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2148 Commits (7282f9496793227d7ac6f902976aecb663068ec1)

Author SHA1 Message Date
Jakob L. Kreuze fa9edf09e9
gnu: Add machine type for deployment specifications.
* gnu/machine.scm: New file.
* gnu/machine/ssh.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-07-06 02:10:04 -04:00
Arun Isaac e48f80cba0
gnu: Add qlogo.
* gnu/packages/logo.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
* gnu/packages/logo.scm (qlogo): New variable.
2019-07-05 12:49:25 +05:30
Marius Bakke 0d75c64d78
gnu: glib-networking: Update to 2.60.3.
* gnu/packages/gnome.scm (glib-networking): Update to 2.60.3.
[source](patches): Remove.
[arguments]<#:phases>: Remove.
* gnu/packages/patches/glib-networking-connection.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-07-03 00:19:46 +02:00
Marius Bakke e7a42c4abb
gnu: boost: Remove GCC5 workaround.
* gnu/packages/patches/boost-fix-icu-build.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/boost.scm (boost)[source](patches): Remove.
[arguments]: Do not pass "cxxflags".
2019-07-02 21:17:53 +02:00
Marius Bakke 4fb9165515
Merge branch 'staging' into core-updates 2019-07-02 20:18:16 +02:00
Marius Bakke 8b5df106fd
gnu: WebKitGTK: Update to 2.24.3.
* gnu/packages/webkit.scm (webkitgtk-2.24): Update to 2.24.3.
[source](patches): Remove.
* gnu/packages/patches/webkitgtk-sans-gstreamer-gl.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-07-02 17:27:13 +02:00
Marius Bakke 5f3f703918
gnu: glibc: Update to 2.29.
* gnu/packages/patches/glibc-bootstrap-system.patch,
gnu/packages/patches/glibc-supported-locales.patch: Adjust for glibc 2.29.
* gnu/packages/patches/glibc-2.28-supported-locales.patch,
gnu/packages/patches/glibc-CVE-2019-7309.patch,
gnu/packages/patches/glibc-CVE-2019-9169.patch,
gnu/packages/patches/glibc-2.29-git-updates.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (glibc): Update to 2.29.
[source](patches): Add 'glibc-CVE-2019-7309.patch',
'glibc-CVE-2019-9169.patch', and 'glibc-2.29-git-updates.patch'.  Remove
'glibc-hurd-magic-pid.patch'.
[native-inputs]: Add PYTHON-MINIMAL.
(glibc-2.28): New public variable.
* gnu/packages/commencement.scm (expat-sans-tests, python-boot0): New variables.
(glibc-final-with-bootstrap-bash)[native-inputs]: Add PYTHON-BOOT0.
* gnu/packages/python.scm (python-3.7)[arguments]: Disable test that fails
with glibc 2.29.
2019-07-02 16:45:17 +02:00
Marius Bakke 61f34ae5bb
gnu: libssh2: Update to 1.9.0.
* gnu/packages/patches/libssh2-fix-build-failure-with-gcrypt.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/ssh.scm (libssh2): Update to 1.9.0.
[source](patches): Remove.
2019-06-30 17:06:42 +02:00
Marius Bakke 55d1d9eb2f
gnu: gstreamer: Fix buffer offset problem.
* gnu/packages/patches/gstreamer-buffer-reset-offset.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gstreamer)[source](patches): New field.
[arguments]: Do not disable any tests.
2019-06-29 23:17:13 +02:00
Ivan Petkov f309420b2d
gnu: rust: remove debug-info patch thanks to newer gdb version
* gnu/local.mk: (dist_patch_DATA): Delete
%D%/packages/patches/rust-1.30-gdb-llvm.patch
* gnu/packages/rust.scm: (rust-1.30): Delete patch overrides.
(rust-1.31): Delete patch overrides.
2019-06-28 18:31:47 -07:00
Ludovic Courtès 5cc1075a76
Merge branch 'master' into core-updates 2019-06-27 23:33:48 +02:00
Guillaume LE VAILLANT 072e986ec8
gnu: Add gramps
* gnu/packages/genealogy.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-26 15:59:58 +02:00
Guillaume LE VAILLANT fbfc07bd86
gnu: Add leela-zero.
* gnu/packages/games.scm (leela-zero): New variable.
* gnu/packages/patches/leela-zero-gtest.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-25 17:41:24 +02:00
Julien Lepiller b95af3f6ab
gnu: python-pyatspi: Fix loading libraries.
* gnu/package/gnome.scm (python-pyatspi): Fix loading dependencies.
2019-06-22 17:21:06 +02:00
Marius Bakke 8bdacad26b
gnu: libcroco: Update to 0.6.13.
* gnu/packages/patches/libcroco-CVE-2017-7960.patch,
gnu/packages/patches/libcroco-CVE-2017-7961.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gnome.scm (libcroco): Update to 0.6.13.
[source](patches): Remove.
2019-06-21 14:54:28 +02:00
Ricardo Wurmus b556abe416
gnu: khmer: Update to 3.0.0a3.
* gnu/packages/bioinformatics.scm (khmer): Update to 3.0.0a3.
[source]: Remove patch; remove seqan in snippet.
[inputs]: Add seqan-1.
* gnu/packages/patches/khmer-use-libraries.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-21 11:41:54 +02:00
Andreas Enge fedb9571eb
gnu: Add lcalc.
* gnu/packages/sagemath.scm (lcalc): New variable.
* gnu/packages/patches/lcalc-default-parameters-1.patch,
gnu/packages/patches/lcalc-default-parameters-2.patch,
gnu/packages/patches/lcalc-lcommon-h.patch,
gnu/packages/patches/lcalc-using-namespace-std.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register patches.
2019-06-21 09:28:07 +02:00
Andreas Enge 88f913e8ad
gnu: lrcalc: Add a patch for identifying include files.
* gnu/packages/patches/lrcalc-includes.patch: New file.
* gnu/packages/algebra.scm (lrcalc): Use patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
2019-06-21 09:28:07 +02:00
Ricardo Wurmus d0b19e445c
gnu: libgdata: Update to 0.17.9.
* gnu/packages/gnome.scm (libgdata): Update to 0.17.9.
[inputs]: Move glib, json-glib, and libsoup from here...
[propagated-inputs]: ...to here.
* gnu/packages/patches/libgdata-fix-tests.patch: Remove file.
* gnu/packages/patches/libgdata-glib-duplicate-tests.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Remove patches.
2019-06-20 23:24:38 -04:00
Ricardo Wurmus b74ef0bae7
gnu: gdm: Update to 3.30.2.
* gnu/packages/gnome.scm (gdm): Update to 3.30.2.
[arguments]: Add --with-udevdir configure flag.
[source]: Remove patch.
* gnu/packages/patches/gdm-CVE-2018-14424.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-20 23:24:37 -04:00
Marius Bakke a9a78d8bfb
gnu: dbus: Update to 1.12.16.
* gnu/packages/patches/dbus-CVE-2019-12749.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/glib.scm (dbus): Update to 1.12.16.
[replacement]: Remove.
(dbus/fixed): Remove variable.
2019-06-20 23:40:52 +02:00
Marius Bakke 6cb1ef9ea2
Merge branch 'staging' into core-updates 2019-06-20 23:38:56 +02:00
Marius Bakke 377bd155ea
gnu: dbus: Fix CVE-2019-12749.
* gnu/packages/patches/dbus-CVE-2019-12749.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/glib.scm (dbus)[replacement]: New field.
(dbus/fixed): New variable.
2019-06-20 22:49:31 +02:00
Nicolas Goaziou 75a73bb024
gnu: Add symmetrica.
* gnu/packages/algebra.scm (symmetrica): New variable.
* gnu/packages/patches/symmetrica-bruch.patch:
* gnu/packages/patches/symmetrica-int32.patch:
* gnu/packages/patches/symmetrica-return_values.patch:
* gnu/packages/patches/symmetrica-sort_sum_rename.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add patches.
2019-06-20 10:19:12 +02:00
Brian Leung 8785a71faf
gnu: emacs-unpackaged-el: Add patch for missing require statement.
* gnu/packages/emacs-xyz.scm (emacs-unpackaged-el)[source]: Add patch.
* gnu/packages/patches/emacs-unpackaged-req.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-19 22:56:27 +02:00
Nicolas Goaziou 0c842e3a59
gnu: Add ratpoints.
* gnu/packages/maths.scm (ratpoints): New variable.
* gnu/packages/patches/ratpoints-sturm_and_rp_private.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.
2019-06-19 21:43:12 +02:00
Ludovic Courtès 123b9c02dd
gnu: open-zwave: Unbundle hidapi.
* gnu/packages/patches/open-zwave-hidapi.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/zwave.scm (open-zwave)[source](patches): New field.
(snippet): Delete 'cpp/hidapi'.
[native-inputs]: Add PKG-CONFIG.
[inputs]: Add HIDAPI.
2019-06-17 12:36:13 +02:00
Tobias Geerinckx-Rice 10a3297389
gnu: dstat: Add two patches, fix two bugs.
* gnu/packages/admin.scm (dstat)[source]: Add patches.
* gnu/packages/patches/dstat-fix-crash-when-specifying-delay.patch,
gnu/packages/patches/dstat-skip-devices-without-io.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-06-16 19:44:42 +02:00
Marius Bakke 1a753d5673
gnu: poppler: Update to 0.77.0.
* gnu/packages/patches/inkscape-poppler-0.76.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/inkscape.scm (inkscape)[source](patches): New field.
* gnu/packages/patches/texlive-bin-luatex-poppler-compat.patch: Add two new hunks.
* gnu/packages/pdf.scm (poppler): Update to 0.77.0.
* gnu/packages/tex.scm (texlive-bin)[source]: Update Arch patches.
[arguments]: Adjust accordingly.
* gnu/packages/scribus.scm (scribus)[source](patches): Add two new origins.
2019-06-15 23:47:34 +02:00
Marius Bakke 549f4091c1
gnu: libarchive: Update to 3.4.0.
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch,
gnu/packages/patches/libarchive-CVE-2018-1000878.patch,
gnu/packages/patches/libarchive-CVE-2018-1000880.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/backup.scm (libarchive): Update to 3.4.0.
[source](uri): Add alternative download location.
[source](patches): Remove.
2019-06-15 23:47:34 +02:00
Marius Bakke c7fbf61865
gnu: Remove leftover patch.
This is a follow-up to commit d680a8afd1.

