me
/
guix
Archived
1
0
Fork 0
Commit Graph

52044 Commits (bb357c509e1c017e1fef5aa5f4d05beea0c25157)

Author SHA1 Message Date
Lars-Dominik Braun 510472f865
gnu: python-pypika: Update to 0.37.2.
* gnu/packages/databases.scm (python-pypika): Update to 0.37.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-29 15:12:15 -04:00
Lars-Dominik Braun 4b800bff80
gnu: python-aiosqlite: Update to 0.12.0.
* gnu/packages/databases.scm (python-aiosqlite): Update to 0.12.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-29 15:12:15 -04:00
Leo Famulari f224a8bb79
gnu: OpenLDAP: Update to 2.4.50 [fixes CVE-2019-{13057,13565}].
* gnu/packages/openldap.scm (openldap)[replacement]: Use openldap-2.4.50.
(openldap/fixed): Replace with ...
(openldap-2.4.50): ... new variable.
* gnu/packages/patches/openldap-CVE-2020-12243.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-04-29 13:44:10 -04:00
Tobias Geerinckx-Rice 19987f5efe
gnu: foo2zjs: Update to 20200426.
* gnu/packages/cups.scm (foo2zjs): Update to 20200426.
2020-04-29 19:31:23 +02:00
Oleg Pykhalov 587ccf4c79
gnu: emacs-vterm: Update to 0-1.e63bd65.
* gnu/packages/emacs-xyz.scm (emacs-vterm): Update to 0-1.e63bd65.
2020-04-29 20:10:33 +03:00
pinoaffe 1cc9947a53
gnu: Add emacs-kakoune.
* gnu/packages/emacs-xyz.scm (emacs-kakoune): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-29 16:33:35 +02:00
pinoaffe 6d25f29143
gnu: Add emacs-ryo-modal.
* gnu/packages/emacs-xyz.scm (emacs-ryo-modal): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-29 16:29:53 +02:00
Masaya Tojo 373c0dc95c
gnu: Add emacs-twittering-mode.
* gnu/packages/emacs-xyz.scm (emacs-twittering-mode): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-29 16:26:21 +02:00
Mathieu Othacehe c537d2bcb7
tests: install: Fix device usage.
This is a follow-up of a860eddbbd. Guided
installation tests are now run from an ISO image. Hence the main block device
is vda and not vdb anymore.

* gnu/tests/install.scm (installation-target-os-for-gui-tests): Use
%minimal-os-on-vda instead of %minimal-os.
(%minimal-os-on-vda): Make sure that it replicates the config of %minimal-os.
2020-04-29 15:30:14 +02:00
Ricardo Wurmus e9f93cd5f7
gnu: Add python-sphinx-autobuild.
* gnu/packages/sphinx.scm (python-sphinx-autobuild): New variable.
2020-04-29 13:46:07 +02:00
Ricardo Wurmus ff5ca61d15
gnu: Add python-doc8.
* gnu/packages/python-xyz.scm (python-doc8): New variable.
2020-04-29 13:46:07 +02:00
Ricardo Wurmus d0e0b865e1
gnu: Add python-livereload.
* gnu/packages/python-web.scm (python-livereload): New variable.
2020-04-29 13:46:07 +02:00
Ricardo Wurmus d08782d16c
gnu: Add python-port-for.
* gnu/packages/python-web.scm (python-port-for): New variable.
2020-04-29 13:46:07 +02:00
Ricardo Wurmus 39a96b99fe
gnu: Add python-restructuredtext-lint.
* gnu/packages/python-xyz.scm (python-restructuredtext-lint): New variable.
2020-04-29 13:46:07 +02:00
Raghav Gururajan 27cb52a20b
gnu: gnome-calendar: Propagate evolution-data-server.
* gnu/packages/gnome.scm (gnome-calendar)[inputs]: Move evolution-data-server
from here...
[propagated-inputs]: ...to here.

Fixes <https://bugs.gnu.org/40686>.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-29 13:29:16 +02:00
Ricardo Wurmus e979cea905
gnu: Remove python2-ws4py-for-kaldi-gstreamer-server.
* gnu/packages/python-web.scm (python2-ws4py-for-kaldi-gstreamer-server):
Remove variable.
2020-04-29 13:29:16 +02:00
Ricardo Wurmus 1228c2abcf
gnu: kaldi-gstreamer-server: Update to 0-2.f68cab4.
* gnu/packages/machine-learning.scm (kaldi-gstreamer-server): Update to
0-2.f68cab4.
[inputs]: Replace python-2 with python-wrapper, python2-pygobject with
python-pygobject, python2-pyyaml with python-pyyaml, and python2-tornado with
python-tornado; remove python2-ws4py-for-kaldi-gstreamer-server and
python2-futures.
2020-04-29 13:29:16 +02:00
Brice Waegeneire 8fe681b9ff
gnu: Add edid-decode.
* gnu/packages/hardware.scm (edid-decode): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-29 11:38:42 +02:00
Alexandros Theodotou 4f0f46e4af
gnu: zrythm: Update to 0.8.333.
* gnu/packages/music.scm (zrythm): Update to 0.8.333.
[inputs]: Add new dependencies graphviz and gtksourceview.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-29 10:58:05 +02:00
Paul Garlick da6539d17b
gnu: ikiwiki: Update to 3.20200202.3.
* gnu/packages/web.scm (ikiwiki): Update to 3.20200202.3.
2020-04-29 09:37:15 +01:00
Paul Garlick 2933cdf88e
gnu: ikiwiki: Translate documentation.
* gnu/packages/web.scm (ikiwiki)[inputs]: Add po4a.
[arguments]<#:phases>[patch-Makefile]: Rename to...
[arguments]<#:phases>[patch-Makefiles]: ...this.  Add build environment
paths to the PERL5LIB environment variable that is used by the 'po2wiki'
script.
2020-04-29 09:37:14 +01:00
Paul Garlick cf47084a88
gnu: ikiwiki: Add missing inputs.
* gnu/packages/web.scm (ikiwiki)[inputs]: Add perl-authen-passphrase,
perl-file-mimeinfo, perl-mail-sendmail and perl-xml-twig.
2020-04-29 09:37:13 +01:00
Paul Garlick b7392ecbba
gnu: ikiwiki: Propagate some inputs.
* gnu/packages/web.scm (ikiwiki)[inputs]: Move perl-html-parser,
perl-html-scrubber, perl-html-template, perl-json,
perl-text-markdown-discount, perl-uri and perl-yaml-libyaml to...
[propagated-inputs]: ...here.  New field.
2020-04-29 09:37:12 +01:00
Paul Garlick 732ffac3bc
gnu: ikiwiki: Build perl inputs for target architecture.
* gnu/packages/web.scm (ikiwiki)[native-inputs]: Move perl dependencies ...
[inputs]: ...to here.
2020-04-29 09:37:11 +01:00
Paul Garlick add3e168bb
gnu: ikiwiki: Fetch sources from git repository.
* gnu/packages/web.scm (ikiwiki)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[source](snippet): New field.
[arguments]<#:phases>[set-modification-times]: New phase.
2020-04-29 09:36:29 +01:00
Guillaume Le Vaillant cf480830e2
gnu: gnuradio: Fix search paths for third-party blocks.
* gnu/packages/radio.scm (gnuradio)[native-search-paths]: Add definition of
  the GRC_BLOCKS_PATH variable.
2020-04-29 10:23:23 +02:00
Mathieu Othacehe be3abf28af
tests: install: Fix gui-installed-os test.
This is a follow-up of a860eddbbd. If using an
ISO, the main disk is vda and not vdb anymore.

