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98850 Commits (ebea18357b325dc96e68bfd7103497571b2cbd77)

Author SHA1 Message Date
Simon Tournier d635da51ce
gnu: r-lpsymphony: Update to 1.26.3.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.26.3.
2023-02-24 08:02:21 +01:00
Simon Tournier 14038b4df0
gnu: r-dnacopy: Update to 1.72.3.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.72.3.
2023-02-24 08:02:21 +01:00
Simon Tournier 2b6c03a34e
gnu: r-interactionset: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.26.1.
2023-02-24 08:02:21 +01:00
Simon Tournier 9202c56e84
gnu: r-oligo: Update to 1.62.2.
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.62.2.
2023-02-24 08:02:21 +01:00
Simon Tournier 144c07fd4a
gnu: r-variantannotation: Update to 1.44.1.
* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.44.1.
2023-02-24 08:02:21 +01:00
Simon Tournier 962278a621
gnu: r-stringdb: Update to 2.10.1.
* gnu/packages/bioconductor.scm (r-stringdb): Update to 2.10.1.
2023-02-24 08:02:21 +01:00
Simon Tournier 9682fd19bf
gnu: r-limma: Update to 3.54.1.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.54.1.
2023-02-24 08:02:21 +01:00
Simon Tournier 8fb4758b12
gnu: r-impute: Update to 1.72.3.
* gnu/packages/bioconductor.scm (r-impute): Update to 1.72.3.
2023-02-24 08:01:02 +01:00
Simon Tournier 705d024b14
gnu: r-genomicfeatures: Update to 1.50.4.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.50.4.
2023-02-24 08:01:02 +01:00
Simon Tournier 5b0984393c
gnu: r-genomeinfodb: Update to 1.34.9.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.34.9.
2023-02-24 08:01:02 +01:00
Simon Tournier 4fd6ea684a
gnu: r-genefilter: Update to 1.80.3.
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.80.3.
2023-02-24 08:01:02 +01:00
Simon Tournier b38475bef4
gnu: r-edger: Update to 3.40.2.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.40.2.
2023-02-24 08:01:02 +01:00
Simon Tournier 3ffaed5044
gnu: r-deseq2: Update to 1.38.3.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.38.3.
2023-02-24 08:01:02 +01:00
Simon Tournier d2598f57fb
gnu: r-bsgenome: Update to 1.66.3.
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.66.3.
2023-02-24 08:01:02 +01:00
Simon Tournier 3f2a917993
gnu: r-annotationforge: Update to 1.40.1.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.40.1.
2023-02-24 08:01:02 +01:00
Simon Tournier dd2c4cafdf
gnu: r-cytolib: Update to 2.10.1.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.10.1.
[propagated-inputs]: Remove r-rcpp, r-rcpparmadillo and r-rcppparallel.
2023-02-24 08:00:58 +01:00
Tobias Geerinckx-Rice af80906345
gnu: bees: Drop ‘dedupe’ slang.
* gnu/packages/file-systems.scm (bees)[synopsis, description]: Write out
‘deduplication’ in full.  Expand @acronym in description rather than
synopsis.  Drop filler words.
2023-02-19 01:00:06 +01:00
Morgan Smith 4f08551a83
gnu: bees: Update to 0.9.2.
* gnu/packages/file-systems.scm (bees): Update to 0.9.2.
[license]: Add two individual licences.
* gnu/packages/patches/bees-beesd-honor-destdir-on-installation.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2023-02-19 01:00:06 +01:00
Tobias Geerinckx-Rice 1eea158ee5
gnu: homebank: Update to 5.6.2.
* gnu/packages/finance.scm (homebank): Update to 5.6.2.
2023-02-19 01:00:02 +01:00
Tobias Geerinckx-Rice c32f9912e6
gnu: xvfb-run: Update to 21.1.7-1.
* gnu/packages/xorg.scm (xvfb-run): Update to 21.1.7-1.
2023-02-19 01:00:01 +01:00
Tobias Geerinckx-Rice e701f67246
gnu: linux-libre: Consistently provide the drop_monitor module.
This is needed by, e.g., <https://github.com/nhorman/dropwatch>.
Build it as a module everywhere for consistency.

* gnu/packages/aux-files/linux-libre/4.14-i686.conf:
Set CONFIG_NET_DROP_MONITOR=m.
* gnu/packages/aux-files/linux-libre/4.14-x86_64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/4.19-i686.conf: Likewise.
* gnu/packages/aux-files/linux-libre/4.19-x86_64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.10-arm.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.10-arm64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.10-i686.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.10-x86_64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.15-arm.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.15-arm64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.15-i686.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.15-x86_64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.4-arm.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.4-arm64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.4-i686.conf: Likewise.
* gnu/packages/aux-files/linux-libre/5.4-x86_64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/6.1-arm.conf: Likewise.
* gnu/packages/aux-files/linux-libre/6.1-arm64.conf: Likewise.
* gnu/packages/aux-files/linux-libre/6.1-i686.conf: Likewise.
* gnu/packages/aux-files/linux-libre/6.1-x86_64.conf: Likewise.

