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55321 Commits (b3987cd3d2df84cec982b2793de55f058c25c748)

Author SHA1 Message Date
Timotej Lazar df3a461184
gnu: znc: Use HTTPS.
* gnu/packages/messaging.scm (znc)[source]: Use HTTPS.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-17 14:49:23 +03:00
Efraim Flashner 7b3cb5acb8
gnu: efl: Update to 1.24.3.
* gnu/packages/enlightenment.scm (efl): Update to 1.24.3.
[arguments]: Remove opengl flags from configure-flags.
2020-06-17 14:46:43 +03:00
Efraim Flashner ee3eba3b8b
gnu: kodi: Update to 18.7.1.
* gnu/packages/kodi.scm (kodi): Update to 18.7.1.
2020-06-17 14:46:43 +03:00
Tobias Geerinckx-Rice 18debc6e4f
gnu: mgba: Update to 0.8.2.
* gnu/packages/emulators.scm (mgba): Update to 0.8.2.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice ec40d24fb9
gnu: rocksdb: Update to 6.10.2.
* gnu/packages/databases.scm (rocksdb): Update to 6.10.2.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice 6d164aecc8
gnu: sbsigntools: Update to 0.9.4.
* gnu/packages/efi.scm (sbsigntools): Update to 0.9.4.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice 0f27f41d59
gnu: hplip: Update to 3.20.6.
* gnu/packages/cups.scm (hplip): Update to 3.20.6.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice a7d74db93d
gnu: corsix-th: Update to 0.64.
* gnu/packages/games.scm (corsix-th): Update to 0.64.
2020-06-17 13:34:27 +02:00
Mathieu Othacehe 92d8c4aa38
Revert "gnu: guix: Update to 1.1.0-11.559491e."
This reverts commit ed8583d162 because of some
test failures.
2020-06-17 12:25:46 +02:00
nikita a3a8b88620
gnu: gnurl: Update to 7.70.0.
* gnu/packages/gnunet.scm (gnurl): Update to 7.70.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-17 12:06:33 +02:00
Ludovic Courtès c941b3128b
gnu: Add guvcview.
* gnu/packages/video.scm (guvcview): New variable.
2020-06-17 12:06:33 +02:00
Nicolas Goaziou ce84582b51
gnu: Add frozen-bubble.
* gnu/packages/games.scm (frozen-bubble): New variable.
2020-06-17 11:56:34 +02:00
Nicolas Goaziou eae6dd6f11
gnu: Add perl-sdl.
* gnu/packages/perl.scm (perl-sdl): New variable.
2020-06-17 11:56:34 +02:00
Nicolas Goaziou 16b1237938
gnu: Add perl-alien-sdl.
* gnu/packages/perl.scm (perl-alien-sdl): New variable.
2020-06-17 11:56:33 +02:00
Mathieu Othacehe ed8583d162
gnu: guix: Update to 1.1.0-11.559491e.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-11.559491e.
2020-06-17 11:17:57 +02:00
Leo Famulari 559491ea5b
gnu: Transmission: Clean up the package definition.
* gnu/packages/bittorrent.scm (transmission)[license]: Correct the license
field.
[inputs]: Remove unused inputs inotify-tools, cyrus-sasl, and file.
2020-06-17 01:29:01 -04:00
Giacomo Leidi e7a7a483bc
gnu: papirus-icon-theme: Update to 20200602.
* gnu/packages/gnome-xyz.scm (papirus-icon-theme): Update to 20200602.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-16 23:09:47 +02:00
Giacomo Leidi 2eadf0917c
gnu: gnome-shell-extension-dash-to-panel: Update to 37.
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-dash-to-panel): Update to 37.
2020-06-16 23:07:44 +02:00
Jonathan Brielmaier d26186232e
gnu: Add chatty.
* gnu/packages/messaging.scm (chatty): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:53:47 +03:00
Jonathan Brielmaier 593ef98a28
gnu: Add purple-mm-sms.
* gnu/packages/messaging.scm (purple-mm-sms): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:36:37 +03:00
Jonathan Brielmaier 0faed3995b
gnu: Add feedbackd.
* gnu/packages/gnome.scm (feedbackd): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:30:03 +03:00
Tanguy Le Carrour f1adcfd37a
gnu: poetry: Update to 1.0.9.
* gnu/packages/python-xyz.scm (poetry): Update to 1.0.9.
[arguments] Adjust required versions of pyrsistent. Remove required
version of importlib-metadata.
[propagated-inputs] Add python-msgpack-transitional.
Remove python-importlib-metadata.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:21:40 +03:00
Tanguy Le Carrour 8d5c55b2e8
gnu: python-memcached: Add patch to fix syntax warnings.
* gnu/packages/patches/python-memcached-syntax-warnings.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-memcached)[source]: Add it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:18:26 +03:00
Efraim Flashner daca70770a
gnu: guile-chickadee: Supress guile warnings.
* gnu/packages/game-development.scm (guile-chickadee)[arguments]: Add
make-flag to not autocompile guile files.
2020-06-16 23:05:43 +03:00
Efraim Flashner fb42a763e8
gnu: guile-sdl2: Remove unused configure-flags.
* gnu/packages/sdl.scm (guile-sdl2)[arguments]: Remove configure-flags.
2020-06-16 23:02:48 +03:00
Danny O'Brien 70fb07b520
gnu: guile-chickadee: Update to 0.5.0.
* gnu/packages/game-development.scm (guile-chickadee): Update to 0.5.0.
