941adac603
gnu: python-pdbpp: Update to 0.10.3-0.e1c2e34.
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* gnu/packages/python-xyz.scm (python-pdbpp): Update to 0.10.3-0.e1c2e34.
[arguments]: Add pretend-version phase.
2023-04-24 20:19:23 -04:00
381da6260f
gnu: docker-compose: Use python-jsonschema-3 to fix build.
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* gnu/packages/docker.scm (docker-compose) [inputs]: Replace python-jsonschema
with python-jsonschema-3.
2023-04-24 20:02:26 -04:00
6378c9bb68
gnu: Add python-jsonschema-3.
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* gnu/packages/python-xyz.scm (python-jsonschema-3): New variable.
2023-04-24 20:01:02 -04:00
92dd588b81
Merge remote-tracking branch 'origin/master' into core-updates
2023-04-24 20:43:01 +02:00
c7cdd4a6c7
gnu: emacs-git-timemachine: Update to 4.11-0-13769fb6.
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This fixes #62932 ;
command-execute: Symbol’s function definition is void: define-transient-command
* gnu/packages/emacs-xyz.scm (emacs-git-timemachine)[source]: Update outdated
source URI. Update to commit "13769fb603ae88c64566529eae4525ce88026e86". The
4.11 latest release is four years old.
2023-04-24 20:05:09 +02:00
09d2976c86
gnu: python-plotly-2.4.1: Patch for Python 3.10 changes.
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* gnu/packages/graph.scm (python-plotly-2.4.1)[arguments]: Add phase
'python-compatibility.
2023-04-24 19:49:04 +02:00
bca1496f72
gnu: multiqc: Update to 1.14.
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* gnu/packages/bioinformatics.scm (multiqc): Update to 1.14.
[build-system]: Use pyproject-build-system.
[arguments]: Simplify check phase; restore sanity-check phase.
[propagated-inputs]: Add python-rich-click.
[native-inputs]: Update test data.
2023-04-24 19:49:04 +02:00
523e5ee2f1
gnu: Add python-rich-click.
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* gnu/packages/python-xyz.scm (python-rich-click): New variable.
2023-04-24 19:49:04 +02:00
9703ecc47b
gnu: macs: Patch version check for Python.
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* gnu/packages/bioinformatics.scm (macs)[source]: Patch check for Python >
3.6.
2023-04-24 19:49:04 +02:00
913668e879
gnu: salmon: Update to 1.10.1.
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* gnu/packages/bioinformatics.scm (salmon): Update to 1.10.1.
[inputs]: Replace cereal-1.3.0 with cereal; add htscodecs.
[native-inputs]: Update hash of pufferfish sources.
2023-04-24 19:49:04 +02:00
b8a0a10308
gnu: Add htscodecs.
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* gnu/packages/bioinformatics.scm (htscodecs): New variable.
2023-04-24 19:49:04 +02:00
0bb60ed3ee
gnu: cereal-1.3.0: Update doctest.h.
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* gnu/packages/serialization.scm (cereal-1.3.0)[native-inputs]: Add gcc-10 and
the sources of the cereal package.
[arguments]: Add a phase to replace the included doctest.h with the variant
from the cereal sources; disable -Werror.
[source]: Delete included doctest.h.
2023-04-24 19:49:04 +02:00
93d95bb843
gnu: cereal: Use GCC 10.
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* gnu/packages/serialization.scm (cereal)[native-inputs]: Add gcc-10.
2023-04-24 19:49:04 +02:00
e29571afc6
guix-install.sh: Fix GUIX_ALLOW_OVERWRITE condition.
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Before this change, the "Overwriting existing installation!" would be
displayed erroneously.
* etc/guix-install.sh (sys_create_store): Fix overwrite conditional.
2023-04-24 12:51:41 -04:00
a0d49a726a
gnu: python-check-manifest: Update to 0.49.
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* gnu/packages/python-xyz.scm (python-check-manifest): Update to 0.49.
[propagated-inputs]: Remove python-tomli.
2023-04-24 12:23:49 -04:00
0c297b9b70
gnu: python-eventlet: Skip two failing tests.
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* gnu/packages/python-xyz.scm (python-eventlet)[arguments]: In 'check' phase,
skip two more tests which are failing with Python 3.10 and have upstream bug
reports.
