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72348 Commits (eb11e1e180c198564942ff2b448a800de3116e34)

Author SHA1 Message Date
Leo Famulari eb11e1e180
gnu: linux-libre 4.19: Update to 4.19.169.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.169.
(linux-libre-4.19-pristine-source): Update hash.
2021-01-19 22:26:39 -05:00
Leo Famulari 69a832a592
gnu: linux-libre 5.4: Update to 5.4.91.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.91.
(linux-libre-5.4-pristine-source): Update hash.
2021-01-19 22:26:39 -05:00
Leo Famulari 1470d2dde1
gnu: linux-libre: Update to 5.10.9.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.9.
(linux-libre-5.10-pristine-source): Update hash.
2021-01-19 22:26:39 -05:00
Michael Rohleder def314d810
gnu: vlc: Update to 3.0.12.
* gnu/packages/video.scm (vlc): Update to 3.0.12.

Signed-off-by: Leo Famulari <leo@famulari.name>
2021-01-19 21:47:06 -05:00
Eric Bavier 13f5f3a251
gnu: libabigail: Update to 1.8.
* gnu/packages/elf.scm (libabigail): Update to 1.8.
2021-01-19 17:12:14 -06:00
Nicolas Goaziou 6340fe6f0c
gnu: musescore: Update to 3.6.
* gnu/packages/music.scm (musescore): Update to 3.6.
2021-01-19 23:12:51 +01:00
Nicolas Goaziou ad6c8887b4
gnu: emacs-flycheck-grammalecte: Update to 1.3.
* gnu/packages/emacs-xyz.scm (emacs-flycheck-grammalecte): Update to 1.3.
[source]: Change upstream URL.
[arguments]: Remove phase for symlinks since it is now possible to
circumvent it with configuration.  Configure accordingly.
[home-page]: Update URL.
2021-01-19 21:48:17 +01:00
Efraim Flashner ba3e25bbf2
gnu: kwayland: Enable test suite.
* gnu/packages/kde-frameworks.scm (kwayland)[arguments]: Don't skip
tests. Adjust 'check-setup phase to render QT windows offscreen.
2021-01-19 22:21:52 +02:00
Oskar Köök aa8df16bc5
gnu: erlang: Update to 23.2.1.
* gnu/packages/erlang.scm (erlang): Update to 23.2.1.
[arguments]: Add phase to patch configure script.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-01-19 21:40:03 +02:00
Oskar Köök d485ef5ce9
gnu: elixir: Update to 1.11.3.
* gnu/packages/elixir.scm (elixir): Update to 1.11.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-01-19 21:37:04 +02:00
Ludovic Courtès ff34f8a693
news: Add entry for '--with-latest'.
* etc/news.scm: Add entry.
2021-01-19 18:14:43 +01:00
Ludovic Courtès 9ab817b2a4
transformations: Add '--with-latest'.
* guix/upstream.scm (upstream-source-compiler): New procedure.
(%updaters): Set! it.
* guix/transformations.scm (transform-package-latest): New procedure.
(%transformations): Add 'with-latest'.
(%transformation-options, show-transformation-options-help/detailed):
Add '--with-latest'.
* tests/transformations.scm ("options->transformation, with-latest"):
New test.
* doc/guix.texi (Package Transformation Options): Document it.
2021-01-19 17:45:39 +01:00
Vincent Legoll 30c164e3fd
gnu: rpcbind: Update to 1.2.5.
* gnu/packages/onc-rpc.scm (rpcbind): Update to 1.2.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-19 17:45:39 +01:00
Michael Rohleder 01b92ba705
gnu: xfce4-appfinder: Update to 4.16.1.
* gnu/packages/xfce.scm (xfce4-appfinder): Update to 4.16.1.
[source]: Fix uri and use https.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-19 17:45:39 +01:00
Vincent Legoll dc5d514362
gnu: motion: Update to 4.3.2.
* gnu/packages/video.scm (motion): Update to 4.3.2.
[arguments]: In 'bootstrap' phase, adjust 'version.sh' file name.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-19 17:45:38 +01:00
Ryan Prior 94b7687e3e
gnu: esbuild: Update to 0.8.32.
* gnu/packages/web.scm (esbuild): Update to 0.8.32.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-01-19 17:45:38 +01:00
JOULAUD François 4d79f072cc
environment: Fix '--root' option with relative file name.
The path normalization of `--root` option of `guix environment` was
buggy as it appended full argument after normalized directory. This
patch fixes it.