[inputs]: Add libvorbis, mpg123, openal.
(guile3.0-chickadee)[inputs]: Same.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 22:58:36 +03:00
Danny O'Brien 75990dcc57
gnu: guile-sdl2: Update to 0.5.0.
* gnu/packages/sdl.scm (guile-sdl2): Update to 0.5.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 22:58:27 +03:00
Michael Rohleder b3e52889c5
gnu: emacs-deadgrep: Update to 0.10.
* gnu/packages/emacs-xyz.scm (emacs-deadgrep): Update to 0.10.
[inputs]: change into...
[propagated-inputs]: ... this.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-16 21:35:29 +02:00
Nicolas Goaziou 503737624c
gnu: emacs-emms: Update to 5.42.
* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 5.42.
[source]: Use GNU ELPA repository.
[arguments]: Remove unnecessary phases.
2020-06-16 21:17:40 +02:00
Christopher Lemmer Webber 7fc273fe3f
gnu: crawl: Update to 0.25.0.
* gnu/packages/games.scm (crawl): Update to 0.25.0.
2020-06-16 15:04:49 -04:00
Ricardo Wurmus 7146c8c75d
gnu: python-ipython: Use python-prompt-toolkit-2.
This prevents conflicting variants of python-prompt-toolkit from being
installed, which prevented jupyter from being installed.

* gnu/packages/python-xyz.scm (python-ipython)[propagated-inputs]: Replace
python-prompt-toolkit with python-prompt-toolkit-2.
(python-widgetsnbextension)[propagated-inputs]: Do not use
prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel.
(python-ipywidgets)[propagated-inputs]: Do not use
prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython.
(python-jupyter-console)[propagated-inputs]: Do not use
prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel.
(prompt-toolkit-2-instead-of-prompt-toolkit): Remove variable.
* gnu/packages/machine-learning.scm (python-iml)[propagated-inputs]: Do not
use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython.
2020-06-16 19:33:11 +02:00
Mathieu Othacehe 4febc38d9f
installer: final: Remove restart-service procedure.
* gnu/installer/final.scm (umount-cow-store): Remove "restart-service" that is
now provided by (gnu services herd).
2020-06-16 16:33:55 +02:00
Mathieu Othacehe e23ec7144c
gnu: libmateweather: Fix tests.
Apply the following upstream fix:
ea13e06563.

* gnu/packages/mate.scm (libmateweather)[source]: Fix tests by renaming
America/Godthab timezone to America/Nuuk.
2020-06-16 16:33:55 +02:00
Tobias Geerinckx-Rice b6329d026b
gnu: nix: Look for configuration in /etc.
Fixes <http://issues.guix.gnu.org/41704>.

* gnu/packages/package-management.scm (nix)[arguments]: Add
‘--sysconfdir=/etc’ configure flag and override it during installation.

Requested-and-tested-by: Peng Mei Yu <pengmeiyu@riseup.net>
2020-06-16 13:35:56 +02:00
Ricardo Wurmus 5f7b17a6e1
gnu: emacs-god-mode: Update to 2.17.0.
* gnu/packages/emacs-xyz.scm (emacs-god-mode): Update to 2.17.0.
2020-06-16 12:50:44 +02:00
Pierre Neidhardt 52adfeaed4
gnu: bsnes: Remove unnecessary inputs.
* gnu/packages/emulators.scm (bsnes)[inputs]: Remove gt+-2 and libx11.
2020-06-16 12:15:10 +02:00
Efraim Flashner 88ff06415c
gnu: Add rust-nom-5.
* gnu/packages/crates-io.scm (rust-nom-5): New variable.
(rust-nom-4.2): Inherit from rust-nom-5.
2020-06-16 12:49:05 +03:00
Efraim Flashner 16dcf12736
gnu: Add rust-lexical-core-0.7.
* gnu/packages/crates-io.scm (rust-lexical-core-0.7): New variable.
(rust-lexical-core-0.4): Inherit from rust-lexical-core-0.7.
2020-06-16 12:49:05 +03:00
Efraim Flashner 6675cd8c24
gnu: Add rust-static-assertions-1.
* gnu/packages/crates-io.scm (rust-static-assertions-1): New variable.
(rust-static-assertions-0.3): Inherit from rust-static-assertions-1.
2020-06-16 12:49:05 +03:00
Pierre Neidhardt 391aff1f68
gnu: Add bsnes.
* gnu/packages/emulators.scm (bsnes): New variable.
2020-06-16 10:56:35 +02:00
Ricardo Wurmus 000c7a0f70
gnu: r-xgboost: Update to 1.1.1.1.
* gnu/packages/cran.scm (r-xgboost): Update to 1.1.1.1.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus 6afe39829d
gnu: r-genenet: Update to 1.2.15.
* gnu/packages/cran.scm (r-genenet): Update to 1.2.15.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus e766bd1f13
gnu: r-performance: Update to 0.4.7.
* gnu/packages/cran.scm (r-performance): Update to 0.4.7.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus ead67125a8
gnu: r-abn: Update to 2.2.1.
* gnu/packages/cran.scm (r-abn): Update to 2.2.1.
[propagated-inputs]: Add r-boot, r-brglm, r-entropy, and r-moments.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus 389a357a72
gnu: r-vioplot: Update to 0.3.5.
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.5.
[native-inputs]: Add r-knitr.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus e89bc53e76
gnu: r-circlize: Update to 0.4.10.
