Ricardo Wurmus
|
e86eca3600
|
gnu: r-genomicranges: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.56.0.
Change-Id: If3a2bee7626fc0ff189baf5454ecd32ec924dccc
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2024-05-08 12:53:23 +02:00 |
|
Ricardo Wurmus
|
d8967c42bd
|
gnu: r-genomicfiles: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.40.0.
Change-Id: I388879e7bf8c79298aeea2e9efe919cacd03dfc3
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2024-05-08 12:53:23 +02:00 |
|
Ricardo Wurmus
|
5cbbe74dfb
|
gnu: r-genomicfeatures: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.56.0.
[propagated-inputs]: Remove r-biobase, r-biocio, r-biomart, r-httr, r-rjson, and r-rsqlite.
Change-Id: I6278eb17ce4257263d3461ae10c7592bc4ff2858
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2024-05-08 12:53:23 +02:00 |
|
Ricardo Wurmus
|
33d4483b83
|
gnu: r-genomicdatacommons: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-genomicdatacommons): Update to 1.28.0.
Change-Id: I806d1a8f81f9f4541e6b318c623078e018f0367c
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2024-05-08 12:53:23 +02:00 |
|
Ricardo Wurmus
|
f315a4f790
|
gnu: r-genomicalignments: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.40.0.
Change-Id: I01b78a49c0c4d1cd28181a2c135e987fd9106d7c
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2024-05-08 12:53:23 +02:00 |
|
Ricardo Wurmus
|
279dd07d97
|
gnu: r-genomeinfodb: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.40.0.
[propagated-inputs]: Remove r-rcurl; add r-ucsc-utils.
Change-Id: I5146dbd585fa622b50879832bdaa0034c38fd4ba
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2024-05-08 12:53:23 +02:00 |
|
Ricardo Wurmus
|
8e690a6950
|
gnu: r-genomation: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.36.0.
Change-Id: I55871cadc7e391f1c3af61a5ed83c36d7e8a5253
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2024-05-08 12:53:23 +02:00 |
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Ricardo Wurmus
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d69d0f84b8
|
gnu: r-geneoverlap: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.40.0.
Change-Id: I602463977ac37403ee938fd309f901ebd11d1f77
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
|
22a6c1f765
|
gnu: r-genefilter: Update to 1.86.0.
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.86.0.
Change-Id: Iab450b1502832422bb45ee7b00247368a6898818
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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cddd24c450
|
gnu: r-gage: Update to 2.54.0.
* gnu/packages/bioconductor.scm (r-gage): Update to 2.54.0.
Change-Id: Ie455bb98bca5d3d7a741ef0172d064a375cf1556
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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d0c40e12ae
|
gnu: r-fastseg: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.50.0.
Change-Id: I4ec7016587a6a497009b04b59a1fd33cdd72b9cb
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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d7efd3ea46
|
gnu: r-epidish: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-epidish): Update to 2.20.0.
Change-Id: I836109020ba9ae3cc0ed3a0b8334fd6ff0930c44
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2024-05-08 12:53:22 +02:00 |
|
Ricardo Wurmus
|
0f4c0d59c7
|
gnu: r-ensembldb: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.28.0.
Change-Id: If88b3d9dd605a4129b3602e680347a4a148312ae
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
|
5392532dbf
|
gnu: r-enmix: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-enmix): Update to 1.40.0.
Change-Id: I5e98695357d26e3aef02f25140cd25295ed6f783
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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a1cf3f862a
|
gnu: r-enhancedvolcano: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-enhancedvolcano): Update to 1.22.0.
Change-Id: I9390eb439700daf7ab53d5883688a05757004c99
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
|
30be4dea15
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gnu: r-edger: Update to 4.2.0.
* gnu/packages/bioconductor.scm (r-edger): Update to 4.2.0.
Change-Id: Ide6a7aaf2a313923dd1e6ff9e768dfce03010c34
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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02f37641c7
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gnu: r-edaseq: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.38.0.
Change-Id: I44c161680cf0d49d4b72b8ed4f40841a74cbf948
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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602331607d
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gnu: r-dittoseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.16.0.
Change-Id: I9159c299fd82883a2d03e2fa17399c1d24cb7c62
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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64474d5d84
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gnu: r-dirichletmultinomial: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.46.0.
Change-Id: I0ef2d8bbca26042d001babd7bd25120144bad7cc
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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0e9bde0048
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gnu: r-diffcyt: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.24.0.
Change-Id: Ib7c5cf3735f78eb183ce4dc17307ad863d16c010
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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2d5d0ab72f
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gnu: r-dexseq: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.50.0.
Change-Id: I5b695996799b23aeebf0545346264e3b02cf3ec5
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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4c5c6b070e
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gnu: r-deseq2: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.44.0.
Change-Id: I7108fee1c2bf927a43d339ee5640d4a1bed6a2f4
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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b30d4d1cc8
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gnu: r-complexheatmap: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.20.0.
Change-Id: I9b557819bac13ba00ee86dd43709c4e1b7517cde
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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1de2a99743
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gnu: r-chipseq: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.54.0.