* gnu/tests/install.scm (installation-target-os-for-gui-tests): Use vda2 as
swap partition.
2020-04-29 10:12:55 +02:00
Mathieu Othacehe ae1a0f7583
tests: install: Increase virtual machine RAM.
It seems that 'guix system init' is consuming more than the 800M of RAM
currently allocated. Until this is understood, bump the limit to 1.2G.

Reported here:
https://lists.gnu.org/archive/html/bug-guix/2020-04/msg00519.html

* gnu/tests/install.scm (run-install): Bump RAM to 1.2G.
2020-04-29 10:08:54 +02:00
Guillaume Le Vaillant f93eebbf9c
gnu: Add xnec2c.
* gnu/packages/radio.scm (xnec2c): New variable.
2020-04-29 01:17:37 +02:00
Ludovic Courtès 1797fe1321
gnu: guile-json: Update to 3.5.0.
* gnu/packages/guile.scm (guile-json-3): Update to 3.5.0.
2020-04-28 23:28:17 +02:00
Ludovic Courtès ce0f1b1eef
gnu: guix: Update to 619f918.
* gnu/packages/package-management.scm (guix): Update to 619f918.
2020-04-28 23:28:17 +02:00
Efraim Flashner 0b25812872
gnu: openldap: Fix CVE-2020-12243.
* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap/fixed): New variable.
* gnu/packages/patches/openldap-CVE-2020-12243.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2020-04-28 22:52:20 +03:00
Efraim Flashner cd8c419722
gnu: valgrind: Update source uri.
* gnu/packages/valgrind.scm (valgrind)[source]: Remove valgrind host,
add sourceware host.
[home-page]: Use https.
2020-04-28 22:33:40 +03:00
Pierre Neidhardt 27112236ce
gnu: sbcl: Update to 2.0.4.
* gnu/packages/lisp.scm (sbcl): Update to 2.0.4.
2020-04-28 21:10:46 +02:00
Pierre Neidhardt a84b7a4af5
gnu: sbcl-parenscript: Update to 2.7.1.
* gnu/packages/lisp-xyz.scm (sbcl-parenscript): Update to 2.7.1.
2020-04-28 21:10:46 +02:00
Diego Nicola Barbato 19e1f12ce4
gnu: emacs-telega: Test Emacs environment on startup.
Print a more helpful error message when someone attempts to run Telega on an
incompatible Emacs (e.g a 32-bit Emacs without wide ints).

* gnu/packages/patches/emacs-telega-test-env.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs-xyz.scm (emacs-telega)[source]: Use it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-28 20:44:30 +03:00
Diego Nicola Barbato a663b7040c
gnu: emacs-telega: Build with emacs-wide-int on 32-bit systems.
Fixes <https://bugs.gnu.org/39406>.
Reported by <lmedeiros@riseup.net>.

* gnu/packages/emacs-xyz.scm (emacs-telega)[native-inputs]: Replace emacs with
emacs-wide-int on 32-bit systems.  This is needed because Telega requires
64-bit wide ints.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-28 20:44:30 +03:00
Diego Nicola Barbato abbca232ca
gnu: Add emacs-wide-int.
* gnu/packages/emacs.scm (emacs-wide-int): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-28 20:44:27 +03:00
Christopher Lemmer Webber b2c1d4a273
gnu: Add emacs-magit-annex.
* gnu/packages/emacs-xyz.scm (emacs-magit-annex): New variable.
2020-04-28 12:30:41 -04:00
Alexandros Theodotou ae0f26b8f4
gnu: lv2: Update to 1.18.0.
* gnu/packages/audio.scm (lv2): Update to 1.18.0.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-28 18:20:28 +02:00
Nicolas Goaziou 3b33e0e4ba
gnu: kakoune: Update to 2020.01.16.
* gnu/packages/text-editors.scm (kakoune): Update to 2020.01.16.
2020-04-28 18:18:44 +02:00
John Soo 9615c8511f
gnu: emacs-evil-org: Update to 1.0.2.
* gnu/packages/emacs-xyz.scm (emacs-evil-org): Update to 1.0.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-28 17:30:50 +02:00
Joseph LaFreniere f15d324afa
gnu: emacs-sx: Update to 20191229.
* gnu/packages/emacs-xyz.scm (emacs-sx): Update to 20191229.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-28 17:29:51 +02:00
Joseph LaFreniere b3d04190f4
gnu: Add emacs-toml-mode.
* gnu/packages/emacs-xyz.scm (emacs-toml-mode): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-28 17:27:47 +02:00
Marius Bakke 085948fbfc
gnu: ungoogled-chromium: Update to 81.0.4044.129-0.c2a89fb [security fixes].
This fixes CVE-2020-6462 and CVE-2020-6461.

