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Author SHA1 Message Date
Ludovic Courtès
94fea21b21
gnu: hdf5@1.10: Update to 1.10.5. 
* gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.5.  Remove
"hdf5-mpi-deprecations.patch".
* gnu/packages/patches/hdf5-mpi-deprecations.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-12-13 18:04:04 +01:00
Brett Gilio
94c7f70faa
Merge branch 'master' into staging 2019-12-13 07:58:30 -06:00
Efraim Flashner
c9e676d0b1
Merge remote-tracking branch 'origin/master' into core-updates 2019-12-12 04:10:59 +02:00
Tobias Geerinckx-Rice
79a3925355
gnu: libnftnl: Update to 1.1.5. 
* gnu/packages/linux.scm (libnftnl): Update to 1.1.5.
[source]: Add patch.
* gnu/packages/patches/libnftnl-dont-check-NFTNL_FLOWTABLE_SIZE.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-12-12 03:02:31 +01:00
Marius Bakke
eccd2c14d6
gnu: pcre2: Update to 10.34. 
* gnu/packages/patches/pcre2-fix-jit_match-crash.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/pcre.scm (pcre2): Update to 10.34.
[source](patches): Remove.
 2019-12-11 23:21:55 +01:00
Marius Bakke
f8a8984c4b
gnu: nss: Remove replacement package. 
The merge preceding this commit ignored the 'replacement' added to nss in
commit 04b33ce205, because the security fix is
already present in NSS 3.48.  This commit removes the remaining bits.

* gnu/packages/patches/nss-CVE-2019-11745.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/nss.scm (nss/fixed): Remove variable.
 2019-12-11 23:21:55 +01:00
Marius Bakke
9b601fc211
Merge branch 'master' into staging 2019-12-11 23:21:27 +01:00
Mark H Weaver
04b33ce205
gnu: nss: Fix CVE-2019-11745 via graft. 
* gnu/packages/patches/nss-CVE-2019-11745.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/nss.scm (nss/fixed): New variable.
(nss)[replacement]: Add field.
 2019-12-11 01:52:10 -05:00
Marius Bakke
99732a8f22
gnu: orc: Update to 0.4.31. 
* gnu/packages/patches/orc-typedef-enum.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gstreamer.scm (orc): Update to 0.4.31.
[source](patches): Remove.
 2019-12-11 01:14:37 +01:00
Marius Bakke
91304b7945
gnu: mesa: Update to 19.2.7. 
* gnu/packages/patches/mesa-timespec-test-32bit.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gl.scm (mesa): Update to 19.2.7.
[source](patches): Remove obsolete.
 2019-12-11 01:14:36 +01:00
Ludovic Courtès
4bd6f1d1d6
gnu: guile: Add 2.2.6-1 with a finalization crash bug-fix. 
* gnu/packages/patches/guile-finalization-crash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-2.2/bug-fix): New variable.
 2019-12-09 18:32:05 +01:00
Guillaume Le Vaillant
4427417bd7
gnu: websocketpp: Add patch for Boost >= 1.70. 
* gnu/packages/patches/websocket-fix-for-boost-1.70.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/web.scm (websocketpp): Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-09 18:32:04 +01:00
Evan Straw
9beec2173f
gnu: stumpwm: Remove obsolete patch. 
* gnu/local.mk (stumpwm-fix-broken-read-one-line.patch): Remove obsolete.

Co-authored-by: Brett Gilio <brettg@posteo.net>
Signed-off-by: Brett Gilio <brettg@posteo.net>
 2019-12-08 21:26:21 -06:00
Björn Höfling
7fa83fa860
gnu: ruby-safe-yaml: Update to 1.0.5. 
* gnu/packages/ruby.scm(ruby-save-yaml): Update to 1.0.5.
* gnu/packages/patches/ruby-safe-yaml-add-require-time.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-12-09 00:35:42 +01:00
Andrew Miloradovsky
327bfe8db9
gnu: glusterfs: Update to 7.0 
* gnu/packages/file-systems.scm (glusterfs): Update to 7.0.
[source]: Update URL.
[arguments]: Add "PYTHON=" and"--enable-cmocka" configure flags.
Remove 'replace-config.sub and 'fix-lex phases.  Add 'autogen.
[native-inputs]: Add libtirpc, rpcsvc-proto, autoconf, automake, and
libtool.
[inputs]: Add fuse, libaio, and rdma-core.  Remove lvm2 and sqlite.
