurmus
|
bb15b581f7
|
gnu: Add r-bayseq.
* gnu/packages/bioconductor.scm (r-bayseq): New variable.
|
2018-06-15 07:43:22 +02:00 |
|
Ricardo Wurmus
|
81b0181b6f
|
gnu: r-qdnaseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.16.0.
[propagated-inputs]: Add r-biocparallel.
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2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
5c0df206cf
|
gnu: r-cghcall: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.42.0.
|
2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
205df4a4cb
|
gnu: r-cghbase: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.40.0.
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2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
6748708883
|
gnu: r-marray: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.58.0.
[propagated-inputs]: Remove r-biobase.
|
2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
f794e85daa
|
gnu: r-chippeakanno: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.0.
[propagated-inputs]: Add r-biostrings, r-delayedarray, r-genomicranges,
r-iranges, and r-s4vectors.
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2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
43734b4727
|
gnu: r-ripseeker: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.20.0.
|
2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
45bbccf4e7
|
gnu: r-diffbind: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.8.0.
[propagated-inputs]: Add r-genomicranges, r-ggplot2, and
r-summarizedexperiment.
|
2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
72427c721d
|
gnu: r-regioner: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.12.0.
[propagated-inputs]: Add r-s4vectors.
|
2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
2f5b3d8e90
|
gnu: r-hpar: Update to 1.22.2.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.22.2.
|
2018-06-02 13:39:06 +02:00 |
|
Ricardo Wurmus
|
183db725a4
|
gnu: Add r-bsgenome-dmelanogaster-ucsc-dm6.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6): New variable.
|
2018-05-15 12:56:53 +02:00 |
Tobias Geerinckx-Rice
|
f39938b177
|
gnu: r-multtest: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.36.0.
|
2018-05-04 02:22:01 +02:00 |
Roel Janssen
|
0ef8cc9c1c
|
gnu: Add r-qdnaseq.
* gnu/packages/bioconductor.scm (r-qdnaseq): New variable.
|
2018-04-24 14:12:32 +02:00 |
|
Roel Janssen
|
67ee83d6c3
|
gnu: Add r-cghcall.
* gnu/packages/bioconductor.scm (r-cghcall): New variable.
|
2018-04-24 14:12:15 +02:00 |
|
Roel Janssen
|
0416a0d4d5
|
gnu: Add r-cghbase.
* gnu/packages/bioconductor.scm (r-cghbase): New variable.
|
2018-04-24 14:11:51 +02:00 |
|
Roel Janssen
|
164502d819
|
gnu: Add r-marray.
* gnu/packages/bioconductor.scm (r-marray): New variable.
|
2018-04-24 14:11:19 +02:00 |
|
Roel Janssen
|
793f83efe1
|
gnu: Add r-chippeakanno.
* gnu/packages/bioconductor.scm (r-chippeakanno): New variable.
|
2018-04-24 13:59:39 +02:00 |
|
Roel Janssen
|
a6ae9ffd6a
|
gnu: Add r-multtest.
* gnu/packages/bioconductor.scm (r-multtest): New variable.
|
2018-04-24 13:59:33 +02:00 |
|
Roel Janssen
|
6d94bf6baa
|
gnu: Add r-ripseeker.
* gnu/packages/bioconductor.scm (r-ripseeker): New variable.
|
2018-04-24 13:34:29 +02:00 |
|
Roel Janssen
|
a5b56a5346
|
gnu: Add r-diffbind.
* gnu/packages/bioconductor.scm (r-diffbind): New variable.
|
2018-04-24 13:33:56 +02:00 |
|
Roel Janssen
|
183ce98849
|
gnu: Add r-regioner.
* gnu/packages/bioconductor.scm (r-regioner): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
|
2018-03-30 10:47:57 -04:00 |
|
Ricardo Wurmus
|
fa5965990d
|
gnu: Add r-hpar.
* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
|
2018-03-02 23:24:57 +01:00 |