9dacecb111
gnu: Update waybar to 0.9.18.
...
* gnu/packages/wm.scm (waybar): Update to 0.9.18.
2023-06-01 22:59:38 -05:00
ab4347a1ad
gnu: python-fire: Update to 0.5.0.
...
* gnu/packages/python-xyz.scm (python-fire): Update to 0.5.0.
[inputs]: Remove python-six and python-termcolor.
[propagated-inputs]: Add python-six and python-termcolor.
2023-06-01 22:59:38 -05:00
b4382b294e
gnu: Add python-colored.
...
* gnu/packages/python-xyz.scm (python-colored): New variable.
2023-06-01 20:48:17 +02:00
eb2918aa96
gnu: Add python-plotext.
...
* gnu/packages/python-xyz.scm (python-plotext): New variable.
2023-06-01 20:48:17 +02:00
d411b7d5e7
gnu: Add python-pyani.
...
* gnu/packages/bioinformatics.scm (python-pyani): New variable.
2023-06-01 20:48:17 +02:00
525ef60ff4
gnu: Add python-illumina-utils.
...
* gnu/packages/bioinformatics.scm (python-illumina-utils): New variable.
2023-06-01 20:48:17 +02:00
cf388642ce
gnu: libtommath: Honor the #:tests? flag.
...
* gnu/packages/multiprecision.scm (libtommath)[arguments]: Adjust custom
'check phase to honor the #:tests? flag.
2023-06-01 15:52:37 +03:00
b428b49d8f
gnu: libtommath: Prevent possible integer overflow.
...
* gnu/packages/multiprecision.scm (libtommath)[source]: Add patch.
* gnu/packages/patches/libtommath-integer-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2023-06-01 15:52:37 +03:00
7c52ae295b
gnu: bear: Update to 3.1.2.
...
* gnu/packages/build-tools.scm (bear): Update to 3.1.2.
2023-06-01 15:24:23 +03:00
ced6e0fe94
gnu: Add python-ete3.
...
* gnu/packages/bioinformatics.scm (python-ete3): New variable.
2023-06-01 14:10:04 +02:00
e6705f994f
gnu: parallel: Update to 20230522.
...
* gnu/packages/parallel.scm (parallel): Update to 20230522.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:55:09 +03:00
9511488941
gnu: zenity: Update to 3.44.1.
...
* gnu/packages/gnome.scm (zenity): Update to 3.44.1.
[native-inputs]: Add gtk+:bin.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:44:58 +03:00
21388dce63
gnu: iperf: Update to 3.13.
...
* gnu/packages/networking.scm (iperf): Update to 3.13.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:42:43 +03:00
3ab95b2753
gnu: iotop: Update to 1.23.
...
* gnu/packages/linux.scm (iotop): Update to 1.23.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:41:37 +03:00
fd76ffb974
gnu: html-xml-utils: Update to 8.6.
...
* gnu/packages/xml.scm (html-xml-utils): Update to 8.6.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:39:58 +03:00
e6fb7f6467
gnu: hstr: Update to 3.1.
...
* gnu/packages/shellutils.scm (hstr): Update to 3.1.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:38:13 +03:00
dc61b7fcf7
gnu: glances: Update to 3.4.0.3.
...
* gnu/packages/python-xyz.scm (glances): Update to 3.4.0.3.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:36:35 +03:00
f7d5722d36
gnu: fish: Update to 3.6.1.
...
* gnu/packages/shells.scm (fish): Update to 3.6.1.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:18:31 +03:00
247ac4b73f
gnu: fio: Update to 3.35.
...
* gnu/packages/benchmark.scm (fio): Update to 3.35.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:15:01 +03:00
dc6afa69eb
gnu: atop: Update to 2.9.0.
...
* gnu/packages/admin.scm (atop): Update to 2.9.0.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-06-01 12:13:08 +03:00
4abf0af4b1
gnu: openblas: Update make-flags comments and coding style.
...
* gnu/packages/maths.scm (openblas)[arguments]: In the make-flags use
the target-* macros. Adjust the wording describing why the different
architectures have the flags they do.
2023-06-01 11:14:03 +03:00
076688fa1e
gnu: openblas: Update architectures we provide substitutes for.
...
* gnu/packages/maths.scm (openblas)[arguments]: Adjust the substitutable?
flag to only not provide substitutes when building for powerpc-linux.
Adjust the comment accordingly.
2023-06-01 11:14:03 +03:00
872e1434f1
gnu: openblas-ilp64: Add powerpc64le-linux as a supported system.
...
* gnu/packages/maths.scm (openblas-ilp64)[supported-systems]: Add
powerpc64le-linux.
2023-06-01 11:14:03 +03:00
93804e978f
gnu: r-mbecs: Fix indentation.
...
* gnu/packages/bioconductor.scm (r-mbecs)[arguments]: Adjust indentation and
spelling of comment.
2023-06-01 09:21:57 +02:00
d019053aca
gnu: Add squashfuse.
...
* gnu/packages/file-systems.scm (squashfuse): New variable.
2023-06-01 09:15:26 +02:00
10d3f8aa7b
gnu: Add r-mbecs.
...
* gnu/packages/bioconductor.scm (r-mbecs): New variable.
2023-06-01 09:15:26 +02:00
13e2138c23
gnu: Remove linux-libre 6.2.
...
This kernel series is no longer supported upstream.