* gnu/packages/cran.scm (r-circlize): Update to 0.4.10.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus b1a7a3bb78
gnu: Add r-entropy.
* gnu/packages/cran.scm (r-entropy): New variable.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus aee8cc0a0d
gnu: Add r-brglm.
* gnu/packages/cran.scm (r-brglm): New variable.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus 6a933e9a8b
gnu: Add r-profilemodel.
* gnu/packages/cran.scm (r-profilemodel): New variable.
2020-06-16 09:33:53 +02:00
Maxim Cournoyer fb8542ed5c
gnu: emacs-yasnippet: Clean-up package definition.
An old snippet was causing the build to fail when using Emacs 27.

* gnu/packages/emacs-xyz.scm (emacs-yasnippet)[source]: Use git-file-name, and
remove obsolete snippet.
[phases]{home}: New phase.  This allows the rebindings test to pass.
{make-tests-writable, delete-rebinding-test}: Remove phases.
[description]: Re-indent.
2020-06-16 00:18:09 -04:00
Tobias Geerinckx-Rice 4df47410cf
gnu: volk: Improve description mark-up.
* gnu/packages/engineering.scm (volk)[description]: Substitute
@acronym for the less appropriate @code.
2020-06-16 05:15:47 +02:00
Tobias Geerinckx-Rice 5ed89cac64
gnu: volk: Fix typo in description.
* gnu/packages/engineering.scm (volk)[description]: Fix typo.
2020-06-16 05:15:47 +02:00
Tobias Geerinckx-Rice 40f986db30
gnu: inxi-minimal: Update to 3.1.03-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.1.03-1.
2020-06-16 05:15:47 +02:00
Tobias Geerinckx-Rice 0f99da2b39
gnu: tup: Update to 0.7.9.
* gnu/packages/build-tools.scm (tup): Update to 0.7.9.
2020-06-16 05:15:47 +02:00
Arun Isaac ec8e1c9177
gnu: glade3: Enable tests.
* gnu/packages/gnome.scm (glade3)[arguments]: Enable tests. Add custom
pre-check phase.
[native-inputs]: Add hicolor-icon-theme and xorg-server-for-tests.
2020-06-15 23:38:53 +05:30
Mathieu Othacehe cf48f0fc4c
gnu: cuirass: Update to 0.0.1-32.3db603c.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-32.3db603c.
2020-06-15 16:29:22 +02:00
Tobias Geerinckx-Rice a3370b30f7
gnu: volk: Make retained references non-native inputs.
* gnu/packages/engineering.scm (volk)[native-inputs]:
Move python-wrapper and python-mako…
[inputs]: …here.
2020-06-15 14:26:44 +02:00
Tobias Geerinckx-Rice 6e1aa1c443
gnu: volk: Update to 2.3.0.
* gnu/packages/engineering.scm (volk): Update to 2.3.0.
2020-06-15 14:26:44 +02:00
Ricardo Wurmus 8b00728144
gnu: r-limma: Update to 3.44.3.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.44.3.
2020-06-15 12:00:21 +02:00
Pierre Neidhardt d6797a566f
gnu: openmw: Update to 0.46.0.
* gnu/packages/game-development.scm (openmw): Update to 0.46.0.
2020-06-15 11:14:55 +02:00
Efraim Flashner 5a3614cfe3
gnu: quassel: Add context menu for d-bus tray icon.
* gnu/packages/irc.scm (quassel)[inputs]: Add libdbusmenu-qt.
2020-06-15 11:47:54 +03:00
Efraim Flashner 3a2bb37941
gnu: quassel: Fix build with qt-5.14.
* gnu/packages/irc.scm (quassel)[source]: Add patch.
* gnu/packages/patches/quassel-qt-514-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2020-06-15 11:25:30 +03:00
Nicolas Goaziou b64ca5dadc
gnu: emacs-debbugs: Update to 0.24.
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.24.
2020-06-15 09:13:21 +02:00
Andrew Whatson 98366c991f
gnu: Add emacs-flycheck-guile.
* gnu/packages/emacs-xyz.scm (emacs-flycheck-guile): New variable.
2020-06-15 08:59:56 +02:00
Maxim Cournoyer 1afa2c5ca0
gnu: inkscape: Add the glib-or-gtk-build-system phases.
This fixes an issue where an improperly set XDG_DATA_DIRS environment variable
would cause a segfault when opening the 'Save As' menu of Inkscape.  See:
<https://lists.gnu.org/archive/html/help-guix/2020-06/msg00093.html>.

* gnu/packages/inkscape.scm (inkscape-1.0)[arguments]: Import the
(guix build glib-or-gtk-build-system) module.
[phases]: Add the glib-or-gtk-compile-schemas and glib-or-gtk-wrap phases.

Reported-by: Thorsten Wilms <t_w_@freenet.de>
2020-06-14 23:16:33 -04:00
Maxim Cournoyer 3d7726b7f2
gnu: emacs-org-reveal: Update to 20200607.
* gnu/packages/emacs-xyz.scm (emacs-org-reveal): Update to 20200607.
2020-06-14 22:19:31 -04:00
Jakub Kądziołka 2c1d1b7599
gnu: Add tup.
* gnu/packages/build-tools.scm (tup): New variable.
* gnu/packages/patches/tup-unbundle-dependencies.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register new file.
2020-06-14 23:52:21 +02:00
Marius Bakke 065cb27abb
gnu: Add iputils.
