me
/
guix
Archived
1
0
Fork 0
Code
98,627 Commits
1 Branch
0 Tags
410 MiB
Commit Graph

2801 Commits (ec23d7caa871471ad9425a21b34e1f9692a524d4)

Author SHA1 Message Date
Ricardo Wurmus 5ec7143f69
gnu: r-tcgabiolinks: Update to 2.24.1. 
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.24.1.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus a4f03b0a55
gnu: r-biscuiteer: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.10.0.
[propagated-inputs]: Add r-iranges.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus 6f31f4618a
gnu: r-omnipathr: Update to 3.4.0. 
* gnu/packages/bioconductor.scm (r-omnipathr): Update to 3.4.0.
[propagated-inputs]: Add r-withr.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus b1c215755a
gnu: r-dmrseq: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.16.0.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus 4ab8327ba4
gnu: r-bsseq: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.32.0.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus 397bdc4329
gnu: r-biotmle: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.20.0.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus 4b3f9a16f2
gnu: r-biotip: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.10.0.
[propagated-inputs]: Remove r-hmisc; add r-scran.
 2022-05-28 23:19:45 +02:00
Ricardo Wurmus e8e3d333f0
gnu: r-bioqc: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.24.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus dba6a33e3d
gnu: r-bionetstat: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.16.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus 8fe9bcf0a4
gnu: r-bionet: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.56.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus f5262fa4ed
gnu: r-bionero: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.4.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus 3391ff6ddb
gnu: r-biomvrcns: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.36.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus 7fe83026b7
gnu: r-biomvcclass: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.64.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus a3a8109fe8
gnu: r-mvcclass: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.70.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus eb18527e5f
gnu: r-biomformat: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.24.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus 12ee563b41
gnu: r-biodb: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.4.0.
 2022-05-28 23:19:44 +02:00
Ricardo Wurmus 259c003f02
gnu: r-biocdockermanager: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.8.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 6766fbb003
gnu: r-biocthis: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.6.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus b007802e4b
gnu: r-basilisk: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.8.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 90e56ba6e3
gnu: r-basilisk-utils: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-basilisk-utils): Update to 1.8.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 5d2c07021c
gnu: r-dir-expiry: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-dir-expiry): Update to 1.4.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 3c65a7d577
gnu: r-genetclassifier: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.36.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus c4f8b5759a
gnu: r-minet: Update to 3.54.0. 
* gnu/packages/bioconductor.scm (r-minet): Update to 3.54.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 395f152b92
gnu: r-biobtreer: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.8.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 24c13f9d64
gnu: r-bgeedb: Update to 2.22.0. 
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.22.0.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 00025cdd23
gnu: r-bgeecall: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.12.1.
 2022-05-28 23:19:43 +02:00
Ricardo Wurmus 460680ef90
gnu: r-beclear: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-beclear): Update to 2.12.0.
[propagated-inputs]: Remove r-outliers; add r-dixontest.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus 64c3498d9f
gnu: r-megadepth: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-megadepth): Update to 1.6.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus c2a8c4c248
gnu: r-ballgown: Update to 2.28.0. 
* gnu/packages/bioconductor.scm (r-ballgown): Update to 2.28.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus d57d65a628
gnu: r-sushi: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.34.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus 8467426bba
gnu: r-guitar: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.12.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus 80f63620c5
gnu: r-chromstar: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.22.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus 93b59aca4c
gnu: r-snpstats: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.46.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus c784304f9b
gnu: r-pathview: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.36.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus c8f930d575
gnu: r-ldblock: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.26.0.
 2022-05-28 23:19:42 +02:00
Ricardo Wurmus 564024c01f
gnu: r-kegggraph: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.56.0.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus ee71b376ec
gnu: r-gwascat: Update to 2.28.1. 
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.28.1.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus b6f77fdc87
gnu: r-gviz: Update to 1.40.1. 
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.40.1.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus 97ea85bfcf
gnu: r-ggbio: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.44.0.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus 534743333e
gnu: r-erma: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-erma): Update to 1.12.0.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus 1b75b53a0e
gnu: r-catalyst: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.20.1.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus e4a8e6dab4
gnu: r-msmstests: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.34.0.
 2022-05-28 23:19:41 +02:00
Ricardo Wurmus d99da8bb1c
gnu: r-msmseda: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.34.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus f185bf805c
gnu: r-biocio: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.6.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus d34a40c4c0
gnu: r-msfeatures: Update to 1.4.0. 
* gnu/packages/bioconductor.scm (r-msfeatures): Update to 1.4.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus ec7849c360
gnu: r-mscoreutils: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.8.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus 9381702bbc
gnu: r-delayedmatrixstats: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.18.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus eca29a788b
gnu: r-sparsematrixstats: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.8.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus 5f04cf7bdb
gnu: r-scran: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-scran): Update to 1.24.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus 9631f2190a
gnu: r-scater: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-scater): Update to 1.24.0.
