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107866 Commits (63b7039cc188dd510aee2702f26c3d1f1861b95b)

Author SHA1 Message Date
Mădălin Ionel Patrașcu 63b7039cc1
gnu: Add r-baseline. 
* gnu/packages/cran.scm (r-baseline): New variable.
 2023-01-22 08:56:50 +01:00
Ricardo Wurmus 3a00c606c1
gnu: Add r-gwidgets2tcltk. 
* gnu/packages/cran.scm (r-gwidgets2tcltk): New variable.
 2023-01-22 08:56:50 +01:00
Ricardo Wurmus 5e5debf58c
gnu: Add r-gwidgets2. 
* gnu/packages/cran.scm (r-gwidgets2): New variable.
 2023-01-22 08:56:50 +01:00
Maxim Cournoyer bbc8f4c29e
gnu: cheese: Move bash-minimal from propagated-inputs to inputs. 
* gnu/packages/gnome.scm (cheese) [propagated-inputs]: Move bash-minimal to...
[inputs]: ... here.
 2023-01-22 00:26:10 -05:00
Maxim Cournoyer 201fb6c63b
gnu: cheese: Wrap GST_PRESET_PATH to find GstVP8Enc.prs. 
Before this fix, cheese would complain like so:

   (cheese:15094): cheese-WARNING **: Can't find vp8enc preset: "Profile
   Realtime", using alternate preset: "Cheese Realtime". If you see this, make a
   bug report!

If you've run cheese before, make sure to run "rm -rf
~/.local/share/gstreamer-1.0" to make the fix effective.

* gnu/packages/gnome.scm (cheese) [phases]: Set the GST_PRESET_PATH
environment variable in the wrap phase.
 2023-01-22 00:26:10 -05:00
Maxim Cournoyer d10c8f5ef1
gnu: cheese: Sort inputs. 
* gnu/packages/gnome.scm (cheese): Sort inputs.
 2023-01-22 00:26:06 -05:00
Maxim Cournoyer 1a97e68de9
gnu: cheese: Use gexps. 
* gnu/packages/gnome.scm (cheese) [arguments]: Use gexps.
[phases] {wrap-cheese}: Delete extraneous INPUTS binding.
 2023-01-21 16:44:43 -05:00
Maxim Cournoyer 895389583b
gnu: cheese: Update to 43.0. 
* gnu/packages/gnome.scm (cheese): Update to 43.0.
 2023-01-21 16:43:36 -05:00
Simon Tournier ba17b160ed
gnu: Remove reposurgeon. 
This package is broken since 2018 and an update requires Go modules.

* gnu/packages/version-control.scm (reposurgeon): Delete variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-01-21 15:05:35 -05:00
Arun Isaac 900d33527c
gnu: guile2.2-xapian: Replace guile-lib with guile2.2-lib. 
* gnu/packages/guile-xyz.scm (guile2.2-xapian)[propagated-inputs]: Replace
guile-lib with guile2.2-lib.
 2023-01-21 11:06:20 +00:00
Nicolas Goaziou eb5e0f2865
gnu: emacs-jarchive: Update to 0.10.0. 
* gnu/packages/emacs-xyz.scm (emacs-jarchive): Update to 0.10.0.
 2023-01-21 00:00:34 +01:00
Nicolas Goaziou 2470de4690
gnu: emacs-inspector: Update to 0.14. 
* gnu/packages/emacs-xyz.scm (emacs-inspector): Update to 0.14.
 2023-01-21 00:00:33 +01:00
Nicolas Goaziou f8d77c2f8c
gnu: emacs-auctex: Update to 13.1.8. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 13.1.8.
 2023-01-21 00:00:33 +01:00
Nicolas Goaziou ce438bd3a5
gnu: emacs-compat: Update to 29.1.2.0. 
* gnu/packages/emacs-xyz.scm (emacs-compat): Update to 29.1.2.0.
 2023-01-21 00:00:32 +01:00
Cayetano Santos via Guix-patches via 23c3c747fd
gnu: emacs-biblio: Update to 0.2-1.517ec18. 
* gnu/packages/emacs-xyz.scm (emacs-biblio): Update to 0.2-1.517ec18.
[propagated-inputs]: Add EMACS-SEQ.
 2023-01-21 00:00:32 +01:00
Cayetano Santos via Guix-patches via 8b9d671c68
gnu: Add emacs-org-board. 
* gnu/packages/emacs-xyz.scm (emacs-org-board): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2023-01-21 00:00:31 +01:00
Cayetano Santos via Guix-patches via fe47725df1
gnu: emacs-org-present: Update to 0.1-1.4ec04e1. 
* gnu/packages/emacs-xyz.scm (emacs-org-present): Update to 0.1-1.4ec04e1.
[propagated-inputs]: Add EMACS-ORG.
[synopsis]: Remove final full stop.
[description]: Improve typography.
[license]: Use GPL3+.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2023-01-21 00:00:31 +01:00
Maxim Cournoyer 2491a60404
doc: Fix Xvnc service example. 
Reported by bost on #guix (thank you!)

