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Author SHA1 Message Date
Ludovic Courtès bbb849f11f
gnu: cross-base: Use gexps for 'cross-gcc-arguments'. 
* gnu/packages/cross-base.scm (cross-gcc-arguments): Switch to gexps.
 2023-03-30 12:44:18 +02:00
Ludovic Courtès 065d766f09
gnu: glibc: Work around broken GNU Mach header detection. 
* gnu/packages/base.scm (%glibc/hurd-configure-flags): New variable.
(glibc)[arguments]: Use it.
(glibc/hurd-headers)[arguments]: likewise.
* gnu/packages/cross-base.scm (cross-libc*): Likewise.

Co-authored-by: Josselin Poiret <dev@jpoiret.xyz>
 2023-03-30 12:44:18 +02:00
Lars-Dominik Braun d9dc32b871
gnu: python-pyqtwebengine: Update to 5.15.9. 
* gnu/packages/qt.scm (python-pyqtwebengine): Update to 5.15.9.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pyqt-builder.
[arguments]: Move 'configure phase into #:configure-flags, drop
'make-namespace, add 'set-include-dirs.
 2023-03-30 11:54:58 +02:00
Lars-Dominik Braun 628eefa369
gnu: python-pyqt: Update to 5.15.9. 
Version 5.15.8 does not build.

* gnu/packages/qt.scm (python-pyqt): Update to 5.15.9.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pyqt-builder.
[arguments]: Disable tests, move 'configure phase into #:configure-flags.
 2023-03-30 11:54:58 +02:00
Lars-Dominik Braun 9b7e8365e2
gnu: python-pyqt-builder: Update to 1.14.1. 
* gnu/packages/qt.scm (python-pyqt-builder): Update to 1.14.1.
 2023-03-30 11:54:58 +02:00
Lars-Dominik Braun eebb0bfd68
gnu: python-sip: Update to 6.7.7. 
* gnu/packages/patches/python-sip-include-dirs.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/qt.scm (python-sip): Update to 6.7.7.
[propagated-inputs]: Add python-ply.
[source]: Use patch.
 2023-03-30 11:54:31 +02:00
Guillaume Le Vaillant c10bfa8885
gnu: ucx: Update to 1.14.0. 
* gnu/packages/fabric-management.scm (ucx): Update to 1.14.0.
* gnu/packages/patches/ucx-tcp-iface-ioctl.patch: Adapt patch to new ucx
  version.
 2023-03-27 11:34:50 +02:00
Guillaume Le Vaillant 0ac126e4f2
gnu: psm2: Update to 11.2.230. 
* gnu/packages/linux.scm (psm2): Update to 11.2.230.
 2023-03-27 11:19:58 +02:00
Guillaume Le Vaillant dcb0007ca0
gnu: vtk: Don't pin to proj-7. 
* gnu/packages/image-processing.scm (vtk)[inputs]: Replace proj-7 by proj.
 2023-03-27 11:19:58 +02:00
Josselin Poiret 68793b702e
gnu: u-boot: Fix build under Python 3.10. 
* gnu/packages/patches/u-boot-fix-build-python-3.10.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bootloaders.scm (u-boot): Apply patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-26 22:19:29 +02:00
Josselin Poiret 2a4fa1d127
gnu: opensbi: Build with default gcc, with microarch rv64g. 
* gnu/packages/firmware.scm (make-opensbi-package): Remove specific #:xgcc for
the cross-toolchain, there is not reason for it now.  Also set the microarch to
rv64g, so that it builds.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-26 22:19:26 +02:00
Guillaume Le Vaillant ef7ddc8e8b
gnu: qtquickcontrols2-5: Fix source hash. 
* gnu/packages/qt.scm (qtquickcontrols2-5)[source]: Fix hash.
 2023-03-25 22:58:58 +01:00
Guillaume Le Vaillant 2dd0101de9
gnu: python-pyzmq: Update to 25.0.2. 
* gnu/packages/python-xyz.scm (python-pyzmq): Update to 25.0.2.
  [source]: Update snippet.
  [arguments]: Add 'disable-draft-test' phase.
  [native-inputs]: Add python-pytest-asyncio and python-tornado.
 2023-03-25 20:41:51 +01:00
Guillaume Le Vaillant e0840701eb
gnu: volk: Update to 3.0.0. 
