Fixes <http://bugs.gnu.org/22139>.
* guix/grafts.scm (graft-derivation): Rename to...
(graft-derivation/shallow): ... this.
(graft-origin-file-name, item->deriver, non-self-references)
(cumulative-grafts, graft-derivation): New procedures
* tests/grafts.scm ("graft-derivation, grafted item is a direct
dependency"): Clarify title. Use 'grafted' instead of 'graft' to refer
to the grafted derivation.
("graft-derivation, grafted item is an indirect dependency")
("graft-derivation, no dependencies on grafted output"): New tests.
* guix/packages.scm (input-graft): Change to take a package instead of
an input.
(input-cross-graft): Likewise.
(fold-bag-dependencies): New procedure.
(bag-grafts): Rewrite in terms of 'fold-bag-dependencies'.
* tests/packages.scm ("package-derivation, indirect grafts"): Comment out.
* doc/guix.texi (Security Updates): Mention run-time dependencies and
recursive grafting.
This amends part of c8e2688.
* doc/guix.texi (Binary Installation): Improve wording of some parts.
Fix Upstart example. Remove incorrect paragraph about locales.
Reinstate bit about reproducing the binary tarball.
* doc/guix.texi (Binary Installation): Provide some more details for binary
installation, in particular automatic starting of the daemon.
Signed-off-by: Andreas Enge <andreas@enge.fr>
* guix/gnu-maintenance.scm (xorg-package?, latest-xorg-release): New
private functions.
(%xorg-updater): New public variable.
* guix/scripts/refresh.scm (%updaters): Add %xorg-updater.
* doc/guix.texi (Invoking guix refresh): Mention the new updater.
Fixes <http://bugs.gnu.org/19816>.
* guix/scripts/environment.scm (evaluate-input-search-paths)
(build-inputs): Delete.
(evaluate-profile-search-paths, strip-input-name)
(package-or-package+output?, package-environment-inputs)
(build-environment, inputs->profile-derivations): New procedures.
(create-environment, show-search-paths, launch-environment)
(launch-environment/container): Replace 'inputs' argument
with 'profile' argument.
(package+propagated-inputs): Strip off names off of input tuples.
(options/resolve-packages): Handle input tuples that specify an output
in expressions.
(guix-environment): Convert inputs into a profile to use in the
environment. Remove non-package inputs such as origins from
environment inputs.
* doc/guix.texi ("invoking guix environment"): Document package+output
tuples for --expression option.
* tests/guix-environment.sh: Update tests.
* tests/guix-environment-container.sh: Likewise.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* doc/guix.texi (System Installation): Turn all subsections into
individual nodes.
(Limitations): Update the number of packages.
(Preparing for Installation)[Keyboard Layout, Networking, Disk
Partitionning]: New subsections. Move the 'cow-store' thing to...
(Proceeding with the Installation): ... here. Describe things in more
detail.
(Base Services): Add index entry for "keyboard layout".
Co-authored-by: Petter <petter@mykolab.ch>.
Fixes <http://bugs.gnu.org/22572>.
Reported by Mark H Weaver <mhw@netris.org>.
* gnu/system/locale.scm (%not-dot): New variable.
(denormalize-codeset, locale-name->definition): New procedures.
* gnu/system.scm (locale-name->definition*): New procedure.
(operating-system-locale-directory): Instead of raising an error, add
the missing locale.
* doc/guix.texi (Locales): Adjust accordingly.
Partly fixes <http://bugs.gnu.org/22039>.
* gnu/services/herd.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu/services/shepherd.scm (shepherd-service-canonical-name): New
procedure.
(shepherd-service-file): Export.
* guix/scripts/system.scm (upgrade-shepherd-services): New procedure.
(switch-to-system): Use it.
* guix/ui.scm (info): New procedure.
* doc/guix.texi (Invoking guix system): Mention system services.
Suggested by David Thompson <dthompson2@worcester.edu>
at <http://bugs.gnu.org/22402>.
* doc/guix.texi (Binary Installation): Explain how to make the Info
manual visible.
Suggested by <swedebugia@riseup.net>.
* doc/guix.texi (Using the Configuration System): Add
@unnumberedsubsubsec. Explain how to remove services from a list.
Mention (gnu system).
* guix/import/cran.scm (%bioconductor-updater,
latest-bioconductor-release, bioconductor-package?): New procedures.
(cran->guix-package): Support repositories other than CRAN.
(%bioconductor-url, %bioconductor-svn-url): New variables.
(description->package): Update signature to distinguish between packages
from different repositories.
(latest-release): Rename procedure ...
(latest-cran-release): ... to this.
(cran-package?): Do not assume all R packages are available on CRAN.
* tests/cran.scm: Update tests.
* guix/scripts/import/cran.scm: Add "--archive" option and default to
CRAN.
* guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater".
* doc/guix.texi: Document Bioconductor importer and updater.
* doc/images/bootstrap-packages.dot: New file.
* doc.am (DOT_FILES): Add it.
* doc/guix.texi (Bootstrapping): Show 'guix graph' commands. Includes
'images/bootstrap-packages' and comment it.
Ludovic Courtès
Ben Woodcroft
Mark H Weaver
George Clemmer
Chris Marusich
Andy Wingo
Andreas Enge
David Thompson
Alex Kost
Leo Famulari
Ricardo Wurmus