* guix/scripts/environment.scm (register-gc-root): Fix gc-root path
normalization.
* tests/guix-environment.sh: Add test.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2021-01-19 17:45:38 +01:00
Ludovic Courtès f97ee77418
modules: Recognize #:re-export-and-replace.
* guix/modules.scm (extract-dependencies): Recognize
 #:re-export-and-replace, which was introduced in Guile 3.0.
2021-01-19 17:45:38 +01:00
Mathieu Othacehe e74baa1245
system: Rename 'disk-image' command 'image'.
* guix/scripts/system.scm (system-derivation-for-action): Rename 'disk-image'
command 'image'. Warn when using the now deprecated 'disk-image' command.
(show-help): Adapt accordingly.
(guix-system): Ditto.
* tests/guix-system.sh: Ditto.
* gnu/system/examples/bare-hurd.tmpl: Ditto.
* doc/guix.texi (Building the Installation Image,
Building the Installation Image for ARM Boards,
Invoking guix pack,
Invoking guix system): Adapt documentation.
2021-01-19 17:16:56 +01:00
Efraim Flashner 868c4dec0f
gnu: terminology: Update to 1.9.0.
* gnu/packages/enlightenment.scm (terminology): Update to 1.9.0.
[arguments]: Add configure-flag to find more binaries.
2021-01-19 18:11:50 +02:00
Joshua C. Randall cb68ae668a
doc: Fix typo.
Fixes <http://bugs.gnu.org/35004>.

* doc/guix.texi (Invoking guix package): Fix typo.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-01-19 11:57:16 +01:00
Efraim Flashner b3e39a475f
gnu: freebayes: Update source, home-page URIs.
* gnu/packages/bioinformatics.scm (freebayes)[source]: Update to new
upstream URI.
[home-page]: Same.
2021-01-19 11:48:38 +02:00
Efraim Flashner 1d92fb08cf
gnu: terminator: Adjust description.
* gnu/packages/gnome.scm (terminator)[description): Remove stray '+'.
2021-01-19 11:46:41 +02:00
Efraim Flashner 99043adf46
gnu: freebayes: Don't include vcflib sources.
* gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Remove
vcflib-source, intervaltree-source. Move vcflib ...
[inputs]: ... to here.
[arguments]: Adjust 'patch-source and 'unpack-submodule-sources for
changes in vendored code.
* gnu/packages/patches/freebayes-devendor-deps.patch: Update patch.
2021-01-19 11:41:07 +02:00
Efraim Flashner 1bbfe1789d
gnu: vcflib: Add pkg-config file.
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Add phase to
create pkg-config file.
2021-01-19 11:36:01 +02:00
Efraim Flashner d6a8148c8d
gnu: vcflib: Build a shared library.
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Add phase to
build a shared library instead of a static one.
2021-01-19 10:43:06 +02:00
Efraim Flashner 797585746b
gnu: freebayes: Extend test timeout on slower architectures.
* gnu/packages/bioinformatics.scm (freebayes)[arguments]: Use custom
'check phase  on aarch64-linux and armhf-linux to extend the test timeout.
2021-01-19 10:33:19 +02:00
Michael Rohleder 63806fedf2
gnu: xpra: Add more encoding options.
* gnu/packages/xorg.scm (xpra)[inputs]: Add libx264, x265, libvpx.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-01-19 09:54:07 +02:00
Michael Rohleder d34573f3df
gnu: xpra: Update to 4.0.6.
* gnu/packages/xorg.scm (xpra): Update to 4.0.6.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-01-19 09:54:04 +02:00
Kei Kebreau ac3c4e3247
gnu: libid3tag: Add comment justifying the 'install-pkg-config phase.
* gnu/packages/mp3.scm (libid3tag)[arguments]: Add a comment about Audacity
requiring a pkg-config file for libid3tag.
2021-01-18 18:59:48 -05:00
Kei Kebreau eb9d366702
gnu: libmad: Add comment justifying the 'install-pkg-config phase.
* gnu/packages/mp3.scm (libmad)[arguments]: Add a comment about Audacity
requiring a pkg-config file for libmad.
2021-01-18 18:59:48 -05:00
Ricardo Wurmus 559feb6661
gnu: Add guile-libyaml.
* gnu/packages/guile-xyz.scm (guile-libyaml): New variable.
2021-01-18 23:26:53 +01:00
Mădălin Ionel Patrașcu c0afd8044f
gnu: Add r-snapatac.
* gnu/packages/bioinformatics.scm (r-snapatac): New variable.
2021-01-18 23:26:53 +01:00
Mădălin Ionel Patrașcu 2d9c6542c8
gnu: mafft: Update to 7.475.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.475.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-01-18 11:57:28 +02:00
Vincent Legoll 973a1e5272
gnu: musl: Update to 1.2.2.
* gnu/packages/musl.scm (musl): Update to 1.2.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-01-18 11:54:37 +02:00
Efraim Flashner 6cb86e23a9
gnu: ruby-bio-vcf: Rename to bio-vcf.
This package is widely known in select circles specifically as 'bio-vcf'.

