c9cca908fa
gnu: python-w3lib: Fix build.
...
* gnu/packages/python-web.scm (python-w3lib): Fix build.
[source]: Add python-w3lib-fix-test-failure.patch.
[arguments]: Use pytest in the 'check phase.
[native-inputs]: Add python-pytest.
* gnu/packages/patches/python-w3lib-fix-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
27a6e8501f
gnu: python-gst: Fix the concatenation of install path.
...
Fixes a regression introduced in a5c2e7961c
2022-04-05 20:41:40 +02:00
9d25dab4db
gnu: python-dotenv: Update to 0.20.0.
...
* gnu/packages/python-xyz.scm (python-dotenv): Update to 0.20.0.
[home-page]: Update home page.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
0748d3febd
gnu: linux: Allow kconfig options to be strings
...
* gnu/packages/linux.scm (config->string): add a clause handling strings
Allows for the declarative configuration of kconfig options which accept
strings, such as CONFIG_MODULE_SIG_KEY.
I've enclosed the given string in quotes, but don't do any kind of
escaping. See the kernel mailing list for the current state of escaped
strings upstream:
https://patchwork.kernel.org/project/linux-kbuild/patch/1431003982-992-1-git-send-email-sr@denx.de/
Apologies to those with double-quotes or backslashes in their
CONFIG_SYSTEM_*_KEYS.
Signed-off-by: antlers <autumnalantlers@gmail.com>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:40 +02:00
3e599b99da
gnu: celluloid: Update to 0.23.
...
* gnu/packages/video.scm (celluloid): Update to 0.23.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
1fed7ab09e
gnu: curlie: Update to 1.6.9
...
* gnu/packages/curl.scm (curlie): Update to 1.6.9
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
2a70e7922c
gnu: xmonad-next: Change #:phases to gexp.
...
* gnu/packages/wm.scm (xmonad-next)[arguments]: Use #$output, #$name
and #$synopsis instead of %output, name and synopsis.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05 20:41:39 +02:00
66177c2b87
Merge branch 'wip-pyyaml'
2022-04-05 19:03:57 +02:00
df2dc0c416
gnu: pigx-scrnaseq: Set NUMBA_CACHE_DIR.
...
This is needed since the update of python-loompy.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[arguments]: Rename
'set-PYTHONPATH to 'set-additional-environment-variables and set
NUMBA_CACHE_DIR.
2022-04-05 18:40:48 +02:00
e721122069
gnu: pigx-scrnaseq: Use new inputs style.
...
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Use plain list.
2022-04-05 18:40:48 +02:00
5d1c9fcdcf
gnu: pigx-scrnaseq: Update to 1.1.8.
...
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.8.
[patches]: Remove.
[native-inputs]: Remove.
* gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-04-05 18:40:48 +02:00
860010ac2a
gnu: r-with-tests: Update to 4.1.3.
...
* gnu/packages/statistics.scm (r-with-tests): Update to 4.1.3.
2022-04-05 15:14:41 +02:00
78e8c20179
gnu: git: Update to 2.35.1.
...
* gnu/packages/version-control.scm (git): Update to 2.35.1.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-05 08:48:47 -04:00
8a9bf794e1
Revert "gnu: git: Update to 2.35.1."
...
This reverts commit 223a3d7f7f
2022-04-05 08:41:36 -04:00
27720d0fe1
gnu: python-pyyaml: Update to 6.0.
...
* gnu/packages/python-xyz.scm (python-pyyaml): Update to 6.0.
2022-04-05 10:56:28 +02:00
d3e1a94391
gnu: python2-pyyaml: Detach source from python-pyyaml.
...
* gnu/packages/python-xyz.scm (python2-pyyaml): Override source and version
fields.
(python-pyyaml)[properties]: Add python2-variant.
2022-04-05 10:56:23 +02:00
20303c0b1c
gnu: eyeD3: Update to 0.9.6.
...
* gnu/packages/mp3.scm (eyed3): Update to 0.9.6.
[propagated-inputs]: Add python-deprecation and python-filetype.
2022-04-04 19:57:12 -04:00
f54f2aa9df
packages: Add 'package-unique-version-prefix'.
...
* gnu/packages.scm (package-unique-version-prefix): New procedure.
* guix/scripts/package.scm (manifest-entry-version-prefix): Use it.
* tests/packages.scm ("package-unique-version-prefix, gcc@8")
("package-unique-version-prefix, grep"): New tests.
