me
/
guix
Archived
1
0
Fork 0
Code
126,537 Commits
1 Branch
0 Tags
410 MiB
Commit Graph

4299 Commits (a5c7ceda0a47b205ea675b86e9e1fd095b6b8313)

Author SHA1 Message Date
Ricardo Wurmus 221b9422fc
gnu: r-abn: Update to 3.0.2. 
* gnu/packages/bioconductor.scm (r-abn): Update to 3.0.2.

Change-Id: Icf3de104b61e79b9a7c9fbfecb0e071d6e46ef9d
 2023-10-31 21:57:58 +01:00
Mădălin Ionel Patrașcu a0a377fdd6
gnu: Add r-radiogx. 
* gnu/packages/bioconductor.scm (r-radiogx): New variable.

Change-Id: I8fd06a18bd68f9a3baa2cc129d62aef06528bc97
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu 7170720e48
gnu: Add r-coregx. 
* gnu/packages/bioconductor.scm (r-coregx): New variable.

Change-Id: Ib54ba3c7bebdcc90748d4e4b0b2ce63b7f0fc1b8
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu e8cd556a7c
gnu: Add r-piano. 
* gnu/packages/bioconductor.scm (r-piano): New variable.

Change-Id: I1bc2387563510c47614748423a3b510adc0486aa
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu 192514e869
gnu: Add r-r4rna. 
* gnu/packages/bioconductor.scm (r-r4rna): New variable.

Change-Id: I1bde2a17b0ba4a97fa54161744f048dbfaf2217a
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu d24c1078d2
gnu: Add r-r3cseq. 
* gnu/packages/bioconductor.scm (r-r3cseq): New variable.

Change-Id: Ib62db1415ef3988ccef88ad600192246964b4d84
 2023-10-31 13:58:08 +01:00
Ricardo Wurmus 04cef141c4
gnu: r-metap: Update to 1.9. 
* gnu/packages/bioconductor.scm (r-metap): Update to 1.9.

Change-Id: I60ad521bf4a02505f5bafd3c3b0641395a15c308
 2023-10-25 16:58:40 +02:00
Ricardo Wurmus 5326f0c76e
gnu: r-biomartr: Update to 1.0.6. 
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.6.

