6a6a514ef4
gnu: Add r-ensdb-mmusculus-v79.
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* gnu/packages/bioconductor.scm (r-ensdb-mmusculus-v79): New variable.
2022-03-10 13:44:58 +01:00
2a55f99aff
home: symlink-manager: Rename "path" to "file" where appropriate.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script):
[home-path]: Rename to...
[home-directory]: ... this. Adjust users.
[backup-dir]: Rename to...
[backup-directory]: ... this. Adjust user.
[get-target-path]: Rename to...
[target-file]: ... this. Adjust users.
[get-backup-path]: Remove.
[backup-file]: Inline it.
[cleanup-symlinks](get-source-path): Rename to...
(source-file): ... this. Adjust users.
Rename 'he-path' to 'home' and 'new-he-path' to 'pivot'.
2022-03-10 11:43:15 +01:00
1fb6ef0473
home: symlink-manager: 'create-symlinks' uses 'file-system-fold'.
...
This removes the need for two intermediate representations of the file
tree.
* gnu/home/services/symlink-manager.scm (update-symlinks-script)
[simplify-file-tree, file-tree-traverse]: Remove.
[create-symlinks]: Rewrite in terms of 'file-system-fold'.
2022-03-10 11:43:14 +01:00
5fa188e92e
home: symlink-manager: 'cleanup-symlinks' uses 'file-system-fold'.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script)[cleanup-symlinks]:
Take a home generation and iterate over its config files directly with
'file-system-fold'. Adjuster caller accordingly. Remove 'old-tree'.
2022-03-10 11:43:14 +01:00
5fabaf1128
tests: Check 'guix home reconfigure' for a second generation.
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* tests/guix-home.sh: Invoke "guix home reconfigure" a second time with
a modify config file and check the result.
2022-03-10 11:43:14 +01:00
26e67e0280
tests: Simplify use of 'local-file' in 'tests/guix-home.sh'.
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* tests/guix-home.sh: Remove 'current-filename' trickery since
'local-file' resolves file names relative to the containing file.
2022-03-10 11:43:14 +01:00
7b7e32d5ad
tests: Make sure 'guix home reconfigure' backs up files.
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* tests/guix-home.sh: Create ~/.bashrc and ~/.config/test.conf prior to
'reconfigure' and check whether they were backed up.
2022-03-10 11:43:14 +01:00
a3a76a8384
home: symlink-manager: Avoid extra 'lstat' call.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script)[symlink-to-store?]:
Avoid extra 'lstat' call.
2022-03-10 11:43:14 +01:00
a81bb1e4bb
home: symlink-manager: Remove 'empty-directory?' and avoid TOCTTOU race.
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This removes three 'stat' syscalls.
* gnu/home/services/symlink-manager.scm (update-symlinks-script)[empty-directory?]:
Remove.
[cleanup-symlinks]: Replace use of 'file-exists?', 'file-is-directory?',
and 'empty-directory?' by a single 'rmdir' call.
2022-03-10 11:43:14 +01:00
e1b38046a6
home: symlink-manager: Use 'file-is-directory?'.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script)[directory?]:
Remove.
Change callers to use 'file-is-directory?' instead.
2022-03-10 11:43:13 +01:00
cf803b71c7
home: symlink-manager: Use 'for-each' when used for effects.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script)[cleanup-symlinks]
[create-symlinks]: Use 'for-each' instead of 'map'.
2022-03-10 11:43:13 +01:00
7a8856f540
home: symlink-manager: Move helper procedures as top-level defines.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script): Remove
'config-home', which is unused. Move 'home-path', 'backup-dir',
'get-target-path', 'get-backup-path', 'directory?', 'empty-directory?',
'symlink-to-store?', and 'backup-file' to the top level. Move
'create-symlinks' and 'cleanup-symlinks' to the top level as well, and
add parameters. Adjust callers.
2022-03-10 11:43:13 +01:00
66bf60a4cd
home: symlink-manager: Clarify module imports.
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* gnu/home/services/symlink-manager.scm (update-symlinks-script): Wrap
body in 'with-imported-modules'. Move (guix build utils) import to the
top. Move #$%initialize-gettext after definitions.
2022-03-10 11:43:13 +01:00
25afd66a81
gnu: gnome-sudoku: Remove input labels.
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* gnu/packages/gnome.scm (gnome-sudoku)[native-inputs]: Remove labels.
2022-03-10 11:43:13 +01:00
0cb05f4a06
gnu: gnome-sudoku: Add missing dependency on Python.
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* gnu/packages/gnome.scm (gnome-sudoku)[native-inputs]: Add PYTHON.
2022-03-10 11:43:13 +01:00
325136b8b1
gnu: gnome-arcade: Update to 0.240.
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* gnu/packages/emulators.scm (gnome-arcade): Update to 0.240.
2022-03-10 11:43:12 +01:00
13ff4ae5b1
maint: 'assert-binaries-available' only checks ci.guix.gnu.org.
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* Makefile.am (assert-binaries-available): Pass '--substitute-urls'.
2022-03-10 11:43:12 +01:00
cceb5344ae
gnu: gthumb: Fix build.
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* gnu/packages/gnome.scm (gthumb)[native-inputs]: Add python.
2022-03-10 10:46:27 +01:00
878578c0fa
services: bluetooth: Add missing config parameters.
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* doc/guix.texi (Desktop Services): Document 'bluetooth-service-type'
and 'bluetooth-configuration'.
* gnu/services/desktop.scm (<bluetooth-configuration>): Add many fields.
(bluetooth-configuration-file): Handle them.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-09 23:38:18 +01:00
fcebc4aa12
gnu: Add libtree.
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* gnu/packages/linux.scm (libtree): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-09 23:38:18 +01:00
eeac33a3de
gnu: Add osmium-tool.
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* gnu/packages/geo.scm (osmium-tool): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-09 23:38:18 +01:00
30daa0d972
gnu: libosmium: Update to 2.18.0.
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* gnu/packages/geo.scm (libosmium): Update to 2.18.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-03-09 23:38:18 +01:00
a208a4e923
system: hurd: Move the Shepherd before the Hurd in %BASE-PACKAGES/HURD.
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* gnu/system/hurd.scm (%base-packages/hurd): Move SHEPHERD before HURD.
2022-03-09 23:38:18 +01:00
a9a64c1983
gnu: hurd: Adjust to the transition from "--system" to "gnu.system".
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This is a followup to 0dc019e19a
2022-03-09 23:38:18 +01:00
e2ca8119d5
gnu: nyacc@1.00.2: Fix build.
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Fixes a regression introduced in
f15ca337be
2022-03-09 23:38:18 +01:00
d80c722034
gnu: slurm: Use gexps and remove input labels.
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* gnu/packages/parallel.scm (slurm)[source]: Remove trailing #t.
[native-inputs]: Remove labels.
[arguments]: Rewrite as gexps. Use 'this-package-input' instead of
'%build-inputs'.
(slurm-20.02)[arguments]: Adjust accordingly.
2022-03-09 23:38:17 +01:00
d3a7cd7acf
gnu: linux-libre 4.9: Update to 4.9.305.
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* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.305.
(linux-libre-4.9-pristine-source): Update hash.
2022-03-09 16:56:10 -05:00
a90ccf6a5e
gnu: linux-libre 4.14: Update to 4.14.270.
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* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.270.
(linux-libre-4.14-pristine-source): Update hash.
2022-03-09 16:56:10 -05:00
868d2c2eb9
gnu: linux-libre 4.19: Update to 4.19.233.
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* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.233.
(linux-libre-4.19-pristine-source): Update hash.
2022-03-09 16:56:09 -05:00
963114d3ba
gnu: linux-libre 5.4: Update to 5.4.183.
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.183.
(linux-libre-5.4-pristine-source): Update hash.
2022-03-09 16:56:09 -05:00
f4d1018c3d
gnu: linux-libre 5.10: Update to 5.10.104.
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* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.104.
(linux-libre-5.10-pristine-source): Update hash.
2022-03-09 16:56:09 -05:00
2cce5946e2
gnu: linux-libre: Update to 5.15.27.
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* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.27.
(linux-libre-5.15-pristine-source, deblob-scripts-5.15): Update hashes.
2022-03-09 16:56:09 -05:00
90c5fc18fe
gnu: linux-libre 5.16: Update to 5.16.13.
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* gnu/packages/linux.scm (linux-libre-5.16-version): Update to 5.16.13.
(linux-libre-5.16-pristine-source): Update hash.
2022-03-09 16:56:05 -05:00
48e049b38d
gnu: python-robotframework-sshlibrary: Normalize doc location.
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* gnu/packages/python-xyz.scm (python-robotframework-sshlibrary):
[phases]{build-and-install-doc}: Install HTML documentation to the share/doc
subdirectory of the 'doc' output.
2022-03-09 15:23:36 -05:00
ebd2093b32
gnu: python-robotframework: Fully build the documentation.
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* gnu/packages/patches/python-robotframework-ug2html.patch: New patch.
* gnu/local.mk: Register it.
* gnu/packages/python-xyz.scm (python-robotframework): Apply patch.
[modules]: New argument.
[phases]{build-and-install-doc}: Modify to build the full HTML documentation,
including the user guide.
[native-inputs]: Add python-pygments.
2022-03-09 15:23:36 -05:00
09aa025b44
gnu: Add python-trio-websocket.
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* gnu/packages/python-xyz.scm (python-trio-websocket): New variable.
2022-03-09 15:23:35 -05:00
edbf4f60e2
gnu: python-jedi: Remove optional test dependency on python-django-2.2.
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This avoids a dependency cycle between python-selenium (4.1.0) and
python-pytest-trio.
* gnu/packages/python-xyz.scm (python-jedi)[native-inputs]: Remove
python-django-2.2.
2022-03-09 15:23:35 -05:00
1a7424957d
gnu: python-robotframework-sshlibrary: Patch for RobotFramework 5 compatibility.
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* gnu/packages/patches/python-robotframework-sshlibrary-rf5-compat.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python-xyz.scm (python-robotframework-sshlibrary): Apply it.
2022-03-09 15:23:35 -05:00
67cb8e90c4
gnu: emacs-embark: Update to 0.16.
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* gnu/packages/emacs-xyz.scm (emacs-embark): Update to 0.16.
2022-03-09 21:15:48 +01:00
723ec40936
gnu: bombadillo: Improve package style.
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* gnu/packages/web-browsers.scm (bombadillo)[arguments]: Use G-expressions.
Remove trailing #T from phases.
2022-03-09 15:34:23 +01:00
9133700326
gnu: bombadillo: Update to 2.4.0.
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* gnu/packages/web-browsers.scm (bombadillo): Update to 2.4.0.
2022-03-09 15:33:21 +01:00
a88951a255
gnu: lagrange: Update to 1.11.1.
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* gnu/packages/web-browsers.scm (lagrange): Update to 1.11.1.
[inputs]: Add FREETYPE.
2022-03-09 15:31:12 +01:00
57aeaba02e
gnu: asymptote: Update to 2.79.
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* gnu/packages/plotutils.scm (asymptote): Update to 2.79.
2022-03-09 15:28:27 +01:00
53abcfb1c3
gnu: bzflag: Improve package style.
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* gnu/packages/games.scm (bzflag)[arguments]: Remove trailing #T from
phases. Use G-expressions.
2022-03-09 15:16:30 +01:00
f57d174a51
gnu: bzflag: Update to 2.4.24.
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* gnu/packages/games.scm (bzflag): Update to 2.4.24.
2022-03-09 15:03:11 +01:00
e3e2da97ba
gnu: emacs-add-node-modules-path: Update to 1.3.0.
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* gnu/packages/emacs-xyz.scm (emacs-add-node-modules-path): Update to 1.3.0.
2022-03-09 14:47:28 +01:00
92884b4061
gnu: emacs-geiser: Update to 0.23.
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* gnu/packages/emacs-xyz.scm (emacs-geiser): Update to 0.23.
2022-03-09 14:45:29 +01:00
0758167483
gnu: emacs-vertico: Update to 0.21.
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* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.21.
2022-03-09 14:17:04 +01:00
1d7b1128ca
gnu: emacs-corfu: Update to 0.20.
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* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.20.
2022-03-09 14:16:59 +01:00
ca588fdfde
gnu: Add r-scopeloomr.
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* gnu/packages/bioinformatics.scm (r-scopeloomr): New variable.
2022-03-09 11:35:59 +01:00
Ricardo Wurmus
Ludovic Courtès
Mathieu Othacehe
Demis Balbach
Artyom V. Poptsov
Nikolay Korotkiy
Nikolay Korotkiy
Leo Famulari
Maxim Cournoyer
Nicolas Goaziou