9483782a61
gnu: rust: Add 1.39
...
* gnu/packages/rust.scm (rust-1.39): New variable.
(%cargo-reference-hash): Add a comment explaining the role of the
variable.
2020-03-27 14:28:11 +01:00
444bc2ddf2
gnu: rust: Add 1.38
...
All packages are still built with rustc 1.37, but users will see rustc
1.38 in their profiles, and packages that require newer compiler
versions will be possible to add.
* gnu/packages/rust.scm (rust-1.31): Factor out the
patch-command-exec-tests phase to a separate procedure.
(patch-command-exec-tests-phase): New procedure.
(rust): Rename to rust-1.37, make rust an alias.
(rust-1.38): New variable.
2020-03-27 14:28:06 +01:00
1a7247c629
gnu: asymptote: Update to 2.65.
...
* gnu/packages/plotutils.scm (asymptote): Update to 2.65.
2020-03-27 12:20:35 +01:00
2ba5253044
gnu: r-multiassayexperiment: Update to 1.12.6.
...
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.6.
2020-03-27 11:21:13 +01:00
37732212a3
gnu: r-locfit: Update to 1.5-9.4.
...
* gnu/packages/statistics.scm (r-locfit): Update to 1.5-9.4.
2020-03-27 11:21:13 +01:00
c99880320d
gnu: r-class: Update to 7.3-16.
...
* gnu/packages/statistics.scm (r-class): Update to 7.3-16.
2020-03-27 11:21:13 +01:00
3345157fa6
gnu: r-xgboost: Update to 1.0.0.2.
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* gnu/packages/cran.scm (r-xgboost): Update to 1.0.0.2.
2020-03-27 11:21:13 +01:00
76d7ce4f45
gnu: r-rjava: Update to 0.9-12.
...
* gnu/packages/cran.scm (r-rjava): Update to 0.9-12.
2020-03-27 11:21:13 +01:00
84b7c4aa17
gnu: r-sf: Update to 0.9-0.
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* gnu/packages/cran.scm (r-sf): Update to 0.9-0.
[native-inputs]: Add r-knitr.
2020-03-27 11:21:13 +01:00
498c887a96
gnu: r-bayestestr: Update to 0.5.3.
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* gnu/packages/cran.scm (r-bayestestr): Update to 0.5.3.
[native-inputs]: Add r-knitr.
2020-03-27 11:21:13 +01:00
9c189913e9
gnu: r-hdf5r: Update to 1.3.2.
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* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.2.
[native-inputs]: Add r-knitr.
2020-03-27 11:21:13 +01:00
6232a36291
gnu: r-ggally: Update to 1.5.0.
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* gnu/packages/cran.scm (r-ggally): Update to 1.5.0.
2020-03-27 11:21:13 +01:00
0a76a4e073
gnu: guix-data-service: Update to 0.0.1-19.d1c243f.
...
These changes support the guix-data-service-backup-database and
guix-data-service-create-small-backup scripts. These are shell scripts, so
require coreutils from the build environment at runtime as well as binaries
from postgresql, ephemeralpg and optionally util-linux (for ionice and
renice).
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-19.d1c243f.
[arguments]: Add (ice-9 ftw) and (ice-9 match) to #:modules, change the
'install phase to wrap all bin files with some inputs as well.
[inputs]: Add util-linux, include ephemeralpg from native-inputs and switch
postgresql for postgresql-11.
[native-inputs]: Move ephemeralpg to inputs.
2020-03-26 22:51:36 +00:00
01d5f2c5cd
gnu: Add python-json5.
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* gnu/packages/python-xyz.scm (python-json5): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-03-26 23:45:41 +01:00
aefcfecd84
gnu: Add python-pytest-check-links.
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* gnu/packages/python-xyz.scm (python-pytest-check-links): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-03-26 23:45:41 +01:00
be6520e6a5
vm: Distinguish between success and failure of the guest code.
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Fixes <https://bugs.gnu.org/34276 >.
Reported by Tobias Geerinckx-Rice <me@tobias.gr>.
* gnu/system/vm.scm (expression->derivation-in-linux-vm)[loader]:
Produce '/xchg/.exit-status' file upon success.
* gnu/build/vm.scm (load-in-linux-vm): Check for 'xchg/.exit-status'
once QEMU has completed and respond accordingly.