* gnu/packages/engineering.scm (volk): Update to 3.0.0.
  [arguments]: Add 'disable-check-lgpl-test' phase. Remove trailing booleans.
  [license]: Replace gpl3+ by lgpl3+. Add asl2.0.
 2023-03-25 19:23:44 +01:00
Guillaume Le Vaillant 9e0942f7a4
gnu: cl-cffi-gtk: Update to 3.8.8-3.1700fe6. 
* gnu/packages/lisp-xyz.scm (sbcl-cl-cffi-gtk): Update to 3.8.8-3.1700fe6.
  [source,home-page]: Switch to active repository.
  [inputs]: Remove labels.
  [arguments]: Update 'fix-paths' phase.
 2023-03-25 15:09:06 +01:00
Guillaume Le Vaillant 073e98a422
gnu: cl-cffi: Update to 0.24.1-1.3397035. 
* gnu/packages/lisp-xyz.scm (sbcl-cffi): Update to 0.24.1-1.3397035.
  [arguments]: Remove 'fix-arm-support' phase. Update 'fix-paths' phase.
 2023-03-25 14:12:35 +01:00
Maxim Cournoyer 1415d964ab
gnu: python-pre-commit: Move deprecated variable next to replacement. 
This fixes a module import dependency cycle, which was introduced in
831baaf81e ("gnu: python-pre-commit: Replace
with pre-commit.").  The rule of thumb to avoid these is that the deprecated
package should live next to the replacement package (in the same module).

* gnu/packages/python-xyz.scm (python-pre-commit): Move to...
* gnu/packages/version-control.scm (python-pre-commit): ... here.
 2023-03-23 10:00:25 -04:00
Kaelyn Takata 0e2e1ffc95
gnu: git: Fix missing native-inputs after commit ccb62d8feb. 
* gnu/packages/version-control.scm (git)[native-inputs]: Restore
native-inputs to what they were prior to the merge commit ccb62d8feb.

Signed-off-by: Andreas Enge <andreas@enge.fr>
 2023-03-21 15:18:56 +01:00
Josselin Poiret a973e1484d
gnu: gnulib: Depend on git-minimal/pinned. 
* gnu/packages/build-tools.scm (gnulib)[native-inputs]: Change git to
git-minimal/pinned.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-03-20 23:57:23 +01:00
Andreas Enge bfe569e84b
Merge remote-tracking branch 'origin/master' into core-updates 2023-03-20 19:03:39 +01:00
Andreas Enge 30f4b3a7e8
gnu: openjdk10: Apply patch again. 
This partially reverts commit 7636c49b45
where the patch was dropped.

* gnu/packages/java.scm (openjdk10)[source]: Apply patch.
 2023-03-20 19:00:02 +01:00
Andreas Enge ccb62d8feb
Merge remote-tracking branch 'origin/master' into core-updates 2023-03-20 18:49:06 +01:00
Mădălin Ionel Patrașcu 2336d5f57a
gnu: Add r-annotationhubdata. 
* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 40b79eafee
gnu: Add r-affylmgui. 
* gnu/packages/bioconductor.scm (r-affylmgui): New variable.
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 628c22ec9e
gnu: Add r-tkrplot. 
* gnu/packages/cran.scm (r-tkrplot): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 9f09ac6b21
gnu: Add r-affyplm. 
* gnu/packages/bioconductor.scm (r-affyplm): New variable.
 2023-03-20 18:25:10 +01:00
Mădălin Ionel Patrașcu 284b5eca60
gnu: Add r-affyilm. 
* gnu/packages/bioconductor.scm (r-affyilm): New variable.
 2023-03-20 18:25:10 +01:00
Efraim Flashner f80215c7c4
gnu: python-google-api-client: Update to 1.12.8. 
* gnu/packages/python-web.scm (python-google-api-client): Update to
1.12.8.
[arguments]: Remove custom phase to adjust setup.py.
[native-inputs]: Remove python-oauth2client, python-uritemplate. Move
python-httplib2, python-six ...
[propagated-inputs]: ... here. Add python-google-api-core-1,
python-google-auth-1, python-google-auth-httplib2, python-uritemplate-3.
 2023-03-20 18:27:45 +02:00
Efraim Flashner f541989f95
gnu: python-googleapis-common-protos: Update to 1.56.4. 
