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Author SHA1 Message Date
Tobias Geerinckx-Rice f561aca530
gnu: mcelog: Update to 180.
* gnu/packages/linux.scm (mcelog): Update to 180.
[native-inputs]: Add python-wrapper.
2022-01-07 05:57:52 +01:00
Tobias Geerinckx-Rice 0af2788d21
gnu: upower: Update to 0.99.13.
* gnu/packages/gnome.scm (upower): Update to 0.99.13.
[arguments]: Don't explicitly return #t from phases.
2022-01-07 05:57:52 +01:00
Tobias Geerinckx-Rice 386eeb04fa
gnu: youtube-dl: Update to 2021.12.17.
* gnu/packages/video.scm (youtube-dl): Update to 2021.12.17.
[source, arguments]: Don't explicitly return #t from snippet or phases.
2022-01-07 05:57:52 +01:00
Tobias Geerinckx-Rice 046322189b
gnu: Add stress-ng.
* gnu/packages/admin.scm (stress-ng): New public variable.
2022-01-07 05:57:52 +01:00
Chris Marusich e3e10fdda1
gnu: guix: Update to 1.3.0-19.a9f2cc8.
* gnu/packages/package-management.scm (guix): Update to 1.3.0-19.a9f2cc8.
2022-01-06 19:14:35 -08:00
Chris Marusich a9f2cc84bc
gnu: guix: Update to 1.3.0-18.79260c8.
* gnu/packages/package-management.scm (guix): Update to 1.3.0-18.79260c8.
2022-01-06 19:11:13 -08:00
Chris Marusich 79260c8695
services: Consistently use SDDM rather than GDM on non-x86_64.
This is a follow-up to 49599fab56.

Fixes: <https://issues.guix.gnu.org/52908>.

* gnu/services/xorg.scm (set-xorg-configuration)[login-manager-service-type]:
When the current system or target system begins with the string "x86_64", use
gdm-service-type as before; otherwise, use sddm-service-type.
* gnu/system/examples/vm-image.tmpl (services): Add sddm-service-type to the
list of service types to remove.
2022-01-06 18:54:59 -08:00
Tobias Geerinckx-Rice c4240dfdb4
gnu: simple-scan: Update to 40.7.
* gnu/packages/gnome.scm (simple-scan): Update to 40.7.
2022-01-07 02:48:01 +01:00
Tobias Geerinckx-Rice be6db7e5e5
gnu: simple-scan: Remove input labels.
* gnu/packages/gnome.scm (simple-scan)[native-inputs, inputs]:
Remove input labels.
2022-01-07 02:48:01 +01:00
Tobias Geerinckx-Rice 3c43f1490b
gnu: fheroes2: Move source field.
* gnu/packages/games.scm (fheroes2)[source]: Move where expected.
2022-01-07 02:42:18 +01:00
Tobias Geerinckx-Rice e7aee9fe8a
gnu: fheroes2: Update to 0.9.11.
* gnu/packages/games.scm (fheroes2): Update to 0.9.11.
2022-01-07 02:42:18 +01:00
Tobias Geerinckx-Rice 94fbbf0d26
gnu: fheroes2: Remove input labels.
* gnu/packages/games.scm (fheroes2)[native-inputs, inputs]:
Remove input labels.
2022-01-07 02:42:18 +01:00
Tobias Geerinckx-Rice b2f55787ef
gnu: pioneer: Fix build.
* gnu/packages/games (pioneer)[inputs]:
Downgrade libsigc++ to libsigc++-2.
2022-01-07 02:42:09 +01:00
Tobias Geerinckx-Rice ace78ef294
gnu: pioneer: Remove input labels.
* gnu/packages/games.scm (pioneer)[inputs]:
Remove input labels.
2022-01-07 02:41:17 +01:00
Tobias Geerinckx-Rice 95100cc62b
gnu: edgar: Remove input labels.
* gnu/packages/games.scm (edgar)[inputs, native-inputs]:
Remove input labels.
2022-01-07 02:41:17 +01:00
Tobias Geerinckx-Rice cd200a761d
gnu: edgar: Update to 1.35.
* gnu/packages/games.scm (edgar): Update to 1.35.
2022-01-07 02:41:17 +01:00
Tobias Geerinckx-Rice 2b83619a72
gnu: love: Update to 11.4.
* gnu/packages/game-development.scm (love): Update to 11.4.
[source]: Update upstream URL.
2022-01-07 02:41:17 +01:00
Tobias Geerinckx-Rice 6d4573250d
gnu: liburcu: Update to 0.13.1.
* gnu/packages/datastructures.scm (liburcu): Update to 0.13.1.
2022-01-07 02:41:16 +01:00
Tobias Geerinckx-Rice cfd68599ff
gnu: suil: Remove input labels.
* gnu/packages/audio.scm (suil)[inputs]: Remove input labels.
2022-01-07 02:41:16 +01:00
Tobias Geerinckx-Rice 6601772827
gnu: suil: Update to 0.10.10.
* gnu/packages/audio.scm (suil): Update to 0.10.10.
2022-01-07 02:41:16 +01:00
Tobias Geerinckx-Rice bb61093b20
gnu: ndctl: Update to 72.1.
* gnu/packages/disk.scm (ndctl): Update to 72.1.
[arguments]: Remove obsolete 'fix-include phase.
2022-01-07 02:41:16 +01:00
Tobias Geerinckx-Rice f17f3e59f8
gnu: ndctl: Fix version reporting.
* gnu/packages/disk.scm (ndctl)[arguments]: Add a 'fix-version phase.
2022-01-07 02:41:16 +01:00
Nicolas Goaziou f1dcd661f8
gnu: emacs-evil-nerd-commenter: Update to 3.5.6.
* gnu/packages/emacs-xyz.scm (emacs-evil-nerd-commenter): Update to 3.5.6.
2022-01-06 21:03:37 +01:00
Efraim Flashner c0f612de35
gnu: evisum: Remove input labels.
* gnu/packages/enlightenment.scm (evisum)[native-inputs]: Remove package
labels.