Change-Id: If80fc00811bd2707cbba97a64c2efe46848a8b60
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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0298c87534
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gnu: r-chipseeker: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.40.0.
Change-Id: I6eb05f4da33610aa1ecb90ea75470bda1c184f0a
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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0b92bb1f1e
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gnu: r-category: Update to 2.70.0.
* gnu/packages/bioconductor.scm (r-category): Update to 2.70.0.
Change-Id: Ia102f873af5883aeba3379366953cecdec2be342
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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e6032ad668
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gnu: r-bsgenome: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.72.0.
Change-Id: Id0855145e079e607ab915ef9076c637059c81fd8
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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9a071ad941
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gnu: r-biovizbase: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.52.0.
Change-Id: I71ac5375c00fadedc44c4f027b236648b3e2a4cd
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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472ed71761
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gnu: r-biostrings: Update to 2.72.0.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.72.0.
Change-Id: I7ddcf26e34210dd6065fdd8c937e68f256fee43e
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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065b98f30d
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gnu: r-biocparallel: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.38.0.
Change-Id: I943f443a0f6f3182c9f7fd11f57e1bfabb6c04df
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2024-05-08 12:53:22 +02:00 |
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Ricardo Wurmus
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cfddce9f42
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gnu: r-biomart: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.60.0.
[propagated-inputs]: Remove r-httr and r-xml; add r-httr2.
Change-Id: I6460b29e2a4d92be9e4675ddf461f65f79585449
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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a1d32a9206
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gnu: r-biobase: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-biobase): Update to 2.64.0.
Change-Id: I5330e457bbabd007683ed869b539bd38a407df30
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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5970c028f0
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gnu: r-bamsignals: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.36.0.
Change-Id: I99174b5d88723a8e6606cf067353f2051bab39d1
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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9b11dc5b0b
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gnu: r-aroma-light: Update to 3.34.0.
* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.34.0.
Change-Id: I88f47a7143e875b60fea818bdb4d7b037345d055
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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c2a3f81a63
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gnu: r-annotationhub: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.12.0.
[propagated-inputs]: Remove r-interactivedisplaybase.
Change-Id: I849b7fcc5eea1cc48076b134fddda17bc8461973
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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5c889fbcfd
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gnu: r-annotationforge: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.46.0.
Change-Id: Ieabb5d5d3f990d961014003d47eb5dd21656ebc2
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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131109f910
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gnu: r-annotationfilter: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.28.0.
Change-Id: Ib4cad5054f1cf174ee2ecb589f8442e9dc86e5dc
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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d90bc96e17
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gnu: r-annotationdbi: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.66.0.
Change-Id: Ia103d540fc7e872fd96bffa044076c969c072319
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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cb56dc94bc
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gnu: r-annotate: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.82.0.
Change-Id: I9940d1837c62c2421513021fe12fb87e629ba0df
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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55dca2271e
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gnu: r-affxparser: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.76.0.
Change-Id: I9c412f0ef4f29d50e07f32a6944f13ba470cc6c3
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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563de39417
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gnu: r-affyio: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-affyio): Update to 1.74.0.
Change-Id: If694dbba3f447019bb822ba94ff73976b77864c3
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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2299ed5417
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gnu: r-affycoretools: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.76.0.
Change-Id: I486f8aca7a0d2a9640b3ae05ba50fdc6420fde24
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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b563dc47fd
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gnu: r-affycontam: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.62.0.
Change-Id: Ia2688e906b16b11d96925beded22d47cbb3f67c0
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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fdd6664fb1
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gnu: r-affycomp: Update to 1.80.0.
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.80.0.
Change-Id: I544133d53f46e156cd0483c27a88c56f31be4af4
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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65e26fef18
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gnu: r-affy: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-affy): Update to 1.82.0.
Change-Id: Ie17dffe76198632a8e1ea6f7a0f1c9eb68049b98
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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0949c9f244
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gnu: r-nebulosa: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-nebulosa): Update to 1.14.0.
Change-Id: I9d86fabf46fe139c6e6f210f46dafd5132c5adad
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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c322655c7d
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gnu: r-italics: Update to 2.64.0.
* gnu/packages/bioconductor.scm (r-italics): Update to 2.64.0.
Change-Id: Ibed68d0d8209db3f5a76c507a58c76389d546af2
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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a32bba3fb6
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gnu: r-isoformswitchanalyzer: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 2.4.0.
[propagated-inputs]: Add r-pwalign.
Change-Id: I1e6f6767698f2f97cfc53637987a824a6d80609d
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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b4d31f1a10
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gnu: r-iranges: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.38.0.
Change-Id: I9e1a24614dcfc179a5659b3bccdde26cb7b06dab
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2024-05-08 12:53:21 +02:00 |
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Ricardo Wurmus
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f4c03a251e
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gnu: r-infercnv: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-infercnv): Update to 1.20.0.
[inputs]: Remove python.
Change-Id: Ib8666fd27a504c824c747cc27960bde490459544
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2024-05-08 12:53:21 +02:00 |