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Author SHA1 Message Date
zimoun d6fac1138f
gnu: r-scannotatr: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-scannotatr): Update to 1.4.0.
 2022-11-24 12:31:27 +01:00
zimoun 855ea2a8f1
gnu: r-rtracklayer: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.58.0.
 2022-11-24 12:31:27 +01:00
zimoun 39c52a42bd
gnu: r-rsamtools: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-rsamtools): Update to 2.14.0.
 2022-11-24 12:31:27 +01:00
zimoun a7afc50aa3
gnu: r-rhdf5filters: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.10.0.
 2022-11-24 12:31:27 +01:00
zimoun dfec056be2
gnu: r-rhdf5: Update to 2.42.0. 
* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.42.0.
 2022-11-24 12:31:26 +01:00
zimoun c45dc1e273
gnu: r-reportingtools: Update to 2.38.0. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.38.0.
 2022-11-24 12:31:26 +01:00
zimoun 607eae1e56
gnu: r-regioner: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.30.0.
 2022-11-24 12:31:26 +01:00
zimoun b7ec827477
gnu: r-rcas: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-rcas): Update to 1.24.0.
 2022-11-24 12:31:26 +01:00
zimoun 4e861e7f9a
gnu: r-rbgl: Update to 1.74.0. 
* gnu/packages/bioconductor.scm (r-rbgl): Update to 1.74.0.
 2022-11-24 12:31:26 +01:00
zimoun dd27fffd32
gnu: r-protgenerics: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-protgenerics): Update to 1.30.0.
 2022-11-24 12:31:26 +01:00
zimoun cf106821f5
gnu: r-pcamethods: Update to 1.90.0. 
* gnu/packages/bioconductor.scm (r-pcamethods): Update to 1.90.0.
 2022-11-24 12:31:26 +01:00
zimoun 34b615e3e7
gnu: r-pcaexplorer: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-pcaexplorer): Update to 2.24.0.
 2022-11-24 12:31:26 +01:00
zimoun 7c8829ae33
gnu: r-organismdbi: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.40.0.
 2022-11-24 12:31:25 +01:00
zimoun 66f1939df5
gnu: r-organism-dplyr: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-organism-dplyr): Update to 1.26.0.
 2022-11-24 12:31:25 +01:00
zimoun 0fbb12153b
gnu: r-mzr: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.32.0.
 2022-11-24 12:31:25 +01:00
zimoun 8735f10995
gnu: r-mzid: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-mzid): Update to 1.36.0.
 2022-11-24 12:31:25 +01:00
zimoun 57ae5f7196
gnu: r-msnid: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-msnid): Update to 1.32.0.
 2022-11-24 12:31:25 +01:00
zimoun 66edbf1635
gnu: r-msnbase: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.24.0.
 2022-11-24 12:31:25 +01:00
zimoun a7936348db
gnu: r-mutationalpatterns: Update to 3.8.0. 
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.8.0.
 2022-11-24 12:31:25 +01:00
zimoun cb7e5ebd54
gnu: r-muscat: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-muscat): Update to 1.12.0.
 2022-11-24 12:31:24 +01:00
zimoun fa0eda6e3f
gnu: r-methylkit: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-methylkit): Update to 1.24.0.
 2022-11-24 12:31:24 +01:00
zimoun 4fd64b03b4
gnu: r-made4: Update to 1.72.0. 
* gnu/packages/bioconductor.scm (r-made4): Update to 1.72.0.
 2022-11-24 12:31:24 +01:00
zimoun 0a699ea182
gnu: r-limma: Update to 3.54.0. 
* gnu/packages/bioconductor.scm (r-limma): Update to 3.54.0.
 2022-11-24 12:31:24 +01:00
zimoun 413f96c95f
gnu: r-lfa: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-lfa): Update to 1.28.0.
 2022-11-24 12:31:24 +01:00
zimoun 6bf50ca57a
gnu: r-keggrest: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.38.0.