2022-01-06 21:35:04 +02:00
Efraim Flashner 6edf6aa64e
gnu: evisum: Update to 0.6.0.
* gnu/packages/enlightenment.scm (evisum): Update to 0.6.0.
2022-01-06 21:35:04 +02:00
Efraim Flashner 08836256ac
gnu: enlightenment: Update to 0.25.1.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.25.1.
2022-01-06 21:35:04 +02:00
Efraim Flashner 57bf228b66
gnu: terminology: Respect #:tests? flag.
* gnu/packages/enlightenment.scm (terminology)[arguments]: Adjust custom
'check phase to honor the #:tests? flag.
2022-01-06 21:35:03 +02:00
Efraim Flashner c24ffc3aae
gnu: terminology: Remove input labels.
* gnu/packages/enlightenment.scm (terminology)[native-inputs]: Remove
package labels.
2022-01-06 21:35:03 +02:00
Efraim Flashner 26bd033fac
gnu: terminology: Update to 1.12.1.
* gnu/packages/enlightenment.scm (terminology): Update to 1.12.1.
[source]: Remove trailing #t.
[arguments]: Remove trailing #t from phases.
2022-01-06 21:35:03 +02:00
Efraim Flashner 0997d1fddd
gnu: efl: Update to 1.26.1.
* gnu/packages/enlightenment.scm (efl): Update to 1.26.1.
2022-01-06 21:35:03 +02:00
Tobias Geerinckx-Rice b4263f12ed
gnu: tremc: Fix execution with recent Python.
* gnu/packages/bittorrent.scm (tremc)[source]: Add patch.
* gnu/packages/patches/tremc-fix-decodestring.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Reported by gnoo in #guix
2022-01-06 19:36:40 +01:00
John Kehayias b1cf1d44f4
gnu: Add openrgb.
* gnu/packages/hardware.scm (openrgb): New variable.
* gnu/packages/patches/openrgb-unbundle-hueplusplus.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2022-01-06 13:18:27 -05:00
John Kehayias fb8568857f
gnu: Add hueplusplus.
* gnu/packages/hardware.scm (hueplusplus): New variable.
* gnu/packages/patches/hueplusplus-mbedtls.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2022-01-06 13:18:19 -05:00
Tobias Geerinckx-Rice 2860bb2779
gnu: mdadm-static: Fix build.
This follows up on commit 3d7a1b84c5.

* gnu/packages/linux.scm (mdadm-static)[arguments]:
Add "-DNO_LIBUDEV" to CXFLAGS.
2022-01-06 17:11:33 +01:00
Tobias Geerinckx-Rice 55bf2d31e9
gnu: mdadm-static: Use G-expressions.
* gnu/packages/linux.scm (mdadm-static)[arguments]:
Rewrite as G-expressions.

Reported by Christopher Baines <mail@cbaines.net>
2022-01-06 16:57:06 +01:00
Ludovic Courtès af1b5de6d8
gnu: gfortran-toolchain, gdc-toolchain: Make visible again.
These two packages were made accidentally "hidden" in commit
2576e2019d.

* gnu/packages/commencement.scm (make-gcc-toolchain): Remove the
'hidden?' property.
2022-01-06 16:27:31 +01:00
Ludovic Courtès 93e6a11994
gnu: guile-next: Update to 3.0.7-d70c1db.
* gnu/packages/guile.scm (guile-next): Update to 3.0.7, commit d70c1db.
2022-01-06 16:27:31 +01:00
Ludovic Courtès a21590dabf
gnu: gettext: Work around Gnulib test failures on armhf-linux.
* gnu/packages/gettext.scm (gettext-minimal)[arguments]: In
'patch-tests' phase, conditionally apply "coreutils-gnulib-tests.patch"
on ARMv7.
2022-01-06 16:27:31 +01:00
Ludovic Courtès 495ac045a3
gnu: gettext: Use gexps for arguments.
* gnu/packages/gettext.scm (gettext-minimal)[arguments]: Use gexps.
(gnu-gettext)[arguments]: Likewise.
2022-01-06 16:27:30 +01:00
Christopher Baines 90bc18bcd4
gnu: guix-build-coordinator: Update to 0-46.309fc55.
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-46.309fc55.
2022-01-06 13:13:22 +00:00
Mathieu Othacehe 5d2b8b0ee3
system: vm: Restore default RAM size to 512MB.
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Restore it.
2022-01-06 10:43:14 +01:00
Mathieu Othacehe 67429314e4
gnu: python-intelhex: Update to 2.3.0.
* gnu/packages/python-xyz.scm (python-intelhex): Update to 2.3.0.
[arguments]: Enable the tests.
2022-01-06 10:10:53 +01:00
Mathieu Othacehe cd4092b7a3
services: gnome: Add udev rules.
Fixes: <https://issues.guix.gnu.org/32166>.

* gnu/services/desktop.scm (gnome-packages, gnome-udev-rules): New procedures.
(gnome-polkit-settings): Use the gnome-packages procedure.
(gnome-desktop-service-type): Add an udev service extension.
2022-01-06 09:26:39 +01:00
Mathieu Othacehe 2e691011bf
gnu: gnome-settings-daemon: Fix udev directory.
* gnu/packages/gnome.scm (gnome-settings-daemon)[arguments]
{#:configure-flags}: Fix the udev directory.
2022-01-06 09:26:38 +01:00
Efraim Flashner 4faade1285
gnu: go-github-com-microcosm-cc-bluemonday: Adjust inputs.
* gnu/packages/golang.scm (go-github-com-microcosm-cc-bluemonday)
[native-inputs]: Remove go-github-com-aymeric-douceur,
go-github-com-gorillia-css.  Move go-github-com-chris-ramon-douceur,
go-glang-org-x-net ...
[propagated-inputs]: ... to here.
2022-01-06 09:25:55 +02:00
Ricardo Wurmus ad82f2a231
gnu: r-tximeta: Update to 1.12.4.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.12.4.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus cc16a10005
gnu: r-tcgabiolinks: Update to 2.22.2.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.22.2.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 2d4ce9bb5f
gnu: r-biodb: Update to 1.2.2.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.2.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus fdae05747c
gnu: r-sushi: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.32.0.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 76d7f23d04
gnu: r-bioassayr: Update to 1.32.1.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.32.1.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 04e2461e26
gnu: r-universalmotif: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.2.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 7ab194b88c
gnu: r-cytolib: Update to 2.6.1.
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.1.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 489edb479d
gnu: r-clusterprofiler: Update to 4.2.1.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.1.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 365f04e026
gnu: r-icobra: Update to 1.22.2.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.2.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 0be8a3e525
gnu: r-destiny: Update to 3.8.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.0.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 7227f93703
gnu: r-diffbind: Update to 3.4.3.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.3.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus b8dddafa7c
gnu: r-systempiper: Update to 2.0.5.
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.5.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 013cda4abb
gnu: r-structuralvariantannotation: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.10.1.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus f9288cdf7c
gnu: r-genomicfeatures: Update to 1.46.3.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.3.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 4fc0a88a91
gnu: r-chipseeker: Update to 1.30.3.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.3.
2022-01-06 07:49:41 +01:00
Ricardo Wurmus 9bf3a18fb6
gnu: r-biocparallel: Update to 1.28.3.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.3.
2022-01-06 07:49:40 +01:00
Ricardo Wurmus ae00bf2d5e
gnu: r-yapsa: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.20.1.
[propagated-inputs]: Remove r-pmcmr; add r-pmcmrplus.
2022-01-06 07:49:37 +01:00
Leo Famulari 85f006c8e8
services: Document the full list of available NTP URLs.
* gnu/services/networking.scm (%ntp-servers): List the URLs granted to us.
2022-01-06 01:30:27 -05:00
Tobias Geerinckx-Rice 457416bb1b
gnu: godot: Remove input labels.
* gnu/packages/game-development.scm (godot)[inputs]: Remove input labels.
[arguments]: Tweak accordingly.
2022-01-06 06:21:31 +01:00
Tobias Geerinckx-Rice 8f90ff4cb8
gnu: godot: Update to 3.4.2.
* gnu/packages/game-development.scm (godot): Update to 3.4.2.
[arguments]: Don't explicitly return #t from phases.
2022-01-06 06:21:31 +01:00
Leo Famulari aebfc1425d
gnu: linux-libre 4.4: Update to 4.4.298.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.298.
(linux-libre-4.4-pristine-source): Update hash.
2022-01-05 23:39:15 -05:00
Leo Famulari 5f12ef9276
gnu: linux-libre 4.9: Update to 4.9.296.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.296.
(linux-libre-4.9-pristine-source): Update hash.
2022-01-05 23:39:15 -05:00
Leo Famulari d603ef332e
gnu: linux-libre 4.14: Update to 4.14.261.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.261.
(linux-libre-4.14-pristine-source): Update hash.
2022-01-05 23:39:15 -05:00
Leo Famulari 66ea2b6a64
gnu: linux-libre 4.19: Update to 4.19.224.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.224.
(linux-libre-4.19-pristine-source): Update hash.
2022-01-05 23:39:15 -05:00
Leo Famulari 38b9a0388d
gnu: linux-libre 5.4: Update to 5.4.170.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.170.
(linux-libre-5.4-pristine-source): Update hash.
2022-01-05 23:39:14 -05:00
Leo Famulari 973403e613
gnu: linux-libre 5.10: Update to 5.10.90.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.90.
(linux-libre-5.10-pristine-source): Update hash.
2022-01-05 23:39:14 -05:00
Leo Famulari 55fd53b0db
gnu: linux-libre: Update to 5.15.13.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.13.
(linux-libre-5.15-pristine-source): Update hash.
2022-01-05 23:39:08 -05:00
Tobias Geerinckx-Rice b18fb4bf77
gnu: snapraid: Update to 12.0.
* gnu/packages/backup.scm (snapraid): Update to 12.0.
2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice 70a229aafe
gnu: snapraid: ‘Fix’ build.
* gnu/packages/backup.scm (snapraid)[arguments]:
Remove "--enable-valgrind" from #:configure-flags.
[native-inputs]: Remove valgrind.
2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice e3c9860ab9
gnu: snapraid: Use G-expressions.
* gnu/packages/backup.scm (snapraid)[arguments]:
Rewrite as G-expressions.
2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice 4f488fb545
gnu: wimlib: Update to 1.13.5.
* gnu/packages/backup.scm (wimlib): Update to 1.13.5.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 38ee3d616d
gnu: borgmatic: Use G-expressions.
* gnu/packages/backup.scm (borgmatic)[arguments]:
Rewrite as G-expressions.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 2c9bc8408e
gnu: borgmatic: Update to 1.5.22.
* gnu/packages/backup.scm (borgmatic): Update to 1.5.22.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 1326b36073
gnu: pan: Use G-expressions.
* gnu/packages/mail.scm (pan)[arguments]:
Rewrite as G-expressions.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 0d78ac083a
gnu: pan: Update to 0.149.
* gnu/packages/mail.scm (pan): Update to 0.149.
[arguments]: Don't explicitly return #t from phases.
[inputs]: Upgrade gmime-2.6 to gmime.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice f9fe99b4cd
gnu: xxhash: Use G-expressions.
* gnu/packages/digest.scm (xxhash)[arguments]:
Rewrite as G-expressions.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 7608d2d05d
gnu: xxhash: Update to 0.8.1.
* gnu/packages/digest.scm (xxhash): Update to 0.8.1.
[arguments]: Add a new 'fix-man-page-links phase.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 24b04f5d4e
gnu: toybox: Use G-expressions.
* gnu/packages/busybox.scm (toybox)[arguments]:
Rewrite as G-expressions.
2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice 7a96516f60
gnu: toybox: Update to 0.8.6.
* gnu/packages/busybox.scm (toybox): Update to 0.8.6.
2022-01-06 05:24:16 +01:00
Tobias Geerinckx-Rice e2a1419799
gnu: vice: Update to 3.6.
* gnu/packages/emulators.scm (vice): Update to 3.6.
[arguments]: Add "--disable-html-docs" to #:configure-flags.
2022-01-06 05:24:16 +01:00
Tobias Geerinckx-Rice a2ea9ea300
gnu: xchm: Update to 1.33.
* gnu/packages/ebook.scm (xchm): Update to 1.33.
2022-01-06 05:24:16 +01:00
Tobias Geerinckx-Rice 0791b10909
gnu: knot-resolver: Update to 5.4.4.
* gnu/packages/dns.scm (knot-resolver): Update to 5.4.4.
2022-01-06 05:24:16 +01:00
Maxim Cournoyer c233b7b422
gnu: cqfd: Update to 5.3.0.
* gnu/packages/docker.scm (cqfd): Update to 5.3.0.
2022-01-05 23:02:25 -05:00
Tanguy Le Carrour c468db2e56
gnu: python-urwidtrees: Build with python-mock.
This fixes a build failure in the 'sanity-check' phase.

* gnu/packages/python-xyz.scm (python-urwidtrees)[native-inputs]: Add
python-mock.

Signed-off-by: Leo Famulari <leo@famulari.name>
2022-01-05 18:10:47 -05:00
Sharlatan Hellseher 9765768950
gnu: go-github-com-hashicorp-hcl: Update to 1.0.0.
* gnu/packages/golang:
  Use the latest tag for HCL V1 instead of commit
  [native-inputs]: add go-github-com-davecgh-go-spew

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:20 +01:00
Maxime Devos bd43300c65
gnu: minetest-unified-inventory: Update to 2021-12-26.
* gnu/packages/minetest.scm (minetest-unified-inventory): Update to 2021-12-26.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:20 +01:00
Maxime Devos e2ba986b98
gnu: minetest-technic: Update to 2021-09-11.
* gnu/packages/minetest.scm (minetest-technic): Update to 2021-09-11.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:19 +01:00
Maxime Devos 96ba33a869
gnu: minetest-mobs-animal: Update to 2021-11-14.
* gnu/packages/minetest.scm (minetest-mobs-animal): Update to 2021-11-14.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:19 +01:00
Maxime Devos 0c468d5b7f
gnu: minetest-mobs: Update to 2021-12-12.
* gnu/packages/minetest.scm (minetest-mobs): Update to 2021-12-12.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:19 +01:00
Maxime Devos 9d88c4a2a6
gnu: minetest-homedecor-modpack: Update to 2021-12-26.
* gnu/packages/minetest.scm (minetest-homedecor-modpack): Update to 2021-12-26.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:19 +01:00
Maxime Devos 34bc83486d
gnu: minetest-basic-materials: Update to 2021-12-26.
* gnu/packages/minetest.scm (minetest-basic-materials): Update to 2021-12-26.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:19 +01:00
Artyom V. Poptsov 3c86268004
gnu: guile-udev: Update to 0.2.3
* gnu/packages/guile-xyz.scm (guile-udev): Update to 0.2.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:19 +01:00
Ludovic Courtès 282197b521
gnu: tootle: Remove trailing #t in phases.
* gnu/packages/mastodon.scm (tootle)[arguments]: Remove trailing #t.
2022-01-05 23:44:18 +01:00
Ludovic Courtès f2d304ac98
gnu: tootle: Simplify inputs.
* gnu/packages/mastodon.scm (tootle)[native-inputs]: Simplify.
2022-01-05 23:44:18 +01:00
Taiju HIGASHI b0d25a7118
gnu: tootle: Fix build.
* gnu/packages/patches/tootle-glib-object-naming.patch,
gnu/packages/patches/tootle-reason-phrase.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/mastodon.scm (tootle)[source]: Use them.
[inputs]: Use LIBSOUP-MINIMAL-2 instead of LIBSOUP.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:18 +01:00
Ryan Sundberg bfdeba11f8
linux-container: Handle CLONE_NEWCGROUP and use it by default.
Adds low-level support for launching Linux containers with cgroup namespaces.

* gnu/build/linux-container.scm (%namespaces): Add 'cgroup.
(namespaces->bit-mask): Handle it.
* guix/build/syscalls.scm (CLONE_NEWCGROUP): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-01-05 23:44:18 +01:00
Tobias Geerinckx-Rice 2c1807c516
gnu: haveged: Update to 1.9.16.
* gnu/packages/linux.scm (haveged): Update to 1.9.16.
2022-01-05 23:33:56 +01:00
Tobias Geerinckx-Rice f16b6fd970
gnu: mdadm: Use G-expressions.
* gnu/packages/linux.scm (mdadm)[arguments]:
Rewrite as G-expressions.
[inputs]: Move under arguments.  Remove input labels.
2022-01-05 23:33:56 +01:00
Tobias Geerinckx-Rice 3d7a1b84c5
gnu: mdadm: Update to 4.2.
* gnu/packages/linux.scm (mdadm): Update to 4.2.
[arguments]: Don't explicitly return #t from phases.
2022-01-05 23:33:56 +01:00
Ricardo Wurmus 3aa3aea2b0
gnu: Add r-pmcmrplus.
* gnu/packages/cran.scm (r-pmcmrplus): New variable.
2022-01-05 23:09:42 +01:00
Ricardo Wurmus 19e0b39361
gnu: Add r-multcompview.
* gnu/packages/cran.scm (r-multcompview): New variable.
2022-01-05 23:09:41 +01:00
Ricardo Wurmus 8908b234a8
gnu: Add r-bwstest.
* gnu/packages/cran.scm (r-bwstest): New variable.
2022-01-05 23:09:41 +01:00
raid5atemyhomework e1c1299054
gnu: zfs: Update to 2.1.2.
* gnu/packages/file-systems.scm (zfs): Update to 2.1.2.
2022-01-05 22:24:50 +01:00
Arun Isaac f8633a7395
gnu: Add guile-kolam.
* gnu/packages/guile-xyz.scm (guile-kolam): New variable.
