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Author SHA1 Message Date
Ricardo Wurmus f29c9f0d33
gnu: r-shortread: Update to 1.44.0. 
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.44.0.
 2019-12-15 15:39:04 +01:00
Ricardo Wurmus 58fd68b299
gnu: r-systempiper: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.20.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus f8f815667d
gnu: r-grohmm: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.20.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus 74d59b6748
gnu: r-biocviews: Update to 1.54.0. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.54.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus ef96154433
gnu: r-biocstyle: Update to 2.14.2. 
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.14.2.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus 7758d5205c
gnu: r-bioccheck: Update to 1.22.0. 
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.22.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus d37daf8929
gnu: r-s4vectors: Update to 0.24.1. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.24.1.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus d2723484f6
gnu: r-iranges: Update to 2.20.1. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.20.1.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus 937f3a46eb
gnu: r-genomeinfodb: Update to 1.22.0. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.22.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus da03fa3c90
gnu: r-edger: Update to 3.28.0. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.28.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus 8f5d2c3abc
gnu: r-variantannotation: Update to 1.32.0. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.32.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus eea491e5c6
gnu: r-limma: Update to 3.42.0. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.42.0.
 2019-12-15 15:39:03 +01:00
Ricardo Wurmus da6edb199d
gnu: r-xvector: Update to 0.26.0. 
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.26.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 0202b13e8b
gnu: r-genomicranges: Update to 1.38.0. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.38.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 8d1c3666d7
gnu: r-biobase: Update to 2.46.0. 
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.46.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus de9ae3e7b1
gnu: r-annotationdbi: Update to 1.48.0. 
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.48.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 68a9d9f26a
gnu: r-biomart: Update to 2.42.0. 
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.42.0.
[propagated-inputs]: Add r-biocfilecache, r-openssl, and r-rappdirs; remove
r-rcurl.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 5854a4a265
gnu: r-biocparallel: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.20.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 15cd3f6ef5
gnu: r-biostrings: Update to 2.54.0. 
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.54.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus e1d681e2af
gnu: r-rsamtools: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.2.1.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 4ada4fb745
gnu: r-delayedarray: Update to 0.12.0. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.12.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 264db038c6
gnu: r-summarizedexperiment: Update to 1.16.0. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.16.0.
 2019-12-15 15:39:02 +01:00
Ricardo Wurmus 55e515d206
gnu: r-genomicalignments: Update to 1.22.1. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.22.1.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 15187da9e7
gnu: r-rtracklayer: Update to 1.46.0. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.46.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 9fec340391
gnu: r-genomicfeatures: Update to 1.38.0. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.38.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 323f42b2ca
gnu: r-topgo: Update to 2.37.0. 
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.37.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus e3a2b96c80
gnu: r-bsgenome: Update to 1.54.0. 
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.54.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus bca1c45e4e
gnu: r-impute: Update to 1.60.0. 
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.60.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus b590742362
gnu: r-seqpattern: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.18.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus e06b34e8c6
gnu: r-genomation: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.18.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus a9790190d1
gnu: r-seqlogo: Update to 1.52.0. 
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.52.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus a5f9b30338
gnu: r-motifrg: Update to 1.30.0. 
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.30.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 2f15045400
gnu: r-zlibbioc: Update to 1.32.0. 
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.32.0.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 108c03a8eb
gnu: r-rhtslib: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.18.0.
[propagated-inputs]: Add curl.
 2019-12-15 15:39:01 +01:00
Ricardo Wurmus 7b6c008960
gnu: r-bamsignals: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.18.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus f375d74072
gnu: r-rcas: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.12.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 3964f2c24e
gnu: r-mutationalpatterns: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.12.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 3a0229eba0
gnu: r-tximport: Update to 1.14.0. 
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.14.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 126539d1ae
gnu: r-rhdf5: Update to 2.30.1. 
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.30.1.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 4e5c217684
gnu: r-pcamethods: Update to 1.78.0. 
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.78.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 589939937d
gnu: r-msnbase: Update to 2.12.0. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.12.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 597aeb8a34
gnu: r-msnid: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.20.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 3ccf1e3c20
gnu: r-aroma-light: Update to 3.16.0. 
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.16.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 783bbe3ace
gnu: r-deseq: Update to 1.38.0. 
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.38.0.
 2019-12-15 15:39:00 +01:00
Ricardo Wurmus 0a6704e226
gnu: r-edaseq: Update to 2.20.0. 
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.20.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 2beffcb558
gnu: r-interactivedisplaybase: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.24.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 6339ea22f1
gnu: r-annotationhub: Update to 2.18.0. 
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.18.0.
[propagated-inputs]: Add r-biocversion.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus c21bf901e2
gnu: r-fastseg: Update to 1.32.0. 
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.32.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus fedba48bb5
gnu: r-keggrest: Update to 1.26.1. 
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.26.1.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus b342b20a24
gnu: r-gage: Update to 2.36.0. 
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.36.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 48c7ee93b7
gnu: r-genomicfiles: Update to 1.22.0. 
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.22.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus dac706c322
gnu: r-complexheatmap: Update to 2.2.0. 
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.2.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 2edb116c1c
gnu: r-dirichletmultinomial: Update to 1.28.0. 
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.28.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus e107f3df54
gnu: r-ensembldb: Update to 2.10.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.10.2.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus e89032667d
gnu: r-organismdbi: Update to 1.28.0. 
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.28.0.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 866810e686
gnu: r-biovizbase: Update to 1.34.1. 
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.34.1.
 2019-12-15 15:38:59 +01:00
Ricardo Wurmus 81600df302
gnu: r-ggbio: Update to 1.34.0. 
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.34.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 89a41696ab
gnu: r-gqtlbase: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.18.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 67d4fd523d
gnu: r-erma: Update to 1.2.0. 
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.2.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 14eb0978a8
gnu: r-snpstats: Update to 1.36.0. 
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.36.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 6fff104191
gnu: r-ldblock: Update to 1.16.0. 
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.16.0.
[propagated-inputs]: Remove r-go-db and r-homo-sapiens.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus cfa93a30b4
gnu: r-gqtlstats: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.18.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus d57b6b4bae
gnu: r-gviz: Update to 1.30.0. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.30.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 2e13f10e89
gnu: r-sushi: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.24.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 28329991b0
gnu: r-gwascat: Update to 2.18.0. 
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.18.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 0a16021241
gnu: r-hitc: Update to 1.30.0. 
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.30.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 8db2915900
gnu: r-fithic: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.12.0.
 2019-12-15 15:38:58 +01:00
Ricardo Wurmus 7557bd0cce
gnu: r-hdf5array: Update to 1.14.1. 
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.14.1.
[propagated-inputs]: Add r-matrix.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 1f5d262cfd
gnu: r-rhdf5lib: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.8.0.
[arguments]: Update patches.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 8804e4b48e
gnu: r-beachmat: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.2.1.
[propagated-inputs]: Add r-matrix.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 376f2f35b6
gnu: r-singlecellexperiment: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.8.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus bf23416fe1
gnu: r-scater: Update to 1.14.5. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.14.5.
[propagated-inputs]: Remove r-dplyr.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 964634fa44
gnu: r-scran: Update to 1.14.5. 
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.14.5.
[propagated-inputs]: Remove r-dynamictreecut.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus c81ccd3076
gnu: r-delayedmatrixstats: Update to 1.8.0. 
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.8.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 758dfc61ee
gnu: r-mzid: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.24.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus dc9d4832b9
gnu: r-vsn: Update to 3.54.0. 
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.54.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus af87ac3aa7
gnu: r-annotationfilter: Update to 1.10.0. 
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.10.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 43058ca656
gnu: r-chipseq: Update to 1.36.0. 
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.36.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 746e1f062e
gnu: r-copywriter: Update to 2.18.0. 
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.18.0.
 2019-12-15 15:38:57 +01:00
Ricardo Wurmus 32f6059635
gnu: r-affy: Update to 1.64.0. 
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.64.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 51ca216bdf
gnu: r-affyio: Update to 1.56.0. 
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.56.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 065c305ca5
gnu: r-methylkit: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.12.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 2a6ce98b17
gnu: r-sva: Update to 3.34.0. 
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.34.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus d12328f9fe
gnu: r-protgenerics: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.18.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 3381dc4b5c
gnu: r-mzr: Update to 2.20.0. 