* gnu/packages/chromium.scm (%chromium-version): Set to 81.0.4044.129.
(%ungoogled-revision): Set to c2a89fb6b5b559c826796c811741fa8ed3e11de8.
(%chromium-origin, %ungoogled-origin): Update hashes.
2020-04-28 14:38:38 +02:00
Ricardo Wurmus 545e12f40d
gnu: Add variant-tools.
* gnu/packages/bioinformatics.scm (variant-tools): New variable.
2020-04-28 12:23:28 +02:00
Ricardo Wurmus 0b2c883828
gnu: Add hdf5-blosc.
* gnu/packages/maths.scm (hdf5-blosc): New variable.
2020-04-28 12:23:28 +02:00
Ricardo Wurmus 9a2fcb6325
gnu: Add c-blosc.
* gnu/packages/compression.scm (c-blosc): New variable.
2020-04-28 12:23:28 +02:00
Boris A. Dekshteyn 83812f34d7
gnu: Add kbdd-0.7.1
* gnu/packages/xdisorg.scm (kbdd): New variable.

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-28 11:51:06 +02:00
Pierre Neidhardt 8ac4be51de
gnu: ecl: Update to 20.4.24.
* gnu/packages/lisp.scm (ecl): Update to 20.4.24.
[native-inputs]: Add texinfo to make the manual.
[license]: Set to lgpl2.1+.
2020-04-28 11:47:46 +02:00
Pierre Neidhardt 143eaa82d6
gnu: sbcl-cl-cffi-gtk: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:46 +02:00
Pierre Neidhardt 80d8c00c84
gnu: sbcl-cl-cffi-gtk-gdk: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
Pierre Neidhardt 2666a3361e
gnu: sbcl-cl-cffi-gtk-gdk-pixbuf: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gdk-pixbuf)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
Pierre Neidhardt d27f033f97
gnu: sbcl-cl-cffi-gtk-pango: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-pango)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
Pierre Neidhardt 8f46a9d67f
gnu: sbcl-cl-cffi-gtk-cairo: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-cairo)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
Pierre Neidhardt 6a7f366864
gnu: sbcl-cl-cffi-gtk-gio: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gio)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
Pierre Neidhardt eac71f54fe
gnu: sbcl-cl-cffi-gtk-gobject: Link source to parent to reduce closure size.
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk-gobject)[arguments]: Replace source
  folder with link to the same folder in the sbcl-cl-cffi-gtk-glib dependency.
2020-04-28 11:47:45 +02:00
Pierre Neidhardt ef3cc2d883
gnu: Add emacs-trashed.
* gnu/packages/emacs-xyz.scm (emacs-trashed): New variable.
2020-04-28 11:47:45 +02:00
Guillaume Le Vaillant 62d45e463c
gnu: gnuradio-osmosdr: Add hackrf support.
* gnu/packages/radio.scm (gnuradio-osmosdr)[inputs]: Add hackrf.
2020-04-28 10:17:08 +02:00
Christopher Howard 79c4fb4f36
gnu: Add hackrf.
* gnu/packages/radio.scm (hackrf): New variable.

