19fb6bae8c
gnu: r-cghcall: Update to 2.56.0.
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* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.56.0.
2021-11-07 22:34:42 +00:00
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gnu: r-cghbase: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.54.0.
2021-11-07 22:34:42 +00:00
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gnu: r-marray: Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-marray): Update to 1.72.0.
2021-11-07 22:34:42 +00:00
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gnu: r-matrixgenerics: Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.6.0.
2021-11-07 22:34:42 +00:00
0d11010cef
gnu: r-chippeakanno: Update to 3.28.0.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.28.0.
2021-11-07 22:34:42 +00:00
aad12099dd
gnu: r-graph: Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-graph): Update to 1.72.0.
2021-11-07 22:34:42 +00:00
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gnu: r-multtest: Update to 2.50.0.
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* gnu/packages/bioconductor.scm (r-multtest): Update to 2.50.0.
2021-11-07 22:34:42 +00:00
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gnu: r-mbkmeans: Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-mbkmeans): Update to 1.10.0.
2021-11-07 22:34:42 +00:00
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gnu: r-diffbind: Update to 3.4.0.
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* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.0.
2021-11-07 22:34:42 +00:00
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gnu: r-greylistchip: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-greylistchip): Update to 1.26.0.
2021-11-07 22:34:42 +00:00
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gnu: r-apeglm: Update to 1.16.0.
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* gnu/packages/bioconductor.scm (r-apeglm): Update to 1.16.0.
2021-11-07 22:34:42 +00:00
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gnu: r-qvalue: Update to 2.26.0.
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* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.26.0.
2021-11-07 22:34:42 +00:00
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gnu: r-oligo: Update to 1.58.0.
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* gnu/packages/bioconductor.scm (r-oligo): Update to 1.58.0.
2021-11-07 22:34:42 +00:00
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gnu: r-oligoclasses: Update to 1.56.0.
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* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.56.0.
2021-11-07 22:34:41 +00:00
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gnu: r-geneplotter: Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.72.0.
2021-11-07 22:34:41 +00:00
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gnu: r-zlibbioc: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-zlibbioc): Update to 1.40.0.
2021-11-07 22:34:41 +00:00
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gnu: r-xvector: Update to 0.34.0.
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* gnu/packages/bioconductor.scm (r-xvector): Update to 0.34.0.
2021-11-07 22:34:41 +00:00
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gnu: r-vsn: Update to 3.62.0.
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* gnu/packages/bioconductor.scm (r-vsn): Update to 3.62.0.
2021-11-07 22:34:41 +00:00
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gnu: r-variantannotation: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-variantannotation): Update to 1.40.0.
2021-11-07 22:34:41 +00:00
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gnu: r-tximport: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-tximport): Update to 1.22.0.
2021-11-07 22:34:41 +00:00
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gnu: r-topgo: Update to 2.46.0.
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* gnu/packages/bioconductor.scm (r-topgo): Update to 2.46.0.
2021-11-07 22:34:41 +00:00
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gnu: r-systempiper: Update to 2.0.0.
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* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.0.
[propagated-inputs]: Remove r-annotate, r-assertthat, r-batchtools, r-deseq2, r-dot,
r-edger, r-genomicfeatures, r-go-db, r-gostats, r-iranges, r-limma,
r-pheatmap, r-rjson, r-rsvg, r-testthat, and r-variantannotation; add
r-biocgenerics and r-htmlwidgets.
2021-11-07 22:34:41 +00:00
c3d9b4b097
gnu: r-sva: Update to 3.42.0.
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* gnu/packages/bioconductor.scm (r-sva): Update to 3.42.0.
2021-11-07 22:34:41 +00:00
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gnu: r-summarizedexperiment: Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.24.0.
2021-11-07 22:34:41 +00:00
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gnu: r-structuralvariantannotation: Update to 1.10.0.
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* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.10.0.
2021-11-07 22:34:41 +00:00
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gnu: r-slingshot: Update to 2.2.0.
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* gnu/packages/bioconductor.scm (r-slingshot): Update to 2.2.0.
2021-11-07 22:34:41 +00:00
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gnu: r-trajectoryutils: Update to 1.2.0.
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* gnu/packages/bioconductor.scm (r-trajectoryutils): Update to 1.2.0.
2021-11-07 22:34:41 +00:00
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gnu: r-simplifyenrichment: Update to 1.4.0.
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* gnu/packages/bioconductor.scm (r-simplifyenrichment): Update to 1.4.0.
2021-11-07 22:34:41 +00:00
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gnu: r-shortread: Update to 1.52.0.
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* gnu/packages/bioconductor.scm (r-shortread): Update to 1.52.0.