* gnu/packages/python-web.scm (python-googleapis-common-protos): Update
to 1.56.4.
[arguments]: Enable test suite.
 2023-03-20 18:27:44 +02:00
Efraim Flashner 86f1a3643e
gnu: Add python-google-api-core-1. 
* gnu/packages/python-web.scm (python-google-api-core-1): New variable.
 2023-03-20 18:27:44 +02:00
Efraim Flashner e0deaf0a85
gnu: Add python-google-auth-1. 
* gnu/packages/python-web.scm (python-google-auth-1): New variable.
 2023-03-20 18:27:44 +02:00
Efraim Flashner a39aac3352
gnu: Add python-google-auth-httplib2. 
* gnu/packages/python-web.scm (python-google-auth-httplib2): New
variable.
 2023-03-20 18:27:44 +02:00
Efraim Flashner 6ec585fb3e
gnu: Add python-uritemplate-3. 
* gnu/packages/python-web.scm (python-uritemplate-3): New variable.
 2023-03-20 18:27:43 +02:00
Efraim Flashner 0f4800e93a
gnu: python-httplib2: Update to 0.15.0. 
* gnu/packages/python-web.scm (python-httplib2): Update to 0.15.0.
[source]: Download using git.
[arguments]: Add a phase to adjust the test package version
requirements.
[native-inputs]: Add python-flake8, python-future, python-mock,
python-pytest, python-pytest-cov, python-pytest-forked,
python-pytest-randomly, python-pytest-timeout, python-pytest-xdist,
python-six.
[home-page]: Switch to new upstream homepage.
 2023-03-20 18:27:43 +02:00
Efraim Flashner 9d93c0c789
gnu: zig: Increase max-silent-time. 
* gnu/packages/zig.scm (zig-0.10)[properties]: Set max-silent-time to 3
hours.
 2023-03-20 18:27:40 +02:00
Ricardo Wurmus 5dcbe80da8
gnu: Add transanno. 
* gnu/packages/bioinformatics.scm (transanno): New variable.
 2023-03-20 17:22:33 +01:00
Ricardo Wurmus 6a1638fe97
gnu: Add rust-autocompress-0.2. 
* gnu/packages/crates-io.scm (rust-autocompress-0.2): New variable.
 2023-03-20 17:22:33 +01:00
Ricardo Wurmus cc2f5cd998
gnu: Add rust-temp-testdir-0.2. 
* gnu/packages/crates-io.scm (rust-temp-testdir-0.2): New variable.
 2023-03-20 17:22:33 +01:00
Ricardo Wurmus 50e63a675b
gnu: Add rust-bio-0.41. 
* gnu/packages/crates-io.scm (rust-bio-0.41): New variable.
 2023-03-20 17:22:33 +01:00
Andreas Enge 098bd280f8
gnu: procps: Fix test failure on i686. 
* gnu/packages/patches/procps-strtod-test.patch: New file.
* gnu/packages/linux.scm (procps): Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
 2023-03-20 16:59:27 +01:00
Andreas Enge f774aa2d17
gnu: procps: Update to 4.0.3. 
* gnu/packages/linux.scm (procps): Update to 4.0.3.
[native-inputs]: Add pkg-config.
 2023-03-20 16:34:09 +01:00
Maxim Cournoyer 45fd01ac5d
gnu: ruby-rugged: Update to 1.6.2-0.6379f23 and enable tests. 
* gnu/packages/ruby.scm (ruby-rugged): Update to 1.6.2-0.6379f23.
[source]: Fetch via git.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: Add git-minimal/pinned.  Remove ruby-minitest and ruby-pry.
 2023-03-20 11:12:18 -04:00
Maxim Cournoyer 008a2f1803
gnu: python-django-rq: Update to 2.7.0. 
* gnu/packages/django.scm (python-django-rq): Update to 2.7.0.
[arguments]: Replace django-admin.py with django-admin in check phase.
 2023-03-20 08:38:20 -04:00
Maxim Cournoyer 10d5535c78
gnu: python-aioredis: Deprecate by python-redis. 
* gnu/packages/databases.scm (python-aioredis): Mark as deprecated by
python-redis.
 2023-03-20 08:38:19 -04:00
Maxim Cournoyer c3b110b27a
gnu: python-fakeredis: Update to 2.10.1 and enable tests. 
* gnu/packages/databases.scm (python-fakeredis): Update to 2.10.1.
[source]: Fetch via git.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: New field.
[propagated-inputs]: Remove python-aioredis and python-packaging.
[home-page]: Update URL.
 2023-03-20 08:38:19 -04:00
Maxim Cournoyer 1a902eb21a
gnu: python-redis: Update to 4.5.2 and enable tests. 
* gnu/packages/databases.scm (python-redis): Update to 4.5.2.
[source]: Fetch from git.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests.  Add #:test-flags and #:phases.
[native-inputs]: Add field.
[propagated-inputs]: Add field.
[home-page]: Update URL.
 2023-03-20 08:38:07 -04:00
Maxim Cournoyer 20fa738123
gnu: python-hiredis: Update to 2.2.2 and enable tests. 
* gnu/packages/databases.scm (python-hiredis): Update to 2.2.2.
[source]: Fetch via git and apply patches.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests.  Add #:phases.
[native-inputs]: New field.
[inputs]: Likewise.
* gnu/packages/patches/python-hiredis-fix-header.patch: New file.
* gnu/packages/patches/python-hiredis-use-system-hiredis.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Register them.
 2023-03-20 08:32:32 -04:00
Maxim Cournoyer 9956638943
gnu: hiredis: Update to 1.1.0. 
* gnu/packages/databases.scm (hiredis): Update to 1.1.0.
 2023-03-20 08:32:32 -04:00
Maxim Cournoyer 4413b09fa3
gnu: redis: Use gexps and streamline. 
* gnu/packages/databases.scm (redis) [arguments]: Merge the use-correct-tclsh
into the patch-paths phase.  Use 'which' instead of assoc-ref.  Move
the #:make-flags argument before the #:phases one.  Use cc-for-target as the
value of the CC make flag.
[native-inputs]: Move field below arguments.
 2023-03-20 08:32:31 -04:00
Maxim Cournoyer 458b791f35
gnu: redis: Update to 7.0.9 [security fixes]. 
Fixes CVE-2023-25155, CVE-2022-36021 and more; see
https://raw.githubusercontent.com/redis/redis/7.0/00-RELEASENOTES.

* gnu/packages/databases.scm (redis): Update to 7.0.9.
[native-inputs]: Add pkg-config and which.
[arguments]: Add a patch-paths phase.  Skip the AOF-related tests.
[properties]: Add a lint-hidden-cve property.
 2023-03-20 08:32:31 -04:00
Andrew Tropin 3a2200e1ad
services: network-manager: Add missing shadowing of 'iwd?' field. 
* gnu/services/networking.scm (network-manager-shepherd-service): Add missing
shadowing of 'iwd?' field by using let* instead of let.
 2023-03-20 12:08:36 +04:00
Sergey Trofimov 1f36534c7e
home: 'home-environment-with-provenance' uses the HE location info. 
* gnu/home.scm (home-environment-with-provenance): Make `config-file`
optional, with the default taken from the HE location info.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-03-20 09:14:23 +04:00
conses d429ff12e5
gnu: emacs-eshell-syntax-highlighting: Update to 0.3-0.1ba39a9. 
* gnu/packages/emacs-xyz.scm (emacs-eshell-syntax-highlighting): Update to
0.3-0.1ba39a9.

Signed-off-by: Andrew Tropin <andrew@trop.in>
 2023-03-20 09:11:04 +04:00
Andrew Tropin 8f5f505d90
gnu: Add emacs-geiser-eros. 
* gnu/packages/emacs-xyz.scm (emacs-geiser-eros): New variable.
 2023-03-20 09:10:37 +04:00
Leo Famulari 80d31a7478
gnu: linux-libre: Update kernel configs for 6.2.7. 
* gnu/packages/aux-files/linux-libre/6.2-arm.conf,
gnu/packages/aux-files/linux-libre/6.2-arm64.conf,
gnu/packages/aux-files/linux-libre/6.2-i686.conf,
gnu/packages/aux-files/linux-libre/6.2-x86_64.conf: Set some new configuration
options.
 2023-03-19 18:01:00 -04:00
Leo Famulari 90c8f62328
gnu: linux-libre 4.14: Update to 4.14.310. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.310.
(linux-libre-4.14-pristine-source, deblob-scripts-4.14): Update hashes.