* gnu/packages/patches/inkscape-poppler-compat3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-15 09:42:12 +02:00
Gábor Boskovits 4c7e8c234d
gnu: Add benchmark.
* gnu/packages/benchmark.scm(benchmark): New variable.
* gnu/packages/patches/benchmark-unbundle-googletest.patch: New file.
* gnu/local.mk(dist_patch_DATA): Add it.
2019-06-14 23:18:12 +02:00
Ludovic Courtès 92d00ca466
build: Remove 'gnu/packages/bootstrap' and its binaries.
* gnu/local.mk (bootstrapdir, bootstrap_i686_linuxdir)
(bootstrap_armhf_linuxdir, bootstrap_aarch64_linuxdir)
(bootstrap_mips64el_linuxdir, dist_bootstrap_i686_linux_DATA)
(dist_bootstrap_armhf_linux_DATA, dist_bootstrap_aarch64_linux_DATA)
(dist_bootstrap_mips64el_linux_DATA): Remove.
(set-bootstrap-executable-permissions): Remove target.
* Makefile.am (install-data-hook): Remove dependency on
'set-bootstrap-executable-permissions'.
* gnu/packages/bootstrap: Remove directory.
* tests/search-paths.scm ("evaluate-search-paths, separator is #f"):
Adjust to match .../aux-files/linux-libre.
2019-06-14 22:09:38 +02:00
Carl Dong 44f07d1dc6
gnu: guile: Disable unreliable out-of-memory test
* gnu/packages/patches/guile-2.2-skip-oom-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/guile.scm (guile-2.2)[source](patches): Add
  "guile-2.2-skip-oom-test.patch".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-14 09:46:49 +02:00
Marius Bakke f388f4a568
Merge branch 'staging' 2019-06-13 15:27:30 +02:00
Nicolas Goaziou 3745909dc9
gnu: Add ri-li.
* gnu/packages/games.scm (ri-li): New variable.
* gnu/packages/patches/ri-li-modernize_cpp.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.
2019-06-13 13:59:58 +02:00
Ludovic Courtès d9bbfe042e
Merge branch 'master' into core-updates 2019-06-13 13:24:35 +02:00
Carlo Zancanaro 47f2168b6f
gnu: Add Kawa.
* gnu/packages/kawa.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-06-13 13:00:37 +02:00
Brian Leung 0882c491f0
gnu: emacs-realgud: Update to 1.5.0.
* gnu/packages/emacs-xyz.scm (emacs-realgud): Update to 1.5.0.
[source]: Fetch from git.
Remove upstreamed patch.
* gnu/packages/patches/emacs-realgud-fix-configure-ac.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-13 13:00:37 +02:00
Florian Pelz bd9b15fb31
gnu: Add USB_ModeSwitch.
* gnu/packages/usb-modeswitch.scm: New file.
* gnu/packages/patches/usb-modeswitch-accept-config-arg.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add package.
  (dist_patch_DATA): Add patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-13 00:44:01 +02:00
Ivan Petkov cb2471f726
gnu: crate: Add unicode-xid.
* gnu/local.mk: (GNU_SYSTEM_MODULES): Add packages/crates-io.scm.
* gnu/packages/crates-io.scm: New file, containing unicode-xid.

Signed-off-by: Chris Marusich <cmmarusich@gmail.com>
2019-06-11 18:05:44 -07:00
Marius Bakke 58bf51b4c0
Merge branch 'master' into staging 2019-06-11 10:27:09 +02:00
Oleg Pykhalov 47b9614b31
services: Add 'nix-service-type'.
* gnu/services/nix.scm: New file.
* gnu/local.mk: Add this.
* doc/guix.texi (Miscellaneous Services): Document this.
2019-06-10 09:15:45 +03:00
Tobias Geerinckx-Rice c447eb4d1d
gnu: Restore allegro-mesa-18.2.5-and-later.patch.
Dropped in 49405aaf5c, it's still in use
by the (leaf) allegro-5.0 package.

* gnu/packages/patches/allegro-mesa-18.2.5-and-later.patch: Newish file.
* gnu/local.mk (dist_patch_DATA): Re-add it.
2019-06-10 01:26:50 +02:00
Marius Bakke 69ecd666d7
Merge branch 'master' into staging 2019-06-09 00:57:36 +02:00
Tobias Geerinckx-Rice 49405aaf5c
gnu: allegro: Update to 5.2.5.0.
* gnu/packages/game-development.scm (allegro): Update to 5.2.5.0.
[source]: Remove patch.
* gnu/packages/patches/allegro-mesa-18.2.5-and-later.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-08 02:30:25 +02:00
Ludovic Courtès 15ec93a783
Add (gnu build locale).
* gnu/build/locale.scm: New file.
* gnu/local.mk (MODULES_NOT_COMPILED): Add it.
* gnu/installer/locale.scm (normalize-codeset): Remove.
* gnu/system/locale.scm (localedef-command): Remove.
(single-locale-directory): Use (gnu build locale).
(glibc-supported-locales)[build]: Likewise, and remove
'read-supported-locales'.
2019-06-07 21:50:18 +02:00
Ludovic Courtès 08814aec6a
services: Add Singularity.
* gnu/packages/linux.scm (singularity)[source](snippet): Change file
name of setuid helpers in libexec/cli/*.exec.
[arguments]: Remove "--disable-suid".
* gnu/services/docker.scm (%singularity-activation): New variable.
(singularity-setuid-programs): New procedure.
(singularity-service-type): New variable.
* gnu/tests/singularity.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document it.
2019-06-07 09:57:19 +02:00
Danny Milosavljevic 07023ebc18
services: Add auditd.
* gnu/services/auditd.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document it.
2019-06-06 22:23:35 +02:00
Marius Bakke d4721ff101
Merge branch 'master' into staging 2019-06-05 19:46:16 +02:00
Marius Bakke 3588419553
gnu: polkit: Update to 0.116 [fixes CVE-2019-6133].
* gnu/packages/patches/polkit-CVE-2018-19788.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/polkit.scm (polkit): Update to 0.116.
[source](patches): Remove.
[inputs]: Change MOZJS-52 to MOZJS-60.
[arguments]: Add CXXFLAGS=-std=gnu++11 to #:configure-flags.
2019-06-05 00:37:39 +02:00
Tobias Geerinckx-Rice d46fc636e6
gnu: borg: Update to 1.1.10.
* gnu/packages/backup.scm (borg): Update to 1.1.10.
[source]: Remove upstreamed patch.
Remove msgpack and broken references to it.
[arguments]: Add ‘use-system-msgpack’ phase.
* gnu/packages/patches/borg-fix-hard-link-preloading.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-04 22:19:33 +02:00
Marius Bakke d3e3a6adcd
gnu: Remove libevent@2.0.
* gnu/packages/patches/libevent-2.0-CVE-2016-10195.patch,
gnu/packages/patches/libevent-2.0-CVE-2016-10196.patch,
gnu/packages/patches/libevent-2.0-CVE-2016-10197.patch,
gnu/packages/patches/libevent-2.0-evbuffer-add-use-last-with-datap.patch,
gnu/packages/patches/libevent-dns-tests.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libevent.scm (libevevent-2.0): Remove variable.
2019-06-03 22:28:48 +02:00
Marius Bakke 30e12b9664
Merge branch 'master' into staging 2019-06-03 17:03:56 +02:00
Guillaume LE VAILLANT a0c3a2e3a1
gnu: Add txr.
* gnu/packages/lisp.scm (txr): New variable.
* gnu/packages/patches/txr-shell.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-01 15:26:30 +02:00
Vasile Dumitrascu d4cb92e707
gnu: gnucash: Update to 3.5.
* gnu/packages/gnucash.scm (gnucash): Update to 3.5.
[source]: Remove unneeded patch.
* gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2019-05-31 23:06:10 -04:00
Christopher Baines f6b0e1f8ff
services: Add getmail.
Getmail is a mail retriever written in Python, this commit adds a service-type
to run getmail. I'm looking at this, as it's a convinient way of getting
mailing list messages in to Patchwork.

I initially tried putting this in the (gnu services mail) module, but due to
also trying to use the define-configuration pattern, it conflicted with the
dovecot service.