2021-11-07 22:34:40 +00:00
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gnu: r-seqpattern: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-seqpattern): Update to 1.26.0.
2021-11-07 22:34:40 +00:00
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gnu: r-seqlogo: Update to 1.60.0.
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* gnu/packages/bioconductor.scm (r-seqlogo): Update to 1.60.0.
2021-11-07 22:34:40 +00:00
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gnu: r-rtracklayer: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.54.0.
2021-11-07 22:34:40 +00:00
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gnu: r-rsamtools: Update to 2.10.0.
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* gnu/packages/bioconductor.scm (r-rsamtools): Update to 2.10.0.
2021-11-07 22:34:40 +00:00
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gnu: r-rhdf5filters: Update to 1.6.0.
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* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.6.0.
2021-11-07 22:34:40 +00:00
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gnu: r-rhdf5: Update to 2.38.0.
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* gnu/packages/bioconductor.scm (r-rhdf5): Update to 2.38.0.
2021-11-07 22:34:40 +00:00
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gnu: r-reportingtools: Update to 2.34.0.
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* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.34.0.
2021-11-07 22:34:40 +00:00
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gnu: r-regioner: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-regioner): Update to 1.26.0.
2021-11-07 22:34:40 +00:00
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* gnu/packages/bioconductor.scm (r-rcas): Update to 1.20.0.
2021-11-07 22:34:40 +00:00
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gnu: r-rbgl: Update to 1.70.0.
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* gnu/packages/bioconductor.scm (r-rbgl): Update to 1.70.0.
2021-11-07 22:34:40 +00:00
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* gnu/packages/bioconductor.scm (r-protgenerics): Update to 1.26.0.
2021-11-07 22:34:40 +00:00
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gnu: r-pcamethods: Update to 1.86.0.
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* gnu/packages/bioconductor.scm (r-pcamethods): Update to 1.86.0.
2021-11-07 22:34:40 +00:00
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* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.36.0.
2021-11-07 22:34:40 +00:00
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2021-11-07 22:34:39 +00:00
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* gnu/packages/bioconductor.scm (r-mzid): Update to 1.32.0.
2021-11-07 22:34:39 +00:00
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gnu: r-msnid: Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-msnid): Update to 1.28.0.
2021-11-07 22:34:39 +00:00
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gnu: r-msnbase: Update to 2.20.0.
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* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.20.0.
2021-11-07 22:34:39 +00:00
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gnu: r-mutationalpatterns: Update to 3.4.0.
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* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.4.0.
[propagated-inputs]: Add r-rcolorbrewer.
2021-11-07 22:34:39 +00:00
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gnu: r-methylkit: Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-methylkit): Update to 1.20.0.
2021-11-07 22:34:39 +00:00
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gnu: r-limma: Update to 3.50.0.
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* gnu/packages/bioconductor.scm (r-limma): Update to 3.50.0.
2021-11-07 22:34:39 +00:00
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gnu: r-keggrest: Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.34.0.
2021-11-07 22:34:39 +00:00
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gnu: r-interactivedisplaybase: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-interactivedisplaybase): Update to 1.32.0.
2021-11-07 22:34:39 +00:00
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gnu: r-impute: Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-impute): Update to 1.68.0.
2021-11-07 22:34:39 +00:00
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* gnu/packages/bioconductor.scm (r-rhtslib): Update to 1.26.0.
2021-11-07 22:34:39 +00:00
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gnu: r-hpar: Update to 1.36.0.
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* gnu/packages/bioconductor.scm (r-hpar): Update to 1.36.0.
2021-11-07 22:34:39 +00:00
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gnu: r-gseabase: Update to 1.56.0.
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* gnu/packages/bioconductor.scm (r-gseabase): Update to 1.56.0.
2021-11-07 22:34:39 +00:00
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gnu: r-gostats: Update to 2.60.0.
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* gnu/packages/bioconductor.scm (r-gostats): Update to 2.60.0.
2021-11-07 22:34:39 +00:00
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gnu: r-genomicranges: Update to 1.46.0.
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* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.46.0.
2021-11-07 22:34:39 +00:00
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gnu: r-genomicfiles: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.30.0.
2021-11-07 22:34:38 +00:00
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gnu: r-genomicfeatures: Update to 1.46.1.
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* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.1.
2021-11-07 22:34:38 +00:00
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gnu: r-genomicalignments: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.30.0.
2021-11-07 22:34:38 +00:00
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gnu: r-genomeinfodb: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.30.0.
2021-11-07 22:34:38 +00:00
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gnu: r-genomation: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-genomation): Update to 1.26.0.
2021-11-07 22:34:38 +00:00
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gnu: r-geneoverlap: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.30.0.
2021-11-07 22:34:38 +00:00
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gnu: r-genefilter: Update to 1.76.0.
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* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.76.0.
2021-11-07 22:34:38 +00:00
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gnu: r-gage: Update to 2.44.0.
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* gnu/packages/bioconductor.scm (r-gage): Update to 2.44.0.
2021-11-07 22:34:38 +00:00
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* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.40.0.
2021-11-07 22:34:38 +00:00
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gnu: r-ensembldb: Update to 2.18.0.
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* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.18.0.
2021-11-07 22:34:38 +00:00
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gnu: r-edger: Update to 3.36.0.
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* gnu/packages/bioconductor.scm (r-edger): Update to 3.36.0.
2021-11-07 22:34:38 +00:00
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gnu: r-edaseq: Update to 2.28.0.
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* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.28.0.
2021-11-07 22:34:38 +00:00
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gnu: r-dirichletmultinomial: Update to 1.36.0.
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* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.36.0.
2021-11-07 22:34:38 +00:00
cb87707987
gnu: r-dexseq: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.40.0.
2021-11-07 22:34:38 +00:00
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gnu: r-deseq2: Update to 1.34.0.
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* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.34.0.
2021-11-07 22:34:38 +00:00
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gnu: r-copywriter: Update to 2.26.0.
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* gnu/packages/bioconductor.scm (r-copywriter): Update to 2.26.0.
2021-11-07 22:34:37 +00:00
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gnu: r-complexheatmap: Update to 2.10.0.
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* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.10.0.
[propagated-inputs]: Remove r-cairo.
2021-11-07 22:34:37 +00:00
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gnu: r-chipseq: Update to 1.44.0.
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* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.44.0.
2021-11-07 22:34:37 +00:00
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gnu: r-chipseeker: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.0.
2021-11-07 22:34:37 +00:00
395e9ab420
gnu: r-category: Update to 2.60.0.
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* gnu/packages/bioconductor.scm (r-category): Update to 2.60.0.
2021-11-07 22:34:37 +00:00
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gnu: r-bsgenome: Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.62.0.
2021-11-07 22:34:37 +00:00
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gnu: r-biovizbase: Update to 1.42.0.
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* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.42.0.
2021-11-07 22:34:37 +00:00
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gnu: r-biostrings: Update to 2.62.0.
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* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.62.0.
2021-11-07 22:34:37 +00:00
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gnu: r-biomart: Update to 2.50.0.
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* gnu/packages/bioconductor.scm (r-biomart): Update to 2.50.0.
2021-11-07 22:34:37 +00:00
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gnu: r-biobase: Update to 2.54.0.
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* gnu/packages/bioconductor.scm (r-biobase): Update to 2.54.0.
2021-11-07 22:34:37 +00:00
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gnu: r-bamsignals: Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.26.0.
2021-11-07 22:34:37 +00:00
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gnu: r-aroma-light: Update to 3.24.0.
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* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.24.0.
2021-11-07 22:34:37 +00:00
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gnu: r-annotationhub: Update to 3.2.0.
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* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.2.0.
2021-11-07 22:34:37 +00:00
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* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.36.0.
2021-11-07 22:34:37 +00:00
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gnu: r-annotationfilter: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.18.0.
2021-11-07 22:34:36 +00:00
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gnu: r-annotationdbi: Update to 1.56.1.
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* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.56.1.
2021-11-07 22:34:36 +00:00
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gnu: r-annotate: Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-annotate): Update to 1.72.0.
2021-11-07 22:34:36 +00:00
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gnu: r-affxparser: Update to 1.66.0.
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* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.66.0.
2021-11-07 22:34:36 +00:00
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gnu: r-affyio: Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-affyio): Update to 1.64.0.
2021-11-07 22:34:36 +00:00
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* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.66.0.
2021-11-07 22:34:36 +00:00
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gnu: r-affycontam: Update to 1.52.0.
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* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.52.0.
2021-11-07 22:34:36 +00:00
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gnu: r-affycompatible: Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.54.0.
2021-11-07 22:34:36 +00:00
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gnu: r-affycomp: Update to 1.70.0.
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* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.70.0.
2021-11-07 22:34:36 +00:00
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gnu: r-affy: Update to 1.72.0.
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* gnu/packages/bioconductor.scm (r-affy): Update to 1.72.0.
2021-11-07 22:34:36 +00:00
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gnu: r-iranges: Update to 2.28.0.
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* gnu/packages/bioconductor.scm (r-iranges): Update to 2.28.0.
2021-11-07 22:34:36 +00:00
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gnu: r-ideoviz: Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.30.0.
2021-11-07 22:34:36 +00:00
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gnu: r-bluster: Update to 1.4.0.
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* gnu/packages/bioconductor.scm (r-bluster): Update to 1.4.0.
2021-11-07 22:34:36 +00:00
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gnu: r-delayedarray: Update to 0.20.0.
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* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.20.0.
2021-11-07 22:34:35 +00:00
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gnu: r-deepsnv: Update to 1.40.0.
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* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.40.0.
2021-11-07 22:34:35 +00:00
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gnu: r-decipher: Update to 2.22.0.
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* gnu/packages/bioconductor.scm (r-decipher): Update to 2.22.0.
2021-11-07 22:34:35 +00:00
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gnu: r-cummerbund: Update to 2.36.0.
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* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.36.0.
2021-11-07 22:34:35 +00:00
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gnu: r-coverageview: Update to 1.32.0.
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* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.32.0.
2021-11-07 22:34:35 +00:00
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gnu: r-biocgenerics: Update to 0.40.0.
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* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.40.0.
2021-11-07 22:34:35 +00:00
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gnu: r-biocversion: Update to 3.14.0.
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* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.14.0.
2021-11-07 22:34:35 +00:00
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gnu: r-aneufinder: Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.22.0.
2021-11-07 22:34:35 +00:00
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gnu: r-biocparallel: Update to 1.28.0.
...
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.0.
[arguments]: Adjust build phase to patch renamed file.
2021-11-07 22:34:35 +00:00
4a92ab58f6
gnu: Add r-msfeatures.
...
* gnu/packages/bioconductor.scm (r-msfeatures): New variable.
2021-11-07 22:34:34 +00:00
92b85194cd
gnu: r-with-tests: Update patch to DESCRIPTION file.
...
* gnu/packages/statistics.scm (r-with-tests)[arguments]: Patch line breaks and
spaces in DESCRIPTION file to ensure reproducible build.
2021-11-07 22:34:34 +00:00
108111114d
gnu: r-with-tests: Remove trailing #T.
...
* gnu/packages/statistics.scm (r-with-tests)[arguments]: Remove trailing #T
from build phases.
2021-11-07 22:34:34 +00:00
17d0bbef88
gnu: r-with-tests: Update to 4.1.2.
...
* gnu/packages/statistics.scm (r-with-tests): Update to 4.1.2.
2021-11-07 22:34:29 +00:00
bd41e590dd
gnu: ardour: Update to 6.9.
...
* gnu/packages/audio.scm (ardour): Update to 6.9.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-11-07 23:10:41 +01:00
dab2ac2ed5
gnu: 0ad: Update to 0.0.25b-alpha.
...
* gnu/packages/games.scm (0ad-data): Update to 0.0.25b-alpha.
Unpack .zip files without need for a snippet.
(0ad): Update to 0.0.25b-alpha.
[arguments]<#:phases>: Properly unbundle cxxtest. Respect #:tests?.
Install Freedesktop mimeinfo.
Install icon to hicolor theme instead of share/pixmaps, which I don't
think is used.
<#:tests> Disable tests for now since they don't run.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-07 22:57:05 +01:00
90cd653abe
gnu: ansible-core: Update to 2.11.6.
...
* gnu/packages/admin.scm (ansible-core): Update to 2.11.6.
2021-11-07 22:52:43 +01:00
031906be76
gnu: xfstests: Update to 1.1.0-1.bae1d15.
...
* gnu/packages/file-systems.scm (xfstests): Update to 1.1.0-1.bae1d15.
2021-11-07 22:52:43 +01:00
6a36f4e4fc
gnu: lv2: Update to 1.18.2.
...
* gnu/packages/audio.scm (lv2): Update to 1.18.2.
2021-11-07 22:52:43 +01:00
c569c735c2
gnu: jalv: Update to 1.6.6.
...
* gnu/packages/audio.scm (jalv): Update to 1.6.6.
2021-11-07 22:52:43 +01:00
b331ee62f5
gnu: lilv: Update to 0.24.12.
...
* gnu/packages/audio.scm (lilv): Update to 0.24.12.
[arguments]: Don't explicitly return #t from phases.
2021-11-07 22:52:42 +01:00
55bef80580
gnu: dvdisaster: Remove uninstallation script.
...
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Add a new
'remove-uninstall-script phase.
2021-11-07 22:52:42 +01:00
153d9bca72
gnu: dvdisaster: Update to 0.79.9.
...
* gnu/packages/cdrom.scm (dvdisaster): Update to 0.79.9.
[source, home-page]: Update home page.
[arguments]: Don't explicitly return #t from phases.
2021-11-07 22:52:42 +01:00
92af2ec5d0
gnu: openttd: Fix build failure.
...
* packages/games.scm (openttd)[native-inputs]: Use gcc-9 to fix build
failure.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-07 22:13:37 +01:00
c9b9919858
gnu: openttd-openmsx: Update to 0.4.2.
...
* packages/games.scm (openttd-openmsx): Update to 0.4.2.
[native-inputs]: Replace python-2 with python-wrapper.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-07 22:13:37 +01:00
574f4b7d3f
gnu: openttd-opensfx: Update to 1.0.2.
...
* packages/games.scm (openttd-opensfx): Update to 1.0.2.
[native-inputs]: Replace python-2 with python.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-07 22:13:37 +01:00
c2759211fc
gnu: openttd-opengfx: Update to 7.1.
...
* packages/games.scm (openttd-opengfx): Update to 7.1.
[native-inputs]: Replace python-2 with python.
[arguments]: Use cc-for-target.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-07 22:13:36 +01:00
b6bb7720eb
gnu: openttd-engine: Update to 12.0.
...
* gnu/packages/games.scm (openttd-engine): Update engine to 12.0.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-07 22:13:36 +01:00
2ebadb390e
gnu: Add weechat-wee-slack.
...
* gnu/packages/messaging.scm (weechat-wee-slack): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:58:03 +02:00
7ebed0cdc8
gnu: Add weechat-matrix.
...
* gnu/packages/messaging.scm (weechat-matrix): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:50:32 +02:00
73679a6837
gnu: Add python-webcolors.
...
* gnu/packages/python-web.scm (python-webcolors): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:50:27 +02:00
6e3eba9d1f
gnu: Add rust-log4rs-1.
...
* gnu/packages/crates-io.scm (rust-log4rs-1): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:48 +02:00
b76b29957e
gnu: Add rust-log-mdc-0.1.
...
* gnu/packages/crates-io.scm (rust-log-mdc-0.1): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:46 +02:00
e9eb6b1102
gnu: Add rust-diffus-0.10.
...
* gnu/packages/crates-io.scm (rust-diffus-0.10): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:44 +02:00
38912f139f
gnu: Add rust-diffus-derive-0.10.
...
* gnu/packages/crates-io.scm (rust-diffus-derive-0.10): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:43 +02:00
551e39ccb1
gnu: Add rust-snake-case-0.3.
...
* gnu/packages/crates-io.scm (rust-snake-case-0.3): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:41 +02:00
cd968c83aa
gnu: Add rust-xmltree-0.10.
...
* gnu/packages/crates-io.scm (rust-xmltree-0.10): New variable.
(rust-xmltree-0.8): Inherit from above.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:39 +02:00
9bf3bc8418
gnu: Add rust-color-backtrace-0.5.
...
* gnu/packages/crates-io.scm (rust-color-backtrace-0.5): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:28:37 +02:00
3e6f857354
gnu: x42-plugins: Prepare for cross-compiling.
...
* gnu/packages/music.scm (x42-plugins)[arguments]: Remove
'set-CC-variable phase. Use cc-for-target in make-flags.
2021-11-07 22:25:23 +02:00
6f45418416
gnu: x42-plugins: Update to 20211016.
...
* gnu/packages/music.scm (x42-plugins): Update to 20211016.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-07 22:21:20 +02:00
a0f1476e8f
gnu: emacs-stream: Don't set a source file name.
...
This is a follow-up to 678248f5ea
2021-11-07 14:20:41 +01:00
dc8e9d6f88
gnu: osm2pgsql: Update to 1.5.1.
...
* gnu/packages/geo.scm (osm2pgsql): Update to 1.5.1.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-11-07 10:01:31 +01:00
53bbbfb77c
gnu: protozero: Update to 1.7.0.
...
* gnu/packages/protobuf.scm (protozero): Update to 1.7.0.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-11-07 09:59:59 +01:00
b217208dd0
gnu: libosmium: Update to 2.17.1.
...
* gnu/packages/geo.scm (libosmium): Update to 2.17.1.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-11-07 09:56:55 +01:00
b11badfb4c
gnu: webkitgtk: Improve the 32-bit x86 target check.
...
* gnu/packages/webkit.scm (webkitgtk)[arguments]: In the
'prepare-build-environment' phase, use 'target-x86-32?'.
2021-11-07 01:38:59 -04:00
b96ae47bb0
gnu: emacs-geiser-guile: Update to 0.18.
...
* gnu/packages/emacs-xyz.scm (emacs-geiser-guile): Update to 0.18.
[arguments]<#:phases>: Remove trailing #t from phase.
2021-11-07 00:20:35 +01:00
b2ee0798ee
gnu: emacs-helm-bibtex: Update to 2.0.0-3.aa77534.
...
* gnu/packages/emacs-xyz.scm (emacs-helm-bibtex): Update to 2.0.0-3.aa77534.
2021-11-06 22:42:55 +01:00
9c30669551
gnu: Add emacs-citar.
...
* gnu/packages/emacs-xyz.scm (emacs-citar): New variable.
2021-11-06 22:15:36 +01:00
290a7664b5
gnu: fio: Disable native CPU compiler optimizations.
...
* gnu/packages/benchmark.scm (fio)[arguments]: Add #:configure-flags. Adjust
configure phase accordingly.
2021-11-06 17:46:37 +01:00
75f2eb41cc
gnu: fio: Disable Ceph/RADOS support.
...
This little-used feature is easy to add on demand and blows up the closure.
* gnu/packages/benchmark.scm (fio)[inputs]: Remove CEPH.
2021-11-06 17:46:37 +01:00
5e7c2eb7ae
gnu: fio: Don't bother wrapping scripts.
...
fio comes with many scripts of varying utility. Some require extra additional
programs, which users can easily install as needed; there is little use in
imposing all optional dependencies on all users of fio.
* gnu/packages/benchmark.scm (fio)[arguments]: Remove patch-paths phase.
Rewrite move-outputs to move all discovered scripts and not wrap any.
[inputs]: Remove GNUPLOT, PYTHON-2, PYTHON2-NUMPY, and PYTHON2-PANDAS. Add
PYTHON.
2021-11-06 17:46:37 +01:00
567c4f4495
Update mailmap and copyright assignments for Liliana Marie Prikler.
...
Use full names everywhere.
* .mailmap: Use full name for Liliana Marie Prikler.
* gnu/packages/zig.scm: Likewise.
2021-11-06 16:03:43 +01:00
e58994f113
gnu: msmtp: Update to 1.8.19.
...
* gnu/packages/mail.scm (msmtp): Update to 1.8.19.
[properties]: Set ‘release-monitoring-url’.
2021-11-06 10:47:14 +01:00
39bf4eb38f
gnu: Add emacs-devdocs.
...
* gnu/packages/emacs-xyz.scm (emacs-devdocs): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:46:14 +01:00
c161ec6dc5
gnu: Add emacs-excorporate.
...
* gnu/packages/emacs-xyz.scm (emacs-excorporate): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:43:29 +01:00
d101486d7f
gnu: Add emacs-fsm.
...
* gnu/packages/emacs-xyz.scm (emacs-fsm): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:43:29 +01:00
2a66d806a8
gnu: Add emacs-soap-client.
...
* gnu/packages/emacs-xyz.scm (emacs-soap-client): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:43:29 +01:00
68abfea5c2
gnu: Add emacs-url-http-ntlm.
...
* gnu/packages/emacs-xyz.scm (emacs-url-http-ntlm): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:43:29 +01:00
dfb7416517
gnu: Add emacs-nadvice.
...
* gnu/packages/emacs-xyz.scm (emacs-nadvice): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:43:28 +01:00
36d1f71440
gnu: Add emacs-ntlm.
...
* gnu/packages/emacs-xyz.scm (emacs-ntlm): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-11-06 10:43:28 +01:00
d82fd7c2dd
gnu: webkitgtk: Disable SSE2 when not on x86_64.
...
* gnu/packages/webkit.scm (webkitgtk)[#:phases]: Add ‘disable-sse2’ if the
current (target) system is not an x86_64 one.
2021-11-06 10:33:52 +01:00
3c3131b1c5
gnu: emacs-git-modes: Add TeXinfo markup to description.
...
* gnu/packages/emacs-xyz.scm (git-modes): Add TeXinfo markup.
2021-11-06 10:20:15 +01:00
af14c6f101
gnu: emacs-git-modes: Update to 1.4.0.
...
* gnu/packages/emacs-xyz.scm (emacs-git-modes): Update to 1.4.0.
2021-11-06 10:19:31 +01:00
4fd12fb00d
gnu: webkitgtk: Fix build on i686-linux.
...
Fixes <https://bugs.gnu.org/51591 >.
* gnu/packages/webkit.scm (webkitgtk)[arguments]: Use quasiquote for the
argument list. When building on i686-linux, insert a 'substitute*' form in
the 'prepare-build-environment' phase that disables the use of
'__builtin_mul_overflow'.
2021-11-06 00:40:54 -04:00
c55a64cb7e
gnu: opam: Update to 2.1.1.
...
* gnu/packages/ocaml.scm (opam): Update to 2.1.1.
2021-11-05 23:13:25 +01:00
43cb6aa4a0
gnu: Use license: prefix.
...
* gnu/packages/markup.scm (hoedown, markdown, discount,
perl-text-markdown-discount, cmark, smu, md4c, python-mistletoe)
[license]: Prefix with license:.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-05 21:38:45 +01:00
90ab3ef812
gnu: Add lowdown.
...
* gnu/packages/markup.scm (lowdown): New variable.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2021-11-05 21:36:04 +01:00
3827c66dc1
gnu: diffoscope: Update to 190.
...
* gnu/packages/diffoscope.scm (diffoscope): Update to 190.
[arguments]: Remove 'skip-python-tests phase.
2021-11-05 11:57:48 -07:00
1ffc0a6be3
gnu: git-annex: Update to 8.20211028.
...
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20211028.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-05 09:32:43 +02:00
575fcd3045
gnu: Add i3status-rust.
...
* gnu/packages/rust-apps.scm (i3status-rust): New variable.
* gnu/packages/patches/i3status-rust-enable-unstable-features.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 20:09:53 +02:00
b30e2834f7
gnu: Add rust-libpulse-binding-2.
...
* gnu/packages/crates-io.scm (rust-libpulse-binding-2): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 20:09:53 +02:00
468bb6710f
gnu: Add rust-libpulse-sys-1.
...
* gnu/packages/crates-io.scm (rust-libpulse-sys-1): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 20:09:53 +02:00
0e6a21c087
gnu: Add rust-cpuprofiler-0.0.
...
* gnu/packages/crates-io.scm (rust-cpuprofiler-0.0): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 20:09:38 +02:00
b7aff8e640
gnu: parlatype: Update to 3.0.
...
* gnu/packages/gnome.scm (parlatype): Update to 3.0.
[homepage]: Update URL.
2021-11-04 16:11:22 +01:00
395e3ba3dd
gnu: emacs-ivy-posframe: Update to 0.6.3.
...
* gnu/packages/emacs-xyz.scm (emacs-ivy-posframe): Update to 0.6.3.
2021-11-04 15:28:36 +01:00
d45e823047
gnu: emacs-posframe: Update to 1.1.0.
...
* gnu/packages/emacs-xyz.scm (emacs-posframe): Update to 1.1.0.
2021-11-04 15:28:22 +01:00
46b4f9b9a7
gnu: Add vim-nerdcommenter.
...
* gnu/packages/vim.scm (vim-nerdcommenter): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 15:30:34 +02:00
88d5081986
gnu: emacs-flymake-shellcheck: Add reference to shellcheck.
...
* gnu/packages/emacs-xyz.scm (emacs-flymake-shellcheck)
[inputs]: Add shellcheck.
[arguments]: Add substitute-shellcheck-path phase.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 14:48:43 +02:00
1007eb4874
Revert "gnu: webkitgtk: Use GCC 11 instead of Clang."
...
This reverts commit 63f78f6a6e
2021-11-04 08:27:15 -04:00
72bf3c0b79
gnu: emacs-eshell-did-you-mean: Update to 0.2.
...
* gnu/packages/emacs-xyz.scm (emacs-eshell-did-you-mean): Update to 0.2.
2021-11-04 10:54:37 +01:00
fcb8888f4d
gnu: emacs-ebib: Update to 2.33.
...
* gnu/packages/emacs-xyz.scm (emacs-ebib): Update to 2.33.
2021-11-04 10:50:57 +01:00
63f78f6a6e
gnu: webkitgtk: Use GCC 11 instead of Clang.
...
WebkitGTK still compiles fine on x86_64 using GCC 11. This is the only
architecture known to compile currently, as i686 fails with Clang and others
fail due to unsatisfied dependencies.
* gnu/packages/webkit.scm (webkitgtk)[#:phases]: Drop
‘prepare-build-environment’.
[native-inputs]: Drop clang, add gcc.
2021-11-04 06:11:50 +01:00
63c356fe13
gnu: linux-libre 4.4: Update to 4.4.291.
...
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.291.
(linux-libre-4.4-pristine-source): Update hash.
2021-11-03 23:00:37 -04:00
20b93133e2
gnu: linux-libre 4.9: Update to 4.9.289.
...
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.289.
(linux-libre-4.9-pristine-source): Update hash.
2021-11-03 23:00:36 -04:00
deb34d242b
gnu: linux-libre 4.14: Update to 4.14.254.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.254.
(linux-libre-4.14-pristine-source): Update hash.