Co-authored-by: Guillaume Le Vaillant <glv@posteo.net>
2020-04-28 10:17:08 +02:00
Roel Janssen 0ae8505288
gnu: hpcguix-web: Use guile3.0-guix.
* gnu/packages/web.scm (hpcguix-web): Update to latest revision and use
  guile3.0 inputs.
2020-04-28 10:13:30 +02:00
Konrad Hinsen d9e9a26176
gnu: python-scikit-learn: Make python-joblib a propagated input.
* gnu/packages/machine-learning.scm (python-scikit-learn)
[native-inputs]: Move 'python-joblib' to ...
[propagated-inputs]: ... here.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-28 09:34:29 +02:00
Ricardo Wurmus b3cf5f8601
gnu: gst-kaldi-nnet2-online: Update to 0-2.cb227ef.
* gnu/packages/machine-learning.scm (gst-kaldi-nnet2-online): Update to
0-2.cb227ef.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus 0877b74f6e
gnu: kaldi: Update to 0-2.d4791c0.
* gnu/packages/machine-learning.scm (kaldi): Update to 0-2.d4791c0.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus 9c726c485a
gnu: r-hdf5array: Update to 1.14.4.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.4.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus cda0683295
gnu: r-seurat: Update to 3.1.5.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.5.
[propagated-inputs]: Remove r-metap.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus ed720abc26
gnu: r-topicmodels: Update to 0.2-11.
* gnu/packages/cran.scm (r-topicmodels): Update to 0.2-11.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus 1d9e71ed29
gnu: r-stopwords: Update to 2.0.
* gnu/packages/cran.scm (r-stopwords): Update to 2.0.
[propagated-inputs]: Add r-desc and r-usethis.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus 2c439cae92
gnu: r-fda: Update to 5.1.4.
* gnu/packages/cran.scm (r-fda): Update to 5.1.4.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus e1fe5e9bed
gnu: r-abtest: Update to 0.2.1.
* gnu/packages/cran.scm (r-abtest): Update to 0.2.1.
[propagated-inputs]: Add r-qgam; remove r-vgam.
2020-04-28 08:44:04 +02:00
Ricardo Wurmus 169f9fe13a
gnu: Add r-qgam.
* gnu/packages/cran.scm (r-qgam): New variable.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 5ffe706b84
gnu: r-systemfonts: Update to 0.2.0.
* gnu/packages/cran.scm (r-systemfonts): Update to 0.2.0.
[inputs]: Remove freetype.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 8165bf6d90
gnu: r-dalex: Update to 1.2.0.
* gnu/packages/cran.scm (r-dalex): Update to 1.2.0.
[propagated-inputs]: Add r-ibreakdown and r-ingredients.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 1816cb262c
gnu: r-rex: Update to 1.2.0.
* gnu/packages/cran.scm (r-rex): Update to 1.2.0.
[propagated-inputs]: Remove r-magrittr.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 838ec254a0
gnu: r-optparse: Update to 1.6.6.
* gnu/packages/cran.scm (r-optparse): Update to 1.6.6.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus bf4e440c19
gnu: r-sf: Update to 0.9-2.
* gnu/packages/cran.scm (r-sf): Update to 0.9-2.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 5123ec7858
gnu: r-future-apply: Update to 1.5.0.
* gnu/packages/cran.scm (r-future-apply): Update to 1.5.0.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus c6eb1fe616
gnu: r-etm: Update to 1.1.
* gnu/packages/cran.scm (r-etm): Update to 1.1.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus fbcbf8d586
gnu: r-future: Update to 1.17.0.
* gnu/packages/cran.scm (r-future): Update to 1.17.0.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus d62d838bf9
gnu: r-protviz: Update to 0.6.4.
* gnu/packages/cran.scm (r-protviz): Update to 0.6.4.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 71c0a61cac
gnu: r-rgl: Update to 0.100.54.
* gnu/packages/cran.scm (r-rgl): Update to 0.100.54.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus e2a50e5ec4
gnu: r-ggeffects: Update to 0.14.3.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.14.3.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 09410f17d2
gnu: r-bayestestr: Update to 0.6.0.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.6.0.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 27588b365f
gnu: r-emmeans: Update to 1.4.6.
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.6.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:03 +02:00
Ricardo Wurmus 09bb872aff
gnu: r-raster: Update to 3.1-5.
* gnu/packages/cran.scm (r-raster): Update to 3.1-5.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 35f84a7f27
gnu: r-insight: Update to 0.8.3.
* gnu/packages/cran.scm (r-insight): Update to 0.8.3.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus f1f77bb64e
gnu: r-tinytex: Update to 0.22.
* gnu/packages/cran.scm (r-tinytex): Update to 0.22.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus e965442b38
gnu: r-tsp: Update to 1.1-10.
* gnu/packages/cran.scm (r-tsp): Update to 1.1-10.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 839c39b178
gnu: r-broom: Update to 0.5.6.
* gnu/packages/cran.scm (r-broom): Update to 0.5.6.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 92d81a5e5b
gnu: r-distillery: Update to 1.0-7.
* gnu/packages/cran.scm (r-distillery): Update to 1.0-7.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 4c0cf66cfc
gnu: r-ff: Update to 2.2-14.2.
* gnu/packages/cran.scm (r-ff): Update to 2.2-14.2.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus d911e22af3
gnu: r-powerlaw: Update to 0.70.6.
* gnu/packages/cran.scm (r-powerlaw): Update to 0.70.6.
[propagated-inputs]: Remove r-vgam; add r-pracma.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 92f5ed2fd7
gnu: r-shinyfiles: Update to 0.8.0.
* gnu/packages/cran.scm (r-shinyfiles): Update to 0.8.0.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 50f298a54f
gnu: Add r-ibreakdown.
* gnu/packages/cran.scm (r-ibreakdown): New variable.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus befa394f45
gnu: Add r-ingredients.
* gnu/packages/cran.scm (r-ingredients): New variable.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus d29cd83bd8
gnu: r-purrr: Update to 0.3.4.
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.4.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 0e3003930e
gnu: r-plotrix: Update to 3.7-8.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-8.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 67aced6323
gnu: r-withr: Update to 2.2.0.
* gnu/packages/statistics.scm (r-withr): Update to 2.2.0.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:02 +02:00
Ricardo Wurmus 7ef5f77b91
gnu: r-xml2: Update to 1.3.2.
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.2.
2020-04-28 08:44:01 +02:00
Ricardo Wurmus 568d1d7bfc
gnu: r-dbplyr: Update to 1.4.3.
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.3.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Add r-knitr.
2020-04-28 08:44:01 +02:00
Ricardo Wurmus 666d97964a
gnu: r-tibble: Update to 3.0.1.
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.1.
2020-04-28 08:44:01 +02:00
Ricardo Wurmus 288ab9039b
gnu: r-foreign: Update to 0.8-78.
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-78.
2020-04-28 08:44:01 +02:00
Ricardo Wurmus c1dc7858d7
gnu: r-with-tests, r-minimal: Update to 4.0.0.
* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.0.
(r-with-tests)[arguments]: Add phase "set-locales".
[native-inputs]: Add texlive-ae, texlive-inconsolata, and
texlive-latex-xkeyval to texlive-union.
[inputs]: Replace pcre with pcre2.
2020-04-28 08:44:01 +02:00
Björn Höfling 89909327d0
gnu: stellarium: Update to 0.20.1.
* gnu/packages/astronomy.scm (stellarium): Update to 0.20.1.
2020-04-28 00:23:35 +02:00
Roel Janssen 78799a6fdc
gnu: Update minimap2 to 2.17.
* gnu/packages/bioinformatics.scm (minimap2): Update to 2.17.
2020-04-27 21:34:10 +02:00
Oleg Pykhalov 693d0fffc8
gnu: Add sbcl-stumpwm-swm-gaps.
* gnu/packages/wm.scm (sbcl-stumpwm-swm-gaps): New variable.
2020-04-27 22:21:35 +03:00
Vincent Legoll bb6d9e2633
gnu: tarsplitter: Fix typo in description (spilt/split).
* gnu/packages/compression.scm (tarsplitter)[description]: Fix typo.
2020-04-27 20:43:32 +02:00
Alex McGrath 58a361fef4
gnu: Add wf-recorder.
* gnu/packages/video.scm (wf-recorder): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-27 18:22:56 +02:00
Raghav Gururajan c53886a55a
gnu: ktsuss: Use setuid "su" and "sudo" commands.
This has ktsudo actually gain root access.