* gnu/services/getmail.scm: New file.
* gnu/local.mk: Add it.
* gnu/tests/mail.scm (%getmail-os, %test-getmail): New variables.
(run-getmail-test): New procedure.
2019-05-31 20:22:20 +01:00
Julien Lepiller db6dd04c3d
gnu: gtksourceview-2: Fix finding default data.
* gnu/packages/patches/gtksourceview-2-add-default-directory.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtksourceview-2)[source]: Use it.
2019-05-31 14:41:38 +02:00
Marius Bakke 0d3dbe3f56
gnu: libevent: Update to 2.1.0.
* gnu/packages/patches/libevent-2.1-dns-tests.patch,
gnu/packages/patches/libevent-2.1-skip-failing-test.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libevent.scm (libevent): Update to 2.1.10.
[source](patches): Remove.
2019-05-26 19:48:39 +02:00
Kei Kebreau 8698d986db
gnu: supertux: Update to 0.6.0.
* gnu/packages/games.scm (supertux): Update to 0.6.0.
[source]: Add patches.
[arguments]: Add -DUSE_SYSTEM_PHYSFS=ON. Add 'patch-squirrel-path' phase.
[inputs]: Add freetype and squirrel.
* gnu/packages/patches/supertux-fix-build-with-gcc5.patch,
gnu/packages/patches/supertux-unbundle-squirrel.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-05-24 21:00:15 -04:00
Marius Bakke bb9dec546f
gnu: gawk: Update to 5.0.0.
* gnu/packages/patches/libgpg-error-gawk-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (libgpg-error)[source](modules, patches): New fields.
* gnu/packages/gawk.scm (gawk): Update to 5.0.0.
2019-05-25 00:47:54 +02:00
Marius Bakke 57df83e07d
Merge branch 'staging' into core-updates 2019-05-25 00:25:15 +02:00
Marius Bakke ab43d1f827
gnu: at-spi2-core: Update to 2.32.1.
* gnu/packages/patches/at-spi2-core-meson-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (at-spi2-core): Update to 2.32.1.
[source](patches): Remove.
2019-05-24 23:28:30 +02:00
Marius Bakke ddb4062784
Merge branch 'master' into staging 2019-05-24 22:44:51 +02:00
Marius Bakke 9d0c291e3e
gnu: Move Sphinx and friends to (gnu packages sphinx).
* gnu/packages/python-xyz.scm (python-sphinxcontrib-websupport,
python2-sphinxcontrib-websupport, python-sphinx, python2-sphinx,
python-sphinx-gallery, python2-sphinx-gallery, python-sphinx-rtd-theme,
python2-sphinx-rtd-theme, python-guzzle-sphinx-theme,
python2-guzzle-sphinx-theme, python-sphinxcontrib-newsfeed,
python-sphinxcontrib-programoutput, python2-sphinxcontrib-programoutput,
python-sphinx-repoze-interface, python2-sphinx-repoze-interface,
python-sphinx-cloud-sptheme, python2-sphinx-cloud-sptheme,
python-sphinx-alabaster-theme, python2-sphinx-alabaster-theme,
python-sphinx-me, python-sphinxcontrib-svg2pdfconverter): Move to ...
(gnu):
* gnu/packages/sphinx.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/admin.scm, gnu/packages/bioinformatics.scm,
gnu/packages/calendar.scm, gnu/packages/cluster.scm,
gnu/packages/databases.scm, gnu/packages/dav.scm, gnu/packages/disk.scm,
gnu/packages/django.scm, gnu/packages/elf.scm, gnu/packages/emacs-xyz.scm,
gnu/packages/emulators.scm, gnu/packages/finance.scm, gnu/packages/image.scm,
gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm,
gnu/packages/openstack.scm, gnu/packages/pdf.scm, gnu/packages/python-web.scm,
gnu/packages/search.scm, gnu/packages/statistics.scm,
gnu/packages/storage.scm, gnu/packages/sync.scm, gnu/packages/terminals.scm,
gnu/packages/tls.scm, gnu/packages/web.scm: Adjust module imports.
2019-05-24 21:54:31 +02:00
Andy Tai 39d655f8cf
gnu: Add squirrel.
* gnu/packages/squirrel.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-05-22 21:36:45 -04:00
Marius Bakke 8308f0ba9e
gnu: webkitgtk: Update to 2.24.2 [security fixes].
This fixes CVE-2019-8595, CVE-2019-8607, and CVE-2019-8615.

* gnu/packages/patches/webkitgtk-sse2.patch: Delete file.
* gnu/packages/patches/webkitgtk-sans-gstreamer-gl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/webkit.scm (webkitgtk-2.24): Update to 2.24.2.
[source](patches): Add the new patch; remove 'webkitgtk-sse2.patch'.
2019-05-21 17:25:54 +02:00
Ludovic Courtès 758ffc234d
gnu: Add OpenZWave.
* gnu/packages/zwave.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-05-20 23:23:01 +02:00
Tobias Geerinckx-Rice 0f469c172e
gnu: xf86-video-voodoo: Ship patch locally.
The ORIGIN patch has been modified in place, probably *wild guessing
sounds* by a server-side cgit update.

* gnu/packages/xorg.scm (xf86-video-voodoo)[source]: Use SEARCH-PATCHES.
* gnu/packages/patches/xf86-video-voodoo-pcitag.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-05-20 05:02:26 +02:00
Danny Milosavljevic 1d86b05618
vm: Create installation media with MBR and HFS only, no GPT.
* gnu/build/vm.scm (make-iso9660-image): Accept XORRISO,
GRUB-MKRESCUE-ENVIRONMENT.
* gnu/system/vm.scm (iso9660-image): Pass XORRISO; accept
GRUB-MKRESCUE-ENVIRONMENT.
(system-disk-image): Pass GRUB-MKRESCUE-ENVIRONMENT.
* gnu/packages/patches/xorriso-no-mbr-in-inner-efi.patch: New file.
* gnu/packages/patches/xorriso-no-partition-table-in-inner-efi.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/cdrom.scm (xorriso)[source]: Add patches.
[arguments]<#:phases>[install-frontends]:
Add phase.
2019-05-18 18:35:37 +02:00
Leo Famulari 08eafef865
gnu: Borg: Fix a hang in the test suite.
* gnu/packages/patches/borg-fix-hard-link-preloading.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/backup.scm (borg)[source]: Use it.
2019-05-17 07:57:55 -04:00
Tobias Geerinckx-Rice c72c10053d
gnu: bind: Update to 9.14.2.
* gnu/packages/dns.scm (isc-bind): Update to 9.14.2.
[source]: Remove patch.
[arguments]: Run only fuzz tests.
* gnu/packages/patches/bind-fix-unused-pk11-ecc-constants.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-05-16 18:21:50 +02:00
Julien Lepiller 3617d4f913
gnu: ocaml-base64: Update to 3.2.0.
* gnu/packages/ocaml.scm (ocaml-base64): Update to 3.2.0.
[origin]: Use git-fetch.
(ocaml-piqilib)[origin]: Add a patch to fix building with new
versions of ocaml-base64.
* gnu/packages/patches/ocaml-piqilib-Update-base64.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-05-14 21:05:32 +02:00
Ludovic Courtès 76269f6bc4
installer: Use 'glibc-supported-locales'.
The list of locales supported by glibc is now built from source.

* gnu/installer/locale.scm (locale-string->locale): Add optional
'codeset' parameter and honor it.
(supported-locales->locales): Rewrite to 'read' from SUPPORTED-LOCALES.
* gnu/installer.scm (compute-locale-step): Pass the result of
'glibc-supported-locales' instead of the "aux-files/SUPPORTED" file.
* gnu/installer/aux-files/SUPPORTED: Remove.
* gnu/local.mk (dist_installer_DATA): Remove it.
2019-05-13 23:46:08 +02:00
Ricardo Wurmus d13f3a033e
gnu: gnome-tweak-tool: Update to 3.28.1.
Fixes <https://bugs.gnu.org/35597>.

* gnu/packages/gnome.scm (gnome-tweak-tool): Deprecate and rename...
(gnome-tweaks): ...to this.  Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Adjust configure flags; pass glib-or-gtk? flag; remove custom
phases that are now provided by the meson-build-system; add phases "wrap" and
"wrap-gi-typelib".
[native-inputs]: Remove meson-for-build and ninja.
[home-page]: Update.
[description]: Use "Tweaks" instead of "Tweak Tool".
* gnu/packages/patches/gnome-tweak-tool-search-paths.patch: Rename file...
* gnu/packages/patches/gnome-tweaks-search-paths.patch: ...to this.
* gnu/local.mk (dist_patch_DATA): Update patch file name.
2019-05-10 13:31:32 +02:00
Efraim Flashner 3ec29587b5
gnu: efl: Update to 1.22.2.
* gnu/packages/enlightenment.scm (efl): Update to 1.22.2.
[propagated-inputs]: Move libsndfile, pulseaudio ...
[inputs]: ... to here.
[source]: Remove patch.
* gnu/packages/patches/efl-mesa-compat.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-05-08 19:55:12 +03:00
Diego Nicola Barbato 6426a8fb6c
gnu: slim: Allow customisation of Xorg display.
Previously SLiM could only start on display :0.0.  This change makes it
possible to run multiple instances of SLiM at the same time.

* gnu/packages/patches/slim-display.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/display-managers.scm (slim): Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-07 15:46:54 +02:00
Carl Dong 0e293f75f1
gnu: gcc@9: Fix limits.h include for cross builds.
This allows us to supply gcc-9 as an optional argument to cross-gcc,
successfully constructing gcc-9-based cross-compilers.

* gnu/packages/gcc.scm (gcc-9)[source](patches): Add
  "gcc-9-asan-fix-limits-include.patch".
* gnu/packages/patches/gcc-9-asan-fix-limits-include.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-06 10:22:00 +02:00
Carl Dong 83b0a7f41b
gnu: cross-base: Apply gcc 8 patch to gcc >= 8.
* gnu/packages/cross-base.scm (cross-gcc): Apply gcc 8 patch to gcc >= 8.
* gnu/packages/patches/gcc-8-cross-environment-variables.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-06 10:21:38 +02:00
Carl Dong bdfc327639
gnu: gcc: Add 9.1.0.
* gnu/packages/gcc.scm (gcc-9): New variable.
* gnu/packages/commencement.scm (gcc-toolchain-9): New variable.
* gnu/packages/patches/gcc-9-strmov-store-file-names.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-06 10:18:15 +02:00
Brendan Tildesley cbe399e736
gnu: calibre: Disable sqlite test.
* gnu/packages/patches/calibre-remove-test-sqlite.patch: New file.
* gnu/packages/ebook.scm (calibre)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley f89f5abada
gnu: calibre: Disable bs4 test.
* gnu/packages/patches/calibre-remove-test-bs4.patch: New file.
* gnu/packages/ebook.scm (calibre)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 15871b4087
gnu: calibre: Remove unrar test.
* gnu/packages/patches/calibre-remove-test-unrar.patch: New file.
* gnu/packages/ebook.scm (calibre)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 4e6f8a1442
gnu: calibre: Update to 3.41.3.
* gnu/packages/ebook.scm (calibre): Update to 3.41.3.
[inputs]: Replace python2-cssutils by python2-css-parser.
[snippet]: Modify.
* gnu/packages/patches/calibre-use-packaged-feedparser.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:19 +02:00
Marius Bakke c9c63edbde
gnu: gstreamer: Update to 1.16.0.
* gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-bad,
gst-plugins-ugly, python-gst): Update to 1.16.0.
(gst-plugins-good): Likewise.
[source](patches): Remove.
[arguments]: Remove #:make-flags.
(gst-libav): Update to 1.16.0.
[inputs]: Change FFMPEG-3.4 to FFMPEG.
* gnu/packages/patches/gst-plugins-good-libvpx-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-05-04 16:53:48 +02:00
Marius Bakke 3b458d5462
Merge branch 'master' into core-updates 2019-05-01 23:11:41 +02:00
Vagrant Cascadian 6b99afeef8
gnu: u-boot: Update to 2019.04.
* gnu/packages/bootloaders.scm (u-boot): Update to 2019.04.
[source]: Add patch.
(u-boot-novena): Update dynamic patch to handle config key rename.
(u-boot-am335x-evm): New variable.
(u-boot-am335x-boneblack): Build with modified am335x-evm config.
(u-boot-novena): Fix typo in description.
* gnu/bootloader/u-boot.scm (u-boot-beaglebone-black-bootloader): Use
u-boot-am335x-boneblack.
* gnu/packages/patches/u-boot-fix-mkimage-header-verification.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-29 12:35:04 +02:00
Ludovic Courtès 7d62fa206b
Merge branch 'staging' 2019-04-28 14:45:35 +02:00
Tobias Geerinckx-Rice 55036ddc9a
gnu: soundtouch: Update to 2.1.1.
* gnu/packages/audio.scm (soundtouch): Update to 2.1.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
Remove patches.
* gnu/packages/patches/soundtouch-CVE-2018-1000223.patch,
gnu/packages/patches/soundtouch-CVE-2018-14044-14045.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2019-04-26 00:56:32 +02:00
Chris Marusich 968e86bd93
gnu: Add python-pyfakefs and python2-pyfakefs.
* gnu/packages/patches/python-pyfakefs-remove-bad-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.
* gnu/packages/check.scm (python-pyfakefs, python2-pyfakefs): New
  variables.
2019-04-24 21:08:36 -07:00
Tobias Geerinckx-Rice 0406434baa
gnu: bind: Update to 9.12.4-P1 [fixes CVE-2018-5743, CVE-2019-6467].
* gnu/packages/dns.scm (isc-bind): Update to 9.12.4-P1.
[source]: Add patch.
[inputs]: Add python and python-ply.
* packages/patches/bind-fix-unused-pk11-ecc-constants.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-25 04:42:17 +02:00
Marius Bakke 37da4fbe15
Merge branch 'master' into staging 2019-04-23 19:43:59 +02:00
Mark H Weaver fa61900705
gnu: openssh: Update to 8.0p1.
* gnu/packages/ssh.scm (openssh): Update to 8.0p1.
[source]: Remove patch.
* gnu/packages/patches/openssh-CVE-2018-20685.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-04-22 15:02:16 -04:00
Ludovic Courtès 1b0b1651b1
gnu: mtools: 'mformat' initializes boot sector before writing it.
This is the last bit fixing <https://bugs.gnu.org/35283>.

Previously, 'mformat' (used by 'grub-mkrescue') would pass uninitialized
bytes to write(2), leading to non-deterministic FAT image contents.
This patch fixes that.

* gnu/packages/patches/mtools-mformat-uninitialized.patch: New file.
* gnu/packages/mtools.scm (mtools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-21 00:51:19 +02:00
Ludovic Courtès 52b5fe5bcf
gnu: grub: 'grub-mkrescue' honors 'GRUB_FAT_SERIAL_NUMBER'.
* gnu/packages/patches/grub-efi-fat-serial-number.patch: New file.
* gnu/packages/bootloaders.scm (grub)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-21 00:51:18 +02:00
Maxim Cournoyer b979028527
gnu: Add python-robotframework.
* gnu/packages/python-xyz.scm (python-robotframework): New variable.
* gnu/packages/patches/python-robotframework-honor-source-date-epoch.patch:
Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-04-19 20:27:27 -04:00
Ludovic Courtès 60ecacdeaa
gnu: linkchecker: Shorten patch file name.
This file name was too long for 'tar', as reported by 'guix lint'.

* gnu/packages/patches/linkchecker-mark-more-tests-that-require-the-network.patch:
Rename to...
* gnu/packages/patches/linkchecker-tests-require-network.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/web.scm (linkchecker)[source]: Likewise.
2019-04-19 17:46:40 +02:00
Ludovic Courtès 30a6cd7cd0
gnu: ocaml-dose3: Shorten patch file name.
This file name was too long for 'tar', as reported by 'guix lint'.

* gnu/packages/patches/ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch:
Rename to...
* gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ocaml.scm (ocaml-dose3)[source]: Adjust accordingly.
2019-04-19 17:46:40 +02:00
Marius Bakke f5961dd585
Merge branch 'master' into staging 2019-04-17 00:08:34 +02:00
Marius Bakke e28ff04108
gnu: webkitgtk: Fix build on i686.
Fixes <https://bugs.gnu.org/35232>.

* gnu/packages/patches/webkitgtk-sse2.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/webkit.scm (webkitgtk-2.24)[source](patches): New field.
2019-04-16 23:39:49 +02:00
Julien Lepiller bcfb110f6d
gnu: Add poedit.
* gnu/packages/poedit.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-04-16 22:32:27 +02:00
Tobias Geerinckx-Rice eea75c435a
gnu: quilt: Update to 0.66.
* gnu/packages/patchutils.scm (quilt): Update to 0.66.
[source]: Remove all patches.
* gnu/packages/patches/quilt-test-fix-regex.patch,
gnu/packages/patches/quilt-getopt-nondigit-param.patch,
gnu/packages/patches/quilt-getopt-second-separator.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2019-04-15 11:00:13 +02:00
Tobias Geerinckx-Rice e41ddf7605
gnu: knot: Update to 2.8.1.
* gnu/packages/dns.scm (knot): Update to 2.8.1.
[source]: Remove patch.
* gnu/packages/patches/knot-include-system-lmdb-header.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-04-15 06:08:33 +02:00
Tobias Geerinckx-Rice 05f6b03217
gnu: synfig, synfigstudio: Update to 1.2.2.
* gnu/packages/animation.scm (synfig-version): New variable.
(etl)[version]: Use it.
(synfig)[version]: Likewise.
[source]: Update to 1.2.2.
[native-inputs]: Add intltool.
(synfigstudio)[version]: Use SYNFIG-VERSION.
[source]: Update to 1.2.2.  Remove obsolete patch.
* gnu/packages/patches/synfigstudio-fix-ui-with-gtk3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-04-14 20:15:29 +02:00
Ludovic Courtès c8e070dad7
build: Fix typo in Makefile.am conditional.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>
in <https://bugs.gnu.org/35138>.

This is a followup to a7ad4505b7.

* gnu/local.mk [!ENABLE_INSTALLER]: Use 'else', not 'elif'.
2019-04-12 17:56:23 +02:00
Eric Bavier 89647ff1d4
gnu: idris: Run tests.
* gnu/packages/patches/idris-test-no-node.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/idris.scm (idris)[origin]: Use it.
[native-inputs]: New field.
[arguments]: Remove "#:tests? #f".  Add custom 'check' phase after 'install'.
2019-04-11 19:34:01 -05:00
Julien Lepiller ec9d932562
gnu: Add ocaml-dose3.
* gnu/packages/ocaml.scm (ocaml-dose3): New variable.
* gnu/packages/patches/ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch:
New file.
* gnu/packages/patches/ocaml-dose3-Fix-for-ocaml-4.06.patch: New file.
* gnu/packages/patches/ocaml-dose3-dont-make-printconf.patch: New file.
* gnu/packages/patches/ocaml-dose3-Install-mli-cmx-etc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-04-10 21:39:20 +02:00
Carlo Zancanaro 3e4e74c10e
gnu: kodi: Allow connecting to HTTPS sources.
* gnu/packages/patches/kodi-set-libcurl-ssl-parameters.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kodi.scm (kodi)[patches]: Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-04-10 17:09:47 +02:00
Ludovic Courtès db7441e470
Merge branch 'master' into staging 2019-04-08 23:08:56 +02:00
Efraim Flashner 4994174fa0
gnu: libopenshot: Update to 0.2.3.
* gnu/packages/video.scm (libopenshot): Update to 0.2.3.
2019-04-08 21:48:21 +03:00
Marius Bakke ba00235a96
Merge branch 'master' into staging 2019-04-08 00:54:01 +02:00
Efraim Flashner 8a3bb34c5e
gnu: lcms: Fix CVE-2018-16435.
* gnu/packages/ghostscript.scm (lcms)[replacement]: New field.
(lcms/fixed): New variable.
* gnu/packages/patches/lcms-CVE-2018-16435.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-04-07 21:10:26 +03:00
Brian Leung 3dbd240937
gnu: Add emacs-undohist-el.
* gnu/packages/patches/emacs-undohist-ignored.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add this.
* gnu/packages/emacs-xyz.scm (emacs-undohist-el): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-04-05 18:44:05 +03:00
Ludovic Courtès f63861b5a6
gnu: Add localed, extracted from systemd.
* gnu/packages/freedesktop.scm (localed): New variable.
* gnu/packages/patches/localed-xorg-keyboard.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-05 15:39:35 +02:00
Efraim Flashner 2beca2a55c
gnu: flac: Fix CVE-2017-6888.
* gnu/packages/xiph.scm (flac)[replacement]: New field.
(flac/fixed): New variable.
* gnu/packages/patches/flac-CVE-2017-6888.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-04-05 09:50:07 +03:00
Tobias Geerinckx-Rice 9859800f5d
gnu: ledger: Update to 3.1.3.
The patch applies but has been unnecessary since 3.1.2.

* gnu/packages/finance.scm (ledger): Update to 3.1.3.
[source]: Remove obsolete patch.
* gnu/packages/patches/ledger-fix-uninitialized.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-04-05 06:25:24 +02:00
Efraim Flashner c531fad7a0
gnu: flac: Fix CVE-2017-6888.
* gnu/packages/xiph.scm (flac)[replacement]: New field.
(flac/fixed): New variable.
* gnu/packages/patches/flac-CVE-2017-6888.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-04-04 22:20:33 +03:00
Ludovic Courtès aff0cce917
gnu: Move nss & co. to nss.scm.
* gnu/packages/gnuzilla.scm (nspr, nss): Move to...
* gnu/packages/nss.scm: ... here.  New file.
* gnu/packages/chromium.scm, gnu/packages/disk.scm,
gnu/packages/freedesktop.scm, gnu/packages/gnome.scm,
gnu/packages/gnunet.scm, gnu/packages/java.scm,
gnu/packages/libreoffice.scm, gnu/packages/linux.scm,
gnu/packages/mate.scm, gnu/packages/openldap.scm,
gnu/packages/package-management.scm, gnu/packages/password-utils.scm,
gnu/packages/polkit.scm, gnu/packages/qt.scm,
gnu/packages/sssd.scm, gnu/packages/storage.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/xml.scm: Adjust
accordingly.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add nss.scm.
2019-04-04 17:47:02 +02:00
Ludovic Courtès 804744b338
gnu: Add (gnu packages haskell-apps).
* gnu/packages/version-control.scm (darcs, git-annex): Move to...
* gnu/packages/haskell-apps.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-04-04 17:47:01 +02:00
Ludovic Courtès a7ad4505b7
build: Always ship the (gnu installer …) modules.
Fixes <https://bugs.gnu.org/35138>.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.

* gnu/local.mk (INSTALLER_MODULES): New variable.
(GNU_SYSTEM_MODULES, MODULES_NOT_COMPILED): Append $(INSTALLER_MODULES)
conditionally.
2019-04-04 17:47:01 +02:00
Leo Famulari 6d01a7f4c4
gnu: ntfs-3g: Fix CVE-2019-9755.
* gnu/packages/patches/ntfs-3g-CVE-2019-9755.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (ntfs-3g)[source]: Use it.
2019-04-03 18:31:59 -04:00
Timothy Sample 96c90474c0
gnu: Add configuration for depthcharge bootloader.
* gnu/bootloader/depthcharge: New file.
* gnu/local.mk [GNU_SYSTEM_MODULES]: Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-04-03 18:21:42 +02:00
Marius Bakke 3eed550072
gnu: Remove gtk+/fixed.
The merge preceding this commit ignored the replacement part of commit
bc91562939.  This commit removes the remaining
bits, as the patch is already included in GTK3 since version 3.24.3.

* gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+/fixed): Remove variable.
2019-04-01 01:32:33 +02:00
Marius Bakke 571fb008a5
Merge branch 'master' into staging 2019-04-01 00:02:39 +02:00
Brian Leung f125c5a5ea
gnu: emacs-zones: silence byte-compiler.
* gnu/packages/patches/emacs-zones-called-interactively.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-31 23:32:47 +02:00
Mark H Weaver bc91562939
gnu: gtk+: Graft upstream fix for crashes in Emacs and IceCat.
Fixes <https://bugs.gnu.org/34454>.

* gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtk+/fixed): New variable.
(gtk+)[replacement]: New field.
2019-03-30 02:34:24 -04:00
Tobias Geerinckx-Rice 01307bba9c
gnu: reptyr: Update to 0.7.0.
* gnu/packages/screen.scm (reptyr): Update to 0.7.0.
[source]: Remove patch.
[arguments]: Add bash completion directory name.
* gnu/packages/patches/reptyr-fix-gcc-7.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-28 20:19:28 +01:00
Marius Bakke 0fa5055597
gnu: texlive-bin: Adopt LFS patch.
The origin disappeared, and the new revision does not include all the Poppler
fixes.  Adjust the package to take Arch's Poppler patches instead.

* gnu/packages/patches/texlive-bin-CVE-2018-17407.patch: New file.
* gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch,
gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tex.scm (texlive-bin)[source](patches): Likewise.
[arguments]: Likewise.
2019-03-27 18:05:05 +01:00
Danny Milosavljevic 516f6f55eb
gnu: docker: Use fewer modprobes.
Fixes <https://bugs.gnu.org/34333>.
Reported by Allan Adair <allan@adair.io>.

* gnu/packages/patches/docker-use-fewer-modprobes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/docker.scm (docker)[source]: Use it.
2019-03-25 20:27:57 +01:00
Ludovic Courtès db1e2522f6
Add (gnu system keyboard).
* gnu/system/keyboard.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu.scm (%public-modules): Add it.
2019-03-24 23:06:11 +01:00
Marius Bakke f882f62c6b
gnu: python-pytest: Update to 4.3.1.
* gnu/packages/check.scm (python-pytest): Update to 4.3.1.
[source](patches): Remove.
* gnu/packages/patches/python-pytest-pluggy-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-23 23:25:56 +01:00
Marius Bakke 8c14f7f8a7
Merge branch 'staging' into core-updates 2019-03-23 23:16:55 +01:00
Marius Bakke 3cb61ca85a
Merge branch 'master' into staging 2019-03-23 22:50:07 +01:00
Efraim Flashner abc12b0d6e
gnu: Add moarvm.
* gnu/packages/perl6.scm (moarvm): New variable.
2019-03-23 22:26:47 +02:00
Pierre Langlois a9f847adc3
gnu: libmygpo-qt: Move to new 'gpodder.scm' file.
* gnu/packages/music.scm (libmygpo-qt): Move to 'gpodder.scm'.
* gnu/packages/gpodder.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-23 18:15:36 +01:00
Tobias Geerinckx-Rice e190d12eae
gnu: dropbear: Update to 2019.77.
* gnu/packages/ssh.scm (dropbear): Update to 2019.77.
[source]: Remove patch.
* gnu/packages/patches/dropbear-CVE-2018-15599.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-23 16:02:41 +01:00
Danny Milosavljevic 03fb5ff6ae
gnu: libgit2: Avoid Python.
* gnu/packages/patches/libgit2-avoid-python.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (libgit2)[source]: Use it.
[inputs]: Remove python.
[native-inputs]: Add guile-2.2.
2019-03-21 23:29:10 +01:00
Marius Bakke 081850816f
Merge branch 'master' into staging 2019-03-21 23:18:54 +01:00
Robert Smith 2f87048dbe
gnu: elixir: Update to 1.8.1.
* gnu/packages/elixir.scm (elixir): Update to 1.8.1.
[source](patches): New field.
[home-page]: Use HTTPS.
* gnu/packages/patches/elixir-path-length.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-03-21 20:48:12 +01:00
Marius Bakke c11f86ff16
gnu: libgit2: Update to 0.28.1.
* gnu/packages/patches/libgit2-oom-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/version-control.scm (libgit2): Update to 0.28.1.
[source](patches): Remove 'libgit2-oom-test.patch'.
2019-03-21 19:23:48 +01:00
Mark H Weaver 8b672b2c48
gnu: blender: Restore version 2.79b for systems without OpenGL 3.
Fixes <https://bugs.gnu.org/33882>.

* gnu/packages/graphics.scm (blender-2.79): New variable.
(blender)[description]: Remove obsolete claim that the stable
release no longer works in Guix.
* gnu/packages/patches/blender-2.79-newer-ffmpeg.patch,
gnu/packages/patches/blender-2.79-python-3.7-fix.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-03-20 18:20:36 -04:00
Ricardo Wurmus c16423f143
services: Add nslcd-service-type.
* gnu/services/authentication.scm (nslcd-service-type, nslcd-configuration,
%nslcd-accounts): New variables.
(uglify-field-name, value->string, serialize-field, serialize-list,
ssl-option?, tls-reqcert-option?, deref-option?,
comma-separated-list-of-strings?, serialize-ignore-users-option, log-option?,
serialize-log-option, valid-map?, scope-option?, serialize-scope-option,
map-entry?, list-of-map-entries?, filter-entry?, list-of-filter-entries?,
serialize-filter-entry, serialize-list-of-filter-entries, serialize-map-entry,
serialize-list-of-map-entries, nslcd-config-file, nslcd-etc-service,
nslcd-shepherd-service, pam-ldap-pam-services, pam-ldap-pam-service,
generate-nslcd-documentation): New procedures.
* gnu/tests/ldap.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (LDAP Services): Document it.
2019-03-20 20:31:15 +01:00
Tobias Geerinckx-Rice d17b1c0891
gnu: knot: Update to 2.8.0.
* gnu/packages/dns.scm (knot): Update to 2.8.0.
[source]: Add patch.
* gnu/packages/patches/knot-include-system-lmdb-header.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-03-20 00:44:57 +01:00
Andreas Enge 1d6589db81
gnu: Add python-flint.
* gnu/packages/algebra.scm (python-flint): New variable.
* gnu/packages/patches/python-flint-includes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register the patch.
2019-03-19 10:45:17 +01:00
Tobias Geerinckx-Rice 9081333bcd
gnu: cracklib: Update to 2.9.7.
* gnu/packages/password-utils.scm (cracklib): Update to 2.9.7.
[source]: Remove patches.
* gnu/packages/patches/cracklib-CVE-2016-6318.patch,
gnu/packages/patches/cracklib-fix-buffer-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove them.
2019-03-18 23:42:48 +01:00
ng0 a3f2c295e7
gnu: libextractor: Update to 1.9.
* gnu/packages/gnunet (libextractor): Update to 1.9.
[source]: Remove patches.
* gnu/packages/patches/libextractor-CVE-2018-20430.patch
gnu/packages/patches/libextractor-CVE-2018-20431.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-03-18 15:05:08 +01:00
Marius Bakke 81382e3f6d
gnu: meson: Update to 0.50.0.
* gnu/packages/build-tools.scm (meson): Update to 0.50.0.
* gnu/packages/patches/at-spi2-core-meson-compat.patch,
gnu/packages/patches/totem-meson-compat.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gnome.scm (totem)[source](patches): Add totem-meson.compat.patch.
* gnu/packages/gtk.scm (at-spi2-core)[source](patches): New field.
2019-03-15 16:03:59 +01:00
Marius Bakke 19008a22d1
Merge branch 'staging' into core-updates 2019-03-14 16:30:19 +01:00
Marius Bakke ebfe259f66
Merge branch 'master' into staging 2019-03-14 15:06:06 +01:00
Marius Bakke 7fda7b8fad
gnu: pugixml: Build as shared library.
* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
2019-03-10 21:44:25 +01:00
Marius Bakke 96ab233df7
Merge branch 'staging' into core-updates 2019-03-10 18:47:02 +01:00
Marius Bakke 8c5533b582
Merge branch 'master' into staging 2019-03-10 18:38:25 +01:00
Pierre Neidhardt 983550692d
gnu: Add hyperledger-fabric.
* gnu/local.mk (hyperledger): New variable.
2019-03-09 10:15:46 +01:00
Ricardo Wurmus 8b6acb1f20
gnu: blast+: Update to 2.7.1.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.7.1.
[inputs]: Add lmdb.
[source]: Remove obsolete patch.
* gnu/package/patches/blast+-fix-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-08 23:00:07 +01:00
Ludovic Courtès ec600e4544
Add (gnu build accounts).
* gnu/build/accounts.scm, tests/accounts.scm: New files.
* Makefile.am (SCM_TESTS): Add tests/accounts.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add build/accounts.scm.
2019-03-07 20:05:09 +01:00
Ludovic Courtès f6f67b87c0
system: Add (gnu system accounts).
The (gnu system accounts) module is meant to be used both on the build-
and on the host-side.