* gnu/packages/linux.scm (linux-libre-6.2-version, linux-libre-6.2-gnu-revision,
deblob-scripts-6.2, linux-libre-6.2-pristine-source, linux-libre-6.2-source,
linux-libre-headers-6.2, linux-libre-6.2): Remove variables.
* gnu/packages/aux-files/linux-libre/6.2-arm.conf,
gnu/packages/aux-files/linux-libre/6.2-arm64.conf,
gnu/packages/aux-files/linux-libre/6.2-i686.conf,
gnu/packages/aux-files/linux-libre/6.2-x86_64.conf: Delete files.
* Makefile.am (AUX_FILES): Remove them.
2023-05-31 21:21:25 -04:00
35bdf804cb
gnu: linux-libre 4.14: Update to 4.14.316.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.316.
(linux-libre-4.14-pristine-source): Update hash.
2023-05-31 21:21:25 -04:00
c428ed520d
gnu: linux-libre 4.19: Update to 4.19.284.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.284.
(linux-libre-4.19-pristine-source): Update hash.
2023-05-31 21:21:24 -04:00
1bd5d06736
gnu: linux-libre 5.4: Update to 5.4.244.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.244.
(linux-libre-5.4-pristine-source): Update hash.
2023-05-31 21:21:24 -04:00
a939d7cfee
gnu: linux-libre 5.10: Update to 5.10.181.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.181.
(linux-libre-5.10-pristine-source): Update hash.
2023-05-31 21:21:24 -04:00
9ab028e70e
gnu: linux-libre 5.15: Update to 5.15.114.
...
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.114.
(linux-libre-5.15-pristine-source): Update hash.
2023-05-31 21:21:23 -04:00
876486476a
gnu: linux-libre 6.1: Update to 6.1.31.
...
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.31.
(linux-libre-6.1-pristine-source): Update hash.
2023-05-31 21:21:23 -04:00
7576eff1bf
gnu: linux-libre: Update to 6.3.5.
...
* gnu/packages/linux.scm (linux-libre-6.3-version): Update to 6.3.5.
(linux-libre-6.3-pristine-source): Update hash.
2023-05-31 21:21:12 -04:00
9f7cd1fcaf
gnu: Add updater input properties for R and Python packages.
...
* gnu/packages/cran.scm (r-glue, r-xfun, r-vctrs)
(r-lifecycle): Turn comment about r-knitr into 'properties' field.
* gnu/packages/mpi.scm (python-mpi4py)[properties]: New field.
2023-05-31 23:26:12 +02:00
6ea2e1105a
gnu: r-desctools: Update to 0.99.49.
...
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.49.
[propagated-inputs]: Add r-withr.
2023-05-31 18:19:55 +02:00
df71989159
gnu: r-rrcov: Update to 1.7-3.
...
* gnu/packages/statistics.scm (r-rrcov): Update to 1.7-3.
2023-05-31 18:19:55 +02:00
e2bc0cb1b4
gnu: r-rcpparmadillo: Update to 0.12.4.0.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.4.0.0.
2023-05-31 18:19:55 +02:00
ecae6c08fb
gnu: r-knitr: Update to 1.43.
...
* gnu/packages/statistics.scm (r-knitr): Update to 1.43.
2023-05-31 18:19:55 +02:00
ef8d938f7b
gnu: r-markdown: Update to 1.7.
...
* gnu/packages/statistics.scm (r-markdown): Update to 1.7.
2023-05-31 18:19:55 +02:00
232b2530b8
gnu: r-matrix: Update to 1.5-4.1.
...
* gnu/packages/statistics.scm (r-matrix): Update to 1.5-4.1.
2023-05-31 18:19:55 +02:00
1c2d80a2f9
gnu: r-cartogram: Update to 0.3.0.
...
* gnu/packages/cran.scm (r-cartogram): Update to 0.3.0.
2023-05-31 18:19:55 +02:00
112afc5979
gnu: r-zoib: Update to 1.6.
...
* gnu/packages/cran.scm (r-zoib): Update to 1.6.
2023-05-31 18:19:55 +02:00
a713d1b90e
gnu: r-crul: Update to 1.4.0.
...
* gnu/packages/cran.scm (r-crul): Update to 1.4.0.
2023-05-31 18:19:55 +02:00
4560bd6f51
gnu: r-dismo: Update to 1.3-14.
...
* gnu/packages/cran.scm (r-dismo): Update to 1.3-14.
2023-05-31 18:19:55 +02:00
131db17bd5
gnu: r-rgeos: Update to 0.6-3.
...
* gnu/packages/cran.scm (r-rgeos): Update to 0.6-3.
2023-05-31 18:19:55 +02:00
0268d10d13
gnu: r-tzdb: Update to 0.4.0.
...
* gnu/packages/cran.scm (r-tzdb): Update to 0.4.0.
2023-05-31 18:19:55 +02:00
44f3470a7d
gnu: r-lwgeom: Update to 0.2-13.
...
* gnu/packages/cran.scm (r-lwgeom): Update to 0.2-13.
2023-05-31 18:19:55 +02:00
5be4640724
gnu: r-mlr3pipelines: Update to 0.5.0-1.
...
* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.5.0-1.
[native-inputs]: Add r-knitr.
2023-05-31 18:19:55 +02:00
12adca4654
gnu: r-mlr3misc: Update to 0.12.0.
...
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.12.0.
2023-05-31 18:19:55 +02:00
jgart
Ricardo Wurmus
Efraim Flashner
Andy Tai
Greg Hogan
Mădălin Ionel Patrașcu
Leo Famulari
Ludovic Courtès