Reported by mirai in #guix.
2023-02-19 01:00:01 +01:00
Tobias Geerinckx-Rice 00d855ae3a
gnu: epson-inkjet-printer-escpr: Update to 1.7.24.
* gnu/packages/cups.scm (epson-inkjet-printer-escpr): Update to 1.7.24.
2023-02-19 01:00:01 +01:00
Tobias Geerinckx-Rice 1e6ddceb83
gnu: Use HTTPS package home pages wherever possible.
* gnu/packages/accessibility.scm (florence)[home-page]: Use HTTPS.
* gnu/packages/admin.scm (netcat, nmon)[home-page]: Likewise.
* gnu/packages/algebra.scm (mpfrcx, cm, flint, fftw, r-dtt)[home-page]:
Likewise.
* gnu/packages/apr.scm (apr, apr-util)[home-page]: Likewise.
* gnu/packages/aspell.scm (aspell-dict-it)[home-page]: Likewise.
* gnu/packages/astronomy.scm (casacore, sextractor, libnova)
(xplanet)[home-page]: Likewise.
* gnu/packages/audio.scm (libtimidity, alsa-modular-synth, azr3, tao)
(freepats, rakarrack, liblo, libshout-idjc, timidity++, libsbsms)
(libmodplug, libxmp, xmp, sox, drc, gsm, gnaural)
(streamripper)[home-page]: Likewise.
* gnu/packages/authentication.scm (pamtester)[home-page]: Likewise.
* gnu/packages/backup.scm (grsync)[home-page]: Likewise.
* gnu/packages/bioconductor.scm (r-nmf, r-edger, r-limma)
(r-plgem)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (python-biom-format, bowtie, bowtie1)
(bwa, crossmap, java-htsjdk, java-htsjdk-latest, java-picard)
(java-picard-2.10.3, kaiju, proteinortho, rsem, rseqc, seek, samtools)
(snap-aligner, subread, stringtie, r-centipede, prinseq, emboss, phylip)
(libsbml)[home-page]: Likewise.
* gnu/packages/build-tools.scm (tup)[home-page]: Likewise.
* gnu/packages/cdrom.scm (libcddb, cdrdao, cdrtools)
(cd-discid)[home-page]: Likewise.
* gnu/packages/check.scm (cunit, python-nose)
(python-pyhamcrest)[home-page]: Likewise.
* gnu/packages/chemistry.scm (gromacs)[home-page]: Likewise.
* gnu/packages/chez.scm (chez-fmt)[home-page]: Likewise.
* gnu/packages/code.scm (lcov, uncrustify, cscope)[home-page]: Likewise.
* gnu/packages/compression.scm (p7zip)[home-page]: Likewise.
* gnu/packages/cran.scm (r-emdist, r-proj4, r-zoo, r-ggalluvial)
(r-orgmassspecr, r-polychrome, r-partykit, r-rcpp, r-ff, r-emdbook)
(r-fitdistrplus, r-linprog, r-geometry, r-dtw, r-fst, r-rjags)
(r-intergraph, r-qualv, r-labelled, r-survey, r-coin, r-fmsb, r-tm)
(r-corpcor, r-rmpfr, r-spatialextremes, r-longitudinal, r-genenet)
(r-bayesm, r-seqinr, r-mpm, r-text2vec, r-rgdal, r-seewave, r-hdrcde)
(r-shapes, r-anytime, r-stm, r-d3network, r-tam, r-directlabels)
(r-spatstat-utils, r-spatstat-sparse, r-spatstat-data, r-spatstat-geom)
(r-spatstat-core, r-spatstat-linnet, r-spatstat-random, r-spatstat)
(r-rcpptoml, r-mlecens, r-seurat, r-mlearning, r-zooimage)[home-page]:
Likewise.
* gnu/packages/crates-io.scm (rust-nickel-0.11, rust-thrift-0.13)
(rust-trust-dns-https-0.20, rust-trust-dns-native-tls-0.20)
(rust-trust-dns-openssl-0.20, rust-trust-dns-proto-0.20)
(rust-trust-dns-resolver-0.20, rust-trust-dns-rustls-0.20)
(rust-uint-0.9, rust-yaml-rust-0.4)[home-page]: Likewise.
* gnu/packages/crypto.scm (libdecaf, ccrypt)[home-page]: Likewise.
* gnu/packages/curl.scm (curlpp)[home-page]: Likewise.
* gnu/packages/databases.scm (python-pylibmc, unixodbc, wiredtiger)
(libpqxx, mdbtools, virtuoso-ose, libdbi, libdbi-drivers)
(soci)[home-page]: Likewise.
* gnu/packages/debian.scm (apt-mirror)[home-page]: Likewise.
* gnu/packages/debug.scm (remake)[home-page]: Likewise.
* gnu/packages/disk.scm (sdparm, idle3-tools, duc)[home-page]: Likewise.
* gnu/packages/django.scm (python-django-haystack)[home-page]: Likewise.
* gnu/packages/djvu.scm (djvulibre, djview)[home-page]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[home-page]: Likewise.
* gnu/packages/docbook.scm (dblatex, docbook2x)[home-page]: Likewise.
* gnu/packages/documentation.scm (scrollkeeper)[home-page]: Likewise.
* gnu/packages/ebook.scm (liblinebreak)[home-page]: Likewise.
* gnu/packages/electronics.scm (xoscope)[home-page]: Likewise.
* gnu/packages/emacs-xyz.scm (emacs-bbdb, emacs-caps-lock, emacs-djvu)
(emacs-pabbrev, emacs-twittering-mode, emacs-filladapt, emacs-rudel)
(emacs-stream, emacspeak, emacs-cc-mode, emacs-eldoc, emacs-jsonrpc)
(emacs-gtk-look, emacs-xclip, emacs-slime-volleyball, emacs-minimap)
(emacs-auto-dictionary-mode, emacs-persist, emacs-shell-command+)
(emacs-map, emacs-xref, emacs-dictionary)[home-page]: Likewise.
* gnu/packages/embedded.scm (sdcc)[home-page]: Likewise.
* gnu/packages/engineering.scm (asco, libngspice, libspnav)
(openctm)[home-page]: Likewise.
* gnu/packages/erlang.scm (erlang-erlware-commons)[home-page]: Likewise.
* gnu/packages/file-systems.scm (jfsutils, curlftpfs)[home-page]:
Likewise.
* gnu/packages/finance.scm (gbonds)[home-page]: Likewise.
* gnu/packages/flashing-tools.scm (dfu-util, srecord)[home-page]:
Likewise.
* gnu/packages/fltk.scm (ntk)[home-page]: Likewise.
* gnu/packages/fonts.scm (font-terminus, font-tex-gyre)
(font-comic-neue)[home-page]: Likewise.
* gnu/packages/fontutils.scm (ttf2pt1, potrace, libspiro)[home-page]:
Likewise.
* gnu/packages/fpga.scm (icestorm, gtkwave, gtkwave)
(python-myhdl)[home-page]: Likewise.
* gnu/packages/freedesktop.scm (libatasmart)[home-page]: Likewise.
* gnu/packages/ftp.scm (weex)[home-page]: Likewise.
* gnu/packages/game-development.scm (dds, python-tmx, sfxr, quesoglc)