* doc/guix.texi (VNC Services): Add the missing host argument in the SSH
command example.
 2023-01-20 12:32:34 -05:00
Tobias Geerinckx-Rice f00782294a
gnu: libusb-compat: Omit static library. 
* gnu/packages/libusb.scm (libusb-compat)[arguments]:
Add --disable-static to #:configure-flags.
 2023-01-15 01:00:20 +01:00
Tobias Geerinckx-Rice a2ed30856b
gnu: libusb-compat: Update to 0.1.8. 
* gnu/packages/libusb.scm (libusb-compat): Update to 0.1.8.
[native-inputs]: Add autoconf, automake, and libtool.
 2023-01-15 01:00:20 +01:00
Tobias Geerinckx-Rice 4b7faf6912
gnu: conntrack-tools: Update to 1.4.7. 
* gnu/packages/linux.scm (conntrack-tools): Update to 1.4.7.
 2023-01-15 01:00:20 +01:00
Tobias Geerinckx-Rice 4e4ea85c26
gnu: lirc: Remove obsolete trailing #t. 
* gnu/packages/lirc.scm (lirc)[arguments]:
Don't explicitly return #t from phases.
 2023-01-15 01:00:19 +01:00
Tobias Geerinckx-Rice ec3226c398
gnu: lirc: Update to 0.10.2. 
* gnu/packages/lirc.scm (lirc): Update to 0.10.2.
[arguments]: Add a new 'build-reproducibly phase to partially replace…
* gnu/packages/patches/lirc-reproducible-build.patch: …this updated file.
 2023-01-15 01:00:00 +01:00
Tobias Geerinckx-Rice ea37595a7c
gnu: lirc: Build reproducibly. 
* gnu/packages/lirc.scm (lirc)[arguments]: Add a new 'omit-pip-sourceball phase.
 2023-01-15 01:00:00 +01:00
Tobias Geerinckx-Rice 598e43c9df
gnu: nftables: Update to 1.0.6. 
* gnu/packages/linux.scm (nftables): Update to 1.0.6.
 2023-01-15 01:00:00 +01:00
Tobias Geerinckx-Rice 8a36ec67fc
gnu: fdm: Update to 2.2. 
* gnu/packages/mail.scm (fdm): Update to 2.2.
 2023-01-15 01:00:00 +01:00
Tobias Geerinckx-Rice 0dd03c4c0d
gnu: getmail6: Update to 6.18.11. 
* gnu/packages/mail.scm (getmail6): Update to 6.18.11.
 2023-01-15 01:00:00 +01:00
Ludovic Courtès cdc76466e4
gnu: guix-jupyter: Remove hard-coded Guile effective version. 
* gnu/packages/package-management.scm (guix-jupyter)[arguments]: In
'sed-kernel-json' phase, remove hard-coded "3.0".
 2023-01-20 12:17:54 +01:00
Ludovic Courtès ed279c941f
gnu: guix-jupyter: Re-enable parallel tests. 
This reverts d09f3f82b8, which turned out
to be unnecessary.

* gnu/packages/package-management.scm (guix-jupyter)[arguments]: Remove
 #:parallel-tests? #f.
 2023-01-20 12:17:54 +01:00
Ludovic Courtès 0f15cc49e1
gnu: guix-jupyter: Remove input labels. 
* gnu/packages/package-management.scm (guix-jupyter)[inputs]: Remove
labels.
 2023-01-20 12:17:54 +01:00
Ludovic Courtès b60f3941b9
gnu: guix-jupyter: Define 'HOME' prior to 'check' phase. 
Fixes <https://issues.guix.gnu.org/57077>.
Reported by Andreas Enge <andreas@enge.fr>.