* gnu/system/shadow.scm <top level>: Call 'default-shell'.
(<user-account>, <user-group>): Move to...
* gnu/system/accounts.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
2019-03-07 20:04:02 +01:00
Ricardo Wurmus 9f3c6c8825
gnu: gnome-todo: Update to 3.28.1.
* gnu/packages/gnome.scm (gnome-todo): Update to 3.28.1.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/patches/gnome-todo-libical-compat.patch: Remove file.
2019-03-07 13:43:17 +01:00
Ricardo Wurmus 0daf0efbe6
gnu: gcr: Update to 3.28.0.
* gnu/packages/patches/gcr-disable-failing-tests.patch,
gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch:
Remove files.
* gnu/local.mk (dist_patch_DATA): Remove patches.
* gnu/packages/gnome.scm (gcr): Update to 3.28.0.
[arguments]: Add phase "disable-failing-tests"; rewrite "pre-check" phase.
[native-inputs]: Add libxml2.
2019-03-07 13:41:04 +01:00
Marius Bakke 350b7f8a74
gnu: valgrind: Update to 3.14.0.
* gnu/packages/patches/valgrind-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/valgrind.scm (valgrind): Update to 3.14.0.
[supported-systems]: Add mips64el-linux.
2019-03-06 16:32:31 +01:00
Marius Bakke f339df425e
Merge branch 'master' into staging 2019-03-06 16:31:58 +01:00
Ivan Petkov 1a3db0b22f
gnu: rust: Update to 1.31.1.
* gnu/patches/rust-1.30-gdb-llvm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.29): ...this.
(rust-1.30): New variable.
(rust): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-05 13:43:09 +01:00
Marius Bakke b4d7689f92
Merge branch 'staging' into core-updates 2019-03-04 23:05:01 +01:00
Marius Bakke 1a246c01c6
gnu: python-pytest: Update to 4.3.0.
* gnu/packages/patches/python-pytest-pluggy-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/check.scm (python-pytest): Update to 4.3.0.
[source](patches): New field.
[arguments]: Skip five new tests.  Disable tests by passing them as arguments.
2019-03-04 22:58:57 +01:00
Marius Bakke ed709ee954
gnu: Python@2: Update to 2.7.16.
* gnu/packages/patches/python2-CVE-2018-1000802.patch,
gnu/packages/patches/python2-CVE-2018-14647.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python.scm (python-2.7): Update to 2.7.16.
[source](patches): Remove obsolete.
2019-03-04 22:58:56 +01:00
Marius Bakke 4f8dc1536a
Merge branch 'master' into staging 2019-03-04 22:31:59 +01:00
Tobias Geerinckx-Rice ad257ec8b5
gnu: thermald: Update to 1.8.
* gnu/packages/admin.scm (thermald): Update to 1.8.
[source]: Add patch.
* gnu/packages/patches/thermald-make-int-max32-visible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-03-04 19:07:10 +01:00
Ricardo Wurmus 96f39b2a6e
gnu: Add java-jblas.
* gnu/packages/java-maths.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-03-04 17:14:15 +01:00
Ricardo Wurmus 74fea1e2df
gnu: lyx: Remove obsolete patch.
* gnu/packages/patches/lyx-2.2.3-fix-test.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-04 17:14:15 +01:00
Lprndn e32099732c
gnu: Add arcan.
* gnu/packages/arcan.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-04 15:22:59 +01:00
Efraim Flashner 4f889375f2
gnu: libopenshot: Fix tests on other architectures.
* gnu/packages/video.scm (libopenshot)[source]: Add patch.
* gnu/packages/patches/libopenshot-fixup-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-03-03 17:35:49 +02:00
Marius Bakke f5e563e50a
Merge branch 'staging' into core-updates 2019-03-01 17:40:51 +01:00
Marius Bakke 19464173ba
Merge branch 'master' into staging 2019-03-01 17:33:00 +01:00
Marius Bakke e02671939b
gnu: acl: Update to 2.2.53.
* gnu/packages/patches/acl-hurd-path-max.patch,
gnu/packages/patches/acl-fix-perl-regex.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/acl.scm (acl): Update to 2.2.53.
[source](uri): Adjust for renamed tarball.
[arguments]: Remove #:test-target.  Adjust disabled tests.  Don't override
install phase.
2019-03-01 16:31:52 +01:00
Tobias Geerinckx-Rice a92c6b1a2b
gnu: openssl: Fix CVE-2019-1559.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl/fixed): New variable.
(openssl-next)[inherit]: Inherit from it instead.
* gnu/packages/patches/openssl-CVE-2019-1559.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-03-01 00:00:16 +01:00
Tobias Geerinckx-Rice 2a18b57222
gnu: netpbm: Fix CVE-2017-258[67].
* gnu/packages/netpbm.scm (netpbm)[source]: Add patches.
* gnu/packages/patches/netpbm-CVE-2017-2586.patch,
gnu/packages/patches/netpbm-CVE-2017-2587.patch: New files.
* gnu/local.mk: Fix missing copyright year.
(dist_patch_DATA): Add them.
2019-02-28 22:35:41 +01:00
Marius Bakke 0ad4a12088
gnu: wpa_supplicant: Update to 2.7.
* gnu/packages/patches/wpa-supplicant-CVE-2017-13082.patch,
gnu/packages/patches/wpa-supplicant-CVE-2018-14526.patch,
gnu/packages/patches/wpa-supplicant-fix-key-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-nonce-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-zeroed-keys.patch,
gnu/packages/patches/wpa-supplicant-krack-followups.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.7.
[source](patches): Remove.
2019-02-28 19:08:48 +01:00
Efraim Flashner c643b49244
gnu: Add toot.
* gnu/packages/mastodon.scm (toot): New variable.
* gnu/local.mk (GNU_SYSTSEM_MODULES): Register it.
2019-02-28 08:56:59 +02:00
Tobias Geerinckx-Rice 17c65da896
gnu: wesnoth: Update to 1.14.6.
* gnu/packages/games.scm (wesnoth): Update to 1.14.6.
[source]: Remove upstreamed patch.
* packages/patches/wesnoth-newer-boost.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-27 15:48:52 +01:00
Nicolas Goaziou 8d611ef085
gnu: musescore: Update to 3.0.3.
* gnu/packages/music.scm (musescore): Update to 3.0.3.
[source]: Remove now obsolete patch.
[arguments]: Do not use bundled (as a submodule) libcrashreporter-qt.
* gnu/packages/patches/musescore-fix-use_webengine.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply file removal.
2019-02-27 01:10:48 +01:00
Marius Bakke 9a6b8c9fa3
Merge branch 'staging' into core-updates 2019-02-24 21:26:58 +01:00
Marius Bakke aa51eb2073
Merge branch 'master' into staging 2019-02-24 21:25:52 +01:00
Efraim Flashner 1a753385c7
gnu: Add libtommath.
* gnu/packages/multiprecision.scm (libtommath): New variable.
* gnu/packages/patches/libtommath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-02-24 10:39:51 +02:00
Marius Bakke 4e3a7d8461
gnu: Python: Consolidate test patches.
While at it, adjust patches for -p1 patch flag.

* gnu/packages/patches/python-fix-tests.patch: Delete file.  Move contents ...
* gnu/packages/patches/python-3-fix-tests.patch: ... here.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python.scm (python-3.7)[source](patches): Remove obsolete.
[source](patch-flags): Remove.
* gnu/packages/patches/python-3-deterministic-build-info.patch,
gnu/packages/patches/python-3-search-paths.patch: Adjust for `patch -p1`.
2019-02-23 20:44:36 +01:00
Marius Bakke b3e508dadb
gnu: texinfo: Update to 6.6.
* gnu/packages/patches/texinfo-perl-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/texinfo.scm (texinfo): Update to 6.6.
[source](patches): Remove.
2019-02-20 17:25:23 +01:00
Marius Bakke 901236474a
Merge branch 'staging' into core-updates 2019-02-20 17:19:00 +01:00
Marius Bakke 2c76e19df4
Merge branch 'master' into staging 2019-02-20 17:01:39 +01:00
Marius Bakke 2bf5097784
gnu: xmodmap: Update to 1.0.10.
* gnu/packages/patches/xmodmap-asprintf.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xorg.scm (xmodmap): Update to 1.0.10.
[source](patches): Remove.
[home-page]: Set to source repository.
2019-02-20 16:40:32 +01:00
Leo Famulari c12b234695
gnu: libgd: Fix CVE-2019-{6977,6978}.
* gnu/packages/gd.scm (gd)[replacement]: New field.
(gd/fixed): New variable.
* gnu/packages/patches/gd-CVE-2019-6977.patch,
gnu/packages/patches/gd-CVE-2019-6978.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-02-19 15:47:35 -05:00
Leo Famulari c9b36f450b
gnu: Add magic-wormhole-mailbox-server.
* gnu/packages/magic-wormhole.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-02-19 14:34:31 -05:00
Marius Bakke f1e9de4d3a
gnu: Add ungoogled-chromium.
* gnu/packages/aux-files/chromium/master-preferences.json,
gnu/packages/chromium.scm: New files.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2019-02-18 23:41:56 +01:00
Tobias Geerinckx-Rice d0d207cdca
gnu: tomsfastmath: Update to 0.13.1.
* gnu/packages/multiprecision.scm (tomsfastmath): Update to 0.13.1.
[source]: Remove patch.
* gnu/packages/patches/tomsfastmath-constness.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-18 18:07:06 +01:00
Marius Bakke 9fd6f2a713
gnu: xf86-video-i128: Update to 1.4.0.
* gnu/packages/patches/xf86-video-i128-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xorg.scm (xf86-video-i128): Update to 1.4.0.
[source](patches): Remove.
2019-02-17 18:44:20 +01:00
Tobias Geerinckx-Rice 4f4b37dfdf
gnu: pius: Update to 2.2.7.
* gnu/packages/gnupg.scm (pius): Update to 2.2.7.
[source]: Remove upstreamed patch.
* gnu/packages/patches/pius.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-17 03:37:48 +01:00
Danny Milosavljevic f7c4853a6b
gnu: Add genimage.
* gnu/packages/genimage.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-02-15 17:49:08 +01:00
Marius Bakke d199a4c7b4
gnu: LLVM, Clang: Update to 7.0.1.
* gnu/packages/patches/clang-7.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 7.0.1.
(llvm-7.0.1): Remove variable.
(clang-from-llvm)[arguments]: Adjust phase to match Clang 7.
(llvm-6, clang-runtime-6, clang-6): New public variables.
* gnu/packages/dlang.scm (ldc)[native-inputs]: Change LLVM and CLANG to
LLVM-6.0 and CLANG-6.0.
* gnu/packages/gl.scm (mesa)[inputs]: Change from LLVM to LLVM-6.
2019-02-15 12:12:09 +01:00
Tobias Geerinckx-Rice b2cf559772
gnu: allegro@4: Update to 4.4.3.
* gnu/packages/game-development.scm (allegro-4): Update to 4.4.3.
[source]: Remove upstreamed patch.
* gnu/packages/patches/allegro4-mesa-18.2.5-and-later.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-15 05:41:20 +01:00
Christopher Baines 28cf8dab3e
gnu: ruby-safe-yaml: Add missing require 'time'.
Patch ruby-safe-yaml to fix an issue that would lead to an error like this:
uninitialized constant SafeYAML::Parse::Date::DateTime