(eureka, plib)[home-page]: Likewise.
* gnu/packages/games.scm (abe, alex4, armagetronad, barony)
(foobillard++, golly, ltris, pipewalker, prboom-plus, trigger-rally)
(cmatrix, pinball, pioneers, tennix, chromium-bsu, freeciv, kiki)
(quakespasm, frotz, frotz-dumb-terminal, frotz-sdl, btanks)
(flare-engine, chessx, barrage, cgoban, passage)[home-page]: Likewise.
* gnu/packages/geo.scm (python-geopandas, saga)[home-page]: Likewise.
* gnu/packages/gl.scm (freeglut, gl2ps)[home-page]: Likewise.
* gnu/packages/gnome.scm (cogl, clutter-gtk, clutter-gst, bluefish)
(workrave)[home-page]: Likewise.
* gnu/packages/gnustep.scm (wmnd, wmfire, wmfire)[home-page]: Likewise.
* gnu/packages/graph.scm (mscgen)[home-page]: Likewise.
* gnu/packages/graphics.scm (assimp, alembic, ctl, agg)
(opencsg)[home-page]: Likewise.
* gnu/packages/graphviz.scm (gts)[home-page]: Likewise.
* gnu/packages/gtk.scm (gtkspell3)[home-page]: Likewise.
* gnu/packages/guile-xyz.scm (guile-irregex)[home-page]: Likewise.
* gnu/packages/haskell-apps.scm (cpphs)[home-page]: Likewise.
* gnu/packages/haskell-check.scm (ghc-hunit)[home-page]: Likewise.
* gnu/packages/haskell-web.scm (ghc-http-client-restricted)
(ghc-blaze-html, ghc-happstack-server, ghc-sourcemap)[home-page]:
Likewise.
* gnu/packages/haskell-xyz.scm (ghc-assoc, ghc-cairo, ghc-cborg)
(ghc-csv, ghc-glob, ghc-gtk2hs-buildtools, ghc-hmatrix-gsl-stats)
(ghc-intervalmap, ghc-lens-family-core, ghc-managed, ghc-mountpoints)
(ghc-network-multicast, ghc-optional-args, ghc-regex, ghc-spoon)
(ghc-transformers, ghc-turtle, ghc-utf8-light, ghc-wizards)
(ghc-template-haskell, ghc-boot-th, ghc-binary-orphans)
(ghc-postgresql-simple)[home-page]: Likewise.
* gnu/packages/hexedit.scm (ht, bvi)[home-page]: Likewise.
* gnu/packages/hunspell.scm (hunspell-dict-hu)[home-page]: Likewise.
* gnu/packages/image-processing.scm (mia)[home-page]: Likewise.
* gnu/packages/image-viewers.scm (geeqie, gpicview, luminance-hdr)
(qiv)[home-page]: Likewise.
* gnu/packages/image.scm (libuemf, devil, steghide, optipng, niftilib)
(sng, mtpaint)[home-page]: Likewise.
* gnu/packages/java-xml.scm (java-simple-xml, java-jaxp)
(java-apache-xml-commons-resolver)[home-page]: Likewise.
* gnu/packages/java.scm (java-cisd-base, java-cisd-args4j)
(java-hamcrest-core, java-jsr305, java-eclipse-osgi)
(java-eclipse-equinox-common, java-eclipse-core-jobs)
(java-eclipse-equinox-registry, java-eclipse-equinox-app)
(java-eclipse-equinox-preferences, java-eclipse-core-contenttype)
(java-eclipse-text, java-treelayout, java-aopalliance, java-jeromq)
(java-cdi-api)[home-page]: Likewise.
* gnu/packages/jemalloc.scm (jemalloc-4.5.0)[home-page]: Likewise.
* gnu/packages/julia-xyz.scm (julia-recipespipeline)[home-page]:
Likewise.
* gnu/packages/kde-internet.scm (kget)[home-page]: Likewise.
* gnu/packages/kde-systemtools.scm (dolphin-plugins)
(konsole)[home-page]: Likewise.
* gnu/packages/kodi.scm (fstrcmp)[home-page]: Likewise.
* gnu/packages/language.scm (hime, libchewing)[home-page]: Likewise.
* gnu/packages/lego.scm (nqc)[home-page]: Likewise.
* gnu/packages/lesstif.scm (lesstif)[home-page]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[home-page]: Likewise.
* gnu/packages/libdaemon.scm (libdaemon)[home-page]: Likewise.
* gnu/packages/libffi.scm (libffi)[home-page]: Likewise.
* gnu/packages/libreoffice.scm (libwpd, libwpg, libwps)[home-page]:
Likewise.
* gnu/packages/libusb.scm (libmtp, gmtp)[home-page]: Likewise.
* gnu/packages/linux.scm (e2fsprogs, extundelete, lsscsi, net-tools)
(kbd, sysfsutils, cpuid, libpfm4)[home-page]: Likewise.
* gnu/packages/lisp-check.scm (sbcl-ptester, sbcl-xlunit)[home-page]:
Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-html-encode, sbcl-py-configparser)
(sbcl-cl-utilities, sbcl-series, sbcl-uffi, sbcl-clsql, sbcl-sycamore)
(sbcl-osicat, sbcl-hu.dwim.common, sbcl-caveman, sbcl-trivial-shell)
(sbcl-trivial-benchmark, sbcl-screamer, sbcl-smug)[home-page]: Likewise.
* gnu/packages/lisp.scm (lush2)[home-page]: Likewise.
* gnu/packages/logging.scm (log4cpp)[home-page]: Likewise.
* gnu/packages/lua.scm (lua-ldoc)[home-page]: Likewise.
* gnu/packages/machine-learning.scm (mcl, openfst, rxcpp)[home-page]:
Likewise.
* gnu/packages/mail.scm (muchsync, procmail, sendmail)
(opensmtpd-filter-dkimsign, crm114)[home-page]: Likewise.
* gnu/packages/man.scm (libpipeline, man-db)[home-page]: Likewise.
* gnu/packages/maths.scm (lapack, scalapack, hdf-eos5, itpp, gmsh)
(metamath, p4est, armadillo, suitesparse, atlas, lpsolve, wcalc, why3)
(frama-c)[home-page]: Likewise.
* gnu/packages/mcrypt.scm (mcrypt, libmcrypt, libmhash)[home-page]:
Likewise.
* gnu/packages/minetest.scm (minetest-advtrains)[home-page]: Likewise.
* gnu/packages/monitoring.scm (python-whisper, python-carbon)
(hostscope)[home-page]: Likewise.
* gnu/packages/mp3.scm (id3lib, libmp3splt, mp3splt, mpg321)
(lame)[home-page]: Likewise.
* gnu/packages/multiprecision.scm (mpc)[home-page]: Likewise.
* gnu/packages/music.scm (aria-maestosa, lingot, setbfree, bristol)
(portmidi, python-pyportmidi, zynaddsubfx, yoshimi, aj-snapshot)
(schismtracker, midicsv, midicsv, qmidiarp, qmidiroute, dssi, tap-lv2)
(shiru-lv2)[home-page]: Likewise.
* gnu/packages/ncurses.scm (stfl)[home-page]: Likewise.
* gnu/packages/networking.scm (lksctp-tools, mbuffer, ifstatus, bird)
