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55767 Commits (9f5f3932debc72a57a830fc6ca5ab980f6db4941)

Author SHA1 Message Date
Vinicius Monego 657f8535aa
gnu: Add gmic.
* gnu/packages/image-processing.scm (gmic): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-24 22:10:59 +02:00
Vinicius Monego c53d529f1d
gnu: Add photoflare.
* gnu/packages/photo.scm (photoflare): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-24 22:10:58 +02:00
Marius Bakke cdf6a11880
gnu: python-on-guile: Update to 1.2.3.5.
* gnu/packages/guile-xyz.scm (python-on-guile): Update to 1.2.3.5.
2020-06-24 22:10:58 +02:00
Marius Bakke af91d13385
gnu: cURL: Replace with 7.71.0 [fixes CVE-2020-8169, CVE-2020-8177].
* gnu/packages/curl.scm (curl-7.71.0): New variable.
(curl)[replacement]: New field.
2020-06-24 22:10:58 +02:00
Maxim Cournoyer f9cb49d761
gnu: Add emacs-ob-erlang.
* gnu/packages/emacs-xyz.scm (emacs-ob-erlang): New variable.
2020-06-24 16:03:20 -04:00
Jakub Kądziołka bf2ab0a078
gnu: fd: Update to 8.1.1.
* gnu/packages/rust-apps.scm (fd): Update to 8.1.1.
  [cargo-inputs]: Add rust-anyhow-1.0, rust-dirs-2.0, rust-users-0.10.
  Replace rust-humantime-1.3 with 2, rust-lscolors-0.6 with 0.7,
  rust-num-cpus-1.10 with 1.11.
2020-06-24 21:14:34 +02:00
Jakub Kądziołka eb9b378604
gnu: Add rust-lscolors-0.7.
* gnu/packages/crates-io.scm (rust-lscolors-0.7): New variable.
(rust-lscolors-0.6): Inherit from rust-lscolors-0.7.
2020-06-24 21:14:33 +02:00
Jakub Kądziołka 3e838a21fe
gnu: Add rust-users-0.10.
* gnu/packