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Author SHA1 Message Date
Mathieu Othacehe e6a75d013d
gnu: lttng-tools: Update the hash. 
This is a follow-up of c53a5e7dc3.

* gnu/packages/instrumentation.scm (lttng-tools)[source]: Update it.
 2022-08-16 23:59:11 +02:00
Jonathan Brielmaier 195567304a
gnu: lttng-ust: Update source hash. 
This was forgotten in eca0227239.

* gnu/packages/instrumentation.scm (lttng-ust)[source]: Correct the hash.
 2022-08-16 23:02:20 +02:00
Liliana Marie Prikler 37cd553679
ui: Describe package outputs. 
* guix/ui.scm (package->recutils): Output outputs with their descriptions,
one per line.
* po/packages/Makevars (XGETTEXT_OPTIONS): Add ‘output-synopsis’ as keyword.
 2022-08-16 21:25:25 +02:00
jgart 0193f9dd03
gnu: Add cl-string-pokemonize. 
* gnu/packages/lisp-xyz.scm (cl-string-pokemonize): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2022-08-16 21:25:20 +02:00
Pierre-Henry Fröhring f41d75b75c
gnu: Add emacs-mini-frame. 
* gnu/packages/emacs-xyz.scm (emacs-mini-frame): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2022-08-16 21:19:35 +02:00
Ricardo Wurmus 8aab1f7c73
gnu: Add go-github-com-biogo-biogo. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-biogo): New variable.
 2022-08-16 16:52:15 +02:00
Ricardo Wurmus 2407416d0f
gnu: Add go-github-com-biogo-hts-fai. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-fai): New variable.
 2022-08-16 16:50:16 +02:00
Ricardo Wurmus 31e0ac6dcf
gnu: Add go-github-com-biogo-hts-csi. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-csi): New variable.
 2022-08-16 16:50:01 +02:00
Ricardo Wurmus b4f389e1b9
gnu: Add go-github-com-biogo-hts-cram. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-cram): New variable.
 2022-08-16 16:44:58 +02:00
Ricardo Wurmus ecb7dedaed
gnu: Add go-github-com-kortschak-utter. 
* gnu/packages/golang.scm (go-github-com-kortschak-utter): New variable.
 2022-08-16 16:44:42 +02:00
Ricardo Wurmus e9bec5bd40
gnu: Add go-github-com-biogo-hts-bgzf. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-bgzf): New variable.
 2022-08-16 16:28:33 +02:00
Ricardo Wurmus bb162a5103
gnu: Add go-github-com-biogo-hts-tabix. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-tabix): New variable.
 2022-08-16 16:28:23 +02:00
Ricardo Wurmus 4645a5d3f6
gnu: Add go-github-com-biogo-hts-sam. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-sam): New variable.
 2022-08-16 16:28:11 +02:00
Ricardo Wurmus b986325b13
gnu: Add go-github-com-biogo-hts-bam. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-bam): New variable.
 2022-08-16 16:23:04 +02:00
Ricardo Wurmus 2345cd49de
gnu: Add go-github-com-biogo-store-step. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-store-step): New variable.
 2022-08-16 16:18:57 +02:00
Ricardo Wurmus c42745ba39
gnu: Add go-github-com-biogo-store-llrb. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-store-llrb): New variable.
 2022-08-16 16:18:48 +02:00
Ricardo Wurmus 5fae9e158d
gnu: Add go-github-com-biogo-store-kdtree. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-store-kdtree): New variable.
 2022-08-16 16:18:40 +02:00
Ricardo Wurmus a33ee9bd51
gnu: Add go-github-com-biogo-store-interval. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-store-interval): New variable.
 2022-08-16 16:18:31 +02:00
Ricardo Wurmus 2b4dcc477b
gnu: Add go-github-com-biogo-graph. 
* gnu/packages/bioinformatics.scm (go-github-com-biogo-graph): New variable.
 2022-08-16 16:09:54 +02:00
Ricardo Wurmus 872e17ddc1
gnu: Add stpipeline. 
* gnu/packages/bioinformatics.scm (stpipeline): New variable.
 2022-08-16 15:22:07 +02:00
Ricardo Wurmus 9c2400c282
gnu: Add python-taggd. 
* gnu/packages/bioinformatics.scm (python-taggd): New variable.
 2022-08-16 15:22:07 +02:00
Ricardo Wurmus a60412019e
gnu: Add python-sqlitedict. 
* gnu/packages/databases.scm (python-sqlitedict): New variable.
 2022-08-16 15:22:06 +02:00
Ricardo Wurmus 752be79bf3
gnu: htseq: Update to 2.0.2. 
* gnu/packages/bioinformatics.scm (htseq): Update to 2.0.2.
[source]: Fetch from git repository.
[arguments]: Delete 'build phase; run tests with pytest in 'check phase.
[propagated-inputs]: Add python-matplotlib and python-pysam.
[inputs]: Remove python-matplotlib and python-pysam.
[native-inputs]: Add python-pandas, python-pytest, python-scipy, and swig.
[synopsis]: Update.
[description]: Update.
 2022-08-16 15:22:06 +02:00
Andrew Tropin 0598b5d143
gnu: emacs-geiser-guile: Update guile input to guile-3.0-latest. 
* gnu/packages/emacs-xyz.scm (emacs-geiser-guile)[inputs]: Update guile to
guile-3.0-latest.
 2022-08-16 09:20:45 +03:00
( ace7b5babe
gnu: terminals: Deprecate wterm. 
`wterm` no longer works with modern Wayland, and has been unmaintained
since early 2021. See issue #52029.

* gnu/packages/terminals.scm (wterm): Deprecate in favour of `foot`.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2022-08-16 09:21:52 +08:00
Marius Bakke 302b3cdca3
gnu: python-daemon: Remove unused input. 
* gnu/packages/python-xyz.scm (python-daemon)[native-inputs]: Remove
PYTHON-UNITTEST2.
 2022-08-16 00:43:46 +02:00
Marius Bakke b38df69c2c
gnu: python-case: Remove unused input. 
* gnu/packages/python-xyz.scm (python-case)[propagated-inputs]: Remove
PYTHON-UNITTEST2.
 2022-08-16 00:43:45 +02:00
Marius Bakke afdcd03689
gnu: python-posix-ipc: Remove unused input. 
* gnu/packages/python-xyz.scm (python-posix-ipc)[native-inputs]: Remove.
 2022-08-16 00:43:45 +02:00
Marius Bakke d23a04e52e
gnu: python-pyu2f: Remove unused inputs. 
* gnu/packages/python-crypto.scm (python-pyu2f)[native-inputs]: Remove.
 2022-08-16 00:43:45 +02:00
Marius Bakke 24834c2722
gnu: python-pymysql: Remove unused input. 
* gnu/packages/databases.scm (python-pymysql)[native-inputs]: Remove
PYTHON-UNITTEST2.
 2022-08-16 00:43:45 +02:00
Marius Bakke 715a5efc49
gnu: python-pyclipper: Update to 1.3.0.post3. 
* gnu/packages/python-xyz.scm (python-pyclipper): Update to 1.3.0.post3.
[source](uri): Use tarball instead of zipball.
[source](snippet): Adjust for renamed file.
[arguments]: Likewise.
[propagated-inputs]: Remove.
[native-inputs]: Remove PYTHON-UNITTEST2 and UNZIP.  Add PYTHON-SETUPTOOLS-SCM.
 2022-08-16 00:43:45 +02:00
Marius Bakke 90ec03cae3
gnu: python-ufo2ft: Add missing input. 
* gnu/packages/fontutils.scm (python-ufo2ft)[native-inputs]: Add
PYTHON-SETUPTOOLS-SCM.
 2022-08-16 00:43:44 +02:00
Marius Bakke 46b3fb82f8
gnu: python-afdko: Add missing input. 
* gnu/packages/fontutils.scm (python-afdko)[native-inputs]: Add
PYTHON-SETUPTOOLS-SCM.
 2022-08-16 00:43:44 +02:00
Marius Bakke b74744fee6
gnu: python-ufoprocessor: Add missing input. 
* gnu/packages/fontutils.scm (python-ufoprocessor)[native-inputs]: Add
PYTHON-SETUPTOOLS-SCM.
 2022-08-16 00:43:44 +02:00
Marius Bakke 5f2c529a59
gnu: python-fontparts: Add missing input. 
* gnu/packages/fontutils.scm (python-fontparts-bootstrap)[native-inputs]: Add
PYTHON-SETUPTOOLS-SCM.
 2022-08-16 00:43:44 +02:00
Marius Bakke a038bfc481
gnu: python-booleanoperations: Add missing input. 
* gnu/packages/graphics.scm (python-booleanoperations)[native-inputs]: Add
PYTHON-SETUPTOOLS-SCM.
 2022-08-16 00:43:44 +02:00
Marius Bakke faea55669f
gnu: python-mando: Update to 0.7.1. 
* gnu/packages/python-xyz.scm (python-mando): Update to 0.7.1.
[arguments]: Override check phase.
 2022-08-16 00:43:44 +02:00
Marius Bakke 46cb02c7cb
gnu: python-radon: Permit newer versions of mando. 
* gnu/packages/python-xyz.scm (python-radon)[arguments]: Add setup.py
substitution.
 2022-08-16 00:43:44 +02:00
Marius Bakke 389ae75a37
gnu: python-lz4: Update to 4.0.2. 
* gnu/packages/python-compression.scm (python-lz4): Update to 4.0.2.
[native-inputs]: Remove PYTHON-NOSE.  Add PYTHON-PKGCONFIG and PYTHON-PSUTIL.
[arguments]: Override check phase.
 2022-08-16 00:43:43 +02:00
Marius Bakke 7e0116740b
gnu: python-mypy: Update to 0.971. 
* gnu/packages/patches/python-mypy-12332.patch,
gnu/packages/patches/python-mypy-use-sys-path.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-check.scm (python-mypy): Update to 0.971.
[source](patches): Remove.
[arguments]: Skip one test.
 2022-08-16 00:43:43 +02:00
Marius Bakke 1e969dafb7
gnu: libreoffice: Remove obsolete workaround. 
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Don't pass LDFLAGS.
 2022-08-16 00:43:43 +02:00
Tobias Geerinckx-Rice 97386910fb
gnu: encodings: Update to 1.0.6. 
* gnu/packages/xorg.scm (encodings): Update to 1.0.6.
 2022-08-14 02:00:54 +02:00
Tobias Geerinckx-Rice 73eca39df7
gnu: mu: Update to 1.8.9. 
* gnu/packages/mail.scm (mu): Update to 1.8.9.
[arguments]: Adjust the 'patch-bin-references phase accordingly.
 2022-08-14 02:00:00 +02:00
Ricardo Wurmus c3c2dfdb5e
gnu: plink-ng: Build sources from 2.0 directory 
* gnu/packages/bioinformatics.scm (plink-ng)[arguments]: Disable tests; adjust
make flags; enter 2.0 directory in 'chdir phase; replace 'install phase.
[inputs]: Add zstd:lib.
 2022-08-15 18:08:20 +02:00
Tobias Geerinckx-Rice d248d8b519
gnu: rnnoise: Remove input labels. 
* gnu/packages/xiph.scm (rnnoise)[native-inputs]:
Remove input labels.
 2022-08-14 02:00:01 +02:00
Tobias Geerinckx-Rice 2388d2d3f7
gnu: rnnoise: Unhide and rename variable. 
* gnu/packages/xiph.scm (xiph-rnnoise): Rename to…
(rnnoise): …this.  Adjust all users.
[properties]: Remove HIDDEN? property as it is no longer ambiguous.
 2022-08-14 02:00:01 +02:00
Tobias Geerinckx-Rice 2790d118b2
gnu: noise-suppression-for-voice: Rename from ‘rnnoise’. 
This is a set of plug-ins *based on* Xiph's rnnoise package (also in Guix).

* gnu/packages/pulseaudio.scm (rnnoise): Rename this variable…
(noise-suppression-for-voice): …to this.
[noisetorch](inputs): Adjust its only user.
 2022-08-14 02:00:01 +02:00
Tobias Geerinckx-Rice 8e82a70a4f
gnu: noisetorch: Update to 0.12.2. 
* gnu/packages/pulseaudio.scm (noisetorch): Update to 0.12.2.
[source]: Switch to maintained fork.
[arguments]: Update all ‘paths’ accordingly.  Rename 'symlink-rnnoise
phase to 'copy-rnnoise-library and do so.  Remove 'gen-version.go phase.
Don't explicitly return #f from phases.
[home-page]: Update to match SOURCE.
 2022-08-14 02:00:01 +02:00
Tobias Geerinckx-Rice 39b77ed3aa
gnu: openvpn: Update to 2.5.7. 
* gnu/packages/vpn.scm (openvpn): Update to 2.5.7.
 2022-08-14 02:00:01 +02:00
Tobias Geerinckx-Rice 0d92088d5c
gnu: nftables: Update to 1.0.5. 
* gnu/packages/linux.scm (nftables): Update to 1.0.5.
 2022-08-14 02:00:01 +02:00