(tunctl, traceroute)[home-page]: Likewise.
* gnu/packages/node-xyz.scm (node-mersenne)[home-page]: Likewise.
* gnu/packages/ntp.scm (openntpd)[home-page]: Likewise.
* gnu/packages/ocaml.scm (opam, hevea, ocaml-menhir, ocaml-piqilib)
(ocaml-graph, cubicle)[home-page]: Likewise.
* gnu/packages/opencl.scm (python-pyopencl)[home-page]: Likewise.
* gnu/packages/package-management.scm (xstow, modules)[home-page]:
Likewise.
* gnu/packages/parallel.scm (xjobs)[home-page]: Likewise.
* gnu/packages/pdf.scm (podofo, qpdf, xournal, impressive)[home-page]:
Likewise.
* gnu/packages/perl.scm (perl-math-vecstat, perltidy)[home-page]:
Likewise.
* gnu/packages/photo.scm (libpano13, enblend-enfuse, hugin)[home-page]:
Likewise.
* gnu/packages/plan9.scm (drawterm)[home-page]: Likewise.
* gnu/packages/plotutils.scm (guile-charting, ploticus)[home-page]:
Likewise.
* gnu/packages/popt.scm (argtable, popt)[home-page]: Likewise.
* gnu/packages/profiling.scm (otf2)[home-page]: Likewise.
* gnu/packages/pulseaudio.scm (pulseaudio)[home-page]: Likewise.
* gnu/packages/python-check.scm (python-mypy)[home-page]: Likewise.
* gnu/packages/python-web.scm (python-cssutils)
(python-translationstring)[home-page]: Likewise.
* gnu/packages/python-xyz.scm (python-diskcache, python-doxyqml)
(python-docutils, python-pexpect, python-importlib-resources)
(python-simplegeneric, python-urwid, python-xlrd, python-xlwt)
(python-pyasn1, python-pythondialog, python-tftpy, python-random2)
(python-arcp, python-pyopengl, python-sortedcollections)
(python-sortedcontainers, python-yapsy, python-pydispatcher)
(python-posix-ipc)[home-page]: Likewise.
* gnu/packages/qt.scm (qwt, libqglviewer, signond)[home-page]: Likewise.
* gnu/packages/radio.scm (unixcw, gnuais)[home-page]: Likewise.
* gnu/packages/raspberry-pi.scm (bcm2835)[home-page]: Likewise.
* gnu/packages/rdf.scm (clucene, rasqal, redland)[home-page]: Likewise.
* gnu/packages/regex.scm (tre)[home-page]: Likewise.
* gnu/packages/rsync.scm (librsync)[home-page]: Likewise.
* gnu/packages/ruby.scm (ruby-packnga, ruby-nokogiri, ruby-oj, ruby-ox)
(ruby-sinatra, ruby-citrus, ruby-cbor, ruby-roda)[home-page]: Likewise.
* gnu/packages/scheme.scm (scheme48, tinyscheme)[home-page]: Likewise.
* gnu/packages/screen.scm (dtach)[home-page]: Likewise.
* gnu/packages/scsi.scm (sg3-utils)[home-page]: Likewise.
* gnu/packages/sdl.scm (libmikmod, sdl-pango)[home-page]: Likewise.
* gnu/packages/shellutils.scm (hstr, rig)[home-page]: Likewise.
* gnu/packages/simulation.scm (python-dolfin-adjoint)[home-page]:
Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[home-page]: Likewise.
* gnu/packages/speech.scm (espeak)[home-page]: Likewise.
* gnu/packages/stalonetray.scm (stalonetray)[home-page]: Likewise.
* gnu/packages/statistics.scm (jags, r-mass, r-class, r-lattice)
(r-matrix, r-nnet, r-spatial, r-bit, r-bit64, r-digest, r-xtable)
(python-statsmodels, r-ade4, r-latticeextra, r-rcurl, r-xml, r-mvtnorm)
(r-robustbase, r-minqa, r-fdrtool, java-jdistlib, xlispstat)[home-page]:
Likewise.
* gnu/packages/swig.scm (swig)[home-page]: Likewise.
* gnu/packages/task-management.scm (wtime)[home-page]: Likewise.
* gnu/packages/tcl.scm (itcl, tclxml, tclx)[home-page]: Likewise.
* gnu/packages/terminals.scm (libtermkey, mlterm, libvterm)
(libvterm)[home-page]: Likewise.
* gnu/packages/tex.scm (texlive-lm, texlive-lm-math, texlive-cs)
(texlive-csplain, biber, texmaker)[home-page]: Likewise.
* gnu/packages/text-editors.scm (joe)[home-page]: Likewise.
* gnu/packages/textutils.scm (drm-tools, docx2txt)[home-page]: Likewise.
* gnu/packages/tv.scm (tvtime)[home-page]: Likewise.
* gnu/packages/unicode.scm (libunibreak)[home-page]: Likewise.
* gnu/packages/upnp.scm (libupnp)[home-page]: Likewise.
* gnu/packages/version-control.scm (cvs)[home-page]: Likewise.
* gnu/packages/video.scm (transcode, libquicktime, mjpegtools, aalib)
(liba52, libmpeg2, x265, libdv, dvdauthor, aegisub, pitivi, gavl)
(dvdbackup, guvcview, video-contact-sheet)[home-page]: Likewise.
* gnu/packages/virtualization.scm (bochs)[home-page]: Likewise.
* gnu/packages/w3m.scm (w3m)[home-page]: Likewise.
* gnu/packages/web.scm (qjson, libquvi-scripts, libquvi, quvi)
(tidy-html, htmlcxx)[home-page]: Likewise.
* gnu/packages/wm.scm (evilwm, menumaker)[home-page]: Likewise.
* gnu/packages/wv.scm (wv)[home-page]: Likewise.
* gnu/packages/wxwidgets.scm (wxsvg)[home-page]: Likewise.
* gnu/packages/xdisorg.scm (mtdev, xsel)[home-page]: Likewise.
* gnu/packages/xfig.scm (xfig, transfig)[home-page]: Likewise.
* gnu/packages/xml.scm (openjade, python-pyxb, xmlstarlet, xmlrpc-c)
(opensp)[home-page]: Likewise.
* gnu/packages/xorg.scm (xf86-video-qxl)[home-page]: Likewise.
2023-02-19 01:00:01 +01:00
Vivien Kraus 3809aa01a1
gnu: gnulib: Allow only one directory name in GNULIB_SRCDIR.
* gnu/packages/build-tools.scm (gnulib-checkout) [search-path-specification
GNULIB_SRCDIR]: Set separator to #f.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-02-23 16:31:37 +01:00
Yovan Naumovski 84c9a94b45
gnu: Add aspell-dict-bg.
* gnu/packages/aspell.scm (aspell-dict-bg): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-02-23 16:31:37 +01:00
Andy Tai 437e858e6c
gnu: lightning: Update to 2.2.1
* gnu/packages/assembly.scm (lightning): Update to 2.2.1