It's been reported upstream [1], and this patch was taken from the upstream Git
repository.

1: https://github.com/dtao/safe_yaml/issues/80

* gnu/packages/ruby.scm (ruby-safe-yaml)[source]: Switch to the Git repository
so that applying patches works and add a patch.
[arguments]: Enable tests and add a phase to set the TZ environment variable,
as one of the tests depends on a certian timezone.
* gnu/packages/patches/ruby-safe-yaml-add-require-time.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
2019-02-14 21:37:52 +00:00
Eric Bavier 40b114c0bb
gnu: dealii: Upgrade to 9.0.1.
* gnu/packages/patches/dealii-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (dealii)[source]: Upgrade to 9.0.1.  Use patch.
[arguments]: Use new MPI configuration flags.
2019-02-13 22:39:12 -06:00
Andreas Enge 69c15ad8a4
gnu: qtbase: Restore compilation on linux kernels < 4.11.
Fixes <https://bugs.gnu.org/34431>.

* gnu/packages/patches/qtbase-old-kernel.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/qt.scm (qtbase): Add patch.
2019-02-14 00:30:27 +01:00
Marius Bakke 6901878894
Merge branch 'master' into staging 2019-02-14 00:20:28 +01:00
Eric Bavier f73750e6f4
gnu: scalapack: Remove use of deprecated MPI1 symbols.
* gnu/packages/patches/scalapack-blacs-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (scalapack)[source]: Use it.
2019-02-13 14:08:19 -06:00
Danny Milosavljevic baf766a7ff
gnu: mrustc: Fix deserialization bug in communication with the procedural
macro compiler plugin.

* gnu/packages/patches/mrustc-0.8.0-fix-variable-length-integer-receiving.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (mrustc)[source]: Use it.

Co-authored-by: Chris Marusich <cmmarusich@gmail.com>
2019-02-13 13:28:29 +01:00
Ricardo Wurmus f90ed0284a
gnu: ledger: Update to 3.1.2 [security fixes].
* gnu/packages/finance.scm (ledger): Update to 3.1.2.
[arguments]: Remove #:modules; remove obsolete configure flags; remove make
flags; remove phase "boost-compat"; remove custom check phase; remove
"relocate-elisp" phase; disable broken test in "check-setup" phase.
[native-inputs]: Remove emacs-minimal.
[license]: Remove gpl2+.
* gnu/packages/patches/ledger-revert-boost-python-fix.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-13 10:55:49 +01:00
Christopher Baines e7e259a503
gnu: red-eclipse: Fix build.
Add a patch from the upstream repository [1] that resolves some errors that
prevent the package from building [2].

1: https://github.com/red-eclipse/base/commit/b16b4963c1ad81bb9ef784bc49
2: error: ‘____gammal_r_finite’ was not declared in this scope

* gnu/packages/games.scm (red-eclipse)[source] Add patch.
* gnu/packages/patches/red-eclipse-remove-gamma-name-hack.patch: New file
* gnu/local.mk (dist_patch_DATA): Add new patch.
2019-02-13 08:03:00 +00:00
Marius Bakke bec2a2e10e
gnu: Move KDE Plasma components to separate module.
* gnu/packages/kde.scm (libkscreen, libksysguard): Move from here ...
* gnu/packages/kde-plasma.scm: ... to here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2019-02-12 23:49:02 +01:00
Leo Famulari ce4593ec4c
gnu: runc: Update to 1.0.0-rc6 [fixes CVE-2019-5736].
* gnu/packages/virtualization.scm (runc): Update to 1.0.0-rc6.
[source]: Use a descriptive file-name. Add 'runc-CVE-2019-5736.patch'
* gnu/packages/patches/runc-CVE-2019-5736.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-02-12 12:53:12 -05:00
Efraim Flashner c86b5f1b9b
gnu: glibc@2.27: fix CVE-2018-11236, CVE-2018-11237.
* gnu/packages/base.scm (glibc@2.27)[sources]: Add patches.
[properties]: New field, mark CVE-2017-18269 fixed.
* gnu/packages/patches/glibc-CVE-2018-11236.patch,
gnu/packages/patches/glibc-CVE-2018-11237.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2019-02-12 09:08:13 +02:00
Marius Bakke 9df397508d
gnu: poppler: Update to 0.74.0.
* gnu/packages/patches/scribus-poppler-0.73.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/scribus.scm (scribus)[source](patches): Add it.
* gnu/packages/pdf.scm (poppler): Update to 0.74.0.
[arguments]: Adjust renamed configure flag.
* gnu/packages/tex.scm (texlive-bin)[arguments]: Add phase 'use-code-for-even-newer-poppler'.
2019-02-11 19:48:31 +01:00
Marius Bakke c3f47e44cd
Merge branch 'master' into core-updates 2019-02-11 19:25:16 +01:00
Ludovic Courtès a76d0f032b
gnu: gnome-shell: Customize the GDM log-in screen.
* gnu/packages/patches/gnome-shell-theme.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (gnome-shell)[source](patches, modules)
(snippet): New fields.
[arguments]: Add 'rebuild-css' phase.
[native-inputs]: Add RUBY-SASS.
2019-02-10 23:25:01 +01:00
Marius Bakke 27c2917ac4
Merge branch 'staging' into core-updates 2019-02-10 21:05:19 +01:00
Nicolas Goaziou 2becddeb0c
gnu: emacs-pdf-tools: Update to 0.90.
* gnu/packages/emacs-xyz.scm (emacs-pdf-tools): Update to 0.90.
[source]: Remove patch.
* gnu/packages/patches/emacs-pdf-tools-poppler.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove reference to deleted file.
2019-02-09 23:30:13 +01:00
Marius Bakke 8771fc1715
gnu: aspell: Fix FTBFS with GCC7.
* gnu/packages/patches/aspell-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/aspell.scm (aspell)[source](patches): Use it.
2019-02-09 21:53:42 +01:00
Marius Bakke d16ef28b80
gnu: python-pycodestyle: Update to 2.5.0.
* gnu/packages/patches/python-pycodestyle-stdlib-tokenize-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/python-xyz.scm (python-pycodestyle): Update to 2.5.0.
[source](patches): Remove.
2019-02-09 21:27:24 +01:00
Marius Bakke ebbb7286b9
Merge branch 'master' into core-updates 2019-02-09 21:11:00 +01:00
Marius Bakke 037d591367
gnu: libvpx: Update to 1.8.0.
* gnu/packages/patches/gst-plugins-good-libvpx-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/video.scm (libvpx): Update to 1.8.0.
[source](patches): Remove obsolete patch.
(libvpx-1.7): New public variable.
* gnu/packages/gnuzilla.scm (icecat)[inputs]: Use LIBVPX-1.7 instead of LIBVPX.
* gnu/packages/gstreamer.scm (gst-plugins-good)[source](patches): New field.
[arguments]: Add #:make-flags.
2019-02-09 20:58:15 +01:00
Ludovic Courtès 50a93adc05
Merge branch 'staging' 2019-02-09 15:14:59 +01:00
Eric Bavier 68a116bd56
gnu: cool-retro-term: Upgrade to 1.1.1.
* gnu/packages/terminals.scm (cool-retro-term)[source]: Upgrade to 1.1.1.
Remove patches.  Adjust filtering in snippet for added/removed fonts.
[arguments]: Return #t in 'add-alternate-name' phase.
* gnu/packages/patches/cool-retro-term-dont-check-uninit-member.patch,
  gnu/packages/patches/cool-retro-term-fix-array-size.patch,
  gnu/packages/patches/cool-retro-term-memory-leak-1.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2019-02-09 00:50:16 -06:00
Eric Bavier 7fedc3fdfb
gnu: hdf5: Remove use of deprecated MPI1 symbols.
* gnu/packages/patches/hdf5-1.8-mpi-deprecations.patch,
  gnu/packages/patches/hdf5-mpi-deprecations.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (hdf5, hdf5-1.10)[source]: Use them.
2019-02-07 21:20:47 -06:00
Eric Bavier 2bdf26f1c8
gnu: superlu-dist: Remove use of deprecated MPI1 symbols.
* gnu/packages/patches/superlu-dist-fix-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (superlu-dist)[source]: Use it.
2019-02-07 21:20:23 -06:00
Marius Bakke a5be549e39
gnu: libarchive: Remove graft for 3.3.3.
* gnu/packages/patches/libarchive-CVE-2017-14166.patch,
gnu/packages/patches/libarchive-CVE-2017-14502.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/backup.scm (libarchive): Update to 3.3.3.
[source](patches): Adjust for 3.3.3.
[replacement]: Remove field.
(libarchive-3.3.3): Remove variable.
2019-02-07 22:10:17 +01:00
Ricardo Wurmus ba88eea2b3
Merge branch 'master' into core-updates 2019-02-06 13:03:26 +01:00
Nicolas Goaziou 00e18f9fa9
gnu: musescore: Update to 3.0.2.
* gnu/packages/music.scm (musescore): Update to 3.0.2.
[source]: Add patch.
* gnu/packages/patches/musescore-fix-use_webengine.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.
2019-02-05 23:11:43 +01:00
Tobias Geerinckx-Rice ab1019f165
gnu: nyx: Update to 2.1.0.
* gnu/packages/tor.scm (nyx): Update to 2.1.0.
[source]: Remove patch.
* gnu/packages/patches/nyx-show-header-stats-with-python3.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 18:47:09 +01:00
Leo Famulari e36d043882
gnu: Remove unused patch 'mcron-install.patch'.
This is a followup to commit cfbf6de18c.

