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Author SHA1 Message Date
Ricardo Wurmus 4d0861d307
gnu: r-mlr3misc: Update to 0.13.0.
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.13.0.
2023-10-05 15:16:29 +02:00
Ricardo Wurmus 1d7dfe2f8d
gnu: r-seurat: Update to 4.4.0.
* gnu/packages/cran.scm (r-seurat): Update to 4.4.0.
[propagated-inputs]: Add r-purrr.
2023-10-05 15:16:29 +02:00
Ricardo Wurmus f7b4b14d49
gnu: r-seuratobject: Update to 4.1.4.
* gnu/packages/cran.scm (r-seuratobject): Update to 4.1.4.
2023-10-05 15:16:29 +02:00
Ricardo Wurmus 9703a303f6
gnu: r-metafor: Update to 4.4-0.
* gnu/packages/cran.scm (r-metafor): Update to 4.4-0.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 509ad5c498
gnu: r-brms: Update to 2.20.4.
* gnu/packages/cran.scm (r-brms): Update to 2.20.4.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 2bcbcea451
gnu: r-projpred: Update to 2.7.0.
* gnu/packages/cran.scm (r-projpred): Update to 2.7.0.
[propagated-inputs]: Add r-gtools.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus d1f4bc7ae1
gnu: r-rstanarm: Update to 2.26.1.
* gnu/packages/cran.scm (r-rstanarm): Update to 2.26.1.
[propagated-inputs]: Add r-posterior.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus ee4d8fabbb
gnu: r-rsconnect: Update to 1.1.1.
* gnu/packages/cran.scm (r-rsconnect): Update to 1.1.1.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus b5fc66d0ec
gnu: r-erm: Update to 1.0-4.
* gnu/packages/cran.scm (r-erm): Update to 1.0-4.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 250f6b92f7
gnu: r-kutils: Update to 1.73.
* gnu/packages/cran.scm (r-kutils): Update to 1.73.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 5767e3f443
gnu: r-rsvg: Update to 2.5.0.
* gnu/packages/cran.scm (r-rsvg): Update to 2.5.0.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 4aef0d05e1
gnu: r-caretensemble: Update to 2.0.3.
* gnu/packages/cran.scm (r-caretensemble): Update to 2.0.3.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 09a189941a
gnu: r-seewave: Update to 2.2.2.
* gnu/packages/cran.scm (r-seewave): Update to 2.2.2.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus b37735ec76
gnu: r-gamlss: Update to 5.4-20.
* gnu/packages/cran.scm (r-gamlss): Update to 5.4-20.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 0f08f438c0
gnu: r-parameters: Update to 0.21.2.
* gnu/packages/cran.scm (r-parameters): Update to 0.21.2.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 03cec4ae27
gnu: r-graphlayouts: Update to 1.0.1.
* gnu/packages/cran.scm (r-graphlayouts): Update to 1.0.1.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 0025676cbe
gnu: r-clue: Update to 0.3-65.
* gnu/packages/cran.scm (r-clue): Update to 0.3-65.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 486d1f8613
gnu: r-sctransform: Update to 0.4.0.
* gnu/packages/cran.scm (r-sctransform): Update to 0.4.0.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus e20c61e8ab
gnu: r-arrow: Update to 13.0.0.1.
* gnu/packages/cran.scm (r-arrow): Update to 13.0.0.1.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 0910fe7048
gnu: r-ggfun: Update to 0.1.3.
* gnu/packages/cran.scm (r-ggfun): Update to 0.1.3.
[propagated-inputs]: Add r-cli.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 52a2028760
gnu: r-europepmc: Update to 0.4.3.
* gnu/packages/cran.scm (r-europepmc): Update to 0.4.3.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 60df6d63d7
gnu: r-polyclip: Update to 1.10-6.
* gnu/packages/cran.scm (r-polyclip): Update to 1.10-6.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 103260da87
gnu: r-yulab-utils: Update to 0.1.0.
* gnu/packages/cran.scm (r-yulab-utils): Update to 0.1.0.
[propagated-inputs]: Add r-cli, r-digest, and r-fs.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 1a2fac04b4
gnu: r-osqp: Update to 0.6.3.1.
* gnu/packages/cran.scm (r-osqp): Update to 0.6.3.1.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 3a7e7842de
gnu: r-units: Update to 0.8-4.
* gnu/packages/cran.scm (r-units): Update to 0.8-4.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus f66abe6a17
gnu: r-apcluster: Update to 1.4.11.
* gnu/packages/cran.scm (r-apcluster): Update to 1.4.11.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 0e29b39b49
gnu: r-bayesm: Update to 3.1-6.
* gnu/packages/cran.scm (r-bayesm): Update to 3.1-6.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 3f9381c2e5
gnu: r-iso: Update to 0.0-21.
* gnu/packages/cran.scm (r-iso): Update to 0.0-21.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 9494ac4edd
gnu: r-gridpattern: Update to 1.1.0.
* gnu/packages/cran.scm (r-gridpattern): Update to 1.1.0.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus cc7ba0ef28
gnu: r-qmri: Update to 1.2.7.
* gnu/packages/cran.scm (r-qmri): Update to 1.2.7.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 6eca8ff183
gnu: r-waffle: Update to 1.0.2.
* gnu/packages/cran.scm (r-waffle): Update to 1.0.2.
[propagated-inputs]: Add r-curl, r-dt, r-htmlwidgets, r-plyr, r-rlang, and r-stringr.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 8372038fc4
gnu: r-sodium: Update to 1.3.0.
* gnu/packages/cran.scm (r-sodium): Update to 1.3.0.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus 03de1715ea
gnu: r-activity: Update to 1.3.4.
* gnu/packages/cran.scm (r-activity): Update to 1.3.4.
2023-10-05 15:16:28 +02:00
Ricardo Wurmus ab2d831a0e
gnu: r-rcpphnsw: Update to 0.5.0.
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.5.0.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus f8d59b3c58
gnu: r-rcppalgos: Update to 2.8.2.
* gnu/packages/cran.scm (r-rcppalgos): Update to 2.8.2.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 09c2b23bf9
gnu: r-gert: Update to 2.0.0.
* gnu/packages/cran.scm (r-gert): Update to 2.0.0.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 7eb383815f
gnu: r-effectsize: Update to 0.8.6.
* gnu/packages/cran.scm (r-effectsize): Update to 0.8.6.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 6049a5ce62
gnu: r-coin: Update to 1.4-3.
* gnu/packages/cran.scm (r-coin): Update to 1.4-3.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus ee76d53dd8
gnu: r-libcoin: Update to 1.0-10.
* gnu/packages/cran.scm (r-libcoin): Update to 1.0-10.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus f87c1c1016
gnu: r-tarchetypes: Update to 0.7.9.
* gnu/packages/cran.scm (r-tarchetypes): Update to 0.7.9.
[propagated-inputs]: Remove r-furrr, r-future, and r-future-callr.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 7141b41835
gnu: r-magick: Update to 2.8.0.
* gnu/packages/cran.scm (r-magick): Update to 2.8.0.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 6e74d7c1ee
gnu: r-abctools: Update to 1.1.7.
* gnu/packages/cran.scm (r-abctools): Update to 1.1.7.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus f9e8fdcbfe
gnu: r-rootsolve: Update to 1.8.2.4.
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.4.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus d3751cac6d
gnu: r-doby: Update to 4.6.19.
* gnu/packages/cran.scm (r-doby): Update to 4.6.19.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus d1884a7225
gnu: r-getopt: Update to 1.20.4.
* gnu/packages/cran.scm (r-getopt): Update to 1.20.4.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus f7d86f00e1