2021-11-03 23:00:36 -04:00
37757fd6b9
gnu: linux-libre 4.19: Update to 4.19.215.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.215.
(linux-libre-4.19-pristine-source): Update hash.
2021-11-03 23:00:36 -04:00
fd7b06f40e
gnu: linux-libre 5.4: Update to 5.4.157.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.157.
(linux-libre-5.4-pristine-source): Update hash.
2021-11-03 23:00:36 -04:00
e3ccd6ade8
gnu: linux-libre 5.10: Update to 5.10.77.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.77.
(linux-libre-5.10-pristine-source): Update hash.
2021-11-03 23:00:35 -04:00
8d2e77bf45
gnu: linux-libre: Update to 5.14.16.
...
* gnu/packages/linux.scm (linux-libre-5.14-version): Update to 5.14.16.
(linux-libre-5.14-pristine-source): Update hash.
2021-11-03 23:00:32 -04:00
19c38b2acc
gnu: flightgear: Prepare to run test suite.
...
* gnu/packages/games.scm (flightgear)[arguments]: Add phase to build
test binary. Add phase to skip some failing tests. Move 'check phase to
after 'install-data.
2021-11-04 00:11:09 +02:00
b93e06a964
gnu: flightgear: Use system cppunit.
...
* gnu/packages/games.scm (flightgear)[source]: Adjust snippet to remove
bundled cppunit.
[arguments]: Add configure-flag to use system cppunit.
2021-11-04 00:11:09 +02:00
d3abd5cd8b
gnu: simgear: Remove bundled expat.
...
* gnu/packages/games.scm (simgear)[source]: Add snippet to remove
bundled expat.
[arguments]: Add configure-flag to use system expat.
2021-11-04 00:11:08 +02:00
ea173bd874
gnu: Remove openscenegraph-3.4.
...
* gnu/packages/graphics.scm (openscenegraph-3.4): Remove variable.
2021-11-04 00:11:08 +02:00
aae82f2a95
gnu: flightgear: Build with newer inputs.
...
* gnu/packages/games.scm (flightgear)[inputs]: Replace
openscenegraph-3.4 with openscenegraph, boost-for-mysql with boost.
(simgear)[inputs]: Same.
2021-11-04 00:11:08 +02:00
230b34cb5c
gnu: simgear: Honor #:tests? flag.
...
* gnu/packages/games.scm (simgear)[arguments]: Adjust custom 'check
phase to honor the #:tests? flag.
2021-11-04 00:11:08 +02:00
3a5b1cc32a
gnu: flightgear: Build with qt-build-system.
...
* gnu/packages/games.scm (flightgear)[build-system]: Switch to
qt-build-system.
[arguments]: Remove 'wrap-executable phase.
2021-11-04 00:11:08 +02:00
347227efc1
gnu: flightgear: Update to 2020.3.11.
...
* gnu/packages/games.scm (simgear, flightgear): Update to 2020.3.11.
(flightgear-data): Update uri.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-11-04 00:11:07 +02:00
a18fea5009
Revert "gnu: Add rust-sysinfo-0.20."
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This reverts commit cc415fd880
2021-11-03 23:09:36 +01:00
5da0efbe9e
gnu: Add rust-polars-0.16.
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* gnu/packages/crates-io.scm (rust-polars-0.16): New variable.
(rust-polars-0.15): Inherit from above.
2021-11-03 23:00:58 +01:00
d2c7e9c057
gnu: Add rust-polars-lazy-0.16.
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* gnu/packages/crates-io.scm (rust-polars-lazy-0.16): New variable.
(rust-polars-lazy-0.15): Inherit from above.
2021-11-03 23:00:57 +01:00
0c5a066d5c
gnu: Add rust-polars-io-0.16.
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* gnu/packages/crates-io.scm (rust-polars-io-0.16): New variable.
(rust-polars-io-0.15): Inherit from above.
2021-11-03 23:00:57 +01:00
4bbb2248c4
gnu: Add rust-polars-core-0.16.
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* gnu/packages/crates-io.scm (rust-polars-core-0.16): New variable.
(rust-polars-core-0.15): Inherit from above.
2021-11-03 23:00:56 +01:00
Ricardo Wurmus
Thorsten Wilms
Brendan Tildesley
Tobias Geerinckx-Rice
Felix Gruber
Arun Isaac
Vinicius Monego
Efraim Flashner
Marius Bakke
Mark H Weaver
Nicolas Goaziou
Liliana Marie Prikler
Xinglu Chen
Aleksandr Vityazev
phodina
Julien Lepiller
Vagrant Cascadian
Kyle Meyer
Foo Chuan Wei
Morgan Smith
Leo Famulari