2022-01-05 22:12:58 +01:00
John Kehayias c37559e819
gnu: syncthing-gtk: Make the autostart mechanism invoke the correct executable.
Fixes <https://issues.guix.gnu.org/50789>.

* gnu/packages/syncthing.scm (syncthing-gtk)[arguments]: Add a
'fix-autostart-path' phase.
2022-01-05 16:10:47 -05:00
Nicolas Goaziou f5da992b16
gnu: emacs-org-roam-bibtex: Update to 0.6.2.
* gnu/packages/emacs-xyz.scm (emacs-org-roam-bibtex): Update to 0.6.2.
2022-01-05 22:07:24 +01:00
Felix Gruber 707acc4cfb
gnu: supertux: Update to 0.6.3.
* gnu/packages/games.scm (supertux): Update to 0.6.3.
[inputs] Sort list and add glm.
* gnu/packages/patches/supertux-unbundle-squirrel.patch: Adjust patch to
apply with upstream changes.

Signed-off-by: Leo Famulari <leo@famulari.name>
2022-01-05 15:50:59 -05:00
Ricardo Wurmus 0fea9aec59
doc: Only use GDM and GNOME on x86_64.
* gnu/system/examples/desktop.tmpl: Only use gnome-desktop-service-type and
the default login manager in set-xorg-configuration when the target system is
x86_64.
2022-01-05 21:46:41 +01:00
Ricardo Wurmus f831bb75f1
gnu: r-credentials: Use new input style.
* gnu/packages/cran.scm (r-credentials)[inputs]: Use new input style.
2022-01-05 21:41:12 +01:00
Ricardo Wurmus 8138142799
gnu: r-credentials: Remove trailing #T.
* gnu/packages/cran.scm (r-credentials)[arguments]: Remove trailing #T from
build phase.
2022-01-05 21:40:51 +01:00
Ricardo Wurmus 16ed462ab1
gnu: r-curl: Use new input style.
* gnu/packages/cran.scm (r-curl)[inputs]: Use new input style.
2022-01-05 21:40:19 +01:00
Ricardo Wurmus 62dc81a958
gnu: r-v8: Use new input style.
* gnu/packages/cran.scm (r-v8)[arguments]: Use standard name as label.
[inputs]: Use new style.
2022-01-05 21:36:29 +01:00
Ricardo Wurmus 36d2a03edc
gnu: r-desctools: Update to 0.99.44.
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.44.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus 55429348f1
gnu: r-exact: Update to 3.1.
* gnu/packages/statistics.scm (r-exact): Update to 3.1.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus 33710d4e39
gnu: r-gld: Update to 2.6.4.
* gnu/packages/statistics.scm (r-gld): Update to 2.6.4.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus c6e46ce44b
gnu: r-bayesfactor: Update to 0.9.12-4.3.
* gnu/packages/statistics.scm (r-bayesfactor): Update to 0.9.12-4.3.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus afe3f9f51d
gnu: r-cairo: Update to 1.5-14.
* gnu/packages/statistics.scm (r-cairo): Update to 1.5-14.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus fe816ea9f5
gnu: r-sn: Update to 2.0.1.
* gnu/packages/statistics.scm (r-sn): Update to 2.0.1.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus e77c46f654
gnu: r-deoptimr: Update to 1.0-10.
* gnu/packages/statistics.scm (r-deoptimr): Update to 1.0-10.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus 266562da22
gnu: r-mclust: Update to 5.4.9.
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.9.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus 0858d957ba
gnu: r-irlba: Update to 2.3.5.
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.5.
2022-01-05 21:18:13 +01:00
Ricardo Wurmus db2d774fd3
gnu: r-rsqlite: Update to 2.2.9.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.9.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus 8f1288c2f7
gnu: r-rcpparmadillo: Update to 0.10.7.5.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.7.5.0.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus ff2e3350fa
gnu: r-readr: Update to 2.1.1.
* gnu/packages/statistics.scm (r-readr): Update to 2.1.1.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus 57392d40bf
gnu: r-withr: Update to 2.4.3.
* gnu/packages/statistics.scm (r-withr): Update to 2.4.3.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus 861ae819e3
gnu: r-devtools: Update to 2.4.3.
* gnu/packages/statistics.scm (r-devtools): Update to 2.4.3.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus a68ac65910
gnu: r-backports: Update to 1.4.1.
* gnu/packages/statistics.scm (r-backports): Update to 1.4.1.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus d35ac14572
gnu: r-xml2: Update to 1.3.3.
* gnu/packages/statistics.scm (r-xml2): Update to 1.3.3.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus ffbd40eee6
gnu: r-testthat: Update to 3.1.1.
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.1.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus 8593846517
gnu: r-memoise: Update to 2.0.1.
* gnu/packages/statistics.scm (r-memoise): Update to 2.0.1.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus b4a2db20ba
gnu: r-knitr: Update to 1.37.
* gnu/packages/statistics.scm (r-knitr): Update to 1.37.
2022-01-05 21:18:12 +01:00
Ricardo Wurmus 26d47e68fa
gnu: r-bh: Update to 1.78.0-0.
* gnu/packages/statistics.scm (r-bh): Update to 1.78.0-0.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus ccd7d9f8c2
gnu: r-dbi: Update to 1.1.2.
* gnu/packages/statistics.scm (r-dbi): Update to 1.1.2.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus a6a02a955e
gnu: r-stringi: Update to 1.7.6.
* gnu/packages/statistics.scm (r-stringi): Update to 1.7.6.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus 4a7afefa85
gnu: r-digest: Update to 0.6.29.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.29.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus b77de3ca6f
gnu: r-matrix: Update to 1.4-0.
* gnu/packages/statistics.scm (r-matrix): Update to 1.4-0.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus 593667a8c0
gnu: r-ggh4x: Update to 0.2.1.
* gnu/packages/cran.scm (r-ggh4x): Update to 0.2.1.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus 8f9b7ee002
gnu: r-paws-common: Update to 0.3.15.