gnu: r-nodbi: Update to 0.9.8.
* gnu/packages/cran.scm (r-nodbi): Update to 0.9.8.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 40f51a15eb
gnu: r-insight: Update to 0.19.5.
* gnu/packages/cran.scm (r-insight): Update to 0.19.5.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 5dac9674d4
gnu: r-pupillometryr: Update to 0.0.5.
* gnu/packages/cran.scm (r-pupillometryr): Update to 0.0.5.
[propagated-inputs]: Remove r-data-table and r-lazyeval; add r-stringr.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus de4c0a2564
gnu: r-billboarder: Update to 0.4.1.
* gnu/packages/cran.scm (r-billboarder): Update to 0.4.1.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus b372a2c8c2
gnu: r-learnr: Update to 0.11.5.
* gnu/packages/cran.scm (r-learnr): Update to 0.11.5.
[native-inputs]: Add esbuild.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 7694563fa1
gnu: r-renv: Update to 1.0.3.
* gnu/packages/cran.scm (r-renv): Update to 1.0.3.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 15688b1c96
gnu: r-rio: Update to 1.0.1.
* gnu/packages/cran.scm (r-rio): Update to 1.0.1.
[propagated-inputs]: Remove r-openxlsx; add r-lifecycle, r-r-utils, r-stringi, and
r-writexl.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 66e46a0260
gnu: r-import: Update to 1.3.1.
* gnu/packages/cran.scm (r-import): Update to 1.3.1.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 42f5162f60
gnu: r-tinytex: Update to 0.47.
* gnu/packages/cran.scm (r-tinytex): Update to 0.47.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus df888839a1
gnu: r-psych: Update to 2.3.9.
* gnu/packages/cran.scm (r-psych): Update to 2.3.9.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 7f51c3790f
gnu: r-rmysql: Update to 0.10.26.
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.26.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 994a8523be
gnu: r-limsolve: Update to 1.5.7.
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.7.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus e234cecc9e
gnu: r-lamw: Update to 2.2.1.
* gnu/packages/cran.scm (r-lamw): Update to 2.2.1.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 50f7b875a9
gnu: r-sp: Update to 2.1-0.
* gnu/packages/cran.scm (r-sp): Update to 2.1-0.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 9aa7e46c86
gnu: r-prettyunits: Update to 1.2.0.
* gnu/packages/cran.scm (r-prettyunits): Update to 1.2.0.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 47b8f2165a
gnu: r-ctrdata: Update to 1.15.2.
* gnu/packages/cran.scm (r-ctrdata): Update to 1.15.2.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 5b0a691bfa
gnu: r-pkgload: Update to 1.3.3.
* gnu/packages/cran.scm (r-pkgload): Update to 1.3.3.
[propagated-inputs]: Add r-pkgbuild.
2023-10-05 15:16:27 +02:00
Ricardo Wurmus 1fc6c1d2ab
gnu: r-gensa: Update to 1.1.10.1.
* gnu/packages/cran.scm (r-gensa): Update to 1.1.10.1.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus 5cac6f401c
gnu: r-d3r: Update to 1.1.0.
* gnu/packages/cran.scm (r-d3r): Update to 1.1.0.
[propagated-inputs]: Remove r-rlang.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus cb8c68da4b
gnu: r-jqr: Update to 1.3.0.
* gnu/packages/cran.scm (r-jqr): Update to 1.3.0.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus 92fce36949
gnu: r-curl: Update to 5.1.0.
* gnu/packages/cran.scm (r-curl): Update to 5.1.0.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus 4d9908cd61
gnu: r-jade: Update to 2.0-4.
* gnu/packages/cran.scm (r-jade): Update to 2.0-4.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus 6d2df3bd9e
gnu: r-gunifrac: Update to 1.8.
* gnu/packages/cran.scm (r-gunifrac): Update to 1.8.
[propagated-inputs]: Add r-inline.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus fa97d8c2d0
gnu: r-ggstatsplot: Update to 0.12.1.
* gnu/packages/cran.scm (r-ggstatsplot): Update to 0.12.1.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus b253dbe7a0
gnu: r-datawizard: Update to 0.9.0.
* gnu/packages/cran.scm (r-datawizard): Update to 0.9.0.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus c64777cfe0
gnu: r-activepathways: Update to 2.0.2.
* gnu/packages/bioconductor.scm (r-activepathways): Update to 2.0.2.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus f1259b80be
gnu: r-valr: Update to 0.7.0.
* gnu/packages/bioconductor.scm (r-valr): Update to 0.7.0.
[propagated-inputs]: Add r-lifecycle.
2023-10-05 15:16:26 +02:00
Ricardo Wurmus 8c22cc96f0
gnu: r-biomartr: Update to 1.0.5.
* gnu/packages/bioconductor.scm (r-biomartr): Update to 1.0.5.
2023-10-05 15:16:26 +02:00
Andrew Tropin eeb7132ec3
gnu: emacs-telega: Update to 0.8.03-1.17bfa50.
* gnu/packages/emacs-xyz.scm (emacs-telega-server): Update to
0.8.03-1.17bfa50.
2023-10-05 14:16:39 +04:00
Andrew Tropin 9e963c9d75
gnu: tdlib: Update to 1.8.16-0.4d1d22d.
* gnu/packages/messaging.scm (tdlib): Update to 1.8.16-0.4d1d22d.
2023-10-05 14:16:38 +04:00
Ricardo Wurmus 276b9287c1
gnu: r-aplot: Update to 0.2.1.
* gnu/packages/cran.scm (r-aplot): Update to 0.2.1.
2023-10-05 10:31:09 +02:00
Ricardo Wurmus d841c23dc5
gnu: r-tximeta: Update to 1.18.3.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.18.3.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus b53f7a87b2
gnu: r-biodb: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.8.1.
[propagated-inputs]: Add r-git2r.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus bf7c049147
gnu: r-gviz: Update to 1.44.2.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.44.2.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus 9220702479
gnu: r-s4vectors: Update to 0.38.2.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.38.2.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus 6492c6496b
gnu: r-biocstyle: Update to 2.28.1.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.28.1.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus 27fd2d2c2a
gnu: r-yapsa: Update to 1.26.8.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.26.8.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus 6a1b46e7ab
gnu: r-enrichplot: Update to 1.20.3.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.20.3.
[propagated-inputs]: Add r-ggfun.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus 3f3c986001
gnu: r-spectra: Update to 1.10.3.
* gnu/packages/bioconductor.scm (r-spectra): Update to 1.10.3.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus b82dc9b724
gnu: r-keggrest: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.40.1.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus b56dabc7a3
gnu: r-genomeinfodb: Update to 1.36.4.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.36.4.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus 28b2b7c367
gnu: r-ensembldb: Update to 2.24.1.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.24.1.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus fefad76048
gnu: r-ancombc: Update to 2.2.2.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.2.2.
2023-10-05 10:23:27 +02:00
Ricardo Wurmus caf9f847ef
gnu: r-omnipathr: Update to 3.8.2.
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.8.2.
2023-10-05 10:23:27 +02:00
Liliana Marie Prikler 759b55712e
gnu: curl: Update to 8.3.0.
According to upstream, the current version has 19 security issues.
See also <https://curl.se/docs/vuln-7.85.0.html>.