* gnu/packages/patches/iputils-libcap-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/networking.scm (iputils): New public variable.
2020-06-14 23:15:22 +02:00
Marius Bakke bf7321cc91
gnu: docbook: Add 5.0.1.
* gnu/packages/docbook.scm (docbook-xml-5): New public variable.
(docbook-xml): Inherit from it.  While at it, remove trailing whitespace.
2020-06-14 23:15:22 +02:00
Marius Bakke 54bbed9638
gnu: Add ndisc6.
* gnu/packages/networking.scm (ndisc6): New public variable.
2020-06-14 23:15:22 +02:00
Marius Bakke cf123e321d
gnu: Add ghc-psqueue.
* gnu/packages/haskell-xyz.scm (ghc-psqueue): New public variable.
2020-06-14 23:15:22 +02:00
Marius Bakke dcfd1d2caf
gnu: Add shelltestrunner.
* gnu/packages/haskell-apps.scm (shelltestrunner): New public variable.
2020-06-14 23:15:21 +02:00
Marius Bakke ddd7983648
gnu: Add ghc-regex-pcre.
* gnu/packages/haskell-xyz.scm (ghc-regex-pcre): New public variable.
2020-06-14 23:15:21 +02:00
Marius Bakke b1342a8257
gnu: Add ghc-curl.
* gnu/packages/haskell-web.scm (ghc-curl): New public variable.
2020-06-14 23:15:21 +02:00
Martin Becze 9a3ddeea98
gnu: Add go-github-com-mattn-go-pointer.
* gnu/packages/golang.scm (go-github-com-mattn-go-pointer): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-15 00:08:56 +03:00
Martin Becze 4b52722838
gnu: Add go-golang-org-x-oauth2.
* gnu/packages/golang.scm (go-golang-org-x-oauth2): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-15 00:08:56 +03:00
Ludovic Courtès 535581a72a
gnu: emacs-erc-status-sidebar: Placate 'guix lint'.
* gnu/packages/emacs-xyz.scm (emacs-erc-status-sidebar)[source]: Add
'file-name'.
[synopsis, description]: Adjust.
2020-06-14 23:02:36 +02:00
Michael Rohleder 267be609f7
gnu: Add emacs-erc-status-sidebar.
* gnu/packages/emacs-xyz.scm (emacs-erc-status-sidebar): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-14 23:02:36 +02:00
Pierre Neidhardt 1b917f99b5
gnu: Add augustus.
* gnu/packages/games.scm (augustus): New variable.
2020-06-14 22:44:15 +02:00
Vagrant Cascadian 526a0066ac
gnu: diffoscope: Update to 147.
* gnu/packages/diffoscope (diffoscope): Update to 147.
2020-06-14 12:58:12 -07:00
Jan (janneke) Nieuwenhuizen 5e9cf93364
services: Add 'hurd-vm service-type'.
* gnu/services/virtualization.scm (hurd-vm-shepherd-service,
hurd-vm-disk-image): New procedures.
(%hurd-vm-operating-system, hurd-vm-service-type): New variables.
(<hurd-vm-configuration>): New record type.
* doc/guix.texi (Virtualization Services): Document it.
* gnu/services/shepherd.scm (scm->go): Use let-system, remove FIXME.  Fixes
fixes cross-building of shepherd modules for the Hurd image.
2020-06-14 18:38:44 +02:00
Mathieu Othacehe c9f6e2e5bd
system: image: Make sure target is set.
* gnu/system/image.scm (system-image): Move "with-parameters" call so that it
encapsulates "operating-system-bootcfg".
2020-06-14 18:03:08 +02:00
Mathieu Othacehe 39b63d06e1
system: image: Remove left-over.
* gnu/system/image.scm: Remove a left-over since maybe-with-target procedure
was removed.
2020-06-14 17:57:30 +02:00
Mathieu Othacehe 876a8d9870
installer: final: Make sure 'bold' font files are loaded.
* gnu/installer/newt/final.scm (run-install-shell): Force kmscon to open
'bold' font files, before the cow-store overlay is mounted.
2020-06-14 17:42:36 +02:00
Efraim Flashner e88745a655
gnu: qtox: Don't use unstable tarball.
* gnu/packages/messaging.scm (tox)[source]: Don't use autogenerated
tarball.
2020-06-14 17:13:32 +03:00
Reza Alizadeh Majd bd89d898c1
gnu: qtox: Update to 1.17.2.
* gnu/packages/messaging.scm (qtox): Update to 1.17.2.
[arguments]: Add phase to disable network tests.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-14 17:13:32 +03:00
Reza Alizadeh Majd 1a2e3d940f
gnu: c-toxcore: Update to 0.2.12.
*  gnu/packages/messaging.scm (c-toxcore): Update to 0.2.12.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-14 17:13:29 +03:00
Alex Griffin 3010035b40
gnu: pagekite: Update to 1.5.2.200603.
* gnu/packages/networking.scm (pagekite): Update to 1.5.2.200603.
2020-06-14 09:02:35 -05:00
Alex Griffin 2199b1db5c
gnu: python-socksipychain: Update to 2.1.2.
* gnu/packages/python-xyz.scm (python-socksipychain): Update to 2.1.2.
2020-06-14 09:02:31 -05:00
Brice Waegeneire 4f6e6c0442
gnu: zsh: Set default '$fpath'.
* gnu/packages/shells.scm (zsh)[arguments]: Add configure-flags
'disable-site-dir' and 'enable-additional-fpath'.