 2023-03-19 18:00:59 -04:00
Leo Famulari 5617381fc1
gnu: linux-libre 4.19: Update to 4.19.278. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.278.
(linux-libre-4.19-pristine-source, deblob-scripts-4.19): Update hashes.
 2023-03-19 18:00:59 -04:00
Leo Famulari fed3cf520e
gnu: linux-libre 5.4: Update to 5.4.237. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.237.
(linux-libre-5.4-pristine-source, deblob-scripts-5.4): Update hashes.
 2023-03-19 18:00:59 -04:00
Leo Famulari 400cb5cf58
gnu: linux-libre 5.10: Update to 5.10.175. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.175.
(linux-libre-5.10-pristine-source, deblob-scripts-5.10): Update hashes.
 2023-03-19 18:00:59 -04:00
Leo Famulari fccf2b2fb5
gnu: linux-libre 5.15: Update to 5.15.103. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.103.
(linux-libre-5.15-pristine-source, deblob-scripts-5.15): Update hashes.
 2023-03-19 18:00:58 -04:00
Leo Famulari d683261b23
gnu: linux-libre 6.1: Update to 6.1.20. 
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.20.
(linux-libre-6.1-pristine-source, deblob-scripts-6.1): Update hashes.
 2023-03-19 18:00:58 -04:00
Leo Famulari 0824203a22
gnu: linux-libre: Update to 6.2.7. 
* gnu/packages/linux.scm (linux-libre-6.2-version): Update to 6.2.7.
(linux-libre-6.2-pristine-source, deblob-scripts-6.2): Update hashes.
 2023-03-19 18:00:58 -04:00
Yovan Naumovski 65587224cd
gnu: atop: Update to 2.8.1. 
* gnu/packages/admin.scm (atop): Update to 2.8.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2023-03-19 16:55:52 -04:00
Ricardo Wurmus 896c2a0c45
gnu: r-flexmix: Update to 2.3-19. 
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-19.
 2023-03-19 21:01:39 +01:00
Ricardo Wurmus 83978be759
gnu: r-xml: Update to 3.99-0.14. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.14.
 2023-03-19 21:01:39 +01:00
Ricardo Wurmus 8cf778103e
gnu: r-blob: Update to 1.2.4. 
* gnu/packages/statistics.scm (r-blob): Update to 1.2.4.
 2023-03-19 21:01:39 +01:00
Ricardo Wurmus 4532e7f415
gnu: r-gtable: Update to 0.3.2. 
* gnu/packages/statistics.scm (r-gtable): Update to 0.3.2.
[propagated-inputs]: Add r-cli, r-glue, r-lifecycle, and r-rlang.
 2023-03-19 21:01:39 +01:00
Ricardo Wurmus 157733c8f2
gnu: r-commonmark: Update to 1.9.0. 
* gnu/packages/statistics.scm (r-commonmark): Update to 1.9.0.
 2023-03-19 21:01:39 +01:00
Ricardo Wurmus f4a0f04cc3
gnu: r-qpdf: Update to 1.3.2. 
* gnu/packages/cran.scm (r-qpdf): Update to 1.3.2.
 2023-03-19 21:01:39 +01:00
Ricardo Wurmus 4def53a3fc
gnu: r-mlr3: Update to 0.15.0. 
* gnu/packages/cran.scm (r-mlr3): Update to 0.15.0.
 2023-03-19 21:01:38 +01:00
Ricardo Wurmus bd266c08b8
gnu: r-paradox: Update to 0.11.1. 
* gnu/packages/cran.scm (r-paradox): Update to 0.11.1.
 2023-03-19 21:01:38 +01:00
Ricardo Wurmus cdc5dae016
gnu: r-anndata: Update to 0.7.5.6. 
* gnu/packages/cran.scm (r-anndata): Update to 0.7.5.6.
 2023-03-19 21:01:38 +01:00
Ricardo Wurmus f2a67431f9
gnu: r-wk: Update to 0.7.2. 
* gnu/packages/cran.scm (r-wk): Update to 0.7.2.
 2023-03-19 21:01:38 +01:00
Ricardo Wurmus 8ab5665bfd
gnu: r-insight: Update to 0.19.1. 
* gnu/packages/cran.scm (r-insight): Update to 0.19.1.
 2023-03-19 21:01:37 +01:00
Ricardo Wurmus 4f4817e0f0
gnu: r-learnr: Update to 0.11.3. 