 2022-11-24 12:31:24 +01:00
zimoun 1ba8e9e75c
gnu: r-interactivedisplaybase: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-interactivedisplaybase): Update to 1.36.0.
 2022-11-24 12:31:24 +01:00
zimoun aa25663162
gnu: r-impute: Update to 1.72.1. 
* gnu/packages/bioconductor.scm (r-impute): Update to 1.72.1.
 2022-11-24 12:31:23 +01:00
zimoun ce2688cd3b
gnu: r-rhtslib: Update to 2.0.0. 
* gnu/packages/bioconductor.scm (r-rhtslib): Update to 2.0.0.
 2022-11-24 12:31:23 +01:00
zimoun aa0e18c1be
gnu: r-hpar: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.40.0.
 2022-11-24 12:31:23 +01:00
zimoun 60724024de
gnu: r-gseabase: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-gseabase): Update to 1.60.0.
 2022-11-24 12:31:23 +01:00
zimoun 25c5901adc
gnu: r-gostats: Update to 2.64.0. 
* gnu/packages/bioconductor.scm (r-gostats): Update to 2.64.0.
 2022-11-24 12:31:23 +01:00
zimoun 169c0b7fa1
gnu: r-genomicranges: Update to 1.50.1. 
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.50.1.
 2022-11-24 12:31:23 +01:00
zimoun 437ad93ce7
gnu: r-genomicfiles: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.34.0.
 2022-11-24 12:31:23 +01:00
zimoun f2910e5604
gnu: r-genomicfeatures: Update to 1.50.2. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.50.2.
 2022-11-24 12:31:23 +01:00
zimoun d7e456cc13
gnu: r-genomicalignments: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.34.0.
 2022-11-24 12:31:22 +01:00
zimoun c7c3bfa250
gnu: r-genomeinfodb: Update to 1.34.3. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.34.3.
 2022-11-24 12:31:22 +01:00
zimoun 4e501fbb67
gnu: r-genomation: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.30.0.
 2022-11-24 12:31:22 +01:00
zimoun 533a3d9914
gnu: r-geneoverlap: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.34.0.
 2022-11-24 12:31:22 +01:00
zimoun b6117c1837
gnu: r-genefilter: Update to 1.80.0. 
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.80.0.
 2022-11-24 12:31:22 +01:00
zimoun 0c1edd86f2
gnu: r-gage: Update to 2.48.0. 
* gnu/packages/bioconductor.scm (r-gage): Update to 2.48.0.
 2022-11-24 12:31:22 +01:00
zimoun 3ff9f819f7
gnu: r-fastseg: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.44.0.
 2022-11-24 12:31:22 +01:00
zimoun aad9a5337c
gnu: r-ensembldb: Update to 2.22.0. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.22.0.
 2022-11-24 12:31:21 +01:00
zimoun 4eb513e7df
gnu: r-edger: Update to 3.40.0. 
* gnu/packages/bioconductor.scm (r-edger): Update to 3.40.0.
 2022-11-24 12:31:21 +01:00
zimoun bd76f479de
gnu: r-edaseq: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.32.0.
 2022-11-24 12:31:21 +01:00
zimoun 3a15509cb6
gnu: r-dittoseq: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.10.0.
 2022-11-24 12:31:21 +01:00
zimoun 0d9a766fa7
gnu: r-dirichletmultinomial: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.40.0.
 2022-11-24 12:31:21 +01:00
zimoun 1e5a6a9fb2
gnu: r-diffcyt: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.18.0.
 2022-11-24 12:31:21 +01:00
zimoun 16973c9796
gnu: r-dexseq: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.44.0.
 2022-11-24 12:31:21 +01:00
zimoun ecd3d1ca63
gnu: r-deseq2: Update to 1.38.1. 
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.38.1.
 2022-11-24 12:31:21 +01:00
zimoun 539a39c4ef
gnu: r-copywriter: Update to 2.29.0. 
* gnu/packages/bioconductor.scm (r-copywriter): Update to 2.29.0.