* gnu/packages/cran.scm (r-paws-common): Update to 0.3.15.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus 1b48f85034
gnu: r-rgeos: Update to 0.5-9.
* gnu/packages/cran.scm (r-rgeos): Update to 0.5-9.
2022-01-05 21:18:11 +01:00
Ricardo Wurmus 62c7050cef
gnu: r-qs: Update to 0.25.2.
* gnu/packages/cran.scm (r-qs): Update to 0.25.2.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus 7534d44e6d
gnu: r-stringfish: Update to 0.15.5.
* gnu/packages/cran.scm (r-stringfish): Update to 0.15.5.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus eca189bf5b
gnu: r-exactextractr: Update to 0.7.2.
* gnu/packages/cran.scm (r-exactextractr): Update to 0.7.2.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus 11282df15e
gnu: r-opencpu: Update to 2.2.6.
* gnu/packages/cran.scm (r-opencpu): Update to 2.2.6.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus 540a0763fc
gnu: r-vroom: Update to 1.5.7.
* gnu/packages/cran.scm (r-vroom): Update to 1.5.7.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus 086fb6d56d
gnu: r-stars: Update to 0.5-5.
* gnu/packages/cran.scm (r-stars): Update to 0.5-5.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus e4c498ff6d
gnu: r-pkgdown: Update to 2.0.1.
* gnu/packages/cran.scm (r-pkgdown): Update to 2.0.1.
[propagated-inputs]: Add bslib and r-jsonlite; remove r-openssl and
r-rematch2.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus fa7161fcf9
gnu: r-ragg: Update to 1.2.1.
* gnu/packages/cran.scm (r-ragg): Update to 1.2.1.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus e99491d81d
gnu: r-mlr3pipelines: Update to 0.4.0.
* gnu/packages/cran.scm (r-mlr3pipelines): Update to 0.4.0.
2022-01-05 21:18:10 +01:00
Ricardo Wurmus ee29912569
gnu: r-calculus: Update to 0.3.2.
* gnu/packages/cran.scm (r-calculus): Update to 0.3.2.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus d16effe7f9
gnu: r-phangorn: Update to 2.8.1.
* gnu/packages/cran.scm (r-phangorn): Update to 2.8.1.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus 8814b5ae8d
gnu: r-seurat: Update to 4.0.6.
* gnu/packages/cran.scm (r-seurat): Update to 4.0.6.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus 2815f89717
gnu: r-seuratobject: Update to 4.0.4.
* gnu/packages/cran.scm (r-seuratobject): Update to 4.0.4.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus 82dbfd699e
gnu: r-maldiquant: Update to 1.21.
* gnu/packages/cran.scm (r-maldiquant): Update to 1.21.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus 2d2b6d7ea5
gnu: r-conflicted: Update to 1.1.0.
* gnu/packages/cran.scm (r-conflicted): Update to 1.1.0.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus 9b13f04206
gnu: r-yardstick: Update to 0.0.9.
* gnu/packages/cran.scm (r-yardstick): Update to 0.0.9.
2022-01-05 21:18:09 +01:00
Ricardo Wurmus e25fba029b
gnu: r-igraph: Update to 1.2.10.
* gnu/packages/cran.scm (r-igraph): Update to 1.2.10.
2022-01-05 21:18:08 +01:00
Ricardo Wurmus 8bd5d056f4
gnu: r-rfast: Update to 2.0.4.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.4.
2022-01-05 21:18:08 +01:00
Ricardo Wurmus 9c52d5661a
gnu: r-cpp11: Update to 0.4.2.
* gnu/packages/cran.scm (r-cpp11): Update to 0.4.2.
2022-01-05 21:18:08 +01:00
Ricardo Wurmus ee8645a09e
gnu: r-spatstat: Update to 2.3-0.
* gnu/packages/cran.scm (r-spatstat): Update to 2.3-0.
2022-01-05 21:18:08 +01:00
Ricardo Wurmus 81c7c3548c
gnu: r-spatstat-linnet: Update to 2.3-1.
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 2.3-1.
2022-01-05 21:18:08 +01:00
Ricardo Wurmus fa564e5799
gnu: r-spatstat-core: Update to 2.3-2.
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.3-2.
2022-01-05 21:18:08 +01:00
Ricardo Wurmus d7b9424710
gnu: r-spatstat-geom: Update to 2.3-1.
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.3-1.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus 200e51adfd
gnu: r-spatstat-data: Update to 2.1-2.
* gnu/packages/cran.scm (r-spatstat-data): Update to 2.1-2.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus deb80f1548
gnu: r-spatstat-sparse: Update to 2.1-0.
* gnu/packages/cran.scm (r-spatstat-sparse): Update to 2.1-0.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus 421318e1de
gnu: r-spatstat-utils: Update to 2.3-0.
* gnu/packages/cran.scm (r-spatstat-utils): Update to 2.3-0.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus 46c5659a36
gnu: r-fastshap: Update to 0.0.7.
* gnu/packages/cran.scm (r-fastshap): Update to 0.0.7.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus 64d9529e7c
gnu: r-brms: Update to 2.16.3.
* gnu/packages/cran.scm (r-brms): Update to 2.16.3.
[propagated-inputs]: Remove r-projpred.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus bcf7f926eb
gnu: r-keyring: Update to 1.3.0.
* gnu/packages/cran.scm (r-keyring): Update to 1.3.0.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus 62a43dad1b
gnu: r-rstan: Update to 2.21.3.
* gnu/packages/cran.scm (r-rstan): Update to 2.21.3.
[propagated-inputs]: Remove r-v8 and r-withr.
2022-01-05 21:18:07 +01:00
Ricardo Wurmus 4b955f9454
gnu: r-polycor: Update to 0.8-0.
* gnu/packages/cran.scm (r-polycor): Update to 0.8-0.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus 9aebde6d38
gnu: r-quanteda: Update to 3.2.0.
* gnu/packages/cran.scm (r-quanteda): Update to 3.2.0.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus 1c12d1f239
gnu: r-proxyc: Update to 0.2.4.