* gnu/packages/admin.scm (ktsuss)[arguments]: Instead of <sudo>/bin/{su,sudo}
file names, use the setuid' verrsions.
2020-04-27 18:17:24 +02:00
Boris A. Dekshteyn 138896e1ea
gnu: herbstluftwm: Update to 0.8.1
* gnu/packages/wm.scm: herbstluftwm: Update to 0.8.1

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-04-27 18:05:11 +02:00
Guillaume Le Vaillant f38ba7b65d
gnu: fldigi: Update to 4.1.12.
* gnu/packages/radio.scm (fldigi): Update to 4.1.12.
2020-04-27 16:54:34 +02:00
Jakub Kądziołka 2ef4d273d1
file-systems: mount the PID cgroup filesystem.
* gnu/system/file-systems.scm (%control-groups): Add "pids".
* gnu/services/docker.scm (docker-shepherd-service): Resolve a TODO.

This has allowed me to make a specific configuration of nsjail work.
2020-04-27 14:14:47 +02:00
Roel Janssen 639ae3f20b
gnu: Add python-scikit-rebate.
* gnu/packages/machine-learning.scm (python-scikit-rebate): New variable.
2020-04-27 13:54:43 +02:00
Roel Janssen ccf70a80a1
gnu: Add python-deeptools.
* gnu/packages/bioinformatics.scm (python-deeptools): New variable.
2020-04-27 13:43:05 +02:00
Roel Janssen c43edf6f30
gnu: Add python-deeptoolsintervals.
* gnu/packages/bioinformatics.scm (python-deeptoolsintervals): New variable.
2020-04-27 13:39:25 +02:00
Roel Janssen 4c24186ae0
gnu: Add python-bitarray.
* gnu/packages/python-xyz.scm (python-bitarray): New variable.
2020-04-27 13:09:02 +02:00
Roel Janssen 06fc1a5142
gnu: Add r-cummerbund.
* gnu/packages/bioconductor.scm (r-cummerbund): New variable.
2020-04-27 11:46:08 +02:00
Roel Janssen 91370829f4
gnu: Add r-inum.
* gnu/packages/cran.scm (r-inum): New variable.
2020-04-27 11:15:38 +02:00
Roel Janssen 415176e89d
gnu: Add r-ggpmisc.
* gnu/packages/cran.scm (r-ggpmisc): New variable.
2020-04-27 11:05:49 +02:00
Roel Janssen 0c0ef9c5a6
gnu: Add r-coverageview.
* gnu/packages/bioconductor.scm (r-coverageview): New variable.
2020-04-27 10:57:22 +02:00
Ricardo Wurmus d4f86c8b66
gnu: Add peek.
* gnu/packages/video.scm (peek): New variable.
2020-04-27 10:46:12 +02:00
Ricardo Wurmus c170a15996
gnu: emacs-org-reveal: Fix syntax error in description.
* gnu/packages/emacs-xyz.scm (emacs-org-reveal)[description]: Fix Texinfo
syntax error.
2020-04-27 10:45:51 +02:00
Ricardo Wurmus 320dd1195e
gnu: Add texlive-inconsolata.
* gnu/packages/tex.scm (texlive-inconsolata): New variable.
2020-04-27 10:45:51 +02:00
Roel Janssen 8ce240fdbf
gnu: Add r-bsgenome-hsapiens-ucsc-hg38.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg38): New variable.
2020-04-27 10:43:51 +02:00
Roel Janssen cb1ab0352b
gnu: Add r-karyoploter.
* gnu/packages/bioconductor.scm (r-karyoploter): New variable.
2020-04-27 10:37:42 +02:00
Roel Janssen e658838c62
gnu: Add r-bezier.
* gnu/packages/cran.scm (r-bezier): New variable.
2020-04-27 10:28:50 +02:00
Roel Janssen e8d435f7a2
gnu: Add r-ideoviz.
* gnu/packages/bioconductor.scm (r-ideoviz): New variable.
2020-04-27 10:24:20 +02:00
Roel Janssen df6c7f0487
gnu: Add r-ecp.
* gnu/packages/cran.scm (r-ecp): New variable.
2020-04-27 10:18:48 +02:00
Roel Janssen 8521d93854
gnu: Add r-reordercluster.
* gnu/packages/cran.scm (r-reordercluster): New variable.
2020-04-27 10:11:21 +02:00
Maxim Cournoyer 9c63165d9e
gnu: liblinphone: Move documentation and tester to separate outputs.
* gnu/packages/linphone.scm (liblinphone)[outputs]: Add a "doc" and "tester"
outputs.
[phases]: Add a separate-outputs phase.  Move the
glib-or-gtk-compile-schemas and glib-or-gtk-wrap phases after it.
2020-04-27 00:54:44 -04:00
Maxim Cournoyer 1ae4325734
gnu: liblinphone: Fix the input type of some dependencies.
Libraries being linked to such as libxml2, libiconv and zlib should appear as
'inputs' rather than 'native-inputs'.

* gnu/packages/linphone.scm (liblinphone)[native-inputs]: Move libiconv,
libxml2 and zlib to...
[inputs]: ...here.  Move eudev, python-pystache and python-six to
native-inputs.
2020-04-27 00:54:30 -04:00
Maxim Cournoyer 8472c26c25
gnu: liblinphone: Remove hicolor-icon-theme and murrine inputs.
Icon themes and theme engines are best left for the users to select and
install themselves.