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-02-23 16:31:37 +01:00
Ludovic Courtès 35e64a8793
services: hosts: Do not export '%host'.
This was not meant to be exported.

* gnu/services/base.scm (%host): Do not export.
* doc/guix.texi (Base Services): Remove mention.
2023-02-23 16:31:36 +01:00
Bruno Victal c742615b76
system: Do not export local-host-entries.
Unlike the deprecated 'local-host-aliases', there's no use for
local-host-entries since it's used to set the default value for
hosts-service-type. Given that this service-type is expected to be
extended, one presumes that when they explicitly override the service
default value they do not have much interest in the 'local-host-entries'
procedure.

* gnu/system.scm: Do not export local-host-entries.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-02-23 16:31:36 +01:00
Ludovic Courtès f45fc72c28
gnu: openmpi: Use gexps.
* gnu/packages/mpi.scm (openmpi)[arguments]: Use gexps.
2023-02-23 16:31:36 +01:00
Ludovic Courtès b8d3b9d14b
gnu: psm2: Use gexps.
* gnu/packages/linux.scm (psm2)[arguments]: Use gexps.
2023-02-23 16:31:36 +01:00
Ludovic Courtès 96c335574d
gnu: ibutils: Fix compilation.
* gnu/packages/fabric-management.scm (ibutils)[arguments]: Add CFLAGS
to #:configure-flags.
2023-02-23 16:31:35 +01:00
Ludovic Courtès f30946ce13
gnu: ibutils: Use gexps.
* gnu/packages/fabric-management.scm (ibutils)[arguments]: Use gexps.
2023-02-23 16:31:35 +01:00
Ludovic Courtès 73c738bc9e
gnu: infiniband-diags: Use gexps.
* gnu/packages/fabric-management.scm (infiniband-diags)[arguments]: Use
gexps.  Replace reference to '%outputs' with references to #:outputs.
2023-02-23 16:31:35 +01:00
Ludovic Courtès 9b3cc02acb
gnu: ucx: Use gexps.
* gnu/packages/fabric-management.scm (ucx): Use gexps.
2023-02-23 16:31:35 +01:00
Ludovic Courtès b126eae021
gnu: ucx: Mark POWER9 as supported.
* gnu/packages/fabric-management.scm (ucx)[supported-systems]: Add
"powerpc64le-linux".
2023-02-23 16:31:35 +01:00
Nicolas Goaziou 92984eb93f
Revert "gnu: texlive-latex-fancyvrb: Add needed propagated-inputs."
This reverts commit 7a01586afe, which causes too
many rebuilds.
2023-02-23 16:20:12 +01:00
Vagrant Cascadian 8b654bf159
gnu: Add staticsite.
* gnu/packages/python-xyz.scm (staticsite): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:43 +01:00
Simon Streit be1d2fb2f7
gnu: Add x11-ssh-askpass.
* gnu/packages/ssh.scm (x11-ssh-askpass): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:43 +01:00
Simon Streit a694ef4802
gnu: mpdris2: Remove input labels and add inputs.
* gnu/packages/mpd.scm (mpdris2)[arguments]: Use G-expressions.  Remove
trailing #T from phase.
[inputs]: Remove labels.  Add BASH-MINIMAL and
PYTHON-MUTAGEN.
[native-inputs]: Remove labels.
[description]: Use complete sentence.
2023-02-23 15:25:43 +01:00
conses 415db66877
gnu: Add emacs-ob-go.
* gnu/packages/emacs-xyz.scm (emacs-ob-go): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:42 +01:00
conses 0dd6b56da5
gnu: Add emacs-org-recur.
* gnu/packages/emacs-xyz.scm (emacs-org-recur): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:42 +01:00
conses f629053a84
gnu: Add emacs-calc-currency.
* gnu/packages/emacs-xyz.scm (emacs-calc-currency): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:42 +01:00
Demis Balbach 8596f4d3b4
gnu: Add emacs-jsdoc.
* gnu/packages/emacs-xyz.scm (emacs-jsdoc): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:41 +01:00
Morgan Smith adc0e3b485
gnu: Add texlive-minted.
* gnu/packages/tex.scm (texlive-minted): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:41 +01:00
Morgan Smith 08e46c3001
gnu: Add texlive-fvextra.
* gnu/packages/tex.scm (texlive-fvextra): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:40 +01:00
Morgan Smith 7a01586afe
gnu: texlive-latex-fancyvrb: Add needed propagated-inputs.
* gnu/packages/tex.scm (texlive-latex-fancyvrb)[propagated-inputs]: Add
TEXLIVE-LATEX-UPQUOTE.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:40 +01:00
Morgan Smith 1bcf02465c
gnu: texlive-mdframed: Add needed propagated-inputs.
* gnu/packages/tex.scm (texlive-mdframed)[propagated-inputs]: Add
texlive-latex-needspace, and texlive-zref.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:40 +01:00
Morgan Smith fafa3653fd
gnu: texlive-latex-ifplatform: Add needed propagated-inputs.
* gnu/packages/tex.scm (texlive-latex-ifplatform)[propagated-inputs]: Add
texlive-catchfile.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:40 +01:00
Morgan Smith d53e46cabf
gnu: Add texlive-catchfile.
* gnu/packages/tex.scm (texlive-catchfile): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-23 15:25:39 +01:00
Nicolas Goaziou 83108a60e7
gnu: emacs-modus-themes: Update to 4.1.0.
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 4.1.0.
2023-02-23 15:25:39 +01:00
Nicolas Goaziou f6ff45f21f
gnu: emacs-xref: Update to 1.6.2.
* gnu/packages/emacs-xyz.scm (emacs-xref): Update to 1.6.2.
2023-02-23 15:25:38 +01:00
Nicolas Goaziou deb902ec2f
gnu: emacs-posframe: Update to 1.4.0.
* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.4.0.
2023-02-23 15:25:38 +01:00
Leo Famulari 31735e0ccf
gnu: linux-libre 4.14: Update to 4.14.306.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.306.
(linux-libre-4.14-pristine-source): Update hash.
2023-02-22 18:18:50 -05:00
Leo Famulari d6e718a66f
gnu: linux-libre 4.19: Update to 4.19.273.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.273.
(linux-libre-4.19-pristine-source): Update hash.
2023-02-22 18:18:50 -05:00
Leo Famulari aa9ab09569
gnu: linux-libre 5.4: Update to 5.4.232.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.232.
(linux-libre-5.4-pristine-source): Update hash.
2023-02-22 18:18:49 -05:00
Leo Famulari 01a6076475
gnu: linux-libre 5.10: Update to 5.10.169.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.169.
(linux-libre-5.10-pristine-source): Update hash.
2023-02-22 18:18:49 -05:00
Leo Famulari fa55547bea
gnu: linux-libre 5.15: Update to 5.15.95.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.95.
(linux-libre-5.15-pristine-source): Update hash.
2023-02-22 18:18:49 -05:00
Leo Famulari 7557d8da98
gnu: linux-libre 6.1: Update to 6.1.13.
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.13.
(linux-libre-6.1-pristine-source): Update hash.
2023-02-22 18:18:34 -05:00
Julien Lepiller efa091f9f4
gnu: josm: Update to 18646.
* gnu/packages/geo.scm (josm): Update to 18646.
2023-02-22 21:42:03 +01:00
Peter Polidoro 9e47a50de8
gnu: kicad: Fix native-search-paths.
* gnu/packages/engineering.scm (kicad)[native-search-paths]: Update
  environment variables' names for kicad-7.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-02-22 20:59:58 +01:00
Adam Faiz 454c973197
gnu: gnunet-gtk: Use new style inputs and gexps.
* gnu/packages/gnunet.scm (gnunet-gtk)[arguments]: Use new style and gexps.
  [inputs]: Use new style.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-02-22 17:04:14 +01:00
Adam Faiz 5ef168dfb7
gnu: gnunet-gtk: Update to 0.19.0.
* gnu/packages/gnunet.scm (gnunet-gtk): Update to 0.19.0.
  [inputs]: Add libsodium.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-02-22 17:04:14 +01:00
Adam Faiz 6d53351a6d
gnu: gnunet: Update to 0.19.3.
* gnu/packages/gnunet.scm (gnunet): Update to 0.19.3.
  [source]: Add snippet.
  [inputs]: Replace gnurl by curl.
  [native-inputs]: Add python-sphinx and python-sphinx-rtd-theme.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-02-22 17:04:14 +01:00
jgart 0574aa8154
gnu: cl-jzon: Update to 1.0.0.
* gnu/packages/lisp-xyz.scm (sbcl-jzon): Update to 1.0.0.
  [source]: Use version release instead of commit.
  [inputs]: Add sbcl-float-features and sbcl-trivial-gray-streams.
  [description]: Fix typo.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2023-02-22 17:04:14 +01:00
宋文武 d9368572ab
qtwebengine-5: Enable pulseaudio.
Previously it will dlopen libpulse, then fallback to alsa.
See also <https://issues.guix.gnu.org/45280>.

* gnu/packages/qt.scm (qtwebengine-5)[arguments]: Set link_pulseaudio with gn_args.
2023-02-22 09:38:14 +08:00
Maxim Cournoyer fbbbc2088c
gnu: opendht: Update to 2.4.12.
* gnu/packages/networking.scm (opendht): Update to 2.4.12.
2023-02-21 17:06:55 -05:00
Luis Felipe b3844dc99b
gnu: Add guile-proba.
* gnu/packages/check.scm (guile-proba): New variable.

Signed-off-by: Jelle Licht <jlicht@fsfe.org>
2023-02-21 18:51:11 +01:00
Fredrik Salomonsson 4ab75f7c48
gnu: emacs-suneater-theme: Update to 2.2.0.
* gnu/packages/emacs-xyz.scm (emacs-suneater-theme): Update to 2.2.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-02-21 13:41:52 +00:00
LuHui 1461bf96e3
gnu: xfel: Update to 1.2.9.
* gnu/packages/admin.scm (xfel): Update to 1.2.9.
[arguments]: Remove udevadm command.
[synopsis,description]: Change D1 computers/devices to just devices as the
capabilities are more general.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-02-21 13:39:41 +00:00
Greg Hogan e1e74336a2
gnu: python-jupytext: Update to 1.14.4.
Fixes test failure in test_multiple_pairing in 1.14.1.