2022-04-04 22:58:03 +02:00
4b451813f7
gnu: Add parole.
...
* gnu/packages/xfce.scm (parole): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:03 +02:00
e692dc632c
services: Add 'log-cleanup' service to '%base-services' for build logs.
...
* gnu/services/base.scm (%base-services): Add 'log-cleanup-service-type'
instance.
* doc/guix.texi (Log Rotation): Add example and mention '%base-services'.
2022-04-04 22:58:03 +02:00
3b9b3b4931
services: Add 'log-cleanup-service-type'.
...
* gnu/services/admin.scm (<log-cleanup-configuration>): New record
type.
(log-cleanup-program, log-cleanup-mcron-jobs): New procedures.
(log-cleanup-service-type): New variable.
* doc/guix.texi (Log Rotation): Document it.
2022-04-04 22:58:03 +02:00
2bef31fe25
gnu: mediainfo: Update to 22.03.
...
* gnu/packages/video.scm (mediainfo): Update to 22.03.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:03 +02:00
f9ad9d65fe
gnu: libmediainfo: Update to 22.03.
...
* gnu/packages/video.scm (libmediainfo): Update to 22.03.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:02 +02:00
095c609dfd
gnu: gtkmm: Update to 4.6.1.
...
* gnu/packages/gtk.scm (gtkmm): Update to 4.6.1.
[propagated-inputs]: Remove atkmm because it's no longer needed.
* gnu/packages/gtk.scm (pangomm): Update to 2.50.0.
[propagated-inputs]: Replace 'pango' with 'pango-next'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:02 +02:00
287b98031f
gnu: Add fcitx5-gtk4.
...
* gnu/packages/fcitx5.scm (fcitx5-gtk4): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:02 +02:00
ef3cae59a2
gnu: gtk: Update to 4.6.1.
...
* gnu/local.mk (dist_patch_DATA): Remove gtk-introspection-test.patch.
* gnu/packages/patches/gtk-introspection-test.patch: Remove.
* gnu/packages/gtk.scm (gtk): Update to 4.6.1.
[source]: Remove stale patch.
[arguments]<phases>: Add 'patch-rst2man' phase, correct the binary name of
rst2man to 'rst2man.py'
[inputs]: Add libjpeg-turbo, libpng, libtiff.
[native-inputs]: Add python-docutils.
[propagated-inputs]: Use pango-next.
* gnu/packages/fcitx5.scm (fcitx5-gtk)[arguments]: Disable GTK4 build.
<configure-flags>: Add "-DENABLE_GTK_IM_MODULE=OFF".
<phases>: In phase "patch-install-prefix", Remove GTK4 code.
[inputs]: Remove package gtk.
[outputs]: Remove output "gtk4".
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:02 +02:00
4df7fe14ff
gnu: pango 1.50: Add version 1.50.4.
...
* gnu/packages/gtk.scm(pango-next): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-04 22:58:02 +02:00
345f79b2cf
gnu: freebayes: Fix test suite.
...
* gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Add python.
2022-04-04 22:58:25 +03:00
c1fc65ecb6
gnu: smithwaterman: Use new style for phases.
...
* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Use list
of G-Expressions.
2022-04-04 22:45:37 +03:00
855c8d9d41
gnu: smithwaterman: Fix cross-compiling.
...
* gnu/packages/bioinformatics.scm (smithwaterman)[arguments]: Add
make-flag to use cxx-for-target. Adjust custom 'patch-source and
'build-dynamic phases to use cross toolchain binaries when cross
compiling. Remove trailing #t from phases.
2022-04-04 22:41:54 +03:00
9bd4ed3dde
gnu: marble-qt: Update to 21.12.3.
...
* gnu/packages/kde.scm (marble-qt): Update to 21.12.3.
[inputs]: Add qtwebchannel, qtwebengine.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-04 10:50:21 +02:00
2213c60419
gnu: Add r-zoeppritz.
...
* gnu/packages/cran.scm (r-zoeppritz): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-04 10:44:47 +02:00
4d336ecf20
gnu: Add python-bip39.
...
* gnu/packages/python-xyz.scm (python-bip39): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-04 10:32:01 +02:00
aed1f47c4d
gnu: parallel: Update to 20220322.
...
* gnu/packages/parallel.scm (parallel): Update to 20220322.
2022-04-04 09:28:22 +03:00
367048036d
gnu: stgit: Update to 1.5.
...