* gnu/packages/linphone.scm (liblinphone)[inputs]: Remove hicolor-icon-theme.
[propagated-inputs]: Remove murrine.
2020-04-27 00:54:30 -04:00
Brice Waegeneire 3b177a6c33
gnu: Add loadable module to wireguard-linux-compat.
* gnu/packages/vpn.scm (wireguard-linux-compat)[build-system]: Replace
'gnu-build-system' by 'linux-module-build-system'.
[outputs]: Add 'kernel-patch'.
[arguments]: Adjust the build system. Add phases 'change-directory' and
'reset-cwd'. Rename phases 'build' to 'build-patch' and 'install' to
'install-patch'.
[description]: Mention the loadable module.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-04-26 18:24:28 -04:00
Ludovic Courtès 0e5c2d5e14
services: system: Initial entries are non-monadic.
* gnu/system.scm (operating-system-directory-base-entries): Return a
regular, non-monadic value.
* gnu/services.scm (system-derivation): Adjust accordingly.
* gnu/system/linux-container.scm (container-essential-services): Likewise.
2020-04-26 22:49:49 +02:00
Ludovic Courtès 45bd91334f
services: profile: Use a declarative profile.
* gnu/services.scm (packages->profile-entry): Use 'profile' instead of
'profile-derivation'.
2020-04-26 22:49:48 +02:00
Ludovic Courtès cda751105e
system: 'operating-system-directory-base-entries' uses 'profile'.
* gnu/system.scm (operating-system-directory-base-entries): Use a
declarative profile instead of 'profile-derivation'.
2020-04-26 22:49:48 +02:00
Roel Janssen 1408e2abeb
gnu: r-snplocs-hsapiens-dbsnp144-grch37: Fix description.
* gnu/packages/bioconductor.scm: Use two spaces after ending a sentence.
2020-04-26 21:47:19 +02:00
Roel Janssen 63daca1e92
gnu: Add r-snplocs-hsapiens-dbsnp144-grch37.
* gnu/packages/bioconductor.scm (r-snplocs-hsapiens-dbsnp144-grch37): New
  variable.
2020-04-26 21:34:49 +02:00
Maxim Cournoyer b58a22e5b7
gnu: Add hackneyed-x11-cursors.
* gnu/packages/xorg.scm (hackneyed-x11-cursors): New variable.
2020-04-26 15:32:10 -04:00
Roel Janssen 886125d791
gnu: Add r-motifbreakr.
* gnu/packages/bioconductor.scm (r-motifbreakr): New variable.
2020-04-26 21:24:03 +02:00
Roel Janssen 3699bcf54a
gnu: Add r-motifdb.
* gnu/packages/bioconductor.scm (r-motifdb): New variable.
2020-04-26 21:07:45 +02:00
Roel Janssen ec20858a6a
gnu: Add r-pasilla.
* gnu/packages/bioconductor.scm (r-pasilla): New variable.
2020-04-26 21:02:00 +02:00
Christopher Baines f476238431
gnu: guile3.0-chickadee: Rename to guile3.0-chickadee.
This avoids having to packages, both called guile-chickadee.

* gnu/packages/game-development.scm (guile3.0-chickadee)[name]: Change from
guile-chickadee to guile3.0-chickadee.
2020-04-26 19:44:33 +01:00
Christopher Baines 53aa66c3df
reconfigure: Don't call build-derivations for upgrade-services test
This commit adjusts the upgrade-services system test to not build anything
when computing the derivation for the system test.  I came across this when
looking at issues computing the system test derivations to store in the Guix
Data Service.

* gnu/tests/reconfigure.scm (run-upgrade-services-test): Remove the use of,
and definition for ensure-service-file.
2020-04-26 19:41:56 +01:00
Lars-Dominik Braun 910bf1f7a1
gnu: Add tarsplitter.
* gnu/packages/compression.scm (tarsplitter): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-26 21:07:43 +03:00
Leo Famulari ca4b55882a
gnu: Add rav1e.
* gnu/packages/video.scm (rav1e): New variable.
* gnu/packages/rust-apps.scm (rust-cbindgen-0.12, rust-cargo-c): New
variables.
* gnu/packages/crates-io.scm: Various new packages and upgrades.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-04-26 19:57:46 +03:00
Efraim Flashner ee8de73814
gnu: python-scanpy: Update to 1.4.6.
* gnu/packages/bioinformatics.scm (python-scanpy): Update to 1.4.6.
[arguments]: Add another network based test to skip.
[propagated-inputs]: Add python-tqdm.
2020-04-26 15:03:50 +03:00
Marius Bakke 2b829898c7
gnu: python-publicsuffix2: Adjust for Guile 3.0.
* gnu/packages/python-web.scm (python-publicsuffix2): Provide explicit
destination in calls to FORMAT.
2020-04-26 13:31:16 +02:00
Marius Bakke 52bdd30407
gnu: nim: Adjust for Guile 3.0.
* gnu/packages/nim.scm (nim)[arguments]: Provide explicit destination in calls
to FORMAT.
2020-04-26 13:31:16 +02:00
Marius Bakke 05e3ed302f
gnu: tpacpi-bat: Adjust for Guile 3.0.
* gnu/packages/linux.scm (tpacpi-bat)[arguments]: Provide explicit destination
in calls to FORMAT.
2020-04-26 13:31:16 +02:00
Marius Bakke 30d0f7fa8f
gnu: nmoldyn: Adjust for Guile 3.0.
* gnu/packages/chemistry.scm (nmoldyn)[arguments]: Provide explicit
destination in calls to FORMAT.
2020-04-26 13:31:16 +02:00
Marius Bakke 02de4b1da1
gnu: calcurse: Adjust for Guile 3.0.
* gnu/packages/calcurse.scm (calcurse)[arguments]: Provide explicit
destination in calls to FORMAT.
2020-04-26 13:31:15 +02:00
Marius Bakke f989dffd2c
gnu: thinkfan: Adjust for Guile 3.0.
* gnu/packages/linux.scm (thinkfan)[arguments]: Provide explicit destination
in calls to FORMAT (destination is no longer optional with Guile 3).
2020-04-26 13:31:15 +02:00
Eric Brown 660611e5f6
gnu: Add sylpheed.
* gnu/packages/mail.scm (sylpheed): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:47:19 +02:00
Raghav Gururajan 0745e28d66
gnu: Add xarchiver.
* gnu/packages/compression (xarchiver): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:25:59 +02:00
Giacomo Leidi 0bf66cbb72
gnu: Add python-osc.
* gnu/packages/python-xyz.scm (python-osc): New variable.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:15:09 +02:00
Evan Straw bb85018ceb
gnu: hugin: Update to 2019.2.0.
* gnu/packages/photo.scm (hugin): Update to 2019.2.0.