2023-04-24 11:37:16 -04:00
23f11afacd
Add mumi config.
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* .mumi/config: New file.
* .gitignore: Add .mumi/current-issue.
2023-04-24 15:32:54 +01:00
4b7294cfb8
gnu: mumi: Add bash-minimal to inputs.
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* gnu/packages/mail.scm (mumi)[inputs]: Add bash-minimal.
2023-04-24 15:32:54 +01:00
ec020345d1
gnu: mumi: Update to 0.0.5-2.85d5efb.
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* gnu/packages/mail.scm (mumi): Update to 0.0.5-2.85d5efb.
2023-04-24 15:32:54 +01:00
70b52b5614
gnu: mumi: Move to Savannah.
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* gnu/packages/mail.scm (source, home-page): Move to Savannah.
2023-04-24 15:32:54 +01:00
d0575a9847
gnu: dezyne: Update to 2.17.2.
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* gnu/packages/dezyne.scm (dezyne): Update to 2.17.2.
2023-04-24 15:19:16 +02:00
9e81b4da2d
gnu: python-shiboken-2: Do not rely on _Py_Mangle being available.
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* gnu/packages/patches/python-shiboken-2-compat.patch: Fix the patch
according to upstream.
Signed-off-by: Andreas Enge <andreas@enge.fr>
2023-04-24 12:46:42 +02:00
9350347dab
gnu: openshot: Update to 3.1.0.
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* gnu/packages/audio.scm (libopenshot-audio): Update to 0.3.1.
* gnu/packages/video.scm (libopenshot): Update to 0.3.1.
(openshot): Update to 3.1.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-24 12:22:27 +02:00
589aa32fbd
gnu: eid-mw: Update to 5.1.10.
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* gnu/packages/security-token.scm (eid-mw): Update to 5.1.10
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-24 12:18:45 +02:00
f4a6a65d68
gnu: fatrace: Update to 0.17.0.
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* gnu/packages/monitoring.scm (fatrace): Update to 0.17.0
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-04-24 12:17:17 +02:00
a386edb4dc
gnu: openmpi: Update to 4.1.5.
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* gnu/packages/mpi.scm (openmpi): Update to 4.1.5.
2023-04-24 10:29:42 +02:00
7931ac810b
read-print: 'pretty-print-with-comments' keeps newlines on long strings.
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* guix/read-print.scm (printed-string)[preserve-newlines?]: New
procedure.
Use it to preserve newlines on long strings.
* tests/read-print.scm: Add test.
2023-04-24 10:27:13 +02:00
827df9d1dd
gnu: python-magic: Update to 0.4.27.
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* gnu/packages/patches/python-magic-python-bytecode.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu/packages/python-xyz.scm (python-magic): Update to 0.4.27.
[source]<patches>: Remove field.
[#:phases]<check>: Do not invoke ‘tests.py’.
Signed-off-by: Andreas Enge <andreas@enge.fr>
2023-04-24 10:23:59 +02:00
794e8880b9
gnu: openldap-for-linphone: Hide it.
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We don't want this to show up when searching for "openldap".
* gnu/packages/openldap.scm (openldap-for-linphone): Wrap in HIDDEN-PACKAGE
and add a comment.
2023-04-24 09:56:32 +02:00
e2c1506e86
gnu: inspekt3d: Adjust to changes in libfive.
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* gnu/packages/engineering.scm (inspekt3d)[arguments]: Use G-expression; patch
file to avoid loading removed extension; adjust name of libfive library.
2023-04-24 09:53:06 +02:00
2d4888b791
gnu: inspekt3d: Simplify snippet.
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* gnu/packages/engineering.scm (inspekt3d)[source]: Simplify snippet.
2023-04-24 09:52:29 +02:00
9b381235e0
gnu: libfive: Update to 0-5.b1ea998.
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* gnu/packages/engineering.scm (libfive): Update to 0-5.b1ea998.
[arguments]: Set HOME variable to fix autocompilation; set GUILE_CCACHE_DIR to
override default target directory for compiled Guile files; add phases
'fix-library-location and 'install-scm-files.
2023-04-24 09:51:44 +02:00
0094b2b25f
gnu: python-sure: Update to 2.0.1.
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* gnu/packages/python-xyz.scm (python-sure): Update to 2.0.1.