2020-06-14 15:25:56 +02:00
Efraim Flashner 0526185ebb
gnu: kdeconnect: Update to 20.04.1.
* gnu/packages/kde.scm (kdeconnect): Update to 20.04.1.
[source]: Update source URI.
[arguments]: Adjust configure flags.
2020-06-14 15:59:52 +03:00
Pierre Neidhardt cc62eab163
gnu: Add bbswitch-module.
* gnu/packages/linux.scm (bbswitch-module): New variable.
2020-06-14 13:26:05 +02:00
Danny Milosavljevic 4fdf3a2e6e
gnu: busybox: Update to 1.31.1.
* gnu/packages/patches/busybox-1.31.1-fix-build-with-glibc-2.31.patch: New file
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/busybox.scm (busybox): Update to 1.31.1.
[source]: Use patch.
[arguments]<#:phases>[check]: Fix test.
2020-06-14 13:03:05 +02:00
Danny Milosavljevic c37dc30e61
gnu: busybox: Make build reproducible.
* gnu/packages/busybox.scm (busybox)[arguments]<#:phases>[disable-timestamps]:
New phase.
2020-06-14 13:01:27 +02:00
Nicolas Goaziou f810d69b6c
gnu: Use ‘license:’ prefix in (gnu packages perl).
* gnu/packages/perl.scm: Import (guix licenses) with a #:prefix
and adjust all callers.
2020-06-14 12:19:46 +02:00
Nicolas Goaziou e8356966b7
gnu: Add perl-text-patch.
* gnu/packages/perl.scm (perl-text-patch): New variable.
2020-06-14 12:19:45 +02:00
Nicolas Goaziou 10ed3525a4
gnu: Add perl-locale-maketext-lexicon.
* gnu/packages/perl.scm (perl-locale-maketext-lexicon): New variable.
2020-06-14 12:19:45 +02:00
Nicolas Goaziou 3329569bb4
gnu: Add perl-ppi.
* gnu/packages/perl.scm (perl-ppi): New variable.
2020-06-14 12:19:45 +02:00
Nicolas Goaziou 87554eee8b
gnu: Add perl-compress-bzip2.
* gnu/packages/perl-compression.scm (perl-compress-bzip2): New variable.
2020-06-14 12:19:44 +02:00
Nicolas Goaziou cbddff6d70
gnu: Add perl-lingua-en-sentence.
* gnu/packages/perl.scm (perl-lingua-en-sentence): New variable.
2020-06-14 12:19:44 +02:00
Nicolas Goaziou 5e44ec69d6
gnu: Add perl-text-haml.
* gnu/packages/perl.scm (perl-text-haml): New variable.
2020-06-14 12:19:43 +02:00
Nicolas Goaziou c158ab3067
gnu: Add perl-tie-simple.
* gnu/packages/perl.scm (perl-tie-simple): New variable.
2020-06-14 12:19:43 +02:00
Nicolas Goaziou f463868898
gnu: Add perl-data-section-simple.
* gnu/packages/perl.scm (perl-data-section-simple): New variable.
2020-06-14 12:19:43 +02:00
Nicolas Goaziou 6897699611
gnu: Add perl-test-subcalls.
* gnu/packages/perl-check.scm (perl-test-subcalls): New variable.
2020-06-14 12:19:42 +02:00
Nicolas Goaziou e72b40af3e
gnu: Add perl-test-object.
* gnu/packages/perl-check.scm (perl-test-object): New variable.
2020-06-14 12:19:42 +02:00
Nicolas Goaziou 25985c6957
gnu: Add perl-hook-lexwrap.
* gnu/packages/perl.scm (perl-hook-lexwrap): New variable.
2020-06-14 12:19:42 +02:00
Ivan Kozlov 8331e2357b
gnu: xl2tpd: Add pppd support.
* gnu/packages/vpn.scm (xl2tpd)[inputs]: Add "linux-libre-headers" and "ppp",
[arguments]: add a 'setup-environment phase to set "PPPD" and "KERNELSRC"
variables.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-06-14 11:53:45 +02:00
Ricardo Wurmus d291b454bd
gnu: r-survival: Update to 3.2-3.
* gnu/packages/statistics.scm (r-survival): Update to 3.2-3.
2020-06-14 09:13:32 +02:00
Ricardo Wurmus cb935a0377
gnu: r-sf: Update to 0.9-4.
* gnu/packages/cran.scm (r-sf): Update to 0.9-4.
2020-06-14 09:13:32 +02:00
Ricardo Wurmus b8ea08feb8
gnu: r-units: Update to 0.6-7.
* gnu/packages/cran.scm (r-units): Update to 0.6-7.
2020-06-14 09:13:32 +02:00
Ricardo Wurmus dfe1a36465
gnu: r-calibrate: Update to 1.7.6.
* gnu/packages/cran.scm (r-calibrate): Update to 1.7.6.
2020-06-14 09:13:32 +02:00
Ricardo Wurmus 214ee82742
gnu: r-flowworkspace: Update to 4.0.6.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.0.6.
2020-06-14 09:13:22 +02:00
Kei Kebreau 13d962b9a6
gnu: starfighter: Update to 2.2.
* gnu/packages/games.scm (starfighter): Update to 2.2.
2020-06-13 18:54:58 -04:00
Tobias Geerinckx-Rice ae89d96c08
gnu: wesnoth: Update to 1.14.12.
* gnu/packages/games.scm (wesnoth): Update to 1.14.12.