Signed-off-by: Mathieu Othacehe <m.othacehe@gmail.com>
2020-04-26 12:14:49 +02:00
Arun Isaac 018114baa7
gnu: maradns: Fix cross compilation.
* gnu/packages/dns.scm (maradns)[arguments]: Build make_32bit_tables for the
host.
2020-04-26 15:14:46 +05:30
Marius Bakke 796b387bc2
vm: Remove unused import.
* gnu/system/vm.scm: Do not import (gnu packages make-bootstrap).
2020-04-26 11:27:06 +02:00
Efraim Flashner 186f99f0f7
gnu: perl-glib: Update to 1.3292.
* gnu/packages/glib.scm (perl-glib): Update to 1.3292.
2020-04-26 10:22:14 +03:00
Leo Famulari a17e5092bc
gnu: svt-av1: Update to 0.8.2.
* gnu/packages/video.scm (svt-av1): Update to 0.8.2.
2020-04-25 22:26:49 -04:00
Vagrant Cascadian 9b7e41f2d7
gnu: arm-trusted-firmware: Update to 2.3.
* gnu/packages/firmware (make-arm-trusted-firmware): Update to 2.3.
  [source]: Remove hdcp patch.
* gnu/packages/patches/arm-trusted-firmware-disable-hdcp.patch: Remove patch.
* gnu/local.mk: Update accordingly.
2020-04-25 17:08:52 -07:00
Oleg Pykhalov 396eb9e1a9
gnu: Add sbcl-stumpwm-globalwindows.
* gnu/packages/wm.scm (sbcl-stumpwm-globalwindows): New variable.
2020-04-26 01:59:33 +03:00
Raghav Gururajan 5cca16968e
gnu: pavucontrol: Fix icons.
* gnu/packages/pulseaudio.scm (pavucontrol): Fix icons.
[build-system]: Use glib-or-gtk-build-system instead of gnu-build-system.
[inputs]: Add adwaita-icon-theme.  Re-order inputs.

Since the adwaita icon theme is hard-coded in the application, there is
no choice for the user anyway. So added adwaita-icon-theme to inputs and
changed build-system to glib-or-gtk to fix loading of icons.
2020-04-25 23:01:29 +02:00
Boris A. Dekshteyn 3a5d1c9b6b
gnu: fontmanager: Update to 0.7.7.
* gnu/packages/fontutils.scm (fontmanager): Update to 0.7.7.
2020-04-25 22:54:11 +02:00
Holger Peters b0ec8c675e
gnu: python-webob: Update to 1.8.3
* gnu/packages/python-web.scm (python-webob): Update to 1.8.3.
2020-04-25 22:38:11 +02:00
Holger Peters 82bd276d60
gnu: python-pastedeploy: Update to 2.1.0
* gnu/packages/python-web.scm (python-pastedeploy): Update to 2.1.0.
[arguments]: Add test-target.
[native-inputs]: Replace python-nose with python-pytest and python-pytest-runner.
2020-04-25 22:38:11 +02:00
Oskar Köök 731e92f0f8
gnu: elixir: Update to 1.10.3.
* gnu/packages/elixir.scm (elixir): Update to 1.10.3.
2020-04-25 22:26:48 +02:00
TomZ 813a88bb5a
gnu: flowee: Update to 2020.03.2
* gnu/packages/finance.scm (flowee): Update to 2020.03.2
2020-04-25 22:24:00 +02:00
Matthew Kraai ba11dddbfe
gnu: texlive-latex-pdfx: Fix typo.
* gnu/packages/tex.scm (texlive-latex-pdfx)[description]: Fix typo.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-25 22:23:20 +02:00
Efraim Flashner e56ab46ba0
gnu: python-reportlib: Update to 3.5.42.
* gnu/packages/pdf.scm (python-reportlib): Update to 3.5.42.
2020-04-25 22:51:37 +03:00
Efraim Flashner 2d8270ad56
gnu: python-reportlib: Add missing libraries.
* gnu/packages/pdf.scm (python-reportlib)[arguments]: Add
'use-system-libart' configure flag. Add custom phase to find libraries.
[inputs]: Add libart-lgpl, font-curve-files.
2020-04-25 22:46:34 +03:00
Pierre Neidhardt 8cf6d150b4
gnu: Add osicat.
* gnu/packages/lisp-xyz.scm (closicat, sbcl-osicat): New variables.
2020-04-25 19:45:29 +02:00
Mark H Weaver f84b036305
gnu: webkitgtk: Update to 2.28.2.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.28.2.
2020-04-24 23:20:09 -04:00
Mark H Weaver f2ce2d1274
gnu: linux-libre@5.6: Update deblob scripts.
* gnu/packages/linux.scm (deblob-scripts-5.6): Update to 5.6.7.
2020-04-24 19:06:13 -04:00
Pierre Langlois c10e8cf75e
gnu: u-boot: Update to 2020.04.
* gnu/packages/bootloaders (u-boot): Update to 2020.04.
  [native-inputs]: Replace sdl with sdl2.