* gnu/packages/curl.scm (curl/fixed): New variable.
(curl): Use it as replacement.
2023-10-05 09:41:31 +02:00
Efraim Flashner a31725ff90
gnu: openjdk-10: Fix building on aarch64-linux.
* gnu/packages/java.scm (openjdk-10)[arguments]: Replace inherited
'patch-for-aarch64 phase for changes in source code layout.

Co-authored-by: Christopher Baines <mail@cbaines.net>
Co-authored-by: Tim Johann <t1m@phrogstar.de>
2023-10-05 09:54:04 +03:00
Efraim Flashner 6f8f98f334
gnu: universal-ctags: Update to 6.0.20231001.0.
* gnu/packages/code.scm (universal-ctags): Update to 6.0.20231001.0.
2023-10-05 09:54:04 +03:00
Kjartan Oli Agustsson c3f47bb2ee
gnu: tree-sitter-java: Update to 0.20.1.
* gnu/packages/tree-sitter.scm (tree-sitter-java): Update to 0.20.1.

Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-10-05 09:54:23 +04:00
Maxim Cournoyer ecb1b335d4
gnu: emacs-elpy: Update to 1.35.0-2.7ff8ffa.
* gnu/packages/emacs-xyz.scm (emacs-elpy): Update to 1.35.0-2.7ff8ffa.
[origin]: Apply patch.
[arguments]: Disable a new test in the disable-broken-tests phase.
* gnu/packages/patches/emacs-elpy-dup-test-name.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2023-10-05 01:34:21 -04:00
Maxim Cournoyer 22d2f94eb2
gnu: phoronix-test-suite: Do not propagate gcc-toolchain.
* gnu/packages/benchmark.scm (gcc-toolchain*): Replace gcc-toolchain-12
reference with gcc-toolchain.
* gnu/packages/benchmark.scm (phoronix-test-suite): Augment wrap-binary phase
with GCC variables.
[propagated-inputs]: Delete field, moving gcc-toolchain to...
[inputs]: ... here.
[search-paths]: New field.
2023-10-04 23:30:42 -04:00
John Kehayias 20df2ee697
gnu: libxpm: Graft with 3.5.17 [security fixes].
Fixes CVE-2023-43788 and CVE-2023-43789.  See the X.Org security advisory
<https://lists.x.org/archives/xorg/2023-October/061506.html> for more
information.

* gnu/packages/xorg.scm (libxpm)[replacement]: New field, set to ...
(libxpm/fixed): ... this new variable.
2023-10-04 18:46:22 -04:00
John Kehayias b317eb8a9e
gnu: libx11: Update replacement to 1.8.7 [security fixes].
Fixes CVE-2023-43785, CVE-2023-43786, and CVE-2023-43787.  See the X.Org
security advisory <https://lists.x.org/archives/xorg/2023-October/061506.html>
for more information.

