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78797 Commits (2bd2406cd902a9ef4715269e12ddb551f9255b41)

Author SHA1 Message Date
Roel Janssen 315472eddd
gnu: Add r-heatmap3.
* gnu/packages/cran.scm (r-heatmap3): New variable.
2021-05-26 16:35:25 +02:00
Roel Janssen 64eda9c881
gnu: Add r-tree.
* gnu/packages/cran.scm (r-tree): New variable.
2021-05-26 16:32:25 +02:00
Roel Janssen d80cb98b86
gnu: Add r-rnmf.
* gnu/packages/cran.scm (r-rnmf): New variable.
2021-05-26 16:25:06 +02:00
Roel Janssen c662485287
gnu: Add r-depmixs4.
* gnu/packages/cran.scm (r-depmixs4): New variable.
2021-05-26 16:21:13 +02:00
Roel Janssen cd5d1df152
gnu: Add r-hiddenmarkov.
* gnu/packages/cran.scm (r-hiddenmarkov): New variable.
2021-05-26 16:17:06 +02:00
Roel Janssen 4e9bb49688
gnu: Add r-structuralvariantannotation.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): New variable.
2021-05-26 16:07:17 +02:00
Nicolas Goaziou 2aa622ca7d
gnu: zoxide: Add missing space in description.
* gnu/packages/rust-apps.scm (zoxide)[description]: Add missing space.
2021-05-26 15:48:45 +02:00
Vinicius Monego 001bb08cab
gnu: muse-sequencer: Use qt-build-system.
* gnu/packages/music.scm (muse-sequencer)[build-system]: Use qt-build-system.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:48:18 +02:00
Vinicius Monego 62d6da68d0
gnu: muse-sequencer: Add optional dependencies.
* gnu/packages/music.scm (muse-sequencer)[native-inputs]: Add perl,
python.
[inputs]: Add glib, libinstpatch. Sort alphabetically.
[arguments]: Remove "-DENABLE_INSTPATCH=OFF" from #:configure-flags.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:48:18 +02:00
Vinicius Monego aabea83874
gnu: muse-sequencer: Update to 4.0.0.
* gnu/packages/music.scm (muse-sequencer): Update to 4.0.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:48:18 +02:00
Roel Janssen f5282a1738
gnu: Add r-rcppnumerical.
* gnu/packages/cran.scm (r-rcppnumerical): New variable.
2021-05-26 15:37:43 +02:00
Vinicius Monego d3dcb8c736
gnu: Add lightspark.
* gnu/packages/animation.scm (lightspark): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:36:20 +02:00
Mathieu Othacehe 316d9e0817
guix: ci: Add spec support to latest-evaluations.
* guix/ci.scm (latest-evaluations): Add spec parameter support.
2021-05-26 15:29:32 +02:00
Mathieu Othacehe a2155f41f5
guix: ci: Fix evaluation complete? field.
* guix/ci.scm (<evaluation>): Fix evaluation complete? field.
2021-05-26 15:29:32 +02:00
Zheng junjie efff3fd879
gnu: Add zoxide.
* gnu/packages/rust-apps.scm (zoxide): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:20:06 +02:00
Zheng junjie cba634e56c
gnu: Add rust-seq-macro-0.2.
* gnu/packages/crates-io.scm (rust-seq-macro-0.2): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:15:04 +02:00
Zheng junjie 8bdc62757d
gnu: Add rust-askama-0.10.
* gnu/packages/crates-io.scm (rust-askama-0.10): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:14:51 +02:00
Zheng junjie 296b72db46
gnu: Add rust-askama-derive-0.10.
* gnu/packages/crates-io.scm (rust-askama-derive-0.10): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:14:40 +02:00
Zheng junjie eb3799e822
gnu: Add rust-askama-shared-0.11.
* gnu/packages/crates-io.scm (rust-askama-shared-0.11): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:14:27 +02:00
Zheng junjie a721db8e3b
gnu: Add rust-askama-escape-0.10.
* gnu/packages/crates-io.scm (rust-askama-escape-0.10): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:14:12 +02:00
Zheng Junjie 0413240e3d
gnu: Add rust-clap-3.
* gnu/packages/crates-io.scm (rust-clap-3): New variable.
(rust-clap-2): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:56 +02:00
Zheng Junjie c0371bd0b2
gnu: Add rust-clap-derive-3.
* gnu/packages/crates-io.scm (rust-clap-derive-3): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:41 +02:00
Zheng Junjie d45b6d9d58
gnu: Add rust-strsim-0.10.
* gnu/packages/crates-io.scm (rust-strsim-0.10): New variable.
(rust-strsim-0.9): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:28 +02:00
Zheng Junjie e881704787
gnu: Add rust-os-str-bytes-2.
* gnu/packages/crates-io.scm (rust-os-str-bytes-2): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:10 +02:00
Zheng Junjie 754d009a76
gnu: Add rust-textwrap-0.12.
* gnu/packages/crates-io.scm (rust-textwrap-0.12): New variable.
(rust-textwrap-0.11): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:56 +02:00
Zheng Junjie 8de658d54a
gnu: Add rust-hyphenation-0.8.