* gnu/packages/version-control.scm (stgit): Update to 1.5.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-04 00:10:07 -04:00
223a3d7f7f
gnu: git: Update to 2.35.1.
...
* gnu/packages/version-control.scm (git): Update to 2.35.1.
[phases]: Delete trailing #t.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-04 00:06:48 -04:00
757ececffb
gnu: emacs-elpy: Update to 1746e70.
...
* gnu/packages/emacs-xyz.scm (emacs-elpy): Update to 1746e70.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-04 00:06:32 -04:00
48d3a372fc
gnu: emacs-poet-theme: Update to 16eb694.
...
* gnu/packages/emacs-xyz.scm (emacs-poet-theme): Update to 16eb694.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-04 00:06:32 -04:00
eb4e8a4d9c
gnu: emacs-gnugo: Patch 'gnugo-program' variable.
...
* gnu/packages/emacs-xyz.scm (emacs-gnugo)
[phases]{configure-default-gnugo-xpms-variable}: Rename to...
{configure}: ... this. Patch the 'gnugo-program' variable.
[inputs]: Add gnugo.
[description]: Describe basic usage entry points.
2022-04-04 00:06:31 -04:00
32b713e016
gnu: svt-av1: Update to 0.9.1.
...
* gnu/packages/video.scm (svt-av1): Update to 0.9.1.
2022-04-03 23:09:39 -04:00
7c94eea790
gnu: libaom: Update to 3.3.0.
...
* gnu/packages/video.scm (libaom): Update to 3.3.0.
2022-04-03 23:09:35 -04:00
6ed308bb3c
gnu: linux-libre 4.14: Update to 4.14.275.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.275.
(linux-libre-4.14-pristine-source): Update hash.
2022-04-03 13:04:58 -04:00
32d1f71593
gnu: xterm: Make big cursors work.
...
* gnu/packages/patches/xterm-370-explicit-xcursor.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (xterm)[source]: Add it.
[arguments]<#:configure-flags>: Add "-lXcursor".
2022-04-03 13:46:15 +02:00
b0ea8808b6
gnu: cpufrequtils: Set file-name for source.
...
* gnu/packages/linux.scm (cpufrequtils)[source]: Add file-name field.
2022-04-03 14:10:12 +03:00
bb5e79ca43
gnu: rust-combine-4: Update to 4.6.3.
...
* gnu/packages/crates-io.scm (rust-combine-4): Update to 4.6.3.
[arguments]<cargo-inputs>: Add rust-futures-core-0.3,
rust-tokio-util-0.6. Remove rust-futures-util-0.3.
2022-04-03 14:07:52 +03:00
ae6216d2f8
gnu: rust-shlex-1: Update to 1.1.0.
...
* gnu/packages/crates-io.scm (rust-shlex-1): Update to 1.1.0.
2022-04-03 14:07:52 +03:00
8a7f8d3759
gnu: rust-hyphenation-0.8: Update to 0.8.4.
...
* gnu/packages/crates-io.scm (rust-hyphenation-0.8): Update to 0.8.4.
[arguments]: Don't skip build.
<cargo-inputs>: Remove duplicate entries.
<cargo-development-inputs>: New field. Add rust-criterion-0.3,
rust-once-cell-1, rust-quickcheck-1, rust-unicode-segmentation-1.
(rust-hyphenation-commons-0.8): Update to 0.8.4.
[arguments]: Don't skip build.
2022-04-03 14:07:52 +03:00
66f87ac273
gnu: rust-fsv-0.4: Update to 0.4.7.
...
* gnu/packages/crates-io.scm (rust-fsv-0.4): Update to 0.4.7.
[arguments]: Don't skip build.
<cargo-development-inputs>: New field. Add rust-doc-comment-0.3,
rust-fnv-1, rust-memmap-0.7, rust-quickcheck-0.9, rust-rand-0.7.
2022-04-03 14:07:51 +03:00
2703daf6eb
gnu: rust-criterion-0.3: Update to 0.3.5.
...
* gnu/packages/crates-io.scm (rust-criterion-0.3): Update to 0.3.5.
[arguments]<cargo-inputs>: Replace rust-approx-0.4 with 0.5,
rust-quickcheck-0.9 with 1.
2022-04-03 14:07:51 +03:00
17214a65d8
gnu: rust-criterion-plot-0.4: Update to 0.4.4.
...
* gnu/packages/crates-io.scm (rust-criterion-plot-0.4): Update to 0.4.4.
[arguments]<cargo-inputs>: Replace rust-itertools-0.9 with 0.10.