* gnu/packages/xorg.scm (libx11-fixed): Update to 1.8.7.
2023-10-04 17:57:13 -04:00
Maxim Cournoyer de8fc548c6
gnu: emacs-debbugs: Preserve subject when replying to patch threads.
* gnu/packages/patches/emacs-debbugs-keep-patch-subject.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs-xyz.scm (emacs-debbugs) [origin]: Use it.
2023-10-04 16:32:45 -04:00
David Elsing e718647930
gnu: Remove suitesparse-3.
* gnu/packages/maths.scm (suitesparse-3): Delete variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-04 17:59:03 +03:00
David Elsing 151687a7a2
gnu: scilab: Update to 2023.1.0.
* gnu/packages/maths.scm (scilab): Update to 2023.1.0.
[source] Use git-fetch.
<modules>: Add (guix build utils) and (ice-9 ftw).
<patches>: Add patch for hdf5 >= 1.10.
<snippet>: Move contents of the "scilab" directory to its parents. Remove
the other files and autogenerated files.
[native-inputs]: Add autoconf, autoconf-archive, automake, bison, eigen, flex,
libtool, ocaml and ocaml-findlib.
[inputs]: Add ocaml-num, replace hdf5-1.8 by hdf5-1.14 and suitesparse-3 by
suitesparse.
[arguments]: Remove quasiquote. Add --enable-build-parser,
--with-eigen-include=..., OCAMLC=... and OCAMLOPT=... to #:configure-flags.
<#:phases>: Add fix-ocaml-num, remove-desktop-files,
bootstrap-dynamic_link-scripts and build-parsers phases. Remove fixes for
compilation and linker errors from the pre-build phase.
[home-page]: Update URL.
[description]: Add two spaces between sentences.
[license]: Update to gpl2 and bsd-3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-04 17:58:22 +03:00
Andy Tai 37d0befca0
gnu: parallel: Update to 20230922.
* gnu/packages/parallel.scm (parallel): Update to 20230922.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-04 17:25:46 +03:00
Timotej Lazar 264baefa88
gnu: freerdp: Update to 2.11.2.
* gnu/packages/rdesktop.scm (freerdp): Update to 2.11.2.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-04 15:09:26 +02:00
Ekaitz Zarraga c1af4060e9
gnu: guile-mastodon: Update to 0.0.1-0a94ae6b
Message-ID: <0064c4ff9262c4906131909ae1276667033f8811.1696343806.git.ekaitz@elenq.tech>
From: Ekaitz Zarraga <ekaitz@elenq.tech>
Date: Tue, 3 Oct 2023 16:28:58 +0200
Subject: [PATCH] gnu: guile-mastodon: Update to 0.0.1-0a94ae6b

* gnu/packages/guile-xyz.scm (guile-mastodon): Update to 0.0.1-0a94ae6b

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-04 15:05:24 +02:00
Peter Polidoro 06e53c577e
gnu: kicad: Update to 7.0.8.
* gnu/packages/engineering.scm (kicad): Update to 7.0.8.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-10-04 15:03:00 +02:00
Jonathan Brielmaier 4a99dd7322
gnu: ultrastar-deluxe: Update to 2023.9.0.
* gnu/packages/games.scm (ultrastar-deluxe): Update to 2023.9.0.
[source]: Use tagged version again.

Tested-by: Jonathan Brielmaier <jonathan.brielmaier@web.de>
2023-10-04 13:45:55 +02:00
Mădălin Ionel Patrașcu 5f2704517c
gnu: r-dofuture: Add r-markdown.
* gnu/packages/cran.scm (r-dofuture)[native-inputs]: Add r-markdown.
2023-10-04 11:21:52 +02:00
Mădălin Ionel Patrașcu 273ee56bc2
gnu: Add r-arrayquality.
* gnu/packages/bioconductor.scm (r-arrayquality): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 4edacf416b
gnu: Add r-arraymvout.
* gnu/packages/bioconductor.scm (r-arraymvout): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 4221c3d4da
gnu: Add r-parody.
* gnu/packages/bioconductor.scm (r-parody): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu b84f6c2c0e
gnu: Add r-mdqc.
* gnu/packages/bioconductor.scm (r-mdqc): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 9f08080b38
gnu: Add r-apcomplex.
* gnu/packages/bioconductor.scm (r-apcomplex): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu e65ba1ccee
gnu: Add r-org-sc-sgd-db.
* gnu/packages/bioconductor.scm (r-org-sc-sgd-db): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 1025316d80
gnu: Add r-hybridmtest.
* gnu/packages/bioconductor.scm (r-hybridmtest): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu f989150083
gnu: Add r-repmis.
* gnu/packages/cran.scm (r-repmis): New variable.
2023-10-04 11:03:23 +02:00
Mădălin Ionel Patrașcu 58a3333f58
gnu: Add r-anota2seq.
* gnu/packages/bioconductor.scm (r-anota2seq): New variable.
2023-10-04 11:03:23 +02:00
Nicolas Goaziou d0aaa5aacf
gnu: emacs-yeetube: Update to 2.0.5.
* gnu/packages/emacs-xyz.scm (emacs-yeetube): Update to 2.0.5.
[arguments]<#:phases>: Update variable names holding executable locations.
2023-10-04 10:58:33 +02:00
Nicolas Goaziou d3021c4538
gnu: emacs-yaml-mode: Update to 0.0.16.
* gnu/packages/emacs-xyz.scm (emacs-yaml-mode): Update to 0.0.16.
2023-10-04 10:58:33 +02:00
Nicolas Goaziou b346b93d41
gnu: emacs-org-dynamic-agenda: Update to 0.3.1.
* gnu/packages/emacs-xyz.scm (emacs-org-dynamic-agenda): Update to 0.3.1.
2023-10-04 10:58:33 +02:00
Nicolas Goaziou e576f2ac3b
gnu: emacs-irony-mode: Update to 1.6.0.
* gnu/packages/emacs-xyz.scm (emacs-irony-mode): Update to 1.6.0.
2023-10-04 10:58:32 +02:00
Nicolas Goaziou 43741bca58
gnu: emacs-eldoc-box: Update to 1.11.1.
* gnu/packages/emacs-xyz.scm (emacs-eldoc-box): Update to 1.11.1.
2023-10-04 10:58:32 +02:00
Nicolas Goaziou 27e27cb3b6
gnu: emacs-corfu-terminal: Update to 0.7.
* gnu/packages/emacs-xyz.scm (emacs-corfu-terminal): Update to 0.7.
2023-10-04 10:58:32 +02:00
Nicolas Goaziou 71b5fdea89
gnu: emacs-clj-refactor: Update to 3.9.4.
* gnu/packages/emacs-xyz.scm (emacs-clj-refactor): Update to 3.9.4.
2023-10-04 10:58:32 +02:00
Charles 24fc0370d0
gnu: Add cl-ini.
* gnu/packages/lisp-xyz.scm (sbcl-cl-ini, ecl-cl-ini, cl-ini): New variables.
2023-10-03 20:54:40 -05:00
fanquake 0c6198319a
gnu: Add python-altgraph.
* gnu/packages/python-xyz.scm (python-altgraph): New variable.