2020-06-14 00:05:12 +02:00
Tobias Geerinckx-Rice b9587aa3c7
gnu: snd: Update to 20.4.
* gnu/packages/audio.scm (snd): Update to 20.4.
2020-06-14 00:05:12 +02:00
Tobias Geerinckx-Rice b97b8b44ca
gnu: progress: Fix cross-compilation.
* gnu/packages/admin.scm (progress)[arguments]: Use CC-FOR-TARGET and a
target-specific pkg-config when cross-compiling.
2020-06-14 00:05:12 +02:00
Tobias Geerinckx-Rice 4187e5401f
gnu: s6-portable-utils: Update to 2.2.2.4.
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.2.4.
2020-06-14 00:05:11 +02:00
Tobias Geerinckx-Rice 69300c0d70
gnu: gnome-boxes: Update to 3.36.5.
* gnu/packages/gnome.scm (gnome-boxes): Update to 3.36.5.
2020-06-14 00:05:11 +02:00
Tobias Geerinckx-Rice de08b5b23f
gnu: evince: Update to 3.36.5.
* gnu/packages/gnome.scm (evince): Update to 3.36.5.
2020-06-14 00:05:11 +02:00
Tobias Geerinckx-Rice a5d40ee7ac
gnu: python-shellingham: Update to 1.3.2.
* gnu/packages/python-xyz.scm (python-shellingham): Update to 1.3.2.
[arguments]: Add ‘restore-setup.py’ phase.
2020-06-14 00:05:11 +02:00
Tobias Geerinckx-Rice 238e2e457f
gnu: xapian: Update to 1.4.16.
* gnu/packages/search.scm (xapian): Update to 1.4.16.
(python-xapian-bindings)[source]: Update content hash.
2020-06-14 00:05:10 +02:00
Tobias Geerinckx-Rice 36384fd2f8
gnu: rclone: Update to 1.52.1.
* gnu/packages/sync.scm (rclone): Update to 1.52.1.
2020-06-14 00:05:10 +02:00
Tobias Geerinckx-Rice c668a8809a
gnu: cogl: Update to 1.22.8.
* gnu/packages/gnome.scm (cogl): Update to 1.22.8.
2020-06-14 00:05:10 +02:00
Tobias Geerinckx-Rice 483ce0d3c7
gnu: gimp: Update to 2.10.20.
* gnu/packages/gimp.scm (gimp): Update to 2.10.20.
2020-06-14 00:05:10 +02:00
Tobias Geerinckx-Rice e76d190788
gnu: gegl: Update to 0.4.24.
* gnu/packages/gimp.scm (gegl): Update to 0.4.24.
2020-06-14 00:05:10 +02:00
Tobias Geerinckx-Rice ee385c5837
gnu: babl: Update to 0.1.78.
* gnu/packages/gimp.scm (babl): Update to 0.1.78.
2020-06-14 00:05:09 +02:00
Tobias Geerinckx-Rice e51101ecda
gnu: libtextstyle: Update to 0.20.2.
* gnu/packages/gettext.scm (libtextstyle): Update to 0.20.2.
2020-06-14 00:05:09 +02:00
Tobias Geerinckx-Rice b4bfd66b9a
gnu: ltris: Update to 1.0.20.
* gnu/packages/games.scm (ltris): Update to 1.0.20.
2020-06-14 00:05:09 +02:00
Tobias Geerinckx-Rice d7822dc677
gnu: julius: Update to 1.4.1.
* gnu/packages/games.scm (julius): Update to 1.4.1.
2020-06-14 00:05:09 +02:00
Tobias Geerinckx-Rice d321d35aa9
gnu: angband: Use HTTPS.
* gnu/packages/games.scm (angband)[source, home-page]: Use HTTPS.
2020-06-14 00:05:09 +02:00
Tobias Geerinckx-Rice 4c9577443f
gnu: angband: Update to 4.2.1.
* gnu/packages/games.scm (angband): Update to 4.2.1.
2020-06-14 00:05:08 +02:00
Tobias Geerinckx-Rice fbbaf04d88
gnu: libolm: Update to 3.1.5.
* gnu/packages/crypto.scm (libolm): Update to 3.1.5.
2020-06-14 00:05:08 +02:00
Tobias Geerinckx-Rice 8c07da61e7
gnu: gnome-chess: Update to 3.36.1.
* gnu/packages/games.scm (gnome-chess): Update to 3.36.1.
2020-06-14 00:05:08 +02:00
Tobias Geerinckx-Rice 0c716128d3
gnu: gnome-chess: Don't use NAME in source URI.
* gnu/packages/games.scm (gnome-chess)[source]: Hard-code NAME.
2020-06-14 00:05:08 +02:00
Tobias Geerinckx-Rice ac6f1c777a
gnu: facter: Update to 4.0.26.
* gnu/packages/admin.scm (facter): Update to 4.0.26.
2020-06-14 00:05:08 +02:00
Tobias Geerinckx-Rice d22dc5f728
gnu: rust-tokio: Update to 0.2.21.
* gnu/packages/crates-io.scm (rust-tokio): Update to 0.2.21.
2020-06-14 00:05:07 +02:00
Tobias Geerinckx-Rice 33678aee91
gnu: rust-serde-bytes: Fix typo in synopsis.
* gnu/packages/crates-io.scm (rust-serde-bytes)[synopsis]: Remove ‘of’.
2020-06-14 00:05:07 +02:00
Tobias Geerinckx-Rice 449bac5b4d
gnu: rust-serde-bytes: Update to 0.11.5.