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.20.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 418d72142c
gnu: r-illuminaio: Update to 0.28.0. 
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.28.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus db85744ef3
gnu: r-geoquery: Update to 2.54.1. 
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.54.1.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 048a43d6a5
gnu: r-scone: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-scone): Update to 1.10.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 2f223b2115
gnu: r-scdd: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.10.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 81a125cdb6
gnu: r-noiseq: Update to 2.30.0. 
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.30.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus 9732e690a5
gnu: r-monocle: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.14.0.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus dc5237f85e
gnu: r-mast: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-mast): Update to 1.12.0.
[propagated-inputs]: Remove r-blme.
 2019-12-15 15:38:56 +01:00
Ricardo Wurmus a5cc1f104b
gnu: r-icobra: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.14.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 0383bd05ce
gnu: r-ihw: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.14.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 153dc51bfe
gnu: r-lpsymphony: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.14.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus a9649c4138
gnu: r-ebseq: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.26.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 96030bf718
gnu: r-deds: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-deds): Update to 1.60.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus bba70cda0a
gnu: r-dnacopy: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.60.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus eb3fd3825c
gnu: r-copynumber: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.26.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 84825e5523
gnu: r-chipexoqual: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.10.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 2e17cbd733
gnu: r-savr: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-savr): Update to 1.24.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus c88448d4b8
gnu: r-biocsingular: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.2.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 12e2aa96dc
gnu: r-biocneighbors: Update to 1.4.1. 
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.4.1.
[propagated-inputs]: Remove r-biocgenerics; add r-matrix.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus efd0934733
gnu: r-ruvseq: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.20.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 2d86dc2062
gnu: r-dnabarcodes: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.16.0.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 74bb4cdf57
gnu: r-inspect: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.16.0.
[propagated-inputs]: Remove r-preprocesscore; add r-genomeinfodb and r-kernsmooth.
 2019-12-15 15:38:55 +01:00
Ricardo Wurmus 565bb84b31
gnu: r-plgem: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.58.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 9c071144a8
gnu: r-rots: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-rots): Update to 1.14.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 728571fbc6
gnu: r-glimma: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.14.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus ab7f3cbbeb
gnu: r-goseq: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.38.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus b2b5b03115
gnu: r-ctc: Update to 1.60.0. 
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.60.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus b701ed6e83
gnu: r-genomicinteractions: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.20.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus bb841742dd
gnu: r-interactionset: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.14.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 595b6c9a89
gnu: r-riboseqr: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.20.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 88af7049ea
gnu: r-riboprofiling: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.16.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus b0897fbf95
gnu: r-chipcomp: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.16.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus d77228232d
gnu: r-bayseq: Update to 2.20.0. 
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.20.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 23ce5ad1d6
gnu: r-qdnaseq: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.22.0.
[propagated-inputs]: Remove r-biocparallel; add r-future and r-future-apply.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 8f2a4ea18b
gnu: r-cghcall: Update to 2.48.0. 
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.48.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus 8341f7062e
gnu: r-cghbase: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.46.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus b6c2f098ba
gnu: r-marray: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-marray): Update to 1.64.0.
 2019-12-15 15:38:54 +01:00
Ricardo Wurmus cf8968d7e6
gnu: r-chippeakanno: Update to 3.20.0. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.20.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 70eb483a28
gnu: r-graph: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-graph): Update to 1.64.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 16d49c2a7c
gnu: r-multtest: Update to 2.42.0. 
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.42.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus ba74434fc4
gnu: r-ripseeker: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.26.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 73883f0f14
gnu: r-diffbind: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.14.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus bcf711b58b
gnu: r-qvalue: Update to 2.18.0. 
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.18.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 084c651cbf
gnu: r-oligo: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.50.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 79820b9fe9
gnu: r-oligoclasses: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.48.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 7778e91a2d
gnu: r-geneplotter: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.64.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 7ccbaf1b6e
gnu: r-reportingtools: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.26.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 2e73ea955b
gnu: r-regioner: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.18.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus ddd3673928
gnu: r-hpar: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.28.0.