Co-authored-by: jgart <jgart@dismail.de>
2023-10-03 20:46:05 -05:00
Nicolas Goaziou 8e6022732a
gnu: emacs-yeetube: Improve package style.
* gnu/packages/emacs-xyz.scm (emacs-yeetube): Fix indentation.
[synopsis, description]: Use Texinfo markup.  Add proper capitalization.
2023-10-03 22:09:33 +02:00
Nicolas Goaziou 761cc5ae23
gnu: emacs-yeetube: Use executables from inputs.
* gnu/packages/emacs-xyz.scm (emacs-yeetube)[arguments]: Set locations for
"mpv" and "yt-dlp" executables from the store instead of relying on `executable-find'.
2023-10-03 22:09:33 +02:00
Nicolas Goaziou 81fea9f445
gnu: emacs-yeetube: Update to 2.0.4.
* gnu/packages/emacs-xyz.scm (emacs-yeetube): Update to 2.0.4.
[source]<origin>: Update URI.
[home-page]: Update it, too.
2023-10-03 22:09:33 +02:00
Nicolas Goaziou b5ac2e1350
gnu: emacs-yaml: Update to 0.5.4.
* gnu/packages/emacs-xyz.scm (emacs-yaml): Update to 0.5.4.
2023-10-03 22:09:33 +02:00
Nicolas Goaziou 1e0db9b966
gnu: emacs-web-mode: Update to 17.3.13.
* gnu/packages/emacs-xyz.scm (emacs-web-mode): Update to 17.3.13.
2023-10-03 22:09:32 +02:00
Nicolas Goaziou dfeac7e477
gnu: emacs-tree-inspector: Update to 0.4.
* gnu/packages/emacs-xyz.scm (emacs-tree-inspector): Update to 0.4.
[arguments]<#:phases>: Require `subr-x' library in order to prevent a test
failure (and probably a run-time failure) when `hash-table-keys' is called.
2023-10-03 22:09:32 +02:00
Nicolas Goaziou b6f274eeac
gnu: emacs-pg: Update to 0.24.
* gnu/packages/emacs-xyz.scm (emacs-pg): Update to 0.24.
2023-10-03 22:09:32 +02:00
Nicolas Goaziou 8463cc2efb
gnu: emacs-parseedn: Update to 1.2.0.
* gnu/packages/emacs-xyz.scm (emacs-parseedn): Update to 1.2.0.
2023-10-03 22:09:32 +02:00
Nicolas Goaziou cc09b0ebfe
gnu: emacs-org-super-agenda: Use G-expressions.
* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda)[arguments]: Use G-expressions.
2023-10-03 22:09:31 +02:00
Nicolas Goaziou 805505b600
gnu: emacs-org-super-agenda: Run tests.
* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda)[arguments]<#:tests?>:
Set to #TRUE.
<#:phases>: Re-instate two previously failing tests, skip a new one.
2023-10-03 22:09:31 +02:00
Nicolas Goaziou 7947feb090
gnu: emacs-org-super-agenda: Update to 1.3.
* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda): Update to 1.3.
2023-10-03 22:09:31 +02:00
Nicolas Goaziou 8d6111953e
gnu: emacs-org-re-reveal: Update to 3.23.0.
* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): Update to 3.23.0.
2023-10-03 22:09:31 +02:00
Nicolas Goaziou 415b4b8601
gnu: emacs-org-ql: Update to 0.7.2.
* gnu/packages/emacs-xyz.scm (emacs-org-ql): Update to 0.7.2.
[native-inputs]: Add EMACS-XR.
2023-10-03 22:09:31 +02:00
Nicolas Goaziou 8915d468d4
gnu: emacs-modus-themes: Update to 4.3.0.
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 4.3.0.
2023-10-03 22:09:30 +02:00
Nicolas Goaziou 1de94ae941
gnu: emacs-mct: Update to 1.0.0.
* gnu/packages/emacs-xyz.scm (emacs-mct): Update to 1.0.0.
2023-10-03 22:09:30 +02:00
Nicolas Goaziou 397a0d8ac2
gnu: emacs-logview: Update to 0.17.1.
* gnu/packages/emacs-xyz.scm (emacs-logview): Update to 0.17.1.
2023-10-03 22:09:30 +02:00
Nicolas Goaziou 1ac4d87818
gnu: emacs-jinx: Update to 0.9.
* gnu/packages/emacs-xyz.scm (emacs-jinx): Update to 0.9.
2023-10-03 22:09:30 +02:00
Nicolas Goaziou 7e9825300c
gnu: emacs-inspector: Update to 0.36.
* gnu/packages/emacs-xyz.scm (emacs-inspector): Update to 0.36.
2023-10-03 22:09:30 +02:00
Nicolas Goaziou 4830e3d722
gnu: emacs-inf-ruby: Update to 2.8.0.
* gnu/packages/emacs-xyz.scm (emacs-inf-ruby): Update to 2.8.0.
2023-10-03 22:09:29 +02:00
Nicolas Goaziou c4ec00b6b8
gnu: emacs-helm: Update to 3.9.5.
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.9.5.
2023-10-03 22:09:29 +02:00
Nicolas Goaziou 6b8abbb118
gnu: emacs-fountain-mode: Update to 3.6.3.
* gnu/packages/emacs-xyz.scm (emacs-fountain-mode): Update to 3.6.3.
2023-10-03 22:09:29 +02:00
Nicolas Goaziou af71e08589
gnu: emacs-extmap: Update to 1.3.
* gnu/packages/emacs-xyz.scm (emacs-extmap): Update to 1.3.
2023-10-03 22:09:29 +02:00
Nicolas Goaziou 63f51e0cf5
gnu: emacs-ement: Update to 0.13.
* gnu/packages/emacs-xyz.scm (emacs-ement): Update to 0.13.
2023-10-03 22:09:28 +02:00
Nicolas Goaziou ee4e9dc21f
gnu: emacs-embark: Update to 0.23.
* gnu/packages/emacs-xyz.scm (emacs-embark): Update to 0.23.
2023-10-03 22:09:28 +02:00
Nicolas Goaziou d50278116d
gnu: emacs-elfeed-protocol: Update to 0.9.0.
* gnu/packages/emacs-xyz.scm (emacs-elfeed-protocol): Update to 0.9.0.
2023-10-03 22:09:28 +02:00
Nicolas Goaziou c6f27febfc
gnu: emacs-ebuild-mode: Update to 1.67.
* gnu/packages/emacs-xyz.scm (emacs-ebuild-mode): Update to 1.67.
2023-10-03 22:09:28 +02:00
Nicolas Goaziou 2b39c78b4e
gnu: emacs-dtrt-indent: Update to 1.15.
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): Update to 1.15.
2023-10-03 22:09:28 +02:00
Nicolas Goaziou ff44d11e3b
gnu: emacs-dracula-theme: Update to 1.8.1.
* gnu/packages/emacs-xyz.scm (emacs-dracula-theme): Update to 1.8.1.
2023-10-03 22:09:27 +02:00
Nicolas Goaziou 668f5e0eeb
gnu: emacs-datetime: Update to 0.9.1.
* gnu/packages/emacs-xyz.scm (emacs-datetime): Update to 0.9.1.
2023-10-03 22:09:27 +02:00
Nicolas Goaziou 69ceab87d4
gnu: emacs-company-emoji: Update to 2.8.0.
* gnu/packages/emacs-xyz.scm (emacs-company-emoji): Update to 2.8.0.
2023-10-03 22:09:27 +02:00
Nicolas Goaziou 81ba1bd524
gnu: emacs-clojure-mode: Update to 5.17.0.
* gnu/packages/emacs-xyz.scm (emacs-clojure-mode): Update to 5.17.0.
2023-10-03 22:09:27 +02:00
Nicolas Goaziou d8ff8fcf50
gnu: emacs-bm: Run tests.
* gnu/packages/emacs-xyz.scm (emacs-bm)[arguments]: Run tests.
2023-10-03 22:09:27 +02:00
Nicolas Goaziou 01ff058d5e
gnu: emacs-bm: Update to 202309.
* gnu/packages/emacs-xyz.scm (emacs-bm): Update to 202309.
2023-10-03 22:09:26 +02:00
Nicolas Goaziou 4007f4f317
gnu: emacs-subed: Update to 1.2.4.
* gnu/packages/emacs-xyz.scm (emacs-subed): Update to 1.2.4.
2023-10-03 22:09:26 +02:00
Nicolas Goaziou d1e75f7289
gnu: emacs-seq: Update to 2.24.
* gnu/packages/emacs-xyz.scm (emacs-seq): Update to 2.24.
2023-10-03 22:09:26 +02:00
Nicolas Goaziou daf02c5760
gnu: emacs-ebdb: Update to 0.8.18.
* gnu/packages/emacs-xyz.scm (emacs-ebdb): Update to 0.8.18.
2023-10-03 22:09:26 +02:00
Nicolas Goaziou a8e0ff78e5
gnu: emacs-tramp: Update to 2.6.1.3.
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.6.1.3.
2023-10-03 22:09:25 +02:00
Nicolas Goaziou 026e28712b
gnu: emacs-pyim: Update to 5.3.3.
* gnu/packages/emacs-xyz.scm (emacs-pyim): Update to 5.3.3.
[propagated-inputs]: Remove EMACS-POPUP.
2023-10-03 22:09:25 +02:00
Nicolas Goaziou 2576dd1778
gnu: emacs-denote-menu: Update to 1.2.0.
* gnu/packages/emacs-xyz.scm (emacs-denote-menu): Update to 1.2.0.
2023-10-03 22:09:25 +02:00
Nicolas Goaziou a3d3e05aca
gnu: emacs-stream: Update to 2.3.0.
* gnu/packages/emacs-xyz.scm (emacs-stream): Update to 2.3.0.
2023-10-03 22:09:25 +02:00
Nicolas Goaziou 078b12a576
gnu: emacs-mmm-mode: Update to 0.5.10.
* gnu/packages/emacs-xyz.scm (emacs-mmm-mode): Update to 0.5.10.
2023-10-03 22:09:25 +02:00
Nicolas Goaziou 34412094ca
gnu: emacs-project: Update to 0.10.0.
* gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.10.0.
2023-10-03 22:09:24 +02:00
Mark H Weaver f3b907c168
gnu: icecat: Update to 115.3.1-guix0-preview1 [fixes CVE-2023-5217].
* gnu/packages/gnuzilla.scm (%icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
2023-10-03 15:43:24 -04:00
Efraim Flashner 8d47bfb5d6
gnu: gama: Update to 2.26.
* gnu/packages/gps.scm (gama): Update to 2.26.
2023-10-03 21:37:18 +03:00
John Kehayias fc8306af67
gnu: steam-devices-udev-rules: Update to 1.0.0.61-1.1344348.
* gnu/packages/games.scm (steam-devices-udev-rules): Update to
1.0.0.61-1.1344348.
2023-10-03 14:11:46 -04:00
John Kehayias d66806f5fc
gnu: openvr: Update to 1.26.7.
* gnu/packages/game-development.scm (openvr): Update to 1.26.7.
2023-10-03 14:08:56 -04:00
John Kehayias fb9acf4220
gnu: headsetcontrol: Update to 2.7.0.
* gnu/packages/hardware.scm (headsetcontrol): Update to 2.7.0.
2023-10-03 14:06:45 -04:00
Hilton Chain 449e09c909
gnu: Add rust-path-slash-0.2.
* gnu/packages/crates-io.scm (rust-path-slash-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-10-03 20:22:40 +03:00
Efraim Flashner 73fda55125
gnu: alacritty: Remove input labels.
* gnu/packages/terminals.scm (alacritty)[native-inputs]: Remove input
labels.
[inputs]: Same.
2023-10-03 19:56:22 +03:00
Efraim Flashner 1899d997c2
gnu: alacritty: Patch references to more libraries.
* gnu/packages/terminals.scm (alacritty)[arguments]: Also patch paths to
X libraries in 'add-absolute-library-references phase.
[inputs]: Add libxext, libxft, libxinerama, libxmu, libxpresent,
libxscrnsaver, libxt, libxtst.
2023-10-03 19:53:51 +03:00
Efraim Flashner 998c9122d3
gnu: alacritty: Update to 0.12.3.
* gnu/packages/terminals.scm (alacritty): Update to 0.12.3.
[arguments]: Remove cargo-test-flags.
2023-10-03 19:23:22 +03:00
Attila Lendvai 284f8508be
gnu: trezord: Use new format for native-inputs.
* gnu/packages/finance.scm (trezord)[native-inputs]: Remove labels.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-03 16:02:02 +02:00
Attila Lendvai a90bb1d302
gnu: trezord: Update to 2.0.33.
* gnu/packages/finance.scm (trezord): Update to 2.0.33.
  [arguments]: Specify go-1.20 as the compiler.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-03 16:02:02 +02:00
Attila Lendvai 476c38c53a
gnu: trezor-agent: Fix build, change versioning scheme.
Clarify the versioning of the package in a comment, so that later updates will
not pick the wrong version number.