* gnu/packages/python-xyz.scm (python-jupytext): Update to 1.14.4.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-02-21 13:36:50 +00:00
Christopher Baines e42d1ae612
gnu: nar-herder: Update to 0-17.8b888de.
* gnu/packages/package-management.scm (nar-herder): Update to 0-17.8b888de.
2023-02-21 13:20:47 +00:00
Christopher Baines fbe04ea4f7
gnu: guix-build-coordinator: Update to 0-71.c29a46e.
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-71.c29a46e.
2023-02-21 13:19:06 +00:00
Christopher Baines 9577d09c59
gnu: guix-data-service: Update to 0.0.1-39.8c2f97e.
* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-39.8c2f97e.
2023-02-21 09:25:05 +00:00
Simon Tournier 73b5c955ae
gnu: python-clingo: Fix invalid G-expression input.
* gnu/packages/maths.scm (python-clingo)[arguments]: Add 'imported-modules'
and 'modules' in order to access to 'python:site-packages'.
[version]: Explicitly reuse from the package 'clingo'.
2023-02-21 06:27:07 +01:00
Maxim Cournoyer 038981e128
gnu: pjproject-jami: Update to 2.12-2.20e00fc.
This resolves a crash because of pjproject leaving too many sockets
opened ("Creating pipes for GWakeup: Too many open files").

* gnu/packages/jami.scm (pjproject-jami): Update to 2.12-2.20e00fc.
2023-02-20 17:00:11 -05:00
Maxim Cournoyer c81d2d448c
gnu: icedove: Truly prevent it from generating a new profile on every upgrade.
This fixes a regression introduced in 52cb5cf5b8 ("gnu: icedove: Update to
91.3.2") where the single quotes moved to double quotes, but the substitute*
pattern was not correctly adapted.

Fixes <https://issues.guix.gnu.org/53250>.

* gnu/packages/gnuzilla.scm (icedove-minimal)
[phases] {fix-profile-setting}: Include double qutoes in substitute* pattern
targeting the MOZ_DEDICATED_PROFILES configuration option.
2023-02-20 12:20:36 -05:00
Maxim Cournoyer 8320c0c6b6
gnu: icedove: Install the icons of the 'comm' component.
This is a follow-up commit to 47f0e022dc ("gnu: icedove: Install icons.")
which installed the icons of the 'browser' component (which are those used by
IceCat).

* gnu/packages/gnuzilla.scm (icedove-minimal) [phases]
{install-icon}: Install the icons of the 'comm' component, which is Icedove.
2023-02-20 09:22:04 -05:00
Sharlatan Hellseher e2435b60f1
gnu: Add qxlsx.
* gnu/packages/qt.scm (qxlsx): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:13:32 +01:00
Sharlatan Hellseher c08fda0716
gnu: stellarium: Update to 1.2.
* gnu/packages/astronomy.scm (stellarium): Update to 1.2.
[arguments]{tests}: Disable tests, with further review of INDI package.
[arguments]{configure-flags}: Explicitly disable Qt6 (prevent failing
build) and ShowMySky (not packed yet).
[phases]{set-offscreen-display}: Remove trail #T in lambda.
[inputs]: Remove labels and add GPSD, INDI, LIBNOVA, OPENSSL,
QTCHARTS, QTPOSITIONING, QTTRANSLATIONS, QTWEBENGINE-5, QXLSX.
[native-inputs]: Remove labels and add DOXYGEN, GRAPHVIZ, MESA,
PYTHON-WRAPPER.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:10:43 +01:00
Nicolas Goaziou c599d309c4
gnu: sshpass: Update to 1.10.
* gnu/packages/ssh.scm (sshpass): Update to 1.10.
2023-02-20 14:00:39 +01:00
Nicolas Goaziou c7aa35f388
gnu: fet: Update to 6.8.4.
* gnu/packages/education.scm (fet): Update to 6.8.4.
2023-02-20 14:00:39 +01:00
Sharlatan Hellseher ed00a514e5
gnu: python-capablerobot-usbhub: Update to 0.5.0.
* gnu/packages/libusb.scm (python-capablerobot-usbhub): Fix build and update to 0.5.0.
[source]: Use Git checkout which allows to pass build the package.
[build-system]: Use PYPROJECT-BUILD-SYSTEM.
[arguments]{tests}: Disable them as not provided.
[phases]use-poetry-core}: New phase.
[phases]{install-udev-rules}: Remove trailing #T from lambda.
[native-inputs]: Add PYTHON-POETRY-CORE.
[propagated-inputs]: Replace PYTHON-PYYAML-7 and PYTHON-PYYAML-5 by
PYTHON-CLICK and PYTHON-PYYAML.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:00:39 +01:00
Sharlatan Hellseher 5204f2edf4
gnu: python-construct: Update to 2.10.68.
* gnu/packages/python-xyz.scm (python-construct): Update to 2.10.68.
[source]: Use Git checkout over PyPI to enable tests.
[arguments]<#:phases>: Enable tests with custom phase.
[native-inputs]: Add PYTHON-PYTEST, PYTHON-PYTEST-BENCHMARK.
[propagated-inputs]: Remove PYTHON-EXTRAS. Add PYTHON-CLOUDPICKLE, PYTHON-LZ4.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:00:39 +01:00
Philippe SWARTVAGHER 274c59c6bc
gnu: python-pygraphviz: Update to 1.10.
* gnu/packages/graphviz.scm (python-pygraphviz): Update to 1.10.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:00:38 +01:00
kiasoc5 via Guix-patches via 06c5ab0821
gnu: qsynth: Update to 0.9.9.
* gnu/packages/audio.scm (qsynth): Update to 0.9.9.
[inputs]: Remove QTBASE-5 and QTX11EXTRAS; add QTBASE, QTSVG, and QTWAYLAND.
[native-inputs]: Remove QTTOOLS-5; add QTTOOLS.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:00:38 +01:00
Nicolas Goaziou 46cdc0b538
gnu: cwm: Improve package style.
* gnu/packages/wm.scm (cwm)[arguments]: Use G-expressions.
<#:phases>: Use MAKE-DESKTOP-ENTRY-FILE.
[inputs, native-inputs]: Re-order alphabetically.
[synopsis]: Use proper capitalization.
2023-02-20 14:00:38 +01:00
kiasoc5 via Guix-patches via 284229d87a
gnu: cwm: Update to 7.1.
* gnu/packages/wm.scm (cwm): Update to 7.1.
[arguments]: Remove trailing #t.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:00:37 +01:00
Rostislav Svoboda 940f2d38df
gnu: emacs-magit: Update to 3.3.0-3.2c91c08.
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.3.0-3.2c91c08.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-20 14:00:37 +01:00
Nicolas Goaziou 1551bae3de
gnu: emacs-diff-hl: Update to 1.9.2.
* gnu/packages/emacs-xyz.scm (emacs-diff-hl): Update to 1.9.2.
[description]: Use proper capitalization.
2023-02-20 14:00:37 +01:00
Nicolas Goaziou 06212e8c6a
gnu: emacs-vertico-posframe: Update to 0.7.0.
* gnu/packages/emacs-xyz.scm (emacs-vertico-posframe): Update to 0.7.0.
2023-02-20 14:00:36 +01:00
Nicolas Goaziou 79b1060279
gnu: emacs-project: Update to 0.9.8.
* gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.9.8.
2023-02-20 14:00:36 +01:00
Nicolas Goaziou 116a16aa3a
gnu: emacs-wisp-mode: Update to 1.0.10.
* gnu/packages/emacs-xyz.scm (emacs-wisp-mode): Update to 1.0.10.
2023-02-20 14:00:36 +01:00
Steve George 8322c062a9
gnu: Add rust-mockall-0.11.
* gnu/packages/crates-io.scm (rust-mockall-0.11): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-02-20 12:37:47 +02:00
Steve George 0892d54d20
gnu: Add rust-mockall-derive-0.11.
* gnu/packages/crates-io.scm (rust-mockall-derive-0.11): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-02-20 12:30:06 +02:00
Steve George 16041719bf
gnu: Add rust-mockall-double-0.3.
* gnu/packages/crates-io.scm (rust-mockall-double-0.3): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-02-20 12:23:57 +02:00
Steve George fd7c10681a
gnu: Add rust-downcast-0.11.
* gnu/packages/crates-io.scm (rust-downcast-0.11): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-02-20 12:21:12 +02:00
Efraim Flashner e8fcf1e424
gnu: qemu: Skip additional test of arm kvm features.
* gnu/packages/virtualization.scm (qemu)[arguments]: Adjust
'disable-unusable-tests phase to skip an arm test.
2023-02-20 10:52:20 +02:00
Efraim Flashner 042b92edb2
gnu: make-openbios-package: Update to 1.1-1.af97fd7.
* gnu/packages/firmware.scm (make-openbios-package): Update to
1.1-1.af97fd7.
[source]: Remove patch.
[native-inputs]: Build with gcc-10. Add fcode-utils.
* gnu/packages/patches/openbios-gcc-warnings.patch: Remove file.
* ngu/local.mk (dist_patch_DATA): Remove it.
2023-02-20 10:52:20 +02:00
Efraim Flashner 8fa5e0acec
gnu: Add fcode-utils.
* gnu/packages/firmware.scm (fcode-utils): New variable.
2023-02-20 10:52:20 +02:00
Maxim Cournoyer d318ccc363
gnu: icecat: Unbundle nss and nspr.
* gnu/packages/gnuzilla.scm (icecat-minimal) [inputs]: Add nspr-next and
nss-next.
[configure-flags]: Re-instate the "--with-system-nspr" and "--with-system-nss"
configure flags.
[phases] {remove-bundled-libraries}: Update comment.
2023-02-19 20:03:35 -05:00
Maxim Cournoyer 25f9d4c4c2
gnu: icecat: Remove gtk+-2 input.
* gnu/packages/gnuzilla.scm (icecat-minimal) [inputs]: Remove gtk+-2.
2023-02-19 20:03:35 -05:00
Maxim Cournoyer 74a5634ad8
gnu: icedove: Use the locale of the system.
* gnu/packages/gnuzilla.scm (icedove-source): Set the intl.locale.requested
option to the empty string.
2023-02-19 20:03:35 -05:00
Maxim Cournoyer acf7d01fc3
gnu: Add language packs to icecat and icedove.
Fixes <https://issues.guix.gnu.org/32026>.