 2019-12-15 15:38:53 +01:00
Ricardo Wurmus 7a111924ee
gnu: r-annotate: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.64.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus ce5162d09d
gnu: r-affxparser: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.58.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 1693534f76
gnu: r-affycoretools: Update to 1.58.2. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.2.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus f561421d04
gnu: r-affycontam: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.44.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus c2fa63e905
gnu: r-affycompatible: Update to 1.46.0. 
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.46.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 5d87f12615
gnu: r-affycomp: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.62.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus be5e4e9615
gnu: r-biocgenerics: Update to 0.32.0. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.32.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 2c8433ca0a
gnu: r-depecher: Update to 1.2.0. 
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.0.
[arguments]: Remove field.
[propagated-inputs]: Remove r-biocparallel; add r-fnn and r-robustbase.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 7a62d5e0c2
gnu: Add r-cytoml. 
* gnu/packages/bioconductor.scm (r-cytoml): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 6aedc80514
gnu: Add r-opencyto. 
* gnu/packages/bioconductor.scm (r-opencyto): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus b700b9ec21
gnu: Add r-flowstats. 
* gnu/packages/bioconductor.scm (r-flowstats): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 82c1111745
gnu: Add r-flowworkspace. 
* gnu/packages/bioconductor.scm (r-flowworkspace): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus f1964519e7
gnu: Add r-rprotobuflib. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus c8ab9eb1b4
gnu: Add r-flowclust. 
* gnu/packages/bioconductor.scm (r-flowclust): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 0dd4b7d732
gnu: Add r-flowviz. 
* gnu/packages/bioconductor.scm (r-flowviz): New variable.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus dbfce8ff5b
gnu: r-rgraphviz: Update to 2.30.0. 
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.30.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 9d1099eb07
gnu: r-preprocesscore: Update to 1.48.0. 
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.48.0.
 2019-12-15 15:38:52 +01:00
Ricardo Wurmus 257b3b812c
gnu: Add r-knn-covertree. 
* gnu/packages/cran.scm (r-knn-covertree): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus 5aa7e882fa
gnu: Add r-ggplot-multistats. 
* gnu/packages/cran.scm (r-ggplot-multistats): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus f5f440312d
gnu: Add r-ggcyto. 
* gnu/packages/bioconductor.scm (r-ggcyto): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus 15ac0c195c
gnu: Add r-ncdfflow. 
* gnu/packages/bioconductor.scm (r-ncdfflow): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus b4aee31dcb
gnu: Add r-cytolib. 
* gnu/packages/bioconductor.scm (r-cytolib): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus b4a22ccaaa
gnu: Add r-multidataset. 
* gnu/packages/bioconductor.scm (r-multidataset): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus e5d722fb4c
gnu: Add r-biocversion. 
* gnu/packages/bioconductor.scm (r-biocversion): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus eb15df8dea
gnu: Add r-qqman. 
* gnu/packages/cran.scm (r-qqman): New variable.
 2019-12-15 15:38:51 +01:00
Ricardo Wurmus b5b6e74e15
gnu: Add r-idpmisc. 
* gnu/packages/cran.scm (r-idpmisc): New variable.
 2019-12-15 15:38:51 +01:00
Björn Höfling 58c3a4f596
gnu: java-svg-salamander: Return #t from snippet. 
* gnu/packages/java.scm (java-svg-salamander)[origin]:
Return #t from snippet.
 2019-12-15 12:31:35 +01:00
Brett Gilio 4fb8e2744a
gnu: emacs-cider: Update home-page. 
* gnu/packages/emacs-xyz.scm (emacs-cider)[home-page]: Change to https://cider.mx/.
 2019-12-14 18:46:06 -06:00
Brett Gilio 7d4d881266
gnu: emacs-cider: Update to 0.23.0. 
* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 0.23.0.
[propagated-inputs]: Add emacs-seq, emacs-parseedn.
 2019-12-14 18:45:22 -06:00
Brett Gilio 47a9a59270
gnu: Add emacs-parseedn. 
* gnu/packages/emacs-xyz.scm (emacs-parseedn): New variable.
 2019-12-14 18:44:50 -06:00
Brett Gilio 586e1611b9
gnu: Add emacs-parseclj. 
* gnu/packages/emacs-xyz.scm (emacs-parseclj): New variable.