2022-04-03 14:07:50 +03:00
44d44acaca
gnu: Add rust-os-str-bytes-6.
...
* gnu/packages/crates-io.scm (rust-os-str-bytes-6): New variable.
(rust-os-str-bytes-4): Inherit from rust-os-str-bytes-6.
2022-04-03 14:07:50 +03:00
ed2acb1b16
gnu: Add rust-print-bytes-0.5.
...
* gnu/packages/crates-io.scm (rust-print-bytes-0.5): New variable.
(rust-print-bytes-0.4): Inherit from rust-print-bytes-0.5.
2022-04-03 14:07:50 +03:00
23f56d4b49
gnu: Add rust-os-str-bytes-4.
...
* gnu/packages/crates-io.scm (rust-os-str-bytes-4): New variable.
(rust-os-str-bytes-2): Inherit from rust-os-str-bytes-4.
2022-04-03 14:07:49 +03:00
44ceb9ee13
gnu: Add rust-print-bytes-0.4.
...
* gnu/packages/crates-io.scm (rust-print-bytes-0.4): New variable.
2022-04-03 14:07:49 +03:00
d0bed3629c
gnu: Add rust-smawk-0.3.
...
* gnu/packages/crates-io.scm (rust-smawk-0.3): New variable.
2022-04-03 14:07:48 +03:00
8b54123a9d
gnu: Add rust-ndarray-0.14.
...
* gnu/packages/crates-io.scm (rust-ndarray-0.14): New variable.
* gnu/packages/patches/rust-ndarray-0.14-remove-blas-src.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-04-03 14:07:48 +03:00
73e2312802
gnu: rust-escargot-0.5: Update to 0.5.7.
...
* gnu/packages/crates-io.scm (rust-escargot-0.5): Update to 0.5.7.
[arguments]<cargo-inputs>: Remove rust-lazy-static-1. Add
rust-once-cell-1.
<cargo-development-inputs>: Replace rust-assert-fs-0.11 with 1.
2022-04-03 14:07:48 +03:00
f9fbdb5bbf
gnu: rust-terminal-size-0.1: Update to 0.1.17.
...
* gnu/packages/crates-io.scm (rust-terminal-size-0.1): Update to 0.1.17.
[arguments]: Skip tests.
2022-04-03 14:07:47 +03:00
c76c2bb5a4
gnu: Add rust-lipsum-0.8.
...
* gnu/packages/crates-io.scm (rust-lipsum-0.8): New variable.
2022-04-03 14:07:47 +03:00
c11aac2e1e
gnu: Add rust-unicode-linebreak-0.1.
...
* gnu/packages/crates-io.scm (rust-unicode-linebreak-0.1): New variable.
2022-04-03 14:07:46 +03:00
99252c6d68
gnu: Add rust-uniquote-3.
...
* gnu/packages/crates-io.scm (rust-uniquote-3): New variable.
2022-04-03 14:07:46 +03:00
fe98984880
gnu: Add rust-version-sync-0.9.
...
* gnu/packages/crates-io.scm (rust-version-sync-0.9): New variable.
(rust-version-sync-0.8): Inherit from rust-version-sync-0.9.
2022-04-03 14:07:45 +03:00
cf9a58bd18
gnu: rust-os-pipe-0.9: Don't skip build.
...
* gnu/packages/crates-io.scm (rust-os-pipe-0.9)[arguments]: Inherit from
rust-os-pipe-1.
2022-04-03 14:07:45 +03:00
f90052a87b
gnu: Add rust-os-pipe-1.
...
* gnu/packages/crates-io.scm (rust-os-pipe-1): New variable.
(rust-os-pipe-0.9): Inherit from rust-os-pipe-1.
2022-04-03 14:07:45 +03:00
c4031f909f
gnu: Add rust-kstring-1.
...
* gnu/packages/crates-io.scm (rust-kstring-1): New variable.
2022-04-03 14:07:44 +03:00
a834083441
gnu: Add rust-document-features-0.2.
...
* gnu/packages/crates-io.scm (rust-document-features-0.2): New variable.
2022-04-03 14:07:41 +03:00
3471b8fae2
gnu: radicale: Update to 3.1.5.
...
* gnu/packages/dav.scm (radicale): Update to 3.1.5.
[source]: tags have a leading "v" now.
[arguments]: disable tests temporarily.