* gnu/packages/patches/glusterfs-use-PATH-instead-of-hardcodes.patch:
Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2019-12-08 00:47:26 +01:00
Kei Kebreau
05b29d8494
gnu: python-pyatspi: Update to 2.32.1. 
* gnu/packages/gnome.scm (python-pyatspi): Update to 2.32.1.
[source]: Remove patch.
* gnu/packages/patches/python-pyatspi-python-37.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-12-07 14:04:13 -05:00
Kei Kebreau
995ef5ea11
gnu: totem: Update to 3.32.1. 
* gnu/packages/gnome.scm (totem): Update to 3.32.1.
[source]: Remove patches.
[arguments]: Add 'pre-check' phase.  Remove #:parallel-build?.
[native-inputs]: Add python-pylint and xorg-server-for-tests.
[inputs]: Replace python2-pygobject with python-pygobject.
* gnu/packages/patches/totem-meson-easy-codec.patch,
gnu/packages/patches/totem-meson-compat.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2019-12-07 14:04:11 -05:00
Kei Kebreau
a6938bac22
gnu: gnome-control-center: Update to 3.32.2. 
* gnu/packages/gnome.scm (gnome-control-center): Update to 3.32.2.
[source]: Remove patch.
[arguments]: Adjust 'patch-paths' phase accordingly.
[native-inputs]: Add hicolor-icon-theme, python-dbusmock and
xorg-server-for-tests.
[inputs]: Add gnome-session and gsound.
* gnu/packages/patches/gnome-control-center-udisks.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
 2019-12-07 14:04:10 -05:00
Jan Nieuwenhuizen
8c0dcf3e89
gnu: mes: Add patch to remove store name from binary. 
* gnu/packages/patches/mes-remove-store-name.patch: New file, from upstream.
* gnu/packages/mes.scm (mes): Use it.  Add `www.' to homepage.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-12-07 19:30:04 +01:00
Jan Nieuwenhuizen
9720104c43
gnu: Add ncompress. 
* gnu/packages/compression.scm (ncompress): New variable.
* gnu/packages/patches/compress-fix-softlinks.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-12-06 06:52:36 +01:00
Marius Bakke
d098aa3e67
gnu: tcsh: Update to 6.22.02. 
* gnu/packages/patches/tcsh-fix-autotest.patch: Adjust for 6.22.02.
* gnu/packages/patches/tcsh-fix-out-of-bounds-read.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/shells.scm (tcsh): Update to 6.22.02.
[source](patches): Remove obsolete patch.
 2019-12-05 17:59:10 +01:00
Marius Bakke
c9d4e14ab4
gnu: giflib: Update to 5.2.1. 
* gnu/packages/patches/giflib-make-reallocarray-private.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image.scm (giflib): Update to 5.2.1.
[source](uri): Adjust for new file name.
[source](patches): Remove.
[inputs]: Remove, as they were already unused.
[arguments]: Add #:make-flags.  Adjust substitution.  Delete configure phase.
 2019-12-05 17:59:10 +01:00
Marius Bakke
badcb119c5
gnu: libxslt: Update to 1.1.34. 
* gnu/packages/xml.scm (libxslt): Update to 1.1.34.
[arguments]: Add phase to disable fuzz tests.
* gnu/packages/patches/libxslt-generated-ids.patch: Adjust for upstream
changes.
 2019-12-05 17:59:03 +01:00
Marius Bakke
33c1c4c95f
gnu: doxygen: Update to 1.8.16. 
* gnu/packages/documentation.scm (doxygen): Update to 1.8.16.
[arguments]: Add phase 'remove-git-requirement'.
* gnu/packages/patches/doxygen-test.patch: Adjust for upstream changes.
 2019-12-05 17:59:02 +01:00
Marius Bakke
8b2c4eb502
gnu: swig: Update to 4.0.1. 
* gnu/packages/patches/swig-guile-gc.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/swig.scm (swig): Update to 4.0.1.
[source](patches): Remove.
[arguments]: Remove 'set-env' phase.
[inputs]: Change GUILE-2.0 to GUILE-2.2.
 2019-12-05 17:59:02 +01:00
Marius Bakke
47c4c1fe23
gnu: CMake: Update to 3.16.0. 
* gnu/packages/cmake.scm (cmake-minimal): Update to 3.16.0.