 2019-12-14 18:44:25 -06:00
Konrad Hinsen 4ac5d4fee1
gnu: Add gfortran-toolchain 
* gnu/packages/commencement.scm: (gfortran-toolchain): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-15 00:34:05 +01:00
Ludovic Courtès 178e550034
gnu: bootloaders: Avoid #:select on (gnu packages …) module. 
* gnu/packages/bootloaders.scm: Remove use of #:select.
 2019-12-15 00:34:05 +01:00
Brett Gilio 9d97a11f04
gnu: emacs-telega: Update to 0.5.3-1. 
* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.3-1.
[version]: Correct the version number used in the package elisp code itself.
 2019-12-14 14:07:22 -06:00
Alex Griffin d900e1f675
gnu: Add htmlcxx. 
* gnu/packages/web.scm (htmlcxx): New variable.
 2019-12-14 13:22:54 -06:00
Brett Gilio e9d8dee6c3
gnu: emacs-doom-themes: Update to 2.1.6-2. 
* gnu/packages/emacs-xyz.scm (emacs-doom-themes): Update to 2.1.6-2.
[arguments]: Disable byte-compilation regarding issue in upstream.
<https://github.com/hlissner/emacs-doom-themes/issues/314>.
 2019-12-14 13:06:07 -06:00
Julien Lepiller 5c1bd7b8d1
gnu: josm: Update to 15553. 
* gnu/packages/geo.scm (josm): Update to 15553.
 2019-12-14 17:43:17 +01:00
Mathieu Othacehe db78fc0679
gnu: bootloaders: Fix make-u-boot-sunxi64-package cross-compilation. 
* gnu/packages/bootloaders.scm (make-u-boot-sunxi64-package)[arguments]:
Search in native-inputs to fix cross-compilation.
 2019-12-14 17:41:10 +01:00
Mathieu Othacehe af58b275c9
gnu: Add u-boot-pine64-lts. 
* gnu/packages/bootloaders.scm (u-boot-pine64-lts): New variable.
 2019-12-14 17:41:09 +01:00
Ricardo Wurmus 5c0b5b8ad7
gnu: Add r-adamethods. 
* gnu/packages/cran.scm (r-adamethods): New variable.
 2019-12-14 13:35:58 +01:00
Ricardo Wurmus c67508079d
gnu: Add r-anthropometry. 
* gnu/packages/cran.scm (r-anthropometry): New variable.
 2019-12-14 13:35:58 +01:00
Ricardo Wurmus c71724653a
gnu: Add r-shapes. 
* gnu/packages/cran.scm (r-shapes): New variable.
 2019-12-14 13:35:58 +01:00
Ricardo Wurmus ccc2c19b02
gnu: Add r-archetypes. 
* gnu/packages/cran.scm (r-archetypes): New variable.
 2019-12-14 13:35:58 +01:00
Ricardo Wurmus 9fd2d4fdb1
gnu: Add r-depth. 
* gnu/packages/cran.scm (r-depth): New variable.
 2019-12-14 13:35:58 +01:00
Ricardo Wurmus 9cd3ae8620
gnu: Add r-icge. 
* gnu/packages/cran.scm (r-icge): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 86a760cc67
gnu: Add r-biclust. 
* gnu/packages/cran.scm (r-biclust): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 9906cb80de
gnu: Add r-flexclust. 
* gnu/packages/cran.scm (r-flexclust): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 94ecf71344
gnu: Add r-additivitytests. 
* gnu/packages/cran.scm (r-additivitytests): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 5458490ebb
gnu: Add r-tolerance. 
* gnu/packages/cran.scm (r-tolerance): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 09e9ad334a
gnu: Add r-univoutl. 
* gnu/packages/cran.scm (r-univoutl): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 0b13a75716
gnu: Add r-adagio. 
* gnu/packages/cran.scm (r-adagio): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 2a1fd51864
gnu: Add r-adabag. 
* gnu/packages/cran.scm (r-adabag): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 154555e42f
gnu: Add r-acuityview. 
* gnu/packages/cran.scm (r-acuityview): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 5e2ad37684
gnu: Add r-imager. 
* gnu/packages/cran.scm (r-imager): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 7dd1fbf9ee
gnu: Add r-readbitmap. 
* gnu/packages/cran.scm (r-readbitmap): New variable.
 2019-12-14 13:35:57 +01:00
Ricardo Wurmus 6968aa2fe7
gnu: Add r-bmp. 