* gnu/packages/cran.scm (r-proxyc): Update to 0.2.4.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus 75d3010c22
gnu: r-anthropometry: Update to 1.17.
* gnu/packages/cran.scm (r-anthropometry): Update to 1.17.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus 64680d3146
gnu: r-reldist: Update to 1.7-0.
* gnu/packages/cran.scm (r-reldist): Update to 1.7-0.
[propagated-inputs]: Add r-densestbayes.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus 267a284a7a
gnu: r-abtest: Update to 1.0.1.
* gnu/packages/cran.scm (r-abtest): Update to 1.0.1.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus d094209286
gnu: r-qgam: Update to 1.3.4.
* gnu/packages/cran.scm (r-qgam): Update to 1.3.4.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus ba180e885c
gnu: r-pracma: Update to 2.3.6.
* gnu/packages/cran.scm (r-pracma): Update to 2.3.6.
2022-01-05 21:18:06 +01:00
Ricardo Wurmus d523463654
gnu: r-rgdal: Update to 1.5-28.
* gnu/packages/cran.scm (r-rgdal): Update to 1.5-28.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus ef74872125
gnu: r-terra: Update to 1.4-22.
* gnu/packages/cran.scm (r-terra): Update to 1.4-22.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus b16f0e55a8
gnu: r-graphlayouts: Update to 0.8.0.
* gnu/packages/cran.scm (r-graphlayouts): Update to 0.8.0.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus 8641947eaa
gnu: r-uwot: Update to 0.1.11.
* gnu/packages/cran.scm (r-uwot): Update to 0.1.11.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus 19257cd24e
gnu: r-ggfortify: Update to 0.4.14.
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.14.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus d7cfb89536
gnu: r-rsparse: Update to 0.5.0.
* gnu/packages/cran.scm (r-rsparse): Update to 0.5.0.
[propagated-inputs]: Add r-matrixextra.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus 84b8ded6a9
gnu: r-rex: Update to 1.2.1.
* gnu/packages/cran.scm (r-rex): Update to 1.2.1.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus e70c6fcfdf
gnu: r-rjava: Update to 1.0-6.
* gnu/packages/cran.scm (r-rjava): Update to 1.0-6.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus 3ec07eab56
gnu: r-pegas: Update to 1.1.
* gnu/packages/cran.scm (r-pegas): Update to 1.1.
[propagated-inputs]: Remove r-adegenet.
2022-01-05 21:18:05 +01:00
Ricardo Wurmus 1f914b1476
gnu: r-spdep: Update to 1.1-13.
* gnu/packages/cran.scm (r-spdep): Update to 1.1-13.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus 7a6af65660
gnu: r-sf: Update to 1.0-5.
* gnu/packages/cran.scm (r-sf): Update to 1.0-5.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus fc9f3a1fe3
gnu: r-wk: Update to 0.6.0.
* gnu/packages/cran.scm (r-wk): Update to 0.6.0.
[propagated-inputs]: Remove r-cpp11.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus 7fd640260c
gnu: r-sets: Update to 1.0-20.
* gnu/packages/cran.scm (r-sets): Update to 1.0-20.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus ba7c9cebaa
gnu: r-irkernel: Update to 1.3.
* gnu/packages/cran.scm (r-irkernel): Update to 1.3.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus ef3d590b6f
gnu: r-irdisplay: Update to 1.1.
* gnu/packages/cran.scm (r-irdisplay): Update to 1.1.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus 2774af54b7
gnu: r-repr: Update to 1.1.4.
* gnu/packages/cran.scm (r-repr): Update to 1.1.4.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus df700d0a7c
gnu: r-shinyjs: Update to 2.1.0.
* gnu/packages/cran.scm (r-shinyjs): Update to 2.1.0.
[propagated-inputs]: Remove r-htmltools.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus 583965a89a
gnu: r-parallelly: Update to 1.30.0.
* gnu/packages/cran.scm (r-parallelly): Update to 1.30.0.
2022-01-05 21:18:04 +01:00
Ricardo Wurmus ea42d7fd71
gnu: r-fmsb: Update to 0.7.2.
* gnu/packages/cran.scm (r-fmsb): Update to 0.7.2.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus ffced01644
gnu: r-ks: Update to 1.13.3.
* gnu/packages/cran.scm (r-ks): Update to 1.13.3.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus 3693c56b89
gnu: r-ncdf4: Update to 1.19.
* gnu/packages/cran.scm (r-ncdf4): Update to 1.19.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus 1b77ed8968
gnu: r-remotes: Update to 2.4.2.
* gnu/packages/cran.scm (r-remotes): Update to 2.4.2.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus dceb298991
gnu: r-sessioninfo: Update to 1.2.2.
* gnu/packages/cran.scm (r-sessioninfo): Update to 1.2.2.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus dc66d59fd4
gnu: r-usethis: Update to 2.1.5.
* gnu/packages/cran.scm (r-usethis): Update to 2.1.5.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus b83f1507d8
gnu: r-gert: Update to 1.5.0.
* gnu/packages/cran.scm (r-gert): Update to 1.5.0.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus 98dae5afe8
gnu: r-credentials: Update to 1.3.2.
* gnu/packages/cran.scm (r-credentials): Update to 1.3.2.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus c7f7565a26
gnu: r-fs: Update to 1.5.2.
* gnu/packages/cran.scm (r-fs): Update to 1.5.2.
2022-01-05 21:18:03 +01:00
Ricardo Wurmus 299c6bee4b
gnu: r-sjplot: Update to 2.8.10.
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.10.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 4947de6cc1
gnu: r-emmeans: Update to 1.7.2.
* gnu/packages/cran.scm (r-emmeans): Update to 1.7.2.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus e125f8cd95
gnu: r-multcomp: Update to 1.4-18.
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-18.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 5319f8a582
gnu: r-abundant: Update to 1.2.
* gnu/packages/cran.scm (r-abundant): Update to 1.2.
[propagated-inputs]: Remove r-quic; add r-glasso.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus de3a354107
gnu: r-raster: Update to 3.5-11.