* gnu/packages/patches/mcron-install.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:50 +01:00
Leo Famulari 484f010dd7
gnu: Remove unused patch 'ocaml-graph-honor-source-date-epoch.patch'.
This is a followup to commit 564cf93f2a.

* gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 5cc3dbbccd
gnu: Remove unused patch 'ocaml-findlib-make-install.patch'.
This is a followup to commit bff6739d5e.

* gnu/packages/patches/ocaml-findlib-make-install.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 5baf78999c
gnu: Remove unused patch 'python2-rdflib-drop-sparqlwrapper.patch'.
* gnu/packages/patches/python2-rdflib-drop-sparqlwrapper.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 800d74dc9a
gnu: Remove unused patch 'openldap-CVE-2017-9287.patch'.
This is a followup to commit 47415332d7.

* gnu/packages/patches/openldap-CVE-2017-9287.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 99ee274f0d
gnu: Remove unused patch 'glibc-memchr-overflow-i686.patch'.
This is a followup to commit 67d527e35e.

* gnu/packages/patches/glibc-memchr-overflow-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 1d1b0b1fb1
gnu: Remove unused patch 'net-tools-bitrot.patch'.
This is a followup to commit b5f610620b.

* gnu/packages/patches/net-tools-bitrot.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 035542e93a
gnu: Remove unused patch 'xboing-CVE-2004-0149.patch'.
This is a followup to commit 740a335558.

* gnu/packages/patches/xboing-CVE-2004-0149.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:56:39 +01:00
Leo Famulari 6bf2201350
gnu: Remove unused patch 'ao-cad-aarch64-support.patch'.
This is a followup to commit 28f4d56dd3.

* gnu/packages/patches/ao-cad-aarch64-support.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:51:34 +01:00
Leo Famulari ee2875e57d
gnu: Remove unused patch 'blender-newer-ffmpeg.patch'.
This is a followup to commit fc51c28ae8.

* gnu/packages/patches/blender-newer-ffmpeg.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:46:26 +01:00
Leo Famulari bfa3e64d7f
gnu: Removed unused patch 'readline-7.0-mingw.patch'.
This patch was introduced in commit ae12d58627,
but it was never used.

See <https://bugs.gnu.org/26581> for more information.

* gnu/packages/patches/readline-7.0-mingw.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:45:25 +01:00
Vagrant Cascadian 4da4e952dd
gnu: u-boot: Update to 2019.01.
* gnu/packages/bootloaders.scm (u-boot): Update to 2019.01.
(u-boot-tools): Disable CONFIG_SOUND in sandbox configs.
(u-boot-pinebook)[source]: Remove patches.
* gnu/packages/patches/u-boot-pinebook-a64-update-dts.patch,
gnu/packages/patches/u-boot-pinebook-dts.patch,
gnu/packages/patches/u-boot-pinebook-mmc-calibration.patch,
gnu/packages/patches/u-boot-pinebook-r_i2c-controller.patch,
gnu/packages/patches/u-boot-pinebook-syscon-node.patch,
gnu/packages/patches/u-boot-pinebook-video-bridge.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust as necessary.
2019-02-04 00:21:48 +01:00
Danny Milosavljevic f8ff37d6c0
gnu: Add gnu-efi.
* gnu/packages/efi.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-02-04 00:14:16 +01:00
Marius Bakke 8576505422
gnu: libreoffice: Fix FTBFS with Boost 1.69.0.
* gnu/packages/patches/libreoffice-boost.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libreoffice.scm (libreoffice)[source](patches): Add it.
2019-02-02 20:10:18 +01:00
Marius Bakke 0747328e31
Merge branch 'master' into staging 2019-01-31 23:32:56 +01:00
Marius Bakke 39855bfef1
gnu: p11-kit: Update to 0.23.15.
* gnu/packages/patches/p11-kit-jks-timestamps.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.15.
[source](patches): New field.
2019-01-31 20:57:21 +01:00
Andreas Enge adba64662c
gnu: Add python-cypari2 and python2-cypari2.
* gnu/packages/sagemath.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
2019-01-31 14:58:47 +01:00
Leo Famulari 11d19ca236
gnu: QEMU: Fix CVE-2018-16872 and CVE-2019-6778.
* gnu/packages/patches/qemu-CVE-2018-16872.patch,
gnu/packages/patches/qemu-CVE-2019-6778.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
2019-01-31 14:35:48 +01:00
Mark H Weaver 948879eeda
gnu: icecat: Add icecat-source.
* gnu/packages/gnuzilla.scm (computed-origin-method): New variable.
(%icecat-version, icecat-source): New variables.
* gnu/packages/patches/icecat-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-01-29 22:29:40 -05:00
Efraim Flashner 23c2598233
gnu: x265: Update to 3.0.
* gnu/packages/video.scm (x265): Update to 3.0.
[source]: Remove patch.
* gnu/packages/patches/x265-detect512-all-arches.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-29 10:07:58 +02:00
Ricardo Wurmus 66abc619d5
gnu: Add missing file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/installer/newt/user.scm.
2019-01-28 23:28:46 +01:00
Ricardo Wurmus 0791437f97
gnu: Move most packages from guile.scm to new module.
* gnu/packages/guile.scm (artanis, guildhall, guile-aspell, guile-bash,
guile-8sync, guile-daemon, guile-dsv, guile-fibers, guile-syntax-highlight,
guile-sjson, guile-colorized, guile-pfds, guile-aa-tree, guile-simple-zmq,
jupyter-guile-kernel, guile-sparql, guile-debbugs, guile-email,
guile-debbugs-next, guile-newt, guile-mastodon, guile-parted, guile-xosd,
guile-dbi, guile-dbd-sqlite3, guile-config, guile-hall, guile-ics, guile-wisp,
guile-sly, g-wrap, guile-miniadapton, guile-reader, guile2.2-reader,
guile-ncurses, guile-ncurses/gpm, guile-lib, guile2.0-lib, guile2.2-lib,
guile-minikanren, guile2.0-minikanren, guile2.2-minikanren, guile-irregex,
guile2.0-irregex, guile2.2-irregex, haunt, guile2.0-haunt, guile2.2-haunt,
guile-redis, guile2.0-redis, guile2.2-redis, guile-commonmark,
guile2.0-commonmark, guile2.2-commonmark, mcron, mcron2): Move these variables
from here...
* gnu/packages/guile-xyz.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/installer.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/ci.scm,
gnu/packages/gtk.scm,
gnu/packages/guile.scm,
gnu/packages/mail.scm,
gnu/packages/package-management.scm,
gnu/packages/skribilo.scm,
gnu/packages/web.scm,
gnu/services/mcron.scm: Update module references.
2019-01-28 14:57:10 +01:00
Christopher Baines dd7bc92afc
gnu: linkchecker: Fix most test failures.
Add a patch to skip more tests that require the network. Along with some other
changes, this gets all but of one of the tests passing.

The remaining test is broken due to a problem with the Python package in Guix,
which is fixed by [1] which is currently on the core-updates branch. This
patch doesn't work on core-updates due to python2-miniboa not being present.

1: d453b0e11d

* gnu/packages/python.scm (linkchecker)[source]: Add patch.
[native-inputs]: Add more inputs required for the tests.
[arguments]: Enable the tests, move the 'check phase after 'install. Test
using the installed software, and use py.test.
2019-01-25 22:00:05 +00:00
Eric Bavier 6161141e91
superlu-dist: Upgrade to 6.1.0.
* gnu/packages/patches/superlu-dist-awpm-grid.patch: New file.
* gnu/packages/maths.scm (superlu-dist)[source]: Upgrade to 6.0.0.  Remove
extraneous 'use-modules' in snippet.
[build-system]: Change to cmake-build-system.
[propagated-inputs]:   Replace pt-scotch with pt-scotch32 to match integer
sizes.  Add "parmetis" input, from pt-scotch32.  Move lapack to ...
[inputs]: ...here.  Add openblas and combinatorial-blas.
[arguments]: Replace 'configure' phase with #:configure-flags.  Add
'set-c++-standard' and 'omp-setup' phases.  Remove
'create-install-directories, 'check', and 'install' phases, which are now
handled by cmake.
* gnu/local.mk (dist_patch_DATA): Add patch.
2019-01-25 13:10:05 -06:00
Eric Bavier fd3733432b
scotch: Upgrade to 6.0.6.
* gnu/packages/maths.scm (scotch): Upgrade to 6.0.6.
[source]: Remove patches that have been fixed upstream.
[arguments]: Add 'install-metis' phase.
[outputs]: New field.
(pt-scotch, pt-scotch32)[arguments]: Add 'mpi-setup' phase.  Use 'invoke'.
* gnu/packages/patches/scotch-graph-diam-64.patch,
gnu/packages/patches/scotch-graph-induce-type-64.patch,
gnu/packages/patches/scotch-test-threading.patch: Delete files.
* gnu/packages/patches/scotch-integer-declarations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust as necessary.
2019-01-25 13:10:05 -06:00
Eric Bavier a6b9ebc2fc
gnu: Add Combinatorial BLAS.
* gnu/packages/maths.scm (combinatorial-blas): New variable.
* gnu/packages/patches/combinatorial-blas-awpm.patch,
gnu/packages/patches/combinatorial-blas-io-fix.patch: New files
* gnu/local.mk(dist_patch_DATA): Add them.
2019-01-25 13:09:47 -06:00