* gnu/packages/bioinformatics.scm (ruby-bio-vcf): Rename to bio-vcf.
2021-01-18 11:19:37 +02:00
Efraim Flashner 9b6cddd32d
gnu: Add ruby-bio-vcf.
* gnu/packages/bioinformatics.scm (ruby-bio-vcf): New variable.
2021-01-18 10:41:46 +02:00
Leo Famulari c20eee77a1
gnu: linux-libre 4.4: Update to 4.4.252.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.252.
(linux-libre-4.4-pristine-source): Update hash.
2021-01-18 02:42:21 -05:00
Leo Famulari 2c0f457968
gnu: linux-libre 4.9: Update to 4.9.252.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.252.
(linux-libre-4.9-pristine-source): Update hash.
2021-01-18 02:42:20 -05:00
Leo Famulari 83c99f3767
gnu: linux-libre 4.14: Update to 4.14.216.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.216.
(linux-libre-4.14-pristine-source): Update hash.
2021-01-18 02:42:20 -05:00
Leo Famulari 7cd85dae00
gnu: linux-libre 4.19: Update to 4.19.168.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.168.
(linux-libre-4.19-pristine-source): Update hash.
2021-01-18 02:42:20 -05:00
Leo Famulari 5a748524ee
gnu: linux-libre 5.4: Update to 5.4.90.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.90.
(linux-libre-5.4-pristine-source): Update hash.
2021-01-18 02:42:20 -05:00
Leo Famulari 4b3f5bef4b
gnu: linux-libre: Update to 5.10.8.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.8.
(linux-libre-5.10-pristine-source): Update hash.
2021-01-18 02:42:20 -05:00
Tobias Geerinckx-Rice cbc2c28ad4
gnu: xapian, python-xapian-bindings: Update to 1.4.18.
* gnu/packages/search.scm (xapian, python-xapian-bindings): Update to 1.4.18.
2021-01-18 01:34:53 +01:00
Tobias Geerinckx-Rice ca16ca5428
gnu: iptables: Update to 1.8.7.
* gnu/packages/linux.scm (iptables): Update to 1.8.7.
2021-01-18 01:34:53 +01:00
Tobias Geerinckx-Rice c65e3c9d41
gnu: nftables: Update to 0.9.8.
* gnu/packages/linux.scm (nftables): Update to 0.9.8.
2021-01-18 01:34:53 +01:00
Tobias Geerinckx-Rice e5a806a43a
gnu: libnftnl: Update to 1.1.9.
* gnu/packages/linux.scm (libnftnl): Update to 1.1.9.
2021-01-18 01:34:52 +01:00
Tobias Geerinckx-Rice a1093d73c3
gnu: ktouch: Update to 20.12.1.
* gnu/packages/education.scm (ktouch): Update to 20.12.1.
2021-01-18 01:34:52 +01:00
Kei Kebreau f5f642058a
gnu: wxmaxima: Update to 20.12.2.
* gnu/packages/maths.scm (wxmaxima): Update to 20.12.2.
[arguments]: Remove #:test-target and disable tests.  Remove 'pre-check
phase.
[native-inputs]: Remove xorg-server-for-tests.
[inputs]: Add libomp.
2021-01-17 18:07:29 -05:00
Kei Kebreau 9aa0a98ea0
gnu: gnuplot: Update to 5.4.1.
* gnu/packages/maths.scm (gnuplot): Update to 5.4.1.
[arguments]: Set GNUTERM in #:make-flags.
2021-01-17 18:07:29 -05:00