* gnu/packages/package-management.scm (guix-jupyter)[arguments]: Add
'define-home' phase.
 2023-01-20 12:17:54 +01:00
Navid Afkhami 43b7a033e3
gnu: Add r-tsis. 
* gnu/packages/bioinformatics.scm (r-tsis): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-01-20 11:06:43 +01:00
Navid Afkhami ddfe68ebbe
gnu: Add r-doubletcollection. 
* gnu/packages/bioinformatics.scm (r-doubletcollection): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-01-20 11:02:37 +01:00
Navid Afkhami 072f605c12
gnu: Add r-scds. 
* gnu/packages/bioconductor.scm (r-scds): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-01-20 11:01:31 +01:00
Simon Tournier c31d8adcb0
gnu: Add r-numbat. 
* gnu/packages/bioconductor.scm (r-numbat): New variable.
 2023-01-20 10:44:28 +01:00
Simon Tournier 2a2165a18e
gnu: Add r-roptim. 
* gnu/packages/cran.scm (r-roptim): New variable.
 2023-01-20 10:44:28 +01:00
Simon Tournier f145afd16f
gnu: Add r-scistreer. 
* gnu/packages/bioconductor.scm (r-scistreer): New variable.
 2023-01-20 10:44:27 +01:00
Simon Tournier a7f1a1c0f0
gnu: Add python-vireosnp. 
* gnu/packages/bioinformatics.scm (python-vireosnp): New variable.
 2023-01-20 10:40:59 +01:00
Arne Babenhauserheide 0d169401cb
gnu: java-logback-classic: Fix build. 
* gnu/packages/java.scm (java-logback-classic)[arguments]: Use input name
"java-javaee-servletapi" instead of "servlet".

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-01-20 09:38:44 +01:00
Tobias Geerinckx-Rice da9af8c72f
gnu: dovecot-pigeonhole: Update to 0.5.20. 
‘No changes - release done to keep version numbers synced.’

* gnu/packages/mail.scm (dovecot-pigeonhole): Update to 0.5.20.
 2023-01-15 01:00:30 +01:00
Tobias Geerinckx-Rice e2d2f516b2
gnu: dovecot: Update to 2.3.20. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.20.
 2023-01-15 01:00:30 +01:00
Tobias Geerinckx-Rice 1dde14e6d3
gnu: man-pages: Update to 6.02. 
* gnu/packages/man.scm (man-pages): Update to 6.02.
 2023-01-15 01:00:30 +01:00
Tobias Geerinckx-Rice 060b6ffbb4
gnu: libvterm: Update to 0.3.1. 
* gnu/packages/terminals.scm (libvterm): Update to 0.3.1.
 2023-01-15 01:00:30 +01:00
Tobias Geerinckx-Rice 3dbf8c1699
gnu: libupnp: Update to 1.14.15. 
* gnu/packages/upnp.scm (libupnp): Update to 1.14.15.
 2023-01-15 01:00:29 +01:00
Tobias Geerinckx-Rice bc7c609ff5
gnu: diffstat: Update to 1.65. 
* gnu/packages/version-control.scm (diffstat): Update to 1.65.
 2023-01-15 01:00:29 +01:00
Tobias Geerinckx-Rice 33c03a9d8e
gnu: motion: Update to 4.5.1. 
* gnu/packages/video.scm (motion): Update to 4.5.1.
 2023-01-15 01:00:29 +01:00
Tobias Geerinckx-Rice a81f89ba39
gnu: lagrange: Update to 1.14.2. 
* gnu/packages/web-browsers.scm (lagrange): Update to 1.14.2.
 2023-01-15 01:00:29 +01:00
André Batista 4e9cb45da0
gnu: tor: Update to 0.4.7.13 [fixes TROVE-2022-002]. 
* gnu/packages/tor.scm (tor): Update to 0.4.7.13.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2023-01-15 01:00:02 +01:00
Tobias Geerinckx-Rice 35955bafc5
gnu: go-github-com-itchyny-gojq: Update to 0.12.11. 
* gnu/packages/web.scm (go-github-com-itchyny-gojq): Update to 0.12.11.
 2023-01-15 01:00:02 +01:00
Tobias Geerinckx-Rice 92b6f227a0
gnu: nginx-documentation: Update to 1.23.3-2916-178f55cf631a. 
* gnu/packages/web.scm (nginx-documentation): Update to 1.23.3-2916-178f55cf631a.
 2023-01-15 01:00:02 +01:00