* gnu/packages/cran.scm (r-learnr): Update to 0.11.3.
 2023-03-19 21:01:37 +01:00
Ricardo Wurmus f39d04ab93
gnu: r-renv: Update to 0.17.2. 
* gnu/packages/cran.scm (r-renv): Update to 0.17.2.
 2023-03-19 21:01:37 +01:00
Ricardo Wurmus aea6e0ac39
gnu: r-vctrs: Update to 0.6.0. 
* gnu/packages/cran.scm (r-vctrs): Update to 0.6.0.
 2023-03-19 21:01:37 +01:00
Ricardo Wurmus 911d141c0c
gnu: r-psych: Update to 2.3.3. 
* gnu/packages/cran.scm (r-psych): Update to 2.3.3.
 2023-03-19 21:01:37 +01:00
Ricardo Wurmus 12ea308ad9
gnu: r-rmpi: Update to 0.7-1. 
* gnu/packages/cran.scm (r-rmpi): Update to 0.7-1.
 2023-03-19 21:01:36 +01:00
Ricardo Wurmus bcb059801d
gnu: r-htmlwidgets: Update to 1.6.2. 
* gnu/packages/cran.scm (r-htmlwidgets): Update to 1.6.2.
 2023-03-19 21:01:36 +01:00
Ricardo Wurmus ac3c9b4344
gnu: r-servr: Update to 0.26. 
* gnu/packages/cran.scm (r-servr): Update to 0.26.
 2023-03-19 21:01:36 +01:00
Ricardo Wurmus 476f987f48
gnu: r-bestnormalize: Update to 1.9.0. 
* gnu/packages/cran.scm (r-bestnormalize): Update to 1.9.0.
[propagated-inputs]: Add r-generics.
 2023-03-19 21:01:30 +01:00
Ricardo Wurmus e9c8c01e24
gnu: r-desctools: Update to 0.99.48. 
* gnu/packages/statistics.scm (r-desctools): Update to 0.99.48.
[native-inputs]: Add r-r-rsp.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 675be97376
gnu: r-lubridate: Update to 1.9.2. 
* gnu/packages/statistics.scm (r-lubridate): Update to 1.9.2.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 7eb5c642d3
gnu: r-lme4: Update to 1.1-32. 
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-32.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus e2f20d9309
gnu: r-vgam: Update to 1.1-8. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-8.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 8a52db6989
gnu: r-hmisc: Update to 5.0-1. 
* gnu/packages/statistics.scm (r-hmisc): Update to 5.0-1.
[propagated-inputs]: Remove r-lattice, r-latticeextra, and r-survival; add r-colorspace,
r-knitr, and r-rmarkdown.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 843e4cc583
gnu: r-pkgmaker: Update to 0.32.8. 
* gnu/packages/statistics.scm (r-pkgmaker): Update to 0.32.8.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 3d4dd58647
gnu: r-rsqlite: Update to 2.3.0. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.0.
[propagated-inputs]: Remove r-rcpp; add r-cpp11.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 36c8d51d14
gnu: r-rcpparmadillo: Update to 0.12.0.1.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.12.0.1.0.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus d90503f84f
gnu: r-readr: Update to 2.1.4. 
* gnu/packages/statistics.scm (r-readr): Update to 2.1.4.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 4fbee041a9
gnu: r-httr: Update to 1.4.5. 
* gnu/packages/statistics.scm (r-httr): Update to 1.4.5.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus ceb2a75dda
gnu: r-openssl: Update to 2.0.6. 
* gnu/packages/statistics.scm (r-openssl): Update to 2.0.6.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 57f8e9fc3d
gnu: r-data-table: Update to 1.14.8. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.14.8.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 73fc67e13e
gnu: r-chron: Update to 2.3-60. 
* gnu/packages/statistics.scm (r-chron): Update to 2.3-60.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 8e17a0412b
gnu: r-formula: Update to 1.2-5. 
* gnu/packages/statistics.scm (r-formula): Update to 1.2-5.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus ded63ea3ab
gnu: r-dbplyr: Update to 2.3.1. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.3.1.
[propagated-inputs]: Remove r-assertthat; add r-tidyr.
 2023-03-19 16:11:58 +01:00
Ricardo Wurmus 62b1347bf9
gnu: r-tibble: Update to 3.2.0. 