* gnu/packages/cran.scm (r-bmp): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 7faa05377e
gnu: Add r-actuar. 
* gnu/packages/cran.scm (r-actuar): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 1830e0383b
gnu: Add r-expint. 
* gnu/packages/cran.scm (r-expint): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 5f08fa64f0
gnu: Add r-actogrammr. 
* gnu/packages/cran.scm (r-actogrammr): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus a5d4dc7efb
gnu: Add r-activpalprocessing. 
* gnu/packages/cran.scm (r-activpalprocessing): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus bbaab25396
gnu: Add r-activpal. 
* gnu/packages/cran.scm (r-activpal): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 6f94a3e5f5
gnu: Add r-activityindex. 
* gnu/packages/cran.scm (r-activityindex): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 89d4f154b9
gnu: Add r-activitycounts. 
* gnu/packages/cran.scm (r-activitycounts): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 7f960d81fb
gnu: Add r-activedriver. 
* gnu/packages/cran.scm (r-activedriver): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 402dae07b5
gnu: Add r-actigraphy. 
* gnu/packages/cran.scm (r-actigraphy): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 77a5bf938f
gnu: Add r-fda. 
* gnu/packages/cran.scm (r-fda): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus c090b9977c
gnu: Add r-actfrag. 
* gnu/packages/cran.scm (r-actfrag): New variable.
 2019-12-14 13:35:56 +01:00
Ricardo Wurmus 6790adf338
gnu: Add r-ineq. 
* gnu/packages/cran.scm (r-ineq): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus d024207e7b
gnu: Add r-actcd. 
* gnu/packages/cran.scm (r-actcd): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 70c0dbe73f
gnu: Add r-gdina. 
* gnu/packages/cran.scm (r-gdina): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 6f0a5ab098
gnu: Add r-alabama. 
* gnu/packages/cran.scm (r-alabama): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus ffecbcbf51
gnu: Add r-acswr. 
* gnu/packages/cran.scm (r-acswr): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 0ea0b2dd46
gnu: Add r-acss. 
* gnu/packages/cran.scm (r-acss): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 07d958fe0e
gnu: Add r-acss-data. 
* gnu/packages/cran.scm (r-acss-data): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 49e9a9aea2
gnu: Add r-acs. 
* gnu/packages/cran.scm (r-acs): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus d015db6f57
gnu: Add r-acrt. 
* gnu/packages/cran.scm (r-acrt): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 4b44bfb6ec
gnu: Add r-acrosstic. 
* gnu/packages/cran.scm (r-acrosstic): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus c3f5989c8f
gnu: Add r-treeclust. 
* gnu/packages/cran.scm (r-treeclust): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 3bc2c21043
gnu: Add r-acrm. 
* gnu/packages/cran.scm (r-acrm): New variable.
 2019-12-14 13:35:55 +01:00
Ricardo Wurmus 6c2dcba99d
gnu: Add r-dummies. 
* gnu/packages/cran.scm (r-dummies): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 6afc037e74
gnu: Add r-kernelfactory. 
* gnu/packages/cran.scm (r-kernelfactory): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 270529f633
gnu: Add r-genalg. 
* gnu/packages/cran.scm (r-genalg): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus f18c0544f6
gnu: Add r-ada. 
* gnu/packages/cran.scm (r-ada): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 56cba940c3
gnu: Add r-acp. 
* gnu/packages/cran.scm (r-acp): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus c12227d971
gnu: Add r-acousticndlcoder. 
* gnu/packages/cran.scm (r-acousticndlcoder): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 19172e12ef
gnu: Add r-seewave. 
* gnu/packages/cran.scm (r-seewave): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus cb350053da
gnu: Add r-tuner. 
* gnu/packages/cran.scm (r-tuner): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 5d887a0355
gnu: Add r-acopula. 
* gnu/packages/cran.scm (r-acopula): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus eff3e8a471
gnu: Add r-acnr. 
* gnu/packages/cran.scm (r-acnr): New variable.
 2019-12-14 13:35:54 +01:00
Ricardo Wurmus 217cd2e3ee
gnu: Add r-r-devices. 
* gnu/packages/cran.scm (r-r-devices): New variable.