* gnu/packages/crates-io.scm (rust-serde-bytes): Update to 0.11.5.
2020-06-14 00:05:07 +02:00
Ricardo Wurmus ea7882b2e3
gnu: alsa-modular-synth: Hide default GCC.
* gnu/packages/audio.scm (alsa-modular-synth)[native-inputs]: Distinguish
GCC-5.
[arguments]: Add build phase "hide-default-gcc".
2020-06-13 23:50:02 +02:00
Ricardo Wurmus 401e6ccb12
gnu: alsa-modular-synth: Add patch to fix vocoder build error.
* gnu/packages/patches/alsa-modular-synth-fix-vocoder.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/audio.scm (alsa-modular-synth)[source]: Add it.
2020-06-13 23:50:01 +02:00
Marius Bakke 29961439aa
gnu: check@0.12: Do not inherit replacements from check.
* gnu/packages/check.scm (check-0.12): Use INHERIT instead of PACKAGE/INHERIT.
2020-06-13 23:29:22 +02:00
Marius Bakke cce6b76416
gnu: libnet: Update home page.
* gnu/packages/networking.scm (libnet)[home-page]: Adjust to current, as
referred to from the previous.
2020-06-13 23:29:22 +02:00
Marius Bakke 41cb238281
gnu: libnet: Update to 1.2.
* gnu/packages/networking.scm (libnet): Update to 1.2.
[source]: Switch to URL-FETCH.
[arguments]: Remove chdir phase.
[native-inputs]: Remove AUTOCONF, AUTOMAKE, and LIBTOOL.  Add PERL.
2020-06-13 23:29:21 +02:00
Marius Bakke dd61cd85f1
gnu: jucipp: Build with Clang 10.
* gnu/packages/text-editors.scm (jucipp)[inputs]: Change from CLANG to CLANG-10.
2020-06-13 23:29:21 +02:00
Marius Bakke 4723766b93
gnu: ghc-regex-pcre-builtin: Update home page.
* gnu/packages/haskell-xyz.scm (ghc-regex-pcre-builtin)[home-page]: Set to the
correct home page, not the alternative 'ghc-regex-pcre' library.
2020-06-13 23:29:21 +02:00
Marius Bakke 1a6d0d8c2d
gnu: perl-net-dns-resolver-programmable: Remove "v" prefix from version string.
* gnu/packages/networking.scm (perl-net-dns-resolver-programmable)[version]:
Remove "v" prefix.
[source](uri): Adjust accordingly.
2020-06-13 23:29:21 +02:00
Marius Bakke 8ab70bae52
Merge branch 'staging' 2020-06-13 22:52:25 +02:00
Ricardo Wurmus 9bc516bada
gnu: Add r-pcatools.
* gnu/packages/bioconductor.scm (r-pcatools): New variable.
2020-06-13 22:35:29 +02:00
Ricardo Wurmus e8521f0b95
gnu: libnode: Delete unused phase.
This is a follow-up to commit bb310a1976.

* gnu/packages/node.scm (libnode)[arguments]: Delete phase
"patch-npm-shebang".
2020-06-13 20:04:51 +02:00
Ekaitz Zarraga 2c74e87079
gnu: Add meshlab.
* gnu/packages/engineering.scm (meshlab): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-13 19:16:14 +02:00
Ludovic Courtès ff30860b63
gnu: perf: Set 'CC'.
* gnu/packages/linux.scm (perf)[arguments]: Add "CC=gcc" to #:make-flags.
This fixes a (harmless?) error message during the 'configure' phase.
2020-06-13 19:16:14 +02:00
Ludovic Courtès 221a104248
gnu: perf: Restore use of dependencies.
* gnu/packages/linux.scm (perf)[arguments]: Remove C_INCLUDE_PATH from
 #:make-flags.  It is no longer needed since the switch to C_INCLUDE_PATH
in 2073b55e6b and would prevent
dependencies from being found.
2020-06-13 19:16:14 +02:00
Danny Milosavljevic 1eec6b0c01
gnu: guile-sqlite3: Update to 0.1.2.
* gnu/packages/guile.scm (guile-sqlite3): Update to 0.1.2.
2020-06-13 17:16:03 +02:00
Ricardo Wurmus 2f38e38fb5
Revert "gnu: node: Build shared library."
This reverts commit f9311eaa7c.
Adding "--shared" replaces the executable with the shared library, breaking
all users of the nodejs executable.
2020-06-13 17:02:26 +02:00
Ricardo Wurmus e602e7f271
gnu: r-v8: Use libnode instead of node.
* gnu/packages/cran.scm (r-v8)[inputs]: Replace node with libnode.
2020-06-13 17:02:26 +02:00
Ricardo Wurmus bb310a1976
gnu: Add libnode.
* gnu/packages/node.scm (libnode): New variable.
2020-06-13 17:02:26 +02:00
Mathieu Othacehe 4a04d49c2e
image: Remove 'maybe-with-target'.
* gnu/system/image.scm (maybe-with-target): Remove,
(system-image): adapt accordingly.
2020-06-13 16:58:57 +02:00
Mathieu Othacehe 478d1270ce
install: final: Add some logging.
* gnu/installer/final.scm (umount-cow-store): Add some logging.
2020-06-13 15:21:20 +02:00
Mathieu Othacehe f292d4719d
image: Add 'target' support.
* gnu/image.scm (<image>)[target]: New field,
(image-target): new public method.