Change-Id: Ifdbc61ef9b34aee441524ea15f0b5a7dfdd76052
 2023-10-25 16:58:40 +02:00
Afkhami, Navid 21b44bbc7c
gnu: Add r-mafh5-gnomad-v3-1-2-grch38. 
* gnu/packages/bioconductor.scm (r-mafh5-gnomad-v3-1-2-grch38): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-13 14:42:16 +02:00
Ricardo Wurmus b4f2b681ad
gnu: Add r-chemmineob. 
* gnu/packages/bioconductor.scm (r-chemmineob): New variable.
 2023-10-11 15:44:06 +02:00
Ricardo Wurmus 591ffaede3
gnu: r-abn: Update to 3.0.1. 
* gnu/packages/bioconductor.scm (r-abn): Update to 3.0.1.
 2023-10-09 22:44:47 +02:00
Ricardo Wurmus e97e708958
gnu: r-biomvrcns: Patch R constants. 
* gnu/packages/bioconductor.scm (r-biomvrcns)[arguments]: Add phase
'patch-constants.
 2023-10-06 08:55:11 +02:00
Ricardo Wurmus c64777cfe0
gnu: r-activepathways: Update to 2.0.2. 
* gnu/packages/bioconductor.scm (r-activepathways): Update to 2.0.2.
 2023-10-05 15:16:26 +02:00
Ricardo Wurmus f1259b80be
gnu: r-valr: Update to 0.7.0. 
* gnu/packages/bioconductor.scm (r-valr): Update to 0.7.0.
[propagated-inputs]: Add r-lifecycle.
 2023-10-05 15:16:26 +02:00
Ricardo Wurmus 8c22cc96f0
gnu: r-biomartr: Update to 1.0.5. 
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.5.
 2023-10-05 15:16:26 +02:00
Ricardo Wurmus d841c23dc5
gnu: r-tximeta: Update to 1.18.3. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.3.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus b53f7a87b2
gnu: r-biodb: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.8.1.
[propagated-inputs]: Add r-git2r.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus bf7c049147
gnu: r-gviz: Update to 1.44.2. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.2.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus 9220702479
gnu: r-s4vectors: Update to 0.38.2. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.2.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus 6492c6496b
gnu: r-biocstyle: Update to 2.28.1. 
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.28.1.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus 27fd2d2c2a
gnu: r-yapsa: Update to 1.26.8. 
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.26.8.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus 6a1b46e7ab
gnu: r-enrichplot: Update to 1.20.3. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.20.3.
[propagated-inputs]: Add r-ggfun.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus 3f3c986001
gnu: r-spectra: Update to 1.10.3. 
* gnu/packages/bioconductor.scm (r-spectra): Update to 1.10.3.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus b82dc9b724
gnu: r-keggrest: Update to 1.40.1. 
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.40.1.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus b56dabc7a3
gnu: r-genomeinfodb: Update to 1.36.4. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.4.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus 28b2b7c367
gnu: r-ensembldb: Update to 2.24.1. 
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.24.1.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus fefad76048
gnu: r-ancombc: Update to 2.2.2. 
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.2.
 2023-10-05 10:23:27 +02:00
Ricardo Wurmus caf9f847ef
gnu: r-omnipathr: Update to 3.8.2. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.8.2.
 2023-10-05 10:23:27 +02:00
Mădălin Ionel Patrașcu 273ee56bc2
gnu: Add r-arrayquality. 
* gnu/packages/bioconductor.scm (r-arrayquality): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 4edacf416b
gnu: Add r-arraymvout. 
* gnu/packages/bioconductor.scm (r-arraymvout): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 4221c3d4da
gnu: Add r-parody. 
* gnu/packages/bioconductor.scm (r-parody): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu b84f6c2c0e
gnu: Add r-mdqc. 
* gnu/packages/bioconductor.scm (r-mdqc): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 9f08080b38
gnu: Add r-apcomplex. 
* gnu/packages/bioconductor.scm (r-apcomplex): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu e65ba1ccee
gnu: Add r-org-sc-sgd-db. 
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 1025316d80
gnu: Add r-hybridmtest. 
* gnu/packages/bioconductor.scm (r-hybridmtest): New variable.
 2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 58a3333f58
gnu: Add r-anota2seq. 
* gnu/packages/bioconductor.scm (r-anota2seq): New variable.
 2023-10-04 11:03:23 +02:00
Ricardo Wurmus cf5cb0875b
gnu: r-delayedmatrixstats: Update to 1.22.6. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.22.6.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus c8e7ea8a8b
gnu: r-rhdf5lib: Update to 1.22.1. 
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.22.1.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus ebaf944cdd
gnu: r-s4arrays: Update to 1.0.6. 
* gnu/packages/bioconductor.scm (r-s4arrays): Update to 1.0.6.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 9232ef7986
gnu: r-clusterprofiler: Update to 4.8.3. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.8.3.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 8cfd6e804a
gnu: r-greylistchip: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-greylistchip): Update to 1.32.1.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 8fe9e14917
gnu: r-tcgautils: Update to 1.20.4. 
* gnu/packages/bioconductor.scm (r-tcgautils): Update to 1.20.4.
[propagated-inputs]: Add r-biocbaseutils.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 7f983fb730
gnu: r-shinymethyl: Update to 1.36.1. 
* gnu/packages/bioconductor.scm (r-shinymethyl): Update to 1.36.1.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus a1245f559d
gnu: r-genomicdatacommons: Update to 1.24.3. 
* gnu/packages/bioconductor.scm (r-genomicdatacommons): Update to 1.24.3.
[propagated-inputs]: Add r-tidyr.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus 6e06c0032c
gnu: r-genomeinfodb: Update to 1.36.3. 
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.3.
 2023-09-14 08:57:24 +02:00
Ricardo Wurmus bf9cd9521a
gnu: r-htscluster: Update to 2.0.11. 
* gnu/packages/bioconductor.scm (r-htscluster): Update to 2.0.11.
 2023-09-14 00:04:05 +02:00
Ricardo Wurmus 8f59ac151f
gnu: r-abn: Update to 3.0.0. 
* gnu/packages/bioconductor.scm (r-abn): Update to 3.0.0.
[propagated-inputs]: Add r-mclogit and r-stringi.
 2023-09-13 23:14:38 +02:00
Navid Afkhami cda20190bc
gnu: Add r-interactivedisplay. 
* gnu/packages/bioconductor.scm (r-interactivedisplay): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-09-13 12:10:06 +02:00
Navid Afkhami 8c0c94bf9f
gnu: Add r-trackviewer. 
* gnu/packages/bioconductor.scm (r-trackviewer): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-09-02 11:55:23 +02:00
Ricardo Wurmus 3335903d7d
gnu: r-tximeta: Update to 1.18.1. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.1.
 2023-08-28 22:15:47 +02:00