 2022-11-24 12:31:21 +01:00
zimoun ba197ae988
gnu: r-complexheatmap: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.14.0.
 2022-11-24 12:31:21 +01:00
zimoun bfed8f183d
gnu: r-chipseq: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.48.0.
 2022-11-24 12:31:20 +01:00
zimoun 32629c01ef
gnu: r-chipseeker: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.34.0.
 2022-11-24 12:31:20 +01:00
zimoun 9d8107b4d7
gnu: r-category: Update to 2.64.0. 
* gnu/packages/bioconductor.scm (r-category): Update to 2.64.0.
 2022-11-24 12:31:20 +01:00
zimoun bebf55cbd6
gnu: r-bsgenome: Update to 1.66.1. 
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.66.1.
 2022-11-24 12:31:20 +01:00
zimoun 3e945a87e0
gnu: r-biovizbase: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.46.0.
 2022-11-24 12:31:20 +01:00
zimoun 30f2fc13c6
gnu: r-biostrings: Update to 2.66.0. 
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.66.0.
 2022-11-24 12:31:20 +01:00
zimoun 9048d502da
gnu: r-biocparallel: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.1.
[arguments]<phases>: Update 'make-reproducible' to released files.
[propagated-inputs]: Add r-cpp11.
 2022-11-24 12:31:20 +01:00
zimoun 1ef39d3d28
gnu: r-biomart: Update to 2.54.0. 
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.54.0.
 2022-11-24 12:31:20 +01:00
zimoun a0d2db2e08
gnu: r-biobase: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-biobase): Update to 2.58.0.
 2022-11-24 12:31:20 +01:00
zimoun 822ad274c9
gnu: r-bamsignals: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.30.0.
 2022-11-24 12:31:20 +01:00
zimoun 203ddafa09
gnu: r-aroma-light: Update to 3.28.0. 
* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.28.0.
 2022-11-24 12:31:19 +01:00
zimoun c5bcfef628
gnu: r-annotationhub: Update to 3.6.0. 
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.6.0.
 2022-11-24 12:31:19 +01:00
zimoun 065fdc2bb1
gnu: r-annotationforge: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.40.0.
 2022-11-24 12:31:19 +01:00
zimoun 748599dc6b
gnu: r-annotationfilter: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.22.0.
 2022-11-24 12:31:19 +01:00
zimoun 89f6d1d425
gnu: r-annotationdbi: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.60.0.
 2022-11-24 12:31:19 +01:00
zimoun dc8c3024c0
gnu: r-annotate: Update to 1.76.0. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.76.0.
 2022-11-24 12:31:19 +01:00
zimoun 261e3c12c2
gnu: r-affxparser: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.70.0.
 2022-11-24 12:31:19 +01:00
zimoun 45c83ffbe5
gnu: r-affyio: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-affyio): Update to 1.68.0.
 2022-11-24 12:31:19 +01:00
zimoun 9947e412ac
gnu: r-affycoretools: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.70.0.
 2022-11-24 12:31:19 +01:00
zimoun 6e2871262c
gnu: r-affycontam: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.56.0.
 2022-11-24 12:31:19 +01:00
zimoun ceb39bfb39
gnu: r-affycompatible: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.58.0.
 2022-11-24 12:31:18 +01:00
zimoun 7034dcc2d6
gnu: r-affycomp: Update to 1.74.0. 
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.74.0.
 2022-11-24 12:31:18 +01:00
zimoun b7359c3b17
gnu: r-affy: Update to 1.76.0. 
* gnu/packages/bioconductor.scm (r-affy): Update to 1.76.0.
 2022-11-24 12:31:18 +01:00
zimoun 4daec4dc4d
gnu: r-isoformswitchanalyzer: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 1.20.0.
 2022-11-24 12:31:18 +01:00
zimoun cc0464f530
gnu: r-iranges: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.32.0.