* gnu/packages/crates-io.scm (rust-hyphenation-0.8): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:42 +02:00
Zheng Junjie 510b9ff26f
gnu: Add rust-hyphenation-commons-0.8.
* gnu/packages/crates-io.scm (rust-hyphenation-commons-0.8): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:29 +02:00
Zheng Junjie 12bdba7035
gnu: Add rust-ordered-float-2.
* gnu/packages/crates-io.scm (rust-ordered-float-2): New variable.
(rust-ordered-float-1): Inherit from above.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:08 +02:00
Xinglu Chen da08378aa4
gnu: emacs-shell-command+: Use Git repo instead of ELPA URL.
* emacs-xyz.scm (emacs-shell-command+)[source]: Use Git repository instead of
  the unstable ELPA URL.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:49:00 +02:00
Xinglu Chen a866667f55
gnu: Add emacs-org-inline-pdf.
* gnu/packages/emacs-xyz.scm (emacs-org-inline-pdf): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:47:46 +02:00
Xinglu Chen bc251bc7e2
gnu: emacs-transient: Update to 0.3.4.
* gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.4.
[arguments]<#:phases>: Don’t return #t, this will be redundant once
core-updates gets merged.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:46:19 +02:00
Xinglu Chen a5c9843cfe
gnu: emacs-magit: Update to 3.0.0.
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.0.0.
[arguments]<#:phases>: Don’t return #t, this will be redundant once the
core-updates branch has been merged.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:45:57 +02:00
Xinglu Chen 93a5505f12
gnu: emacs-forge: Update to 0.2.0.
* gnu/packages/emacs-xyz.scm (emacs-forge): Update to 0.2.0.
[arguments]<#:phases>: Don’t return #t at the end of phases, this will be
redundant once core-updates gets merged.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:44:19 +02:00
Efraim Flashner c5f7203e3e
gnu: minimap2: Install more files.
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Add modules.
Adjust custom 'install phase to also install library, headers and a
pkg-config file.
2021-05-26 15:22:10 +03:00
Efraim Flashner 36a90d0637
gnu: minimap2: Update to 2.18.
* gnu/packages/bioinformatics.scm (minimap2): Update to 2.18.
[source]: Remove patch.
* gnu/packages/patches/minimap2-aarch64-support.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-05-26 15:22:10 +03:00
Lars-Dominik Braun b085abbeb8
gnu: Add r-bayesfactor.
* gnu/packages/statistics.scm (r-bayesfactor): New variable.
2021-05-26 14:05:16 +02:00
Lars-Dominik Braun 3ea32f5bcf
gnu: Add r-effects.
* gnu/packages/statistics.scm (r-effects): New variable.
2021-05-26 14:05:16 +02:00
Lars-Dominik Braun e53ecc6087
gnu: Add r-logspline.
* gnu/packages/statistics.scm (r-logspline): New variable.
2021-05-26 14:05:16 +02:00
Lars-Dominik Braun 6c7aafbedf
gnu: Add r-kknn.
* gnu/packages/statistics.scm (r-kknn): New variable.
2021-05-26 14:05:15 +02:00
Lars-Dominik Braun fef452b13f
gnu: Add r-hypergeo.
* gnu/packages/cran.scm (r-hypergeo): New variable.
2021-05-26 14:05:15 +02:00
Lars-Dominik Braun 1af2da50bf
gnu: Add r-elliptic.
* gnu/packages/cran.scm (r-elliptic): New variable.
2021-05-26 14:05:15 +02:00
Lars-Dominik Braun 1ae67e6735
gnu: Add r-contfrac.
* gnu/packages/cran.scm (r-contfrac): New variable.
2021-05-26 14:05:15 +02:00
Roel Janssen f921981536
gnu: Add r-decipher.
* gnu/packages/bioconductor.scm (r-decipher): New variable.
2021-05-26 13:31:20 +02:00
Roel Janssen 99873359ed
gnu: Add r-deepsnv.
* gnu/packages/bioconductor.scm (r-deepsnv): New variable.
2021-05-26 13:13:56 +02:00
Roel Janssen 834f649590
gnu: Add r-geneoverlap.
* gnu/packages/bioconductor.scm (r-geneoverlap): New variable.
2021-05-26 13:09:34 +02:00
Mathieu Othacehe 3d704fafba
gnu: cuirass: Update to 1.0.0-20.524b81d.
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-20.524b81d.
2021-05-26 11:48:26 +02:00
Guillaume Le Vaillant 63962f9b6c
gnu: Add minimodem.
* gnu/packages/radio.scm (minimodem): New variable.
2021-05-26 10:31:59 +02:00
Roel Janssen 94b8ad4490
gnu: Add r-chipseeker.
* gnu/packages/bioconductor.scm (r-chipseeker): New variable.
2021-05-26 10:21:32 +02:00
Roel Janssen 5aa68a9408
gnu: Add r-model4you.
* gnu/packages/cran.scm (r-model4you): New variable.
2021-05-26 10:00:51 +02:00
Roel Janssen 3f2a4b0980
gnu: Add r-pvclust.
* gnu/packages/cran.scm (r-pvclust): New variable.
2021-05-26 09:52:12 +02:00