* gnu/system/image.scm (hurd-disk-image): Set "i586-pc-gnu" as image 'target'
field,
(maybe-with-target): new procedure,
(system-image): honor image 'target' field using the above procedure.
2020-06-13 15:20:52 +02:00
Jan (janneke) Nieuwenhuizen 7ca533c723
image: Make 'find-image' non-monadic.
* gnu/system/image.scm (find-image): Make non-monadic.  Add 'target'
parameter.
* gnu/tests/install.scm (run-install): Update caller,
passing (%current-target-system).
* guix/scripts/system.scm (perform-action): Likewise.
2020-06-13 15:03:55 +02:00
Christopher Baines 3857aba7ab
gnome: gnome-desktop: Add bubblewrap as an input.
This is expected to be available, oddly as libseccomp is available.  These
changes fix thumbnails for Nautilus.

* gnu/packages/gnome.scm (gnome-desktop)[arguments]: Add 'patch-bubblewrap
phase.
[inputs]: Add bubblewrap.
2020-06-13 12:02:13 +01:00
Michael Rohleder e51175f686
gnu: emacs-debbugs: Update to 0.23.
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.23.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2020-06-13 17:19:21 +08:00
Jan (janneke) Nieuwenhuizen 7304cb0a23
services: hurd: Remove deprecated 'hurd-getty-service' wrapper.
* gnu/services/hurd.scm (hurd-getty-service): Remove.
2020-06-13 10:04:51 +02:00
Jan (janneke) Nieuwenhuizen 60fdd9e389
system: hurd: Remove 'cross-hurd-image' hack.
The initial

    guix build -f gnu/system/hurd.scm

hack has been superseded by regular guix system (cross) build.

* gnu/system/hurd.scm (compile-manifest, cross-hurd-image): Remove.
2020-06-13 09:11:47 +02:00
Jan (janneke) Nieuwenhuizen edbc067138
system: bare-hurd.tmpl: Add openssh-sans-x client and service.
* gnu/system/examples/bare-hurd.tmpl (%hurd-os)[packages]: Add openssh-sans-x.
[services]: Add openssh-service.  Add example usage.
2020-06-13 09:11:47 +02:00
Ricardo Wurmus 9ae4bd0b77
gnu: r-mzr: Update to 2.22.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.22.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:02 +02:00
Ricardo Wurmus 6b9e3b92c4
gnu: r-biodist: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.60.0.
2020-06-13 01:20:02 +02:00
Ricardo Wurmus 6a88291d1a
gnu: r-biocworkflowtools: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.14.0.
2020-06-13 01:20:02 +02:00
Ricardo Wurmus 723fa00d11
gnu: r-biocset: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.2.1.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:02 +02:00
Ricardo Wurmus 1759a13d6e
gnu: r-biocpkgtools: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.6.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 132abe5fcc
gnu: r-biocor: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.12.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 1c51821593
gnu: r-bioconcotk: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.8.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 4091eae2bc
gnu: r-multiassayexperiment: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.14.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus b56a3462ad
gnu: r-experimenthub: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 1.14.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 543c63f2ae
gnu: r-biocgraph: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.50.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 8b71b14158
gnu: r-bioccasestudies: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-bioccasestudies): Update to 1.50.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus a74a427bd8
gnu: r-ebarrays: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.52.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus affb4ab351
gnu: r-reactomepa: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.32.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 29b1702799
gnu: r-graphite: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.34.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus e09ca033f4
gnu: r-biobroom: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.20.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus c8cbde9ff6
gnu: r-bioassayr: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.26.0.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus 06908a73fc
gnu: r-chemminer: Update to 3.40.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.40.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:01 +02:00
Ricardo Wurmus d0badcc180
gnu: r-bigpint: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.4.0.
[propagated-inputs]: Add r-delayedarray and r-summarizedexperiment.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus eef9c99cd8
gnu: r-bigmemoryextras: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-bigmemoryextras): Update to 1.36.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus f31edb0191
gnu: r-biggr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.24.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus 3116998610
gnu: r-hyperdraw: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.40.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus 0ff724616b
gnu: r-hypergraph: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.60.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus d65bdbb2cb
gnu: r-rsbml: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.46.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus a54fd40994
gnu: r-bifet: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.8.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus 7642517336
gnu: r-bicare: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.46.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus 2415576ecb
gnu: r-bhc: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.40.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus de91f15a74
gnu: r-bgx: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.54.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus 296992be08
gnu: r-bgmix: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.48.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus a9148d0686
gnu: r-unifiedwmwqpcr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.24.0.
2020-06-13 01:20:00 +02:00
Ricardo Wurmus 518050a75b
gnu: r-htqpcr: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.42.0.
2020-06-13 01:19:59 +02:00
Ricardo Wurmus fbbaf5ae64
gnu: r-variancepartition: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.18.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:59 +02:00
Ricardo Wurmus 41f7fe4aa9
gnu: r-variantfiltering: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.24.0.
2020-06-13 01:19:59 +02:00
Ricardo Wurmus 49dd504192
gnu: r-timeseriesexperiment: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.6.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:59 +02:00
Ricardo Wurmus 12b255f213
gnu: r-wavcluster: Update to 2.22.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.22.0.
[native-inputs]: Add r-knitr.
2020-06-13 01:19:59 +02:00
Ricardo Wurmus efb44ebca4
gnu: r-reqon: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.34.0.
2020-06-13 01:19:59 +02:00