* gnu/packages/statistics.scm (r-tibble): Update to 3.2.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 770c054345
gnu: r-rlang: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-rlang): Update to 1.1.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 6e29e15b25
gnu: r-testthat: Update to 3.1.7. 
* gnu/packages/statistics.scm (r-testthat): Update to 3.1.7.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 8a7eb44065
gnu: r-gdtools: Update to 0.3.2. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.3.2.
[inputs]: Remove zlib.
[propagated-inputs]: Add r-curl and r-fontquiver.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus b6776e8f57
gnu: r-ggplot2: Update to 3.4.1. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.4.1.
[propagated-inputs]: Remove r-digest.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus ce3909f5f2
gnu: r-survival: Update to 3.5-5. 
* gnu/packages/statistics.scm (r-survival): Update to 3.5-5.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 78e9d066c1
gnu: r-mgcv: Update to 1.8-42. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-42.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 9cc826ec3d
gnu: r-mass: Update to 7.3-58.3. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-58.3.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 9e47cdbe90
gnu: r-measurements: Update to 1.5.0. 
* gnu/packages/cran.scm (r-measurements): Update to 1.5.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus abc7774dc2
gnu: r-automap: Update to 1.1-1. 
* gnu/packages/cran.scm (r-automap): Update to 1.1-1.
[propagated-inputs]: Remove r-maptools; add r-sf and r-stars.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 8cad279fa0
gnu: r-webmockr: Update to 0.9.0. 
* gnu/packages/cran.scm (r-webmockr): Update to 0.9.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus ba6d2701bb
gnu: r-filehash: Update to 2.4-5. 
* gnu/packages/cran.scm (r-filehash): Update to 2.4-5.
[propagated-inputs]: Add r-digest.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 95c6686176
gnu: r-paws: Update to 0.2.0. 
* gnu/packages/cran.scm (r-paws): Update to 0.2.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 94d6fcc7e0
gnu: r-paws-database: Update to 0.2.0. 
* gnu/packages/cran.scm (r-paws-database): Update to 0.2.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus d261c7b39b
gnu: r-paws-common: Update to 0.5.6. 
* gnu/packages/cran.scm (r-paws-common): Update to 0.5.6.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 327a72a503
gnu: r-rgeos: Update to 0.6-2. 
* gnu/packages/cran.scm (r-rgeos): Update to 0.6-2.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus b9122f3dd9
gnu: r-btm: Update to 0.3.7. 
* gnu/packages/cran.scm (r-btm): Update to 0.3.7.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus a0038b0f37
gnu: r-mlr3tuning: Update to 0.18.0. 
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.18.0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 32cfd782ea
gnu: r-calculus: Update to 1.0.1. 
* gnu/packages/cran.scm (r-calculus): Update to 1.0.1.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 63fc234131
gnu: r-parsnip: Update to 1.0.4. 
* gnu/packages/cran.scm (r-parsnip): Update to 1.0.4.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus ccef849f84
gnu: r-workflows: Update to 1.1.3. 
* gnu/packages/cran.scm (r-workflows): Update to 1.1.3.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus b3cbbfedb8
gnu: r-igraph: Update to 1.4.1. 
* gnu/packages/cran.scm (r-igraph): Update to 1.4.1.
[native-inputs]: Add r-knitr.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus f44faf597c
gnu: r-rfast: Update to 2.0.7. 
* gnu/packages/cran.scm (r-rfast): Update to 2.0.7.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus efff0d4ccc
gnu: r-spatstat-random: Update to 3.1-4. 
* gnu/packages/cran.scm (r-spatstat-random): Update to 3.1-4.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 27ce0d8dda
gnu: r-spatstat-linnet: Update to 3.0-6. 
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.0-6.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus a006593f87
gnu: r-spatstat-geom: Update to 3.1-0. 
* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.1-0.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 5ab9bbaf9e
gnu: r-spatstat-data: Update to 3.0-1. 
* gnu/packages/cran.scm (r-spatstat-data): Update to 3.0-1.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus b1cb45a92e
gnu: r-spatstat-sparse: Update to 3.0-1. 
* gnu/packages/cran.scm (r-spatstat-sparse): Update to 3.0-1.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 88fd6a8cdf
gnu: r-spatstat-utils: Update to 3.0-2. 