Tested-by: Jonathan Brielmaier <jonathan.brielmaier@web.de>
2022-04-03 12:49:07 +02:00
a37a8a23bd
gnu: oil: Update to 0.9.9.
...
* gnu/packages/shells.scm (oil): Update to 0.9.9.
[source]: Add comment on embedded CPython like Ludo’ proposed in
https://issues.guix.gnu.org/53642#3 .
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-03 12:42:18 +02:00
032f2e261c
home: services: zsh: Fix zshenv creation.
...
Fixes a regression introduced by
4935501fd9
2022-04-03 12:42:18 +02:00
9535b62170
gnu: mate-polkit: Improve synopsis.
...
* gnu/packages/mate.scm (mate-polkit): Improve synopsis.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-04-03 12:42:18 +02:00
92b32a0592
gnu: xfce: Add notification support
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* gnu/packages/xfce.scm (xfce)[inputs]: Add XFCE4-NOTIFYD.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-03 12:42:18 +02:00
c315fb0cac
gnu: xfce: Remove input labels.
...
(xfconf, libxfce4ui, xfce4-panel, xfce4-whiskermenu-plugin, xfce,
xfce4-screensaver): Remove input labels.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-03 12:42:18 +02:00
847a6f7c23
gnu: xfce4-screenshooter: Update to 1.9.10.
...
* gnu/packages/xfce.scm (xfce4-screenshooter): Update to 1.9.10.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-03 12:42:17 +02:00
47d4b6ece4
gnu: xfce4-whiskermenu-plugin: Update to 2.6.2.
...
* gnu/packages/xfce.scm (xfce4-whiskermenu-plugin): Update to 2.6.2.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-03 12:42:17 +02:00
7902d17bc8
gnu: cpufrequtils: Update to 008-1.a2f0c39.
...
Fixes build failure on non-x86 architectures, and brings cpufrequtils to the
state of the art from 2011.
* gnu/packages/linux.scm (cpufrequtils)[version]: Use git-version.
[source]: Use git-fetch.
2022-04-02 19:13:21 -07:00
49d0a80738
gnu: cl-dbi: Update to 0.9.5-2.738a74d.
...
* gnu/packages/lisp-xyz.scm (sbcl-dbi): Update to 0.9.5-2.738a74d.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-02 16:36:49 +02:00
a27cef76c2
gnu: python-pycountry: Update to 22.3.5.
...
* gnu/packages/python-xyz.scm (python-pycountry): Update to 22.3.5.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-01 18:01:07 +02:00
8f5043bbc6
gnu: gnunet: Update to 0.16.3.
...
* gnu/packages/gnunet.scm (gnunet): Update to 0.16.3.
[arguments]: Enable all the tests that were disabled.
[inputs]: Use new style. [native-inputs]: Add openssl.
[home-page]: Update URL.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-01 18:01:07 +02:00
6d54f1987f
gnu: vtk: Remove input labels.
...
* gnu/packages/image-processing.scm (vtk)[inputs]: Remove labels.
2022-04-01 18:01:07 +02:00
c3a20d91f9
gnu: vtk@6: Depend on Python 2.x, not 3.x.
...
* gnu/packages/image-processing.scm (vtk-6)[native-inputs]: Replace
PYTHON with PYTHON-2.
2022-04-01 18:01:06 +02:00
c1093dc7a6
gnu: libtool: Add 2.4.7.
...
* gnu/packages/autotools.scm (libtool-2.4.7): New variable.
2022-04-01 18:01:06 +02:00
0fffcfa41d
gnu: libressl: Add 'release-monitoring-url' property.
...
* gnu/packages/tls.scm (libressl)[properties]: New field.
2022-04-01 18:01:06 +02:00
b724c847a2
gnu: cl-usocket: Update to 0.8.4.
...
* gnu/packages/lisp-xyz.scm (sbcl-usocket): Update to 0.8.4.
[inputs]: Use new style.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-01 13:33:56 +02:00
fc94e93c4b
gnu: libfido2: Fix cross-compilation.
...
* gnu/packages/security-token.scm (libfido2)[arguments]: Set the
PKG_CONFIG_EXECUTABLE variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 18:57:05 +03:00
89f3275ff5
gnu: libfido2: Use new style for inputs.
...
* gnu/packages/security-token.scm (libfido2)[inputs]: Use new style.
Sort alphabetically.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 18:40:08 +03:00
4cfc1c433d
gnu: tio: Update to 1.36.
...
* gnu/packages/terminals.scm (tio): Update to 1.36.