[arguments]: Adjust for renamed file.  Disable test RunCMake.install.
* gnu/packages/patches/cmake-curl-certificates.patch: Adjust context.
 2019-12-05 17:59:02 +01:00
Marius Bakke
717867a6ef
gnu: findutils: Update to 4.7.0. 
* gnu/packages/patches/findutils-gnulib-libio.patch,
gnu/packages/patches/findutils-makedev.patch,
gnu/packages/patches/findutils-test-xargs.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (findutils): Update to 4.7.0.
[source](uri): Adjust for file name change.
[source](snippet): Remove.
[source](patches): Remove obsolete.
[arguments]: Remove obsolete workaround.  Add phase to patch tests.
* gnu/packages/commencement.scm (findutils-boot0)[arguments]: Allow 32-bit
time_t on 64-bit systems.
 2019-12-05 17:59:01 +01:00
Marius Bakke
5f1000d5d4
gnu: libffi: Update to 3.3. 
* gnu/packages/patches/libffi-3.2.1-complex-alpha.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libffi.scm (libffi): Update to 3.3.
[source](patches): Remove.
* gnu/packages/python.scm (python-3.7)[arguments]: Remove workaround.
 2019-12-05 17:59:00 +01:00
Marius Bakke
0b3df5c913
gnu: glibc: Update to 2.30. 
* gnu/packages/patches/glibc-CVE-2019-19126.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (glibc): Update to 2.30.
[source](patches): Adjust for 2.30.
(glibc-2.29): New public variable.
 2019-12-05 17:58:59 +01:00
Marius Bakke
e0fb90490e
gnu: ghostscript: Update to 9.50. 
* gnu/packages/ghostscript.scm (ghostscript): Update to 9.50.
* gnu/packages/patches/ghostscript-no-header-id.patch: Adjust context.
 2019-12-05 17:58:59 +01:00
Marius Bakke
9d5aa00906
Merge branch 'master' into core-updates 2019-12-05 17:57:35 +01:00
Marius Bakke
0fa9f29a51
gnu: libjpeg-turbo: Fix CVE-2019-13960 and CVE-2019-2201. 
* gnu/packages/patches/libjpeg-turbo-CVE-2019-2201.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image.scm (libjpeg-turbo/fixed): New variable.
(libjpeg-turbo)[replacement]: New field.
 2019-12-04 23:18:24 +01:00
Marius Bakke
63e8df382f
gnu: feh: Update to 3.3. 
* gnu/packages/patches/feh-fix-tests-for-imlib2-1.6.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/image-viewers.scm (feh): Update to 3.3.
[source](patches): Remove.
 2019-12-04 21:26:50 +01:00
Marius Bakke
33b59c1a3e
Merge branch 'staging' 2019-12-04 20:12:41 +01:00
Mark H Weaver
34369f3103
gnu: icecat: Update to 68.3.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2019-11745, CVE-2019-17005, CVE-2019-17008,
CVE-2019-17009, CVE-2019-17010, CVE-2019-17011, and CVE-2019-17012.

* gnu/packages/patches/icecat-gnuzilla-fixes.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update hash for the firefox source tarball.  Update to the
latest from gnuzilla.git.  Don't apply icecat-gnuzilla-fixes.patch.  Remove
determinism fix in makeicecat that is now upstream.  Tweak a status message.
(icecat)[arguments]: Add "--with-unsigned-addon-scopes=app" configure flag.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt.
 2019-12-04 06:36:45 -05:00
Eric Bavier
dc3e62a494
gnu: handbrake: Upgrade to 1.3.0. 
* gnu/packages/patches/handbrake-opt-in-nvenc.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/video.scm (handbrake)[source]: Upgrade to 1.3.0.  Remove
patch.
[native-inputs]: Remove cmake and curl.
[inputs]: Add dav1d and numactl.
[arguments]: Add "--disable-nvenc" to configure flags in place of patch.
Adjust "bootstrap" phase in response to upstream changes.
Add "patch-SHELL" and "relax-reqs" phases.
 2019-12-03 22:20:22 -06:00
Tobias Geerinckx-Rice
bc134c77e0
gnu: pugixml: Update to 1.10. 
* gnu/packages/xml.scm (pugixml): Update to 1.10.
[source]: Remove obsolete patch.
* gnu/packages/patches/pugixml-versioned-libdir.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-12-03 01:52:44 +01:00
Tobias Geerinckx-Rice
4d441ca174
gnu: thermald: Update to 1.9. 