* gnu/packages/finance.scm (trezor-agent)[version]: Copy version from
  python-trezor-agent which effectively updates it from 0.14.4 to 0.14.7.
  [source]: Copy the origin also from python-trezor-agent to effectively sync
  the source and the version of the two packages; something that upstream will
  also do in future releases. Update snippet.
  [native-inputs]: Add missing python-bech32 and python-simple-rlp so that the
  test suite runs clean and the build finishes.
  [arguments]: Reenable 'sanity-check' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-03 16:02:02 +02:00
Attila Lendvai 75aff50fce
gnu: python-trezor-agent: Update to 0.14.7.
* gnu/packages/finance.scm (python-trezor-agent): Update to 0.14.7.
  [native-inputs]: Add python-bech32 and python-cryptography.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-03 16:02:02 +02:00
Attila Lendvai ed363d6ddb
gnu: python-trezor: Update to 0.13.7.
* gnu/packages/finance.scm (python-trezor): Update to 0.13.7.
  [propagated-inputs]: Drop python-click-7 kludge, add
  python-construct-classes instead of python-construct.
  [native-inputs]: Add python-pillow, python-simple-rlp and python-wheel.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-03 16:02:02 +02:00
Attila Lendvai 8036852533
gnu: Add python-construct-classes.
* gnu/packages/python-xyz.scm (python-construct-classes): New variable.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-10-03 16:02:02 +02:00
Guillaume Le Vaillant 61810fd973
gnu: gr-osmosdr: Update to 0.2.4.
* gnu/packages/radio.scm (gr-osmosdr): Update to 0.2.4.
2023-10-03 16:02:02 +02:00
Hilton Chain a71232b2c5
Revert "gnu: emacs-buttercup: Fix native comp tests with emacs-next."
This reverts commit e45f9b4b12, which doesn't
fix the test issue.
2023-10-03 20:25:53 +08:00
Hilton Chain 99a46ecb26
gnu: spectre-meltdown-checker: Update to 0.46.
* gnu/packages/patches/spectre-meltdown-checker-externalize-fwdb.patch: Update
patch.
* gnu/packages/patches/spectre-meltdown-checker-find-kernel.patch: Delete file
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/linux.scm (spectre-meltdown-checker): Update to 0.46.
[#:phases]<fixpath>: Correct name for bunzip2.
Substitute lzop and mktemp as well.
2023-10-03 20:21:42 +08:00
Hilton Chain 5f81d31aa4
gnu: font-lxgw-wenkai-tc: Update to 1.010.
* gnu/packages/fonts.scm (font-lxgw-wenkai-tc): Update to 1.010.
2023-10-03 20:21:10 +08:00
Hilton Chain cc9e24ca03
gnu: font-lxgw-wenkai: Update to 1.310.
* gnu/packages/fonts.scm (font-lxgw-wenkai): Update to 1.310.
2023-10-03 20:20:59 +08:00
Hilton Chain 0951f2a2c2
gnu: font-sarasa-gothic: Update to 0.42.1.
* gnu/packages/fonts.scm (font-sarasa-gothic): Update to 0.42.1.
2023-10-03 20:20:45 +08:00
Hilton Chain d6555049fd
gnu: font-chiron-hei-hk: Update to 2.508.
* gnu/packages/fonts.scm (font-chiron-hei-hk): Update to 2.508.
2023-10-03 20:20:28 +08:00
Vinicius Monego 789a8538d6
gnu: shotcut: Update to 23.09.29.
* gnu/packages/video.scm (shotcut): Update to 23.09.29.
2023-10-03 08:50:41 -03:00
Vinicius Monego c2291c8b28
gnu: mlt: Update to 7.20.0.
* gnu/packages/video.scm (mlt): Update to 7.20.0.
2023-10-03 08:50:41 -03:00
Vinicius Monego 350b812a22
gnu: python-scikit-rf: Update to 0.29.1.
* gnu/packages/engineering.scm (python-scikit-rf): Update to 0.29.1.
[native-inputs]: Add python-pytest-mock.
2023-10-03 08:50:41 -03:00
Guillaume Le Vaillant d69c557d64
gnu: satdump: Add support for BladeRF.
* gnu/packages/radio.scm (satdump)[inputs]: Add bladerf.
2023-10-03 09:50:33 +02:00
Guillaume Le Vaillant 26a3fc8449
gnu: urh: Add support for Airspy and BladeRF.
* gnu/packages/radio.scm (urh)[inputs]: Add airspy and bladerf.
2023-10-03 09:50:33 +02:00
Guillaume Le Vaillant 4f1365a263
gnu: sdr++: Add support for BladeRF.
* gnu/packages/radio.scm (sdr++)[inputs]: Add bladerf.
  [arguments]: Update 'configure-flags'.
2023-10-03 09:50:33 +02:00
Guillaume Le Vaillant 6c012137d8
gnu: sdrangel: Add support for BladeRF.
* gnu/packages/radio.scm (sdrangel)[inputs]: Add bladerf.
2023-10-03 09:50:33 +02:00
Guillaume Le Vaillant d1ed2ce12c
gnu: dump1090: Add support for BladeRF.
* gnu/packages/radio.scm (dump1090)[inputs]: Add bladerf.
  [arguments]: Update 'make-flags'.
2023-10-03 09:50:32 +02:00
Guillaume Le Vaillant e788923600
gnu: gr-osmosdr: Add support for BladeRF and IQ balance correction.
* gnu/packages/radio.scm (gr-osmosdr)[inputs]: Add bladerf and gr-iqbal.
  [arguments]: Add 'fix-gnuradio-iqbalance-detection' phase. Use gexp.
2023-10-03 09:50:32 +02:00
Guillaume Le Vaillant 18ee78a999
gnu: Add soapybladerf.
* gnu/packages/radio.scm (soapybladerf): New variable.
2023-10-03 09:50:32 +02:00
Guillaume Le Vaillant ee7296ff47
gnu: Add bladerf.
* gnu/packages/radio.scm (bladerf): New variable.
2023-10-03 09:50:32 +02:00
Liliana Marie Prikler 7d134b57b7
Merge branch 'master' into gnome-team 2023-09-30 11:54:32 +02:00
Simon South ee5de9cdf2
gnu: sdcc: Update to 4.3.0.
* gnu/packages/embedded.scm (sdcc): Update to 4.3.0.
* gnu/packages/patches/sdcc-disable-non-free-code.patch: Update to match new
version.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:32:01 +01:00
Simon South a97d032c7b
gnu: sdcc: Embed absolute reference to μCsim.
* gnu/packages/embedded.scm (sdcc)[arguments]<#:phases>: Add
"embed-absolute-ucsim-reference" phase.
[inputs]: Add ucsim.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:32:01 +01:00
Simon South 5605e4db17
gnu: sdcc: Adjust format.
* gnu/packages/embedded.scm (sdcc): Move arguments above inputs; punctuate
comments consistently.
[arguments]<#:configure-flags>: Move comment regarding GPUTILS to associated
flags; add comment for "--disable-ucsim".
[home-page]: Add trailing slash to URL.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:32:01 +01:00
Simon South 76c4ecc2dd
gnu: sdcc: Update package style.
* gnu/packages/embedded.scm (sdcc)[source]<snippet>: Use gexp; drop
trailing #t.
[arguments]: Use gexps.
<#:phases>: Drop trailing #t from phase.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:32:01 +01:00
Hilton Chain 367f0317d9
gnu: utfcpp: Update to 3.2.5.
* gnu/packages/textutils.scm (utfcpp): Update to 3.2.5.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:31:27 +01:00
Hilton Chain 697406fef7
gnu: libglvnd: Update to 1.7.0.
* gnu/packages/gl.scm (libglvnd): Update to 1.7.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:31:09 +01:00
Hilton Chain 371ddde311
gnu: picard: Update to 2.9.2.
* gnu/packages/music.scm (picard): Update to 2.9.2.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:30:53 +01:00
Hilton Chain 7c92356adf
gnu: font-sarasa-gothic: Update to 0.42.0.
* gnu/packages/fonts.scm (font-sarasa-gothic): Update to 0.42.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:30:40 +01:00
David Elsing d78bbb912c
gnu: hdf-eos5: Update to 2.0.
* gnu/packages/maths.scm (hdf-eos5): Update to 2.0.
[source]: Change URL and add snippet to remove generated files.
[native-inputs]: Add autoconf, automake and libtool.
[inputs]: Replace hdf5-1.8 with hdf5-1.14.
[arguments]: Do not use quasiquote and add the phases
remove-single-module-flag and fix-parallel-tests.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-09-30 10:29:59 +01:00
Liliana Marie Prikler b18b2d1348
Merge branch 'master' into gnome-team 2023-09-24 12:19:01 +02:00
Liliana Marie Prikler 35fd25af9b
Merge branch 'emacs-team' 2023-09-24 09:24:36 +02:00
Hilton Chain b268842ec4
gnu: psautohint: Disable flaky tests.
* gnu/packages/fontutils.scm (psautohint)[arguments]: Disable tests
test_hashmap_no_version and test_hashmap_old_version.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Hilton Chain 848db3c718
gnu: phantomsocks: Update to 0.0.0-20230829023258-013a0002abe2.
* gnu/packages/networking.scm (phantomsocks): Update to
0.0.0-20230829023258-013a0002abe2.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Rostislav Svoboda 4528fd6bbe
gnu: xsel: Document clipboard functionality.
* gnu/packages/xdisorg.scm (xsel)[synopsis, description]:
Note the X clipboard as an option.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Hilton Chain eb1c3fff20
gnu: Remove emacs-buttercup-1.25.
* gnu/packages/emacs-xyz.scm (emacs-buttercup-1.25): Delete variable.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Hilton Chain 3c3dfaab85
gnu: emacs-lua-mode: Build with newer emacs-buttercup.
* gnu/packages/emacs-xyz (emacs-lua-mode)[native-inputs]: Replace
emacs-buttercup-1.25 with emacs-buttercup.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice b2ab38cd82
gnu: libvpx: Graft to fix CVE-2023-5217.
* gnu/packages/video.scm (libvpx)[replacement]: New field, set to…
(libvpx/fixed): …this new variable.
* gnu/packages/patches/libvpx-CVE-2023-5217.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2023-09-24 02:00:00 +02:00
Hilton Chain via Guix-patches via 79abbaf4e4
gnu: qbittorrent-enhanced: Update to 4.5.5.10.
* gnu/packages/bittorrent.scm (qbittorrent-enhanced): Update to 4.5.5.10.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 13bb3d8bea
gnu: qbittorrent-nox: Rename to qbittorrent-no-x.
* gnu/packages/bittorrent.scm (qbittorrent-no-x): New variable, renamed from…
(qbittorrent-nox): …this package, now redefined as a DEPRECATED-PACKAGE.
2023-09-24 02:00:00 +02:00
Hilton Chain ab8c774191
gnu: qbittorrent: Update to 4.5.5.
* gnu/packages/bittorrent.scm (qbittorrent): Update to 4.5.5.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-09-24 02:00:00 +02:00
Ludovic Courtès c4886c0cb6
gnu: guix: Fix cross-compilation.
Fixes a regression introduced in
59587e2fda where ./configure would fail
when cross-compiling with “Git is missing”.