* gnu/packages/cran.scm (r-raster): Update to 3.5-11.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 85b2f49cc0
gnu: r-argparse: Update to 2.1.3.
* gnu/packages/cran.scm (r-argparse): Update to 2.1.3.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 5bdb2f59b8
gnu: r-sjmisc: Update to 2.8.9.
* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.9.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 10dd00af24
gnu: r-rdpack: Update to 2.1.3.
* gnu/packages/cran.scm (r-rdpack): Update to 2.1.3.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 2fdf20c0f0
gnu: r-rbibutils: Update to 2.2.7.
* gnu/packages/cran.scm (r-rbibutils): Update to 2.2.7.
2022-01-05 21:18:02 +01:00
Ricardo Wurmus 7a5fdca2a0
gnu: r-renv: Update to 0.15.0.
* gnu/packages/cran.scm (r-renv): Update to 0.15.0.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 22e6c2a017
gnu: r-dtplyr: Update to 1.2.0.
* gnu/packages/cran.scm (r-dtplyr): Update to 1.2.0.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 8f9ab3cfdc
gnu: r-openxlsx: Update to 4.2.5.
* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.5.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 61949e5d3a
gnu: r-arules: Update to 1.7-2.
* gnu/packages/cran.scm (r-arules): Update to 1.7-2.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 42f26beb24
gnu: r-ttr: Update to 0.24.3.
* gnu/packages/cran.scm (r-ttr): Update to 0.24.3.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 2caa553d19
gnu: r-tinytex: Update to 0.36.
* gnu/packages/cran.scm (r-tinytex): Update to 0.36.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 566ad34e97
gnu: r-xfun: Update to 0.29.
* gnu/packages/cran.scm (r-xfun): Update to 0.29.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 53004bd0ee
gnu: r-venndiagram: Update to 1.7.1.
* gnu/packages/cran.scm (r-venndiagram): Update to 1.7.1.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 64953f106d
gnu: r-hardyweinberg: Update to 1.7.4.
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.4.
[propagated-inputs]: Add r-nnet.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus eafc0d0ecc
gnu: r-mice: Update to 3.14.0.
* gnu/packages/cran.scm (r-mice): Update to 3.14.0.
[propagated-inputs]: Add r-withr.
2022-01-05 21:18:01 +01:00
Ricardo Wurmus 2a1582d231
gnu: r-broom: Update to 0.7.11.
* gnu/packages/cran.scm (r-broom): Update to 0.7.11.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 5248478c10
gnu: r-rmysql: Update to 0.10.23.
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.23.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 60f0c3b46e
gnu: r-dimred: Update to 0.2.4.
* gnu/packages/cran.scm (r-dimred): Update to 0.2.4.
[native-inputs]: Add r-knitr.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 5ff9cbf368
gnu: r-progressr: Update to 0.10.0.
* gnu/packages/cran.scm (r-progressr): Update to 0.10.0.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 23d84dd96c
gnu: r-suppdists: Update to 1.1-9.7.
* gnu/packages/cran.scm (r-suppdists): Update to 1.1-9.7.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus a01709b10e
gnu: r-pkgload: Update to 1.2.4.
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.4.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus d6a544a0e6
gnu: r-pkgbuild: Update to 1.3.1.
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.3.1.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 64b9ce4b92
gnu: r-glue: Update to 1.6.0.
* gnu/packages/cran.scm (r-glue): Update to 1.6.0.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 8bfc37f725
gnu: r-ape: Update to 5.6.
* gnu/packages/cran.scm (r-ape): Update to 5.6.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 2f3eac29af
gnu: r-shadowtext: Update to 0.1.0.
* gnu/packages/cran.scm (r-shadowtext): Update to 0.1.0.
2022-01-05 21:18:00 +01:00
Ricardo Wurmus 138ce13e44
gnu: r-ggpmisc: Update to 0.4.5.
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.5.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 52a839ac52
gnu: r-ggpp: Update to 0.4.3.
* gnu/packages/cran.scm (r-ggpp): Update to 0.4.3.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 8e538e080c
gnu: r-v8: Update to 4.0.0.
* gnu/packages/cran.scm (r-v8): Update to 4.0.0.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 0d1e96cec3
gnu: r-rticles: Update to 0.22.
* gnu/packages/cran.scm (r-rticles): Update to 0.22.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 0e6fee9bc0
gnu: r-datawizard: Update to 0.2.2.
* gnu/packages/cran.scm (r-datawizard): Update to 0.2.2.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 9af1a9dd4a
gnu: r-brio: Update to 1.1.3.
* gnu/packages/cran.scm (r-brio): Update to 1.1.3.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 38e4477a8b
gnu: r-httpuv: Update to 1.6.4.
* gnu/packages/cran.scm (r-httpuv): Update to 1.6.4.
* gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch: Adjust to version
1.6.4.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 3cb1548f91
gnu: Add r-densestbayes.
* gnu/packages/cran.scm (r-densestbayes): New variable.
2022-01-05 21:17:59 +01:00
Ricardo Wurmus 9a89cee1b1
gnu: Add r-matrixextra.
* gnu/packages/cran.scm (r-matrixextra): New variable.
2022-01-05 21:17:58 +01:00
Ricardo Wurmus 231e33d636
gnu: r-activedriverwgs: Update to 1.0.3.
* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.0.3.
2022-01-05 21:17:58 +01:00
Ricardo Wurmus b615af830b
gnu: r-activedriverwgs: Update to 1.1.2.
* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.2.
[propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38,
r-bsgenome-mmusculus-ucsc-mm9, and r-bsgenome-mmusculus-ucsc-mm10.
2022-01-05 21:17:58 +01:00
Ricardo Wurmus 734e1b185f
gnu: r-valr: Update to 0.6.4.
* gnu/packages/cran.scm (r-valr): Move from here...
* gnu/packages/bioconductor.scm (r-valr): ...to here.  Update to 0.6.4.
[propagated-inputs]: Add r-rtracklayer.
2022-01-05 21:17:58 +01:00