* gnu/packages/admin.scm (thermald): Update to 1.9.
[source]: Remove patch.
* packages/patches/thermald-make-int-max32-visible.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-12-01 03:14:01 +01:00
Tobias Geerinckx-Rice
c7164ad65f
gnu: fcgi: Update to 2.4.2. 
* gnu/packages/web.scm (fcgi): Update to 2.4.2.
[source]: Use GIT-FETCH and GIT-FILE-NAME.  Remove obsolete patches.
[native-inputs]: Add autoconf, automake, and libtool.
* gnu/packages/patches/fcgi-2.4.0-gcc44-fixes.patch,
gnu/packages/patches/fcgi-2.4.0-poll.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2019-12-01 00:49:15 +01:00
Tobias Geerinckx-Rice
775497549c
gnu: retroarch: Disable the on-line updater. 
Addresses <http://issues.guix.gnu.org/issue/38360>.

* gnu/packages/emulators.scm (retroarch)[source]: Add patch and snippet.
* packages/patches/retroarch-disable-online-updater.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-11-30 22:14:09 +01:00
Julien Lepiller
05fe0a587a
gnu: ocaml-piqilib: Update to 0.6.15. 
* gnu/packages/ocaml.scm (ocaml-piqilib): Update to 0.6.15.
[source]: Remove patch.
[native-inputs]: Remove camlp4.
[propagated-inputs]: Replace ulex with sedlex.
* gnu/packages/patches/ocaml-piqilib-Update-base64.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-11-30 15:50:30 +01:00
Ludovic Courtès
68ac34e120
gnu: openmpi: Increase priority of the PSM component. 
* gnu/packages/patches/openmpi-psm2-priority.patch: Rename to...
* gnu/packages/patches/openmpi-mtl-priorities.patch: ... this.  Add hunk
to change the priority of PSM.
* gnu/packages/mpi.scm (openmpi)[source]: Adjust accordingly.
* gnu/local.mk (dist_patch_DATA): Likewise.
 2019-11-29 15:54:19 +01:00
Tobias Geerinckx-Rice
e00d5b6bbf
gnu: xinetd: Update to 2.3.15.4 [fix build]. 
* gnu/packages/web.scm (xinetd): Update to 2.3.15.4.
[source]: Switch to openSUSE (and Debian) maintenance fork.
Remove obsolete patches.
[native-inputs]: Add automake, autoconf, libtool, and pkg-config.
[home-page]: Update.
* gnu/packages/patches/xinetd-CVE-2013-4342.patch,
gnu/packages/patches/xinetd-fix-fd-leak.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2019-11-29 06:08:18 +01:00
Ludovic Courtès
d8f8adfebf
gnu: psm: Disable memory statistics code. 
* gnu/packages/patches/psm-disable-memory-stats.patch: New file.
* gnu/packages/linux.scm (psm)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-11-28 18:43:54 +01:00
Ludovic Courtès
478880c4a9
gnu: psm: Remove all timestamps. 
* gnu/packages/patches/psm-repro.patch: Use openSuSE's patch.
 2019-11-28 18:43:54 +01:00
Marius Bakke
0897ad7fac
Merge branch 'master' into staging 2019-11-28 00:38:25 +01:00
Pierre Langlois
9943d238e9
gnu: feh: Adapt tests for imlib2 1.6. 
* gnu/packages/patches/feh-fix-tests-for-imlib2-1.6.patch: New file.
* gnu/packages/image-viewers.scm (feh)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2019-11-28 00:33:49 +01:00
Efraim Flashner
7ad3c81240
gnu: gsl: Update to 2.6. 
* gnu/packages/maths.scm (gsl): Update to 2.6.
[source]: Remove patch.
* gnu/packages/patches/gsl-test-i686.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-11-26 22:26:20 +02:00
Guillaume Le Vaillant
cd2ce8abae
gnu: Add pam-mount. 
* gnu/packages/admin.scm (pam-mount): New variable.
* gnu/packages/patches/pam-mount-luks2-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-11-26 00:16:54 +01:00
Tobias Geerinckx-Rice
99b106022c
gnu: xsane: Fix snprintf buffer length. 
* gnu/packages/scanner.scm (xsane)[source]: Add patch.
* gnu/packages/patches/xsane-fix-snprintf-buffer-length.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-11-22 22:16:32 +01:00