 2022-11-24 12:31:18 +01:00
zimoun e73a833dd2
gnu: r-infercnv: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.14.0.
[propagated-inputs]: Remove r-leiden and r-reshape.  Add r-igraph, r-reshape2,
and r-seurat.
 2022-11-24 12:31:18 +01:00
zimoun 2564b7bcff
gnu: r-ideoviz: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.34.0.
 2022-11-24 12:31:18 +01:00
zimoun 81ba7cc732
gnu: r-bluster: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-bluster): Update to 1.8.0.
 2022-11-24 12:31:18 +01:00
zimoun de72bdab94
gnu: r-drimseq: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-drimseq): Update to 1.26.0.
 2022-11-24 12:31:17 +01:00
zimoun c7bf9a1a58
gnu: r-derfinderhelper: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-derfinderhelper): Update to 1.32.0.
 2022-11-24 12:31:17 +01:00
zimoun 2e48b8b028
gnu: r-delayedarray: Update to 0.24.0. 
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.24.0.
 2022-11-24 12:31:17 +01:00
zimoun b8f0bf3e4d
gnu: r-deepsnv: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.44.0.
 2022-11-24 12:31:17 +01:00
zimoun ef81f5f55e
gnu: r-decoupler: Update to 2.4.0. 
* gnu/packages/bioconductor.scm (r-decoupler): Update to 2.4.0.
 2022-11-24 12:31:17 +01:00
zimoun d3f0d2abe4
gnu: r-deconvr: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-deconvr): Update to 1.4.0.
 2022-11-24 12:31:17 +01:00
zimoun f7dd1e4552
gnu: r-decontam: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-decontam): Update to 1.18.0.
 2022-11-24 12:31:17 +01:00
zimoun 36c940a4d7
gnu: r-deconrnaseq: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-deconrnaseq): Update to 1.40.0.
 2022-11-24 12:31:17 +01:00
zimoun 9b717bcad9
gnu: r-decomptumor2sig: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-decomptumor2sig): Update to 2.14.0.
 2022-11-24 12:31:17 +01:00
zimoun 8fd5bbc31e
gnu: r-decomplexdisease: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-decomplexdisease): Update to 1.18.0.
 2022-11-24 12:31:17 +01:00
zimoun 483084b7f9
gnu: r-deco: Update to 1.13.0. 
* gnu/packages/bioconductor.scm (r-deco): Update to 1.13.0.
 2022-11-24 12:31:16 +01:00
zimoun bd622e1464
gnu: r-decipher: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-decipher): Update to 2.26.0.
 2022-11-24 12:31:16 +01:00
zimoun e3262cc2e1
gnu: r-debcam: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-debcam): Update to 1.16.0.
 2022-11-24 12:31:16 +01:00
zimoun 00400127ef
gnu: r-dearseq: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-dearseq): Update to 1.10.0.
[propagated-inputs]: Add r-scattermore.
 2022-11-24 12:31:16 +01:00
zimoun 3a90895228
gnu: r-damefinder: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-damefinder): Update to 1.10.0.
 2022-11-24 12:31:16 +01:00
zimoun f5118505f7
gnu: r-dama: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-dama): Update to 1.70.0.
 2022-11-24 12:31:16 +01:00
zimoun f0ed6c519c
gnu: r-cummerbund: Update to 2.40.0. 
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.40.0.
 2022-11-24 12:31:16 +01:00
zimoun 2bfc463a42
gnu: r-coverageview: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.36.0.
 2022-11-24 12:31:16 +01:00
zimoun 176e20a1f1
gnu: r-biocgenerics: Update to 0.44.0. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.44.0.
 2022-11-24 12:31:16 +01:00
zimoun 9e0e4bf347
gnu: r-biocversion: Update to 3.16.0. 
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.16.0.
 2022-11-24 12:31:15 +01:00
zimoun 6af3770787
gnu: r-barcodetrackr: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-barcodetrackr): Update to 1.6.0.
 2022-11-24 12:31:15 +01:00