[propagated-inputs]: Add r-rcppml.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus a8fbcbdb7a
gnu: r-scuttle: Update to 1.6.2. 
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.6.2.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus 816a1ba4dc
gnu: r-singler: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-singler): Update to 1.10.0.
 2022-05-28 23:19:40 +02:00
Ricardo Wurmus decd8480f6
gnu: r-singlecellexperiment: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.18.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus d9d9f78391
gnu: r-chromvar: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.18.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus 3ef47df3b6
gnu: r-motifmatchr: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.18.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus e213375069
gnu: r-maftools: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-maftools): Update to 2.12.0.
[propagated-inputs]: Add r-dnacopy.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus 7c9793b3e8
gnu: r-tfbstools: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.34.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus bde757d11d
gnu: r-cner: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-cner): Update to 1.32.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus 18fd5759c7
gnu: r-beachmat: Update to 2.12.0. 
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.12.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus 3db60a25a7
gnu: r-rhdf5lib: Update to 1.18.2. 
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.18.2.
[source]: Adjust snippet.
[arguments]: Update build phase 'do-not-use-bundled-hdf5.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus 59519a14de
gnu: r-hdf5array: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.0.
 2022-05-28 23:19:39 +02:00
Ricardo Wurmus 0b0bce3556
gnu: r-hitc: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.40.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 8b7e1da3b6
gnu: r-fithic: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.22.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 3c57f6d2a0
gnu: r-rgraphviz: Update to 2.40.0. 
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.40.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus c8e364b609
gnu: r-s4vectors: Update to 0.34.0. 
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.34.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 16419c4639
gnu: r-preprocesscore: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.58.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 0a9838b17d
gnu: r-icens: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-icens): Update to 1.68.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 3e7b5a45e4
gnu: r-m3c: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.18.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus dd33e8b062
gnu: r-rgreat: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.28.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 0f1295e9e9
gnu: r-pcatools: Update to 2.8.0. 
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.8.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus 9f3d204c3a
gnu: r-biodist: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.68.0.
 2022-05-28 23:19:38 +02:00
Ricardo Wurmus a56e8ec8fb
gnu: r-biocworkflowtools: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.22.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus 22300462dd
gnu: r-biocset: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.10.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus d5875494dd
gnu: r-biocpkgtools: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.14.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus b86b657862
gnu: r-biocor: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.20.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus e833302c58
gnu: r-bioconcotk: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.16.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus 4028c2b3b5
gnu: r-multiassayexperiment: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.22.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus c3733497e0
gnu: r-grohmm: Update to 1.30.1. 
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.30.1.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus a2756089ef
gnu: r-experimenthub: Update to 2.4.0. 
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.4.0.
 2022-05-28 23:19:37 +02:00
Ricardo Wurmus ad6185a57c
gnu: r-biocviews: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.64.0.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 52a79b24b6
gnu: r-biocstyle: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.24.0.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus d377dd0e2b
gnu: r-biocgraph: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.58.0.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 98074b0553
gnu: r-bioccheck: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-bioccheck): Update to 1.32.0.
[propagated-inputs]: Remove r-optparse.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 89c5079007
gnu: r-ebarrays: Update to 2.60.0. 
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.60.0.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 449b0f0920
gnu: r-reactomepa: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.40.0.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 8f240ba849
gnu: r-graphite: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.42.0.
[propagated-inputs]: Remove r-checkmate; add r-rlang.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 63726dee63
gnu: r-biobroom: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.28.0.
 2022-05-28 23:19:36 +02:00
Ricardo Wurmus 4bb7bb8db3
gnu: r-bioassayr: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.34.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 3d99b6af60
gnu: r-fmcsr: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-fmcsr): Update to 1.38.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 985723a862
gnu: r-chemminer: Update to 3.48.0. 
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.48.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus a2e334d20c
gnu: r-bigpint: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.12.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus e273f1ab82
gnu: r-biggr: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.32.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus a13a4d1e8f
gnu: r-hyperdraw: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.48.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 631c408da7
gnu: r-hypergraph: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.68.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 39bd70c43c
gnu: r-rsbml: Update to 2.54.0. 
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.54.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 5ab4747f77
gnu: r-bifet: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.16.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 0e4dc0e9bf
gnu: r-bicare: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.54.0.
 2022-05-28 23:19:35 +02:00
Ricardo Wurmus 3a938a5813
gnu: r-bhc: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.48.0.
 2022-05-28 23:19:34 +02:00
Ricardo Wurmus 8c4e6cfb29
gnu: r-bgx: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.62.0.
 2022-05-28 23:19:34 +02:00
Ricardo Wurmus c988069a9d
gnu: r-bgmix: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.56.0.
 2022-05-28 23:19:34 +02:00