* gnu/packages/gnuzilla.scm (icecat): Rename to...
(icecat-minimal): ... this.
(icedove: Rename to...
(icedove-minimal): ... this.
(make-mozilla-with-l10n): New procedure.
(icecat, icedove): New variables.
2023-02-19 20:03:34 -05:00
Maxim Cournoyer 6375e2e39c
gnu: icedove: Automatically load system-provided extensions.
* gnu/packages/gnuzilla.scm
(icedove-source): Set the extensions.autoDisableScopes preference value to 3.
(icedove-minimal) [phases]: Add the --allow-addon-sideload and
--with-unsigned-addon-scopes=app,system ac options to the configure phase.
2023-02-19 20:03:34 -05:00
Maxim Cournoyer efd9f326ae
gnu: Add icecat-l10n and icedove-l10n.
* gnu/packages/gnuzilla.scm (%icecat-locales, %icedove-locales): New variable.
(make-l10n-package): New procedure.
(icecat-l10n, icedove-l10n): New variables.
2023-02-19 20:03:34 -05:00
Maxim Cournoyer d3fcbefad1
gnu: icecat-source: Update gnuzilla to f23f8b609.
* gnu/packages/gnuzilla.scm (icecat-source): Update gnuzilla to f23f8b609.
2023-02-19 20:03:34 -05:00
Maxim Cournoyer 6d4a78356f
gnu: Define %icecat-base-version at the top level.
* gnu/packages/gnuzilla.scm (%icecat-base-version): New variable.
(%icecat-version): Define in terms of %icecat-base-version.
(icecat-source): Adjust to use the above newly introduced variables.
2023-02-19 20:03:34 -05:00
Maxim Cournoyer 456e98ad6f
gnu: icedove: Compute a self-contained source.
This refactoring work is to prepare for adding a icedove-l10n package, which
will reuse that source.

* gnu/packages/gnuzilla.scm (comm-source->locales+changset): New procedure.
(thunderbird-source): Rename to...
(thunderbird-comm-source): ... here.
(icedove-source): New variable.
(icedove) [source]: Use it.
[phases]: Remove the prepare-thunderbird-sources and rename-to-icedove phases.
2023-02-19 20:03:33 -05:00
Maxim Cournoyer f4a932cbd7
gnu: Add a 'update-mozilla-locales' helper for maintenance.
* gnu/packages/gnuzilla.scm (update-mozilla-locales): New procedure.
2023-02-19 20:03:33 -05:00
Maxim Cournoyer 636b771536
gnu: hplip-next: Simplify the fix-more-hard-coded-file-names phase.
* gnu/packages/cups.scm (hplip-next) [phases]: Only substitute python files in
the fix-more-hard-coded-file-names phase.  This greatly reduce the time taken
by the phase (from 21 s to 0.4 s) on my system, and is functionally
equivalent.
2023-02-19 10:35:45 -05:00
Andy Tai 57495d0635
gnu: Add ddd.
* gnu/packages/debug.scm (ddd): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-19 11:39:02 +01:00
Jake Leporte f36de1a5ba
gnu: emacs-vterm: Include etc directory in installed files.
* gnu/packages/emacs-xyz.scm (emacs-vterm)[arguments]<#:include>: Add
"^etc/.*" to the list of regexes for installed files.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-02-19 11:38:56 +01:00
Nicolas Goaziou e6b4fb5c6a
gnu: emacs-gnuplot: Update to 0.8.1.
* gnu/packages/emacs-xyz.scm (emacs-gnuplot): Update to 0.8.1.
2023-02-19 11:38:20 +01:00
Nicolas Goaziou 14e6a5fdd8
gnu: emacs-goggles: Update to 0.3.
* gnu/packages/emacs-xyz.scm (emacs-goggles): Update to 0.3.
[description]: Use proper capitalization.
2023-02-19 11:38:20 +01:00
Nicolas Goaziou aa1caf5fad
gnu: emacs-project: Update to 0.9.7.
* gnu/packages/emacs-xyz.scm (emacs-project): Update to 0.9.7.
2023-02-19 11:38:20 +01:00
Aleksandr Vityazev 819aaca9d5
gnu: php: Drop a failed test for riscv64.
* gnu/packages/php (php): Drop a failed test for riscv64.
[source, arguments, description]: Fix formatting.
2023-02-19 10:09:16 +01:00
Julien Lepiller 01334a61c7
gnu: Use unifont by default in TTYs.
It has even better language support than LatGrkCyr-8x16 and can show
fancy progress bars.