* gnu/packages/cran.scm (r-spatstat-utils): Update to 3.0-2.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 01fb0c128f
gnu: r-spatstat-model: Update to 3.2-1. 
* gnu/packages/cran.scm (r-spatstat-model): Update to 3.2-1.
 2023-03-19 16:11:57 +01:00
Ricardo Wurmus 760ecb43ee
gnu: r-spatstat-explore: Update to 3.1-0. 
* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.1-0.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus b42e432e8b
gnu: r-conquer: Update to 1.3.3. 
* gnu/packages/cran.scm (r-conquer): Update to 1.3.3.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus dcd5c62a99
gnu: r-brms: Update to 2.19.0. 
* gnu/packages/cran.scm (r-brms): Update to 2.19.0.
[propagated-inputs]: Add r-rlang.
[native-inputs]: Add r-r-rsp.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 6ee4024334
gnu: r-posterior: Update to 1.4.1. 
* gnu/packages/cran.scm (r-posterior): Update to 1.4.1.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 541540eace
gnu: r-projpred: Update to 2.4.0. 
* gnu/packages/cran.scm (r-projpred): Update to 2.4.0.
[propagated-inputs]: Add r-abind, r-mclogit, r-nnet, r-ordinal, and r-ucminf.
[native-inputs]: Add r-rmarkdown.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus d8bda2d2c7
gnu: r-rstantools: Update to 2.3.0. 
* gnu/packages/cran.scm (r-rstantools): Update to 2.3.0.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 32acc4cc80
gnu: r-packrat: Update to 0.9.1. 
* gnu/packages/cran.scm (r-packrat): Update to 0.9.1.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus e943f613c1
gnu: r-butcher: Update to 0.3.2. 
* gnu/packages/cran.scm (r-butcher): Update to 0.3.2.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 0674832a61
gnu: r-forecast: Update to 8.21. 
* gnu/packages/cran.scm (r-forecast): Update to 8.21.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 0052b73ab4
gnu: r-anthropometry: Update to 1.19. 
* gnu/packages/cran.scm (r-anthropometry): Update to 1.19.
[propagated-inputs]: Remove r-depth; add r-ddalpha.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus b5f5452eff
gnu: r-tuner: Update to 1.4.3. 
* gnu/packages/cran.scm (r-tuner): Update to 1.4.3.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 73806cc7ac
gnu: r-reldist: Update to 1.7-2. 
* gnu/packages/cran.scm (r-reldist): Update to 1.7-2.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 619010805e
gnu: r-desolve: Update to 1.35. 
* gnu/packages/cran.scm (r-desolve): Update to 1.35.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus fba9954192
gnu: r-rgdal: Update to 1.6-5. 
* gnu/packages/cran.scm (r-rgdal): Update to 1.6-5.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus e9f1e6450e
gnu: r-terra: Update to 1.7-18. 
* gnu/packages/cran.scm (r-terra): Update to 1.7-18.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 96c4915d7c
gnu: r-rhpcblasctl: Update to 0.23-42. 
* gnu/packages/cran.scm (r-rhpcblasctl): Update to 0.23-42.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus c040a41dbd
gnu: r-dae: Update to 3.2.15. 
* gnu/packages/cran.scm (r-dae): Update to 3.2.15.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 75befe143f
gnu: r-styler: Update to 1.9.1. 
* gnu/packages/cran.scm (r-styler): Update to 1.9.1.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 1a89402c3c
gnu: r-sccore: Update to 1.0.3. 
* gnu/packages/cran.scm (r-sccore): Update to 1.0.3.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 136e97ead8
gnu: r-float: Update to 0.3-1. 
* gnu/packages/cran.scm (r-float): Update to 0.3-1.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus 3d9ebb293b
gnu: r-arrow: Update to 11.0.0.3. 
* gnu/packages/cran.scm (r-arrow): Update to 11.0.0.3.
[native-inputs]: Remove r-knitr.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus c3a3009862
gnu: apache-arrow: Update to 11.0.0. 
* gnu/packages/databases.scm (apache-arrow): Update to 11.0.0.
 2023-03-19 16:11:56 +01:00
Ricardo Wurmus aaa27f9fe0
gnu: r-aplot: Update to 0.1.10. 
* gnu/packages/cran.scm (r-aplot): Update to 0.1.10.
 2023-03-19 16:11:56 +01:00