2020-03-26 23:45:41 +01:00
60eee3e6de
gnu: Add ROPgadget.
...
* gnu/packages/cybersecurity.scm: New file.
(ropgadget): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register the file.
2020-03-26 22:53:02 +01:00
eebaed2b76
gnu: java-tomcat: Update to 8.5.53.
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This fixes CVE-2020-1938 ("Ghostcat").
* gnu/packages/web.scm (java-tomcat): Update to 8.5.53.
[properties]: Add cpe-name.
2020-03-26 21:39:49 +01:00
3089b70d76
gnu: icu4c: Explicitly add patch flags in replacement package.
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This is to prevent a build failure when this gets merged to 'core-updates'
which does not have any patch-flags to inherit.
* gnu/packages/icu4c.scm (icu4c/fixed)[source](patch-flags): New field.
2020-03-26 21:15:08 +01:00
9ea9ff6b0f
gnu: help2man: Update to 1.47.13.
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* gnu/packages/man.scm (help2man/latest): Update to 1.47.13.
2020-03-26 20:20:48 +01:00
9b0c95cc68
gnu: Add python-pywinrm.
...
* gnu/packages/python-xyz.scm (python-pywinrm): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-03-26 19:14:44 +00:00
c596359729
gnu: Add python-requests_ntlm.
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* gnu/packages/python-web.scm (python-requests_ntlm): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-03-26 19:14:44 +00:00
163997c961
gnu: Add python-ntlm-auth.
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* gnu/packages/python-crypto.scm (python-ntlm-auth): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-03-26 19:14:44 +00:00
f8dcdf2b36
gnu: Add python-kerberos.
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* gnu/packages/python-crypto.scm (python-kerberos): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
2020-03-26 19:14:44 +00:00
79c395dde3
gnu: Update sambamba to 0.7.1.
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* gnu/packages/bioinformatics.scm (sambamba): Update to 0.7.1;
Remove unneeded undead input.
2020-03-26 18:08:27 +01:00
db47adb0c7
gnu: Add 7kaa.
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* gnu/packages/games.scm (7kaa): New variable.
2020-03-26 15:55:02 +01:00
50e45d8629
gnu: boinc-client: Update to 7.16.5.
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* gnu/packages/distributed.scm (boinc-client): Update to 7.16.5.
2020-03-26 14:08:24 +02:00
f87d594238
gnu: boinc-server: Fix build.
...
* gnu/packages/distributed.scm (boinc-server)[inputs]: Replace openssl
with openssl-1.0, mariadb with mariadb:dev.
2020-03-26 14:08:24 +02:00
260eae7893
status: Display synthetic information about profiles being built.
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* guix/status.scm (print-build-event): Add 'profile case.
* guix/scripts/package.scm (build-and-use-profile): Remove now redundant
message.
2020-03-26 13:07:19 +01:00
e7570ec2da
profiles: 'profile-derivation' sets a 'type' property.
...
* guix/profiles.scm (profile-derivation): Pass #:properties to
'gexp->derivation'.
2020-03-26 13:07:19 +01:00
c7af9d0b5e
gnu: gnupg: Use ~/.guix-profile/bin/pinentry by default.
...
Fixes <https://bugs.gnu.org/24076 >.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.
* gnu/packages/patches/gnupg-default-pinentry.patch: New file.
* gnu/packages/gnupg.scm (gnupg)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-03-26 13:07:19 +01:00
315b98b9eb
gnu: youtube-viewer: Don't build gtk3 front-end.
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* gnu/packages/video.scm (youtube-viewer)[arguments]: Update
module-build-flags to only build gtk2 front-end.
2020-03-26 12:56:10 +02:00
b5a26299f7
gnu: youtube-viewer: Update to 3.7.5.
...
* gnu/packages/video.scm (youtube-viewer): Update to 3.7.5.
[inputs]: Add perl-json-xs.
2020-03-26 12:56:07 +02:00
b03ebdbc7c
tests: install: Add %test-gui-installed-desktop-os-encrypted.
...
* gnu/tests/install.scm (gui-test-program): Add a desktop? argument, and pass it to choose-services,
(installation-target-os-for-gui-tests): new procedure,
(installation-target-desktop-os-for-gui-tests): new procedure,
(guided-installation-test): add target-os and desktop? arguments. Use
target-os instead of the previous os variable. Pass desktop? argument to
gui-test-program.