* gnu/services/base.scm (%default-console-font): Use unifont.
2023-02-19 10:09:10 +01:00
Liliana Marie Prikler 0100ff1727
gnu: dino: Fix comment for pango-next.
Pango 1.5 is a rather old version ;)

* gnu/packages/messaging.scm (dino)[inputs]: Fix comment next to pango-next.
2023-02-19 08:39:50 +01:00
Liliana Marie Prikler 877df1765a
gnu: guile-filesystem: Update to 0.2.0.
* gnu/packages/guile-xyz.scm (guile-filesystem): Update to 0.2.0.
[source]<url>: Use “https://gitlab.com/lilyp/guile-filesystem”.
[home-page]: Likewise.
(guile2.0-filesystem): Deleted variable.
2023-02-19 08:16:47 +01:00
Hilton Chain 28cefd2e56
gnu: hyfetch: Update to 1.4.6.
* gnu/packages/patches/hyfetch-fix-generator-script-quotation-escaping.patch:
New file.
* gnu/packages/patches/hyfetch-remove-old-catchy-os-py.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/admin.scm (hyfetch)[source]: Update to 1.4.6.
Switch to git source and add patches.
[inputs]: Remove python-hypy-utils.
[arguments]<#:phases>: Remove set-HOME phase.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-02-19 08:16:47 +01:00
Liliana Marie Prikler 243eb86c6f
gnu: Add emacs-pasp-mode.
* gnu/packages/patches/emacs-pasp-mode-quote-file-names.patch: New file.
* gnu/local.mk: Register it here.
* gnu/packages/emacs-xyz.scm (emacs-pasp-mode): New variable.
2023-02-19 08:16:47 +01:00
Liliana Marie Prikler eb96e148ca
gnu: Add python-clorm.
* gnu/packages/maths.scm (python-clorm): New variable.
2023-02-19 08:16:47 +01:00
Liliana Marie Prikler 8285093cee
gnu: python-clingo: Install distribution information.
* gnu/packages/maths.scm (python-clingo)[#:phases]: Add ‘install-distinfo’.
2023-02-19 08:16:47 +01:00
Philip McGrath b5326763c7
gnu: racket: Update to 8.8.
* gnu/packages/patches/racket-backport-8.7-pkg-strip.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Delete it.
* gnu/packages/racket.scm (%racket-origin)[patches]: Likewise.
(%racket-version): Update to 8.8.
(%zuo-version): Update to 1.6.
(racket)[inputs]<algol60, cext-lib, deinprogramm, draw, drracket>
<expeditor, gui, htdp, math, pict, r5rs, redex, sasl, scribble>
<typed-racket, string-constants, syntax-color>: Update checksums.
* gnu/packages/chez.scm (chez-scheme-for-racket): Update to
9.9.9-pre-release.14.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-02-19 08:16:47 +01:00
Parnikkapore e1290c0d43
gnu: dino: Update to 0.4.0.
* gnu/packages/messaging.scm (dino): Update to 0.4.0.
[inputs]: Replace gtk+ with gtk.
Replace pango with pango-next.
Add bash-minimal and libadwaita.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-02-19 08:16:46 +01:00
Maxim Cournoyer 037c1b254a
gnu: hplip-next: Update to 3.22.10.
* gnu/packages/cups.scm (hplip-next): Update to 3.22.10.
2023-02-18 16:01:30 -05:00
Maxim Cournoyer 185e8ac8cc
gnu: Add hplip-next.
* gnu/packages/cups.scm (hplip-next): New variable.
2023-02-18 16:01:30 -05:00
Ricardo Wurmus f3329764e2
gnu: Add r-longdat.
* gnu/packages/cran.scm (r-longdat): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus 1de36ea8d7
gnu: Add r-bestnormalize.
* gnu/packages/cran.scm (r-bestnormalize): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus 411f3f1ffe
gnu: Add r-butcher.
* gnu/packages/cran.scm (r-butcher): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus 7ec692587a
gnu: Add r-lambertw.
* gnu/packages/cran.scm (r-lambertw): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus 48e5c3bd29
gnu: Add r-lamw.
* gnu/packages/cran.scm (r-lamw): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus 971778f20b
gnu: Add r-effsize.
* gnu/packages/cran.scm (r-effsize): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus 206195d4e2
gnu: Add r-filesstrings.
* gnu/packages/cran.scm (r-filesstrings): New variable.
2023-02-18 21:11:56 +01:00
Ricardo Wurmus eb4b61c7b2
gnu: Add r-strex.
* gnu/packages/cran.scm (r-strex): New variable.
2023-02-18 21:11:51 +01:00
Maxim Cournoyer 9f21ca83a8
gnu: libreoffice: Fix password encryption issue.
Fixes <https://issues.guix.gnu.org/59292>.

* gnu/packages/libreoffice.scm (libreoffice) [phases]: Add a
augment-LD_LIBRARY_PATH phase.
2023-02-18 14:47:19 -05:00
Maxim Cournoyer c7e3617cf2
gnu: libreoffice: Enable logging system.
* gnu/packages/libreoffice.scm (libreoffice)
[configure-flags]: Add --enable-sal-log.
2023-02-18 14:47:19 -05:00
Maxim Cournoyer 0d5286b8a6
gnu: xmlsec: Update to 1.2.37.
* gnu/packages/xml.scm (xmlsec): Update to 1.2.37.
2023-02-18 14:47:19 -05:00
Maxim Cournoyer f1234c7569
gnu: python-pygit2: Update to 1.11.1.
* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.11.1.
[build-system]: Use pyproject-build-system.
[arguments]: Delete field.
[propagated-inputs]: Remove python-cached-property.
2023-02-18 14:47:19 -05:00
Maxim Cournoyer 1b78b94f06
gnu: audacity: Update to 3.2.4.
* gnu/packages/audio.scm (audacity): Update to 3.2.4.
2023-02-18 14:47:18 -05:00
Ricardo Wurmus 0ba69c1ee2
gnu: r-naniar: Update to 1.0.0.
* gnu/packages/statistics.scm (r-naniar): Update to 1.0.0.
[propagated-inputs]: Add r-cli and r-vctrs.
2023-02-18 19:56:49 +01:00
Ricardo Wurmus 7eefff7ace
gnu: r-forcats: Update to 1.0.0.
* gnu/packages/statistics.scm (r-forcats): Update to 1.0.0.
[propagated-inputs]: Remove r-ellipsis and r-withr.
2023-02-18 19:56:49 +01:00
Ricardo Wurmus fd4ed5cb74
gnu: r-lubridate: Update to 1.9.1.
* gnu/packages/statistics.scm (r-lubridate): Update to 1.9.1.
2023-02-18 19:56:49 +01:00
Ricardo Wurmus 9da0a02eac
gnu: r-pbkrtest: Update to 0.5.2.
* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.5.2.
[propagated-inputs]: Remove r-magrittr.
2023-02-18 19:56:49 +01:00
Ricardo Wurmus d9a45f736b
gnu: r-pbapply: Update to 1.7-0.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.7-0.
2023-02-18 19:56:48 +01:00
Ricardo Wurmus 86ec570b45
gnu: r-sourcetools: Update to 0.1.7-1.
* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.7-1.
2023-02-18 19:56:48 +01:00
Ricardo Wurmus 9ec3a27132
gnu: r-biased-urn: Update to 2.0.9.
* gnu/packages/statistics.scm (r-biased-urn): Update to 2.0.9.
2023-02-18 19:56:48 +01:00
Ricardo Wurmus 84469cdfd3
gnu: r-purrr: Update to 1.0.1.
* gnu/packages/statistics.scm (r-purrr): Update to 1.0.1.
2023-02-18 19:56:48 +01:00
Ricardo Wurmus b22011d2f4
gnu: r-tidyr: Update to 1.3.0.
* gnu/packages/statistics.scm (r-tidyr): Update to 1.3.0.
[propagated-inputs]: Remove r-ellipsis; add r-cli and r-stringr.
2023-02-18 19:56:48 +01:00
Ricardo Wurmus a6df23d6b9
gnu: r-e1071: Update to 1.7-13.
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-13.
2023-02-18 19:56:48 +01:00