Co-authored-by: Vagrant Cascadian <vagrant@debian.org>
2020-04-24 15:59:44 -07:00
Arun Isaac 0d36d0baea
gnu: Add maradns.
* gnu/packages/dns.scm (maradns): New variable.
2020-04-25 03:43:08 +05:30
Mark H Weaver 1317ff3259
gnu: linux-libre@4.14: Update to 4.14.177.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.177.
(linux-libre-4.14-pristine-source): Update hash.
2020-04-24 18:07:54 -04:00
Mark H Weaver 0c8941b504
gnu: linux-libre@4.9: Update to 4.9.220.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.220.
(linux-libre-4.9-pristine-source): Update hash.
2020-04-24 18:07:18 -04:00
Mark H Weaver 9c8b5d5e08
gnu: linux-libre@4.4: Update to 4.4.220.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.220.
(linux-libre-4.4-pristine-source): Update hash.
2020-04-24 18:06:14 -04:00
Jack Hill 45320ad808
gnu: pdfpc: Upgrade to 4.4.0
* gnu/packages/pdf.scm (pdfpc): Upgrade to 4.4.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2020-04-24 23:24:23 +02:00
Marius Bakke 5e57967652
gnu: python-pytest-timeout: Update to 1.3.4.
* gnu/packages/check.scm (python-pytest-timeout): Update to 1.3.4.
[arguments]: Override check phase.
[native-inputs]: Add PYTHON-PEXPECT.
2020-04-24 23:24:23 +02:00
Raghav Gururajan ddb0fef554
gnu: Add ktsuss.
* gnu/packages/admin.scm (ktsuss): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-04-24 22:10:57 +02:00
Raghav Gururajan bf37b49cdd
gnu: spacefm: Add dependencies for extra functionality.
* gnu/packages/lxde.scm (spacefm): Add dependencies for extra functionality.

Adding these inputs and making required changes to build-system+arguments;
provides icons, privilege-management and disk-management.
2020-04-24 22:03:09 +02:00
Marius Bakke 9b42918edd
gnu: guix: Update to 7dd0539.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-1.7dd0539.
2020-04-24 16:53:43 +02:00
Ludovic Courtès 40fd909e3d
gnu: biber: Downgrade to 2.11.
Biber 2.12 is incompatible with biblatex 3.11, which is what's currently
packaged.  This is a followup to 41a010875b.

* gnu/packages/tex.scm (biber): Downgrade to 2.11.
2020-04-24 16:22:02 +02:00
Ludovic Courtès 122b3cd68d
gnu: biber: Address test failures.
* gnu/packages/patches/biber-sortinithash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tex.scm (biber)[source]: Use it.
2020-04-24 16:21:13 +02:00
Ludovic Courtès 2520059bdb
pack: 'guix pack -R' wrapper correctly reports exit code.
Fixes <https://bugs.gnu.org/40816>.
Reported by Jan (janneke) Nieuwenhuizen <janneke@gnu.org>.

* gnu/packages/aux-files/run-in-namespace.c (main): In the 'default'
case, check 'WIFEXITED (status)' and exit with the corresponding code in
that case.  Exit with 255 in other cases.
* tests/guix-pack-relocatable.sh: Add test.
2020-04-24 16:21:13 +02:00
Ludovic Courtès 193192ca77
gnu: llvm: Add 10.0.0.
* gnu/packages/llvm.scm (llvm-10, clang-runtime-10, clang-10)
(clang-toolchain-10, llvm-9, clang-runtime-9, clang-9)
(clang-toolchain-9): New variables.
(llvm, clang, clang-runtime, clang-toolchain): Redefine as aliases to
the '-9' bindings.
* gnu/packages/patches/clang-10.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2020-04-24 16:21:13 +02:00
Naga Malleswari 4ac3461a80
gnu: Add r-rxnat.
* gnu/packages/cran.scm (r-rxnat): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:56:54 +02:00
Naga Malleswari 5b38f038f6
gnu: Add r-rcdd.
* gnu/packages/cran.scm (r-rcdd): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:54:42 +02:00
Naga Malleswari 53269e6971
gnu: Add r-dcv.
* gnu/packages/cran.scm (r-dcv): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:53:21 +02:00
Ricardo Wurmus 3a8ee5ef42
gnu: r-tea: Fix typo.
* gnu/packages/cran.scm (r-tea)[description]: Fix typo.
2020-04-24 15:51:52 +02:00
Naga Malleswari 26e5dab74a
gnu: Add r-stam.
* gnu/packages/cran.scm (r-stam): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:51:39 +02:00
Naga Malleswari d234006b38
gnu: Add r-grouped.
* gnu/packages/cran.scm (r-grouped): New variable.
2020-04-24 15:51:39 +02:00
Naga Malleswari aa3fdca85c
gnu: Add r-sgloptim.
* gnu/packages/cran.scm (r-sgloptim): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:51:39 +02:00
Naga Malleswari ea43d299fa
gnu: Add r-aws.
* gnu/packages/cran.scm (r-aws): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:51:38 +02:00
Naga Malleswari fe14871edd
gnu: Add r-awsmethods.
* gnu/packages/cran.scm (r-awsmethods): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:43:01 +02:00
Naga Malleswari ba07c7f067
gnu: Add r-tea.
* gnu/packages/cran.scm (r-tea): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-04-24 15:40:10 +02:00
Ricardo Wurmus a1d369f139
gnu: Add texlive-csquotes.
* gnu/packages/tex.scm (texlive-csquotes): New variable.
2020-04-24 15:19:35 +02:00