(%test-gui-installed-os): Adapt accordingly,
(%test-gui-installed-os-encrypted): ditto,
(%test-gui-installed-desktop-os-encrypted): new exported variable.
2020-03-26 11:53:50 +01:00
7a1a10dbd4
installer: tests: Use a filter to select desktop-environments.
...
* gnu/installer/tests.scm (choose-services): Turn desktop-environments list
into a choose-desktop-environment procedure. This way, it is easier to select
all desktop-environments or none, in the same way as choose-network-service?
and choose-network-management-tool? arguments.
2020-03-26 11:53:50 +01:00
62c27e09f0
gnu: emacs-helm-exwm: Update to 0.0.2.
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* gnu/packages/emacs-xyz.scm (emacs-helm-exwm): Update to 0.0.2.
2020-03-26 09:00:46 +01:00
90fb592321
gnu: r-argon2: Fix case in synopsis and use full sentence in description.
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* gnu/packages/cran.scm (r-argon2)[synopsis]: Use lower case.
[description]: Use full sentence.
2020-03-26 08:28:53 +01:00
5c3902a762
gnu: r-getpass: Change case in synopsis and adjust indentation.
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* gnu/packages/cran.scm (r-getpass): Adjust indentation.
[synopsis]: Do not capitalize all words.
2020-03-26 08:28:53 +01:00
f03e62c12d
gnu: r-remoter: Fix indentation.
...
* gnu/packages/cran.scm (r-remoter): Fix indentation.
2020-03-26 08:28:53 +01:00
9bde1b1348
gnu: r-remoter: Use lower case in the synopsis.
...
* gnu/packages/cran.scm (r-remoter)[synopsis]: Do not capitalize all words.
2020-03-26 08:28:41 +01:00
730a4b10fa
gnu: linux-libre-5.4-source: Add patch to support pinebook pro.
...
* gnu/packages/patches/linux-libre-support-for-Pinebook-Pro.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/linux (linux-libre-5.4-source): Add patch.
2020-03-25 18:59:25 -07:00
2a57b72251
gnu: linux-libre: Update deblob scripts.
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* gnu/packages/linux.scm (deblob-scripts-5.4): Update to 5.4.28.
2020-03-25 20:39:05 -04:00
5cc6271d22
gnu: linux-libre: Update to 5.4.28.
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.28.
(linux-libre-5.4-pristine-source): Update hash.
2020-03-25 20:37:38 -04:00
1d777c7837
gnu: linux-libre@4.19: Update to 4.19.113.
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* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.113.
(linux-libre-4.19-pristine-source): Update hash.
2020-03-25 20:36:25 -04:00
7d57a190f6
gnu: icu4c: Fix CVE-2020-10531.
...
* gnu/packages/patches/icu4c-CVE-2020-10531.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/icu4c.scm (icu4c)[replacement]: New field.
(icu4c/fixed): New variable.
2020-03-25 17:53:59 -04:00
0c549393b9
gnu: Add r-remoter.
...
* gnu/packages/cran.scm (r-remoter): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2020-03-25 15:46:02 -04:00
6ad80b2a6b
gnu: Add r-getpass.
...
* gnu/packages/cran.scm (r-getpass): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2020-03-25 15:46:02 -04:00
49a8ef8ae1
gnu: Add r-argon2.
...
* gnu/packages/cran.scm (r-argon2): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2020-03-25 15:45:54 -04:00
0557618dbe
gnu: Add emacs-chronometrist.
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* gnu/packages/emacs-xyz.scm (emacs-chronometrist): New variable.
2020-03-25 17:34:38 +01:00
8b19fa51a4
gnu: abseil-cpp: Update to 20200225.1.
...
* gnu/packages/cpp.scm (abseil-cpp): Update to 20200225.1.
2020-03-25 16:29:26 +01:00
Jakub Kądziołka
Nicolas Goaziou
Ricardo Wurmus
Christopher Baines
Lars-Dominik Braun
Ludovic Courtès
Björn Höfling
Marius Bakke
Alexandros Theodotou
Roel Janssen
Naga Malleswari
Efraim Flashner
Mathieu Othacehe
Pierre Neidhardt
Vagrant Cascadian
Mark H Weaver
Leo Famulari
Todor Kondić