 2019-12-14 13:35:53 +01:00
Ricardo Wurmus 2fe1e66c4d
gnu: Add r-r-filesets. 
* gnu/packages/cran.scm (r-r-filesets): New variable.
 2019-12-14 13:35:53 +01:00
Ricardo Wurmus 8e6f63dd83
gnu: Add r-activepathways. 
* gnu/packages/bioconductor.scm (r-activepathways): New variable.
 2019-12-14 13:35:53 +01:00
Mark H Weaver 3e9e242aa5
gnu: linux-libre: Update to 5.3.16. 
* gnu/packages/linux.scm (linux-libre-5.3-version): Update to 5.3.16.
(linux-libre-5.3-pristine-source): Update hash.
 2019-12-13 23:09:39 -05:00
Mark H Weaver 4e410c9d23
gnu: linux-libre@4.19: Update to 4.19.89. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.89.
(linux-libre-4.19-pristine-source): Update hash.
 2019-12-13 23:08:25 -05:00
Ricardo Wurmus 9f9520a129
gnu: bluez-alsa: Update to 2.0.0. 
* gnu/packages/audio.scm (bluez-alsa): Update to 2.0.0.
[source]: Use git-file-name.
[arguments]: Override ALSA plugin directory and dbus configuration directory.
[inputs]: Add dbus.
 2019-12-13 22:53:19 +01:00
Ricardo Wurmus 1c2e3d7d31
gnu: Add r-r-huge. 
* gnu/packages/cran.scm (r-r-huge): New variable.
 2019-12-13 22:41:41 +01:00
Ricardo Wurmus 2dc8723abd
gnu: Add r-acmer. 
* gnu/packages/cran.scm (r-acmer): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 73f055df34
gnu: Add r-acmeeqtl. 
* gnu/packages/cran.scm (r-acmeeqtl): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus fa82997fea
gnu: Add r-filematrix. 
* gnu/packages/cran.scm (r-filematrix): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 542590c5a3
gnu: Add r-acm4r. 
* gnu/packages/cran.scm (r-acm4r): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 220557a7f3
gnu: Add r-acid. 
* gnu/packages/cran.scm (r-acid): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 6cc356c353
gnu: Add r-gamlss. 
* gnu/packages/cran.scm (r-gamlss): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 3b89a8af7a
gnu: Add r-gamlss-data. 
* gnu/packages/cran.scm (r-gamlss-data): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus a8a7ba9acb
gnu: Add r-acfmperiod. 
* gnu/packages/cran.scm (r-acfmperiod): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 43a70edc29
gnu: Add r-acet. 
* gnu/packages/cran.scm (r-acet): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 1442ca7340
gnu: Add r-acebayes. 
* gnu/packages/cran.scm (r-acebayes): New variable.
 2019-12-13 22:41:40 +01:00
Ricardo Wurmus 390bc8726b
gnu: Add r-lhs. 
* gnu/packages/cran.scm (r-lhs): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus e6bf147293
gnu: Add r-randtoolbox. 
* gnu/packages/cran.scm (r-randtoolbox): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus ca1bc50cad
gnu: Add r-rngwell. 
* gnu/packages/cran.scm (r-rngwell): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus b441dac7af
gnu: Add r-ace2fastq. 
* gnu/packages/cran.scm (r-ace2fastq): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus b8d52fe277
gnu: Add r-accsda. 
* gnu/packages/cran.scm (r-accsda): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus 7199d2a5fc
gnu: Add r-sparselda. 
* gnu/packages/cran.scm (r-sparselda): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus c909b710a4
gnu: Add r-elasticnet. 
* gnu/packages/cran.scm (r-elasticnet): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus 7e2e46cbe2
gnu: Add r-mda. 
* gnu/packages/cran.scm (r-mda): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus 592d423ca5
gnu: Add r-accrued. 
* gnu/packages/cran.scm (r-accrued): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus c5b86d3a18
gnu: Add r-accrual. 
* gnu/packages/cran.scm (r-accrual): New variable.
 2019-12-13 22:41:39 +01:00
Ricardo Wurmus f9d9c83183
gnu: Add r-tcltk2. 
* gnu/packages/cran.scm (r-tcltk2): New variable.
 2019-12-13 22:41:38 +01:00