[native-inputs]: Add pkg-config.
[inputs]: Add libinih.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 18:25:31 +03:00
9f82d1f1c0
gnu: iverilog: Add zlib dependency for LXT dump file format support.
...
* gnu/packages/fpga.scm (iverilog)[native-inputs]: Add zlib.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 18:22:58 +03:00
58874999c9
gnu: gmid: Update to 1.8.3.
...
* gnu/packages/web.scm (gmid): Update to 1.8.3.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 18:19:19 +03:00
c5ffc9b65d
gnu: plantuml: Update to 1.2022.3.
...
* gnu/packages/uml.scm (plantuml): Update to 1.2022.3.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 17:52:19 +03:00
05e68f31ba
gnu: python-velocyto: Set cache directory for Numba.
...
* gnu/packages/bioinformatics.scm (python-velocyto)[arguments]: Add phase
'set-numba-cache-dir.
2022-03-31 16:02:21 +02:00
8f3dc994bb
gnu: wfmash: Enable test suite.
...
* gnu/packages/bioinformatics.scm (wfmash)[arguments]: Don't disable
tests. Add custom 'check phase based on upstream's own CI tests.
[native-inputs]: Add samtools.
2022-03-31 16:29:34 +03:00
1ca9d9e194
gnu: Add wfmash.
...
* gnu/packages/bioinformatics.scm (wfmash): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 16:14:53 +03:00
8524904e08
gnu: atomic-queue: Do not look for boost when cross-compiling.
...
* gnu/packages/cpp.scm (atomic-queue)[arguments]: When cross-compiling, add a
do-not-check-for-boost phase.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 16:14:53 +03:00
a83918837e
gnu: atomic-queue: Run tests correctly.
...
* gnu/packages/cpp.scm (atomic-queue)[arguments]: In the check phase, run
tests instead of returning a function to run them.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 16:14:52 +03:00
7d331dd203
gnu: htslib: Add bzip2 and xz to inputs.
...
htslib links to libbz2 from bzip2 and liblzma from xz. Therefore, bzip2 and xz
should be listed in inputs even though they are already present implicitly in
native-inputs. Else, cross-compilation will fail.
* gnu/packages/bioinformatics.scm (htslib)[inputs]: Add bzip2 and xz.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 16:14:52 +03:00
973ee1c91d
gnu: gsl: Force bootstrap when cross-compiling to riscv64-linux.
...
* gnu/packages/maths.scm (gsl)[arguments]: Force an autotools bootstrap
when cross-compiling to riscv64-linux.
[native-inputs]: Add autoconf, automake and libtool when cross-compiling
to riscv64-linux.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 16:14:52 +03:00
a69a44bf59
gnu: python-loompy: Update to 3.0.7.
...
* gnu/packages/bioinformatics.scm (python-loompy): Update to 3.0.7.
[arguments]: Add build phases 'fix-h5py-error and 'set-numba-cache-dir;
respect TESTS? argument in 'check phase.
[propagated-inputs]: Add python-click, python-numba, and
python-numpy-groupies.
2022-03-31 14:37:58 +02:00
38b2026515
gnu: Add python-numpy-groupies.
...
* gnu/packages/python-science.scm (python-numpy-groupies): New variable.
2022-03-31 14:37:58 +02:00
668d52a815
gnu: Add riscv-pk.
...
* gnu/packages/virtualization.scm (riscv-pk): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 15:20:11 +03:00
9afad0c16e
gnu: spike: Substitute path to dtc instead of wrapping executables.
...
* gnu/packages/virtualization.scm (spike)[arguments]: Delete the wrap-binary
phase. Add a configure-dtc-path phase that substitutes the absolute path to
dtc.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-03-31 15:20:08 +03:00
Felix Gruber
Zhu Zihao
jgart
antlers
Michael Rohleder
Imran Iqbal
Daniel Meißner
Ricardo Wurmus
Greg Hogan
Maxim Cournoyer
Leo Famulari
Ludovic Courtès
Feng Shu
kiasoc5
Efraim Flashner
Mădălin Ionel Patrașcu
Attila Lendvai
Danny Milosavljevic
Jonathan Brielmaier
Brian Kubisiak
Brendan Tildesley
Vagrant Cascadian
Chadwain Holness
Tanguy Le Carrour
Ludovic Courtès
Sébastien Lerique
Raphaël Mélotte via Guix-patches
Christian Gelinek
cage
Collin J. Doering
Arun Isaac