[native-inputs]: Add python-rednose.
2023-04-24 00:25:34 -04:00
519694209e
gnu: python-boltons: Update to 23.0.0.
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* gnu/packages/python-xyz.scm (python-boltons): Update to 23.0.0.
2023-04-24 00:18:50 -04:00
ee40b6684c
gnu: python-pynndescent: Update to 0.5.10.
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* gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.10.
2023-04-23 23:59:22 -04:00
6b9e3f0dd1
gnu: python-configargparse: Update to 1.5.3.
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* gnu/packages/python-xyz.scm (python-configargparse): Update to 1.5.3.
[build-system]: Switch to pyproject-build-system.
[arguments]: Remove previous 'check' phase.
[native-inputs]: Add python-mock and python-pytest, remove python-pyyaml.
2023-04-23 23:39:32 -04:00
a70e9378cd
gnu: python-scikit-learn: Update to 1.2.2.
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* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.2.2.
2023-04-23 22:52:02 -04:00
94f0b9f6bf
gnu: python-joblib: Update to 1.1.1.
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* gnu/packages/python-xyz.scm (python-joblib): Update to 1.1.1.
2023-04-23 22:51:58 -04:00
779575cb33
gnu: python-ecdsa: Fix faulty commit.
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Fix previous commit, which did not properly add the test to be skipped and
repeated the existing skipped test. There is only one new test to be skipped.
* gnu/packages/python-crypto.scm (python-ecdsa)[arguments]: In the 'check'
phase, properly format the string for skipped tests.
2023-04-23 20:59:36 -04:00
94a2e94a26
gnu: python-ecdsa: Skip two failing tests.
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* gnu/packages/python-crypto.scm (python-ecdsa)[arguments]: In 'check' phase,
skip a couple more tests.
2023-04-23 20:48:20 -04:00
4e0186ec7f
gnu: libmediainfo and mediainfo: Update to 23.03.
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* gnu/packages/video.scm (libmediainfo, mediainfo): Update to 23.03.
2023-04-23 20:36:13 -04:00
a0b2b4f1e9
gnu: libmediainfo and mediainfo: Fix build.
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* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Add a shebang to
the autogen.sh script in the 'change-to-build-dir' phases.
2023-04-23 20:36:13 -04:00
5bcf10867d
gnu: eyed3: Update to 0.9.7.
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* gnu/packages/mp3.scm (eyed3): Update to 0.9.7.
[propagated-inputs]: Remove python-grako, python-magic, and python-pathlib.
2023-04-23 20:36:13 -04:00
70117d55f5
gnu: OpenImageIO: Use the correct source hash.
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This is a followup to commit 5fda088fb1
2023-04-23 20:34:57 -04:00
5fda088fb1
gnu: OpenImageIO: Update to 2.2.21.0.
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This fixes the build with GCC 11.
* gnu/packages/graphics.scm (openimageio): Update to 2.2.21.0.
2023-04-23 19:05:16 -04:00
186e516400
gnu: OpenColorIO: Fix build with GCC 11.
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* gnu/packages/patches/opencolorio-fix-build-with-gcc11.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image-processing.scm (opencolorio)[source]: Use it.
2023-04-23 19:05:15 -04:00
2a8e92f2d9
gnu: shotwell: Fix build.
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* gnu/packages/gnome.scm (shotwell)[native-inputs]: Add vala.
2023-04-23 19:05:15 -04:00
bdd48e3cb9
gnu: liblinphone: Restore special openldap variant.
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This is a partial revert of commit f2166cface
2023-04-24 00:12:41 +02:00
bacee2da69
gnu: python-ledgerblue: Disable tests.
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* gnu/packages/finance.scm (python-ledgerblue)[arguments]: Disable
tests (there are none).
2023-04-23 17:07:40 -04:00
e6a88bcf16
gnu: python-django@3.2: Update to 3.2.18.
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Fixes the 'test_custom_fields' failure:
9da46345d8
2023-04-23 22:40:51 +02:00
Maxim Cournoyer
Andreas Enge
Janneke Nieuwenhuizen
Ricardo Wurmus
John Kehayias
Arun Isaac
Josselin Poiret
Andy Tai
Raphaël Mélotte
Ludovic Courtès
Liliana Marie Prikler
Leo Famulari
Ludovic Courtès