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79354 Commits (8ad54dc134542ac1a9b6806da5e027a603e4653e)

Author SHA1 Message Date
Ricardo Wurmus 8ad54dc134
gnu: r-catalyst: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 2fe8673263
gnu: r-msmstests: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.30.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus e501608db3
gnu: r-msmseda: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.30.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus b5a387745a
gnu: r-biocio: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.2.0.
[propagated-inputs]: Remove r-genomicranges and r-rcurl.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus aaf095825b
gnu: r-mscoreutils: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.4.0.
[propagated-inputs]: Add r-clue.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 47e291df84
gnu: r-delayedmatrixstats: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.0.
[propagated-inputs]: Remove r-biocparallel and r-hdf5array.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 360477c202
gnu: r-sparsematrixstats: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 015ba64bc0
gnu: r-scran: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.20.1.
[propagated-inputs]: Remove r-biocneighbors; add r-metapod.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus d9755a22f6
gnu: r-scater: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-scater): Update to 1.20.0.
[propagated-inputs]: Add r-beachmat, r-rcolorbrewer, and r-rtsne.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 851894f8da
gnu: r-scuttle: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.0.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus b21a73c00b
gnu: r-singlecellexperiment: Update to 1.14.1. 
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.14.1.
[propagated-inputs]: Add r-delayedarray and r-genomicranges.
 2021-06-05 09:12:57 +02:00
Ricardo Wurmus 71e392966a
gnu: r-chromvar: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.14.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 56a2dcfdc7
gnu: r-motifmatchr: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.14.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 0b6b42b6c4
gnu: r-tfbstools: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.30.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus a92a277873
gnu: r-cner: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-cner): Update to 1.28.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 370d020e88
gnu: r-beachmat: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.0.
[propagated-inputs]: Add r-rcpp.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus dbb929bf4a
gnu: r-hitc: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.36.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 914bd41da9
gnu: r-fithic: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.18.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 64b03c66ad
gnu: r-rgraphviz: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.36.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 5565b8bada
gnu: r-s4vectors: Update to 0.30.0. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus a78daaa572
gnu: r-preprocesscore: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.54.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus a9f203ba6c
gnu: r-icens: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-icens): Update to 1.64.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 3b19239c0f
gnu: r-m3c: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.14.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 06dd2fd625
gnu: r-rgreat: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.24.0.
 2021-06-05 09:12:56 +02:00
Ricardo Wurmus 5d611d3f15
gnu: r-pcatools: Update to 2.4.0. 
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.4.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus db46064043
gnu: r-biodist: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.64.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 36f51f8afe
gnu: r-biocworkflowtools: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.18.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus e828fa21bb
gnu: r-biocset: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus e9e4f65dc1
gnu: r-biocpkgtools: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.10.1.
[propagated-inputs]: Remove r-rappdirs.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 2023951c8e
gnu: r-biocor: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.16.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 4faded238e
gnu: r-bioconcotk: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.12.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus e7b465e81b
gnu: r-multiassayexperiment: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.18.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 37f824c5e7
gnu: r-grohmm: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.26.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 28613e1000
gnu: r-experimenthub: Update to 2.0.0. 
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.0.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 1e2c0e824c
gnu: r-biocviews: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.60.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 6513592747
gnu: r-biocstyle: Update to 2.20.0. 
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus cd9af2379d
gnu: r-biocgraph: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.54.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 834a6dbaab
gnu: r-ebarrays: Update to 2.56.0. 
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.56.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus f218b9b216
gnu: r-reactomepa: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.36.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus a95a14c0cc
gnu: r-graphite: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.38.0.
[native-inputs]: Add r-knitr.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus dc2878754c
gnu: r-biobroom: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.24.0.
 2021-06-05 09:12:55 +02:00
Ricardo Wurmus 7c990fbcb3
gnu: r-bioassayr: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.30.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 02ec364cf6
gnu: r-chemminer: Update to 3.44.0. 
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.44.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 8a8f200703
gnu: r-bigpint: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.8.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 90eb7ae1a9
gnu: r-biggr: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.28.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 302929da31
gnu: r-hyperdraw: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.44.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus d51885812f
gnu: r-hypergraph: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.64.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 92f5efa65d
gnu: r-rsbml: Update to 2.50.0. 
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.50.0.
[inputs]: Remove zlib.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 58b8ed9f08
gnu: r-bifet: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.12.0.
 2021-06-05 09:12:54 +02:00
Ricardo Wurmus 49403e8241
gnu: r-bicare: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.50.0.
 2021-06-05 09:12:54 +02:00