Reported by gabber on #guix.

* gnu/packages/package-management.scm (guix)[arguments]: Add
‘ac_cv_path_GIT’ to #:configure-flags.
2023-09-29 11:41:20 +02:00
Tobias Geerinckx-Rice 1b0ec97bce
gnu: xen: Build reproducibly
* gnu/packages/virtualization.scm (xen)[source]: Add patches.
[arguments]: Add a new 'remove-cruft phase.
* gnu/packages/patches/xen-docs-use-predictable-ordering.patch,
* gnu/packages/patches/xen-remove-config.gz-timestamp.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them both.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice d471465624
gnu: xen: Build in parallel.
I was unable to trigger any additional irreproducibility.
If you can, please disable PARRALLEL-BUILD? instead.

* gnu/packages/virtualization.scm (xen)[arguments]: Remove hard-coded
‘-j 1’ from the #:make-flags.  Honour PARALLEL-BUILD? in the 'build
phase.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 91097713ee
gnu: xen: Update package style.
* gnu/packages/virtualization.scm (xen)
[arguments]: Rewrite as G-expressions.  Use SEARCH-INPUT-FILE whenever
possible.  Put SUBSTITUTE* features to use.
[native-inputs, inputs]: Remove input labels.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 11f1d72dd8
gnu: xen: Update to 4.14.6.
* gnu/packages/virtualization.scm (xen): Update to 4.14.6.
[arguments]: Remove obsolete quoting work-around for old bug.
Don't explicitly return #t from phases.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice d7abe56433
gnu: xen: Version the mini-os checkout.
* gnu/packages/virtualization.scm (xen)[native-inputs]: Add the Xen name
and version to the ‘…-mini-os-git-checkout’ store file name.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice bd4761e01e
gnu: qemu: Update to 8.1.1.
* gnu/packages/virtualization.scm (qemu): Update to 8.1.1.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice df7c91785c
gnu: imgp: Update to 2.9.
* gnu/packages/image.scm (imgp): Update to 2.9.
[arguments]: Don't explicitly return #t from phases.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 63efa203d3
gnu: erofs-utils: Update to 1.7.
* gnu/packages/linux.scm (erofs-utils): Update to 1.7.
[inputs]: Add zlib.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 2a0aedc297
gnu: python-srsly: Update to 2.4.8.
* gnu/packages/python-xyz.scm (python-srsly): Update to 2.4.8.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice a4ccc473a3
gnu: remmina: Update to 1.4.32.
* gnu/packages/vnc.scm (remmina): Update to 1.4.32.
[source]: Add ‘.git’ suffix to silence needless HTTP redirection.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 4a8c51c7be
gnu: hplip: Update to 3.23.8.
* gnu/packages/cups.scm (hplip): Update to 3.23.8.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 64e49f9668
gnu: onedrive: Update to 2.4.25.
* gnu/packages/sync.scm (onedrive): Update to 2.4.25.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 41bb9bdbeb
gnu: mlterm: Update to 3.9.3.
* gnu/packages/terminals.scm (mlterm): Update to 3.9.3.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 2022cc9e98
gnu: kcov: Clean up build phase.
* gnu/packages/code.scm (kcov)[arguments]: Use SEARCH-INPUT-FILE and
remove a vestigial LET from the 'fix-/bin/bash-references phase.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice b7789fb9e1
gnu: kcov: Update to 42.
* gnu/packages/code.scm (kcov): Update to 42.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 8a5dfdccf8
gnu: libjcat: Update to 0.1.14.
* gnu/packages/compression.scm (libjcat): Update to 0.1.14.
2023-09-24 02:00:00 +02:00
Efraim Flashner 36094ba021
gnu: just: Install shell completions.
* gnu/packages/rust-apps.scm (just)[arguments]: Add a phase to install
the shell completions.
2023-09-28 21:17:20 +03:00
Efraim Flashner 5b18971348
gnu: just: Install manpage.
* gnu/packages/rust-apps.scm (just)[arguments]: Add phase to install
manpage.
2023-09-28 21:17:20 +03:00
Andrew Jose 970fb81c62
gnu: Add just.
* gnu/packages/rust-apps.scm (just): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:20 +03:00
Andrew Jose 66c18d23da
gnu: Add rust-temptree-0.2.
* gnu/packages/crates-io.scm (rust-temptree-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:20 +03:00
Andrew Jose 87a216a516
gnu: Add rust-target-2.
* gnu/packages/crates-io.scm (rust-target-2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:19 +03:00
Andrew Jose 7c8d00b5dd
gnu: Add rust-cradle-0.2.
* gnu/packages/crates-io.scm (rust-cradle-0.2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:19 +03:00
Andrew Jose 188730c17c
gnu: Add rust-dotenvy-0.15.
* gnu/packages/crates-io.scm (rust-dotenvy-0.15): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:19 +03:00
Andrew Jose 27b64d3efa
gnu: Add rust-strum-0.24.
* gnu/packages/crates-io.scm (rust-strum-0.24, rust-strum-macros-0.24):
New variables.
(rust-strum-0.21): inherit from rust-strum-0.24.
(rust-strum-macros-0.21): inherit from rust-strum-macros-0.24.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:19 +03:00
Andrew Jose 2f46ffd3ae
gnu: Add rust-lexiclean-0.0.1.
* gnu/packages/crates-io.scm (rust-lexiclean-0.0.1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:19 +03:00
Andrew Jose 429294d95a
gnu: Add rust-snafu-0.7.
* gnu/packages/crates-io.scm (rust-snafu-0.7): New variable.
(rust-snafu-0.6): Inherit from rust-snafu-0.7.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:19 +03:00
Andrew Jose dd77ec804f
gnu: Add rust-snafu-derive-0.7.
* gnu/packages/crates-io.scm (rust-snafu-derive-0.7): New variable.
(rust-snafu-derive-0.6): Inherit from rust-snafu-derive-0.7.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:18 +03:00
Andrew Jose 5ede6e8661
gnu: Add rust-executable-path-1.
* gnu/packages/crates-io.scm (rust-executable-path-1): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 21:17:18 +03:00
Hilton Chain aa69d140d3
gnu: Add gcc-toolchain-13.
* gnu/packages/commencement.scm (gcc-toolchain-13): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 19:42:48 +03:00
Hilton Chain 54da3d2c2e
gnu: Add gcc-13.
* gnu/packages/gcc.scm (gcc-13): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 19:39:55 +03:00
altadil f5040becbf
gnu: Add pantheon-terminal.
* gnu/packages/pantheon.scm (pantheon-terminal): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 19:33:20 +03:00
altadil fc0bd1c38d
gnu: Add granite-6.
* gnu/packages/pantheon.scm (granite-6): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 19:33:20 +03:00
Bruno Victal f99ace331f
gnu: mympd: Update to 12.0.2.
* gnu/packages/mpd.scm (mympd): Update to 12.0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 18:51:56 +03:00
Timotej Lazar 509239b368
gnu: keepassxc: Switch to qt-build-system.
* gnu/packages/password-utils.scm (keepassxc): Use qt-build-system.
[build-system]: Switch to qt-build-system.
[arguments]: Drop superfluous phase and modules.
[inputs]: Drop qtbase-5.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-09-28 18:48:47 +03:00
Efraim Flashner 3963fa1a46
gnu: julia-arraylayouts: Fix building on more architectures.
* gnu/packages/julia-xyz.scm (julia-arraylayouts)[arguments]: When not
building for x86_64-linux add a phase to mark a test broken.
2023-09-28 14:25:22 +03:00
Efraim Flashner 790f68653e
gnu: julia-bandedmatrices: Fix compatibility with openblas64.
* gnu/packages/julia-xyz.scm (julia-bandedmatrices)[source]: Add snippet
to backport patch to correctly refer to libblas and liblapack.
2023-09-28 13:48:32 +03:00
Efraim Flashner 6ba5e21e3a
gnu: julia-arraylayouts: Update to 0.8.18.
* gnu/packages/julia-xyz.scm (julia-arraylayouts): Update to 0.8.18.
2023-09-28 13:48:32 +03:00
Efraim Flashner 3a27d6178b
gnu: julia-genericlinearalgebra: Update to 0.3.0.
* gnu/packages/julia-xyz.scm (julia-genericlinearalgebra): Update to 0.3.0.
[arguments]: Remove custom 'adjust-test-suite phase.
2023-09-28 13:48:32 +03:00
Simon Tournier 14bf81748b
gnu: julia-wcslib-jll: Downgrade wcslib version.
The package julia-wcs does not support version higher than 7.x.

* gnu/packages/julia-jll.scm (julia-wcslib-jll)[inputs]: Replace wcslib by
wcslib-7.12.
2023-09-28 13:48:32 +03:00
Simon Tournier 23bf7cba07
gnu: Add wcslib-7.12.
* gnu/packages/astronomy.scm (wcslib-7.12): New variable.
2023-09-28 13:48:32 +03:00
Simon Tournier be7d68f08b
gnu: julia-scanbyte: Update to 0.4.0.
* gnu/packages/julia-xyz.scm (julia-scanbyte): Update to 0.4.0.
2023-09-28 13:48:32 +03:00
Simon Tournier 434bb0a4db
gnu: julia-arraylayouts: Fix tests.
* gnu/packages/julia-xyz.scm (julia-arraylayouts)[arguments]: Remove.
2023-09-28 13:48:32 +03:00
Efraim Flashner 16bc2f3609
gnu: julia: Conditionally use openblas with ILP64 support.
Fixes <https://bugs.gnu.org/63986>.
Reported by Cayetano Santos <csantosb@inventati.org>.

* gnu/packages/julia.scm (julia)[arguments]<#:phases>: Conditionally use
OpenBLAS with ILP64 support for x86-64 target.
<#:make-flags>: Likewise.
[inputs]: Conditionally replace openblas by openblas-ilp64 for x86-64 target.

Co-authored-by: Simon Tournier <zimon.toutoune@gmail.com>
2023-09-28 13:48:32 +03:00
Efraim Flashner a473d562ff
gnu: openblas-ilp64: Add symbol suffix.
* gnu/packages/maths.scm (openblas-ilp64)[arguments]<#:make-flags>: Add the
symbol '64_' as suffix.
2023-09-28 13:48:31 +03:00
Efraim Flashner 2b1ae1cffc
gnu: emacs-elfeed: Patch curl executable.
Reported by bienjensu on IRC.

* gnu/packages/emacs-xyz.scm (emacs-elfeed)[arguments]: Add a phase to
patch a call to the curl binary.
[inputs]: Add curl.
2023-09-28 13:48:31 +03:00
Jean-Pierre De Jesus DIAZ 6fa85076ae
gnu: fulcrum: Update to 1.9.1.
* gnu/packages/finance.scm (fulcrum): Use the upstream origin instead of
  the Flowee's fork of it, updates and expands the synopsis and
  description.  Updates the package to 1.9.1 and build without any
  bundled libraries with the help of a patch.
* gnu/packages/patches/fulcrum-1.9.1-unbundled-libraries.patch: New
  patch.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:10 +02:00
Jean-Pierre De Jesus DIAZ 04e90035b8
gnu: Add simdjson 0.6.
* gnu/packages/cpp.scm (simdjson-0.6): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:10 +02:00
Jean-Pierre De Jesus DIAZ 700e4e8a42
gnu: Add robin-hood-hashing.
* gnu/packages/cpp.scm (robin-hood-hashing): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:10 +02:00
Andre A. Gomes 94165cea08
gnu: sbcl-slynk: Update to 1.0.43-8-df62aba.
* gnu/packages/lisp-xyz.scm (sbcl-slynk): Update to 1.0.43-8-df62aba.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:10 +02:00
Andre A. Gomes f1faebdf9c
gnu: emacs-sly: Update to 1.0.43-8.df62aba.
* gnu/packages/emacs-xyz.scm (emacs-sly): Update to 1.0.43-8.df62aba.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:10 +02:00
Simon South 843978bc4f
gnu: ucsim: Update to 0.8.0.
* gnu/packages/embedded.scm (ucsim): Update to 0.8.0.
[source]: Update source URI.
[description]: Update.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:09 +02:00
Simon South 06b4aa57b7
gnu: ucsim: Move documentation to "doc" output.
* gnu/packages/embedded.scm (ucsim)[arguments]<#:phases>: Expand
"patch-makefiles" phase to set correct documentation-installation path.
[outputs]: Add with "out", "doc".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:09 +02:00
Simon South 9698a23f52
gnu: ucsim: Disable tests.
* gnu/packages/embedded.scm (ucsim)[arguments]: Add #:tests?.
[native-inputs]: Remove sdcc unconditionally.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:09 +02:00
Simon South e082079cb8
gnu: ucsim: Use gexps.
* gnu/packages/embedded.scm (ucsim)[arguments]: Use gexp.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:09 +02:00
Andy Tai be9b7e0f65
gnu: xpra: Update to 5.0.2
* gnu/packages/patches/xpra-4.2-install_libs.patch: Move to ...
* gnu/packages/patches/xpra-5.0-install_libs.patch: ... this file.
* gnu/packages/patches/xpra-4.2-systemd-run.patch: Move to ...
* gnu/packages/patches/xpra-5.0-systemd-run.patch: ... this file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/xorg.scm (xpra): Update to 5.0.2.
[source] <patches>:  Rename per version changes
[inputs]: Add cups.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:09 +02:00
Nicolas Graves fe7b5df00c
gnu: ublock-origin: Update to 1.51.0.
* gnu/packages/browser-extensions.scm
(ublock-main-assets): Add origin.
(ublock-prod-assets): Add origin.
(ublock-origin): Update to 1.51.0.
[source]: Dropped (recursive? #t).
[arguments]: Rewrite phase do-not-depend-on-git. Use gexp.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 11:44:08 +02:00
Ludovic Courtès 51e1df07b1
gnu: openssl@1.1: Upgrade replacement to 1.1.1u.
Includes fixes for CVE-2023-0215, CVE-2023-0286, CVE-2023-0464, CVE-2023-0465,
CVE-2023-0466, CVE-2023-2650, CVE-2022-4304, CVE-2022-4450.

* gnu/packages/tls.scm (openssl/fixed): Update to 1.1.1u.

Co-authored-by: Denis 'GNUtoo' Carikli <GNUtoo@cyberdimension.org>
2023-09-28 11:44:08 +02:00
Ludovic Courtès e67cb380f7
gnu: openssl@1.1: Really replace with fixed version.
The ‘replacement’ field of ‘openssl-1.1’ was apparently lost in a
previous merge commit ca. Jan. 2023; consequently, ‘openssl/fixed’ was
unused.

* gnu/packages/tls.scm (openssl-1.1)[replacement]: New field.
2023-09-28 11:44:08 +02:00
Ludovic Courtès 59587e2fda
gnu: guix: Update to d0438fc.
This adds the “builtin:git-download” derivation builder to guix-daemon,
added in commit 13b0cf85eb.

* gnu/packages/package-management.scm (guix): Update to d0438fc.
2023-09-28 11:44:08 +02:00
Mark H Weaver c480222665
gnu: icecat: Update to 115.3.0-guix0-preview1 [security fixes].
Includes fixes for CVE-2023-5168, CVE-2023-5169, CVE-2023-5171,
CVE-2023-5174, and CVE-2023-5176.

* gnu/packages/gnuzilla.scm (icu4c-73-promise): New variable.
(all-mozilla-locales, %icecat-base-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
(icecat-minimal)[inputs]: Use icu4c-73-promise.  Remove nss.
[native-inputs]: Use rust-cbindgen-0.24, llvm-15, clang-15, and node-lts.
[arguments]<configure-flags>: Comment out "--with-system-nss".
[description]: "IceCat 102" --> "IceCat 115".
(%icecat-locales): Update.
(all-mozilla-102-locales, %icecat-102-base-version)
(%icecat-102-version, icecat-102-source): New variables
bound to the old values, for use by icedove.
(icedove-source): Ues 'icecat-102-source'.
(make-l10n-package)[arguments]<phases>: Simplify reference to
'#$locales, and thereby eliminate the unnecessary dependence on
%icedove-locales by icecat-l10n, and similarly on %icecat-locales by
icedove-l10n.
[native-inputs]: Use node-lts.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt to new upstream.
* gnu/packages/patches/icecat-102-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2023-09-28 04:29:34 -04:00
Janneke Nieuwenhuizen f1823b5b6f
gnu: Register packages/java-rdf.scm.
This is a follow-up to commit
    0e11ca71be
    gnu: Add java-commons-rdf-api.

* gnu/local.mk (GNU_SYSTEM_MODULES): Add java-rdf.scm.
2023-09-28 08:51:14 +02:00
Nicolas Graves 3f7b091ea4
gnu: emacs-buttercup: Remove phase fix-spy-on-test.
* gnu/packages/emacs-xyz.scm: (emacs-buttercup)
[arguments](phases): Remove phase fix-spy-on-test, fixed in version 1.31.

Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-09-28 09:38:27 +04:00
Tobias Geerinckx-Rice 465af37f81
gnu: opensmtpd: Update to 7.3.0p2 [security fixes].
* gnu/packages/mail.scm (opensmtpd): Update to 7.3.0p2.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 3802745802
gnu: inxi-minimal: Update to 3.3.30-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.30-1.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice be2344fbea
gnu: 7kaa: Update to 2.15.6.
* gnu/packages/games.scm (7kaa): Update to 2.15.6.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice b1890b2743
gnu: rizin: Edit synopsis.
* gnu/packages/engineering.scm (rizin)[synopsis]: Expand abbrev.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 8781f377e0
gnu: rizin: Update to 0.6.2.
* gnu/packages/engineering.scm (rizin): Update to 0.6.2.
[inputs]: Re-indent.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice e82cd9176e
gnu: minicom: Update package style.
* gnu/packages/engineering.scm (minicom)[arguments]:
Rewrite as G-expressions.
[native-inputs]: Remove input labels.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice fd2f78f5fc
gnu: minicom: Update to 2.9.
* gnu/packages/engineering.scm (minicom): Update to 2.9.
[arguments]: Don't explicitly return #t from phases.
[native-inputs]: Upgrade autoconf to autoconf-2.71.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 4e64374743
gnu: libdeflate: Update to 1.19.
* gnu/packages/compression.scm (libdeflate): Update to 1.19.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice ee6b92a99b
gnu: astyle: Don't build static or debug libraries.
* gnu/packages/code.scm (astyle)[arguments]: Build only the "release"
and "shared" targets we actually care about.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice cf6bbf185d
gnu: astyle: Use G-expressions.
* gnu/packages/code.scm (astyle)[arguments]:
Rewrite as G-expressions.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 4658173ea4
gnu: astyle: Omit static libraries.
* gnu/packages/code.scm (astyle)[arguments]: Improve the buggy regexp
in the 'install-libs phase to install only dynamic libraries.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice b2b7411466
gnu: astyle: Update to 3.4.8.
* gnu/packages/code.scm (astyle): Update to 3.4.8.
[arguments]: Don't explicitly return #t from phases.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 2bae0081f9
gnu: nmrpflash: Use G-expressions.
* gnu/packages/admin.scm (nmrpflash)[arguments]:
Rewrite as G-expressions.
2023-09-24 02:00:00 +02:00
Tobias Geerinckx-Rice 674355c399
gnu: nmrpflash: Update to 0.9.21.
* gnu/packages/admin.scm (nmrpflash): Update to 0.9.21.
2023-09-24 02:00:00 +02:00
Jean-Pierre De Jesus DIAZ d0438fcf65
gnu: Add liquidctl.
* gnu/packages/hardware.scm (liquidctl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 00:06:26 +02:00
Jean-Pierre De Jesus DIAZ 18bf6c69be
gnu: python-pyusb: Add libusb-compat backend.
* gnu/packages/libusb.scm (python-pyusb) <arguments>: Do not hard-code
  libusb1 library for all back-ends, and allow to use libusb0 as a
  back-end.  Also enabled tests as the package does have a test suite.

* gnu/packages/libusb.scm (python-pyusb) <inputs>: Add libusb-compat.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 00:06:09 +02:00
Jean-Pierre De Jesus DIAZ c307a18415
gnu: python-pyusb: Use G-Expressions.
* gnu/packages/usb.scm (python-pyusb) <arguments>: Use G-Expressions
  style instead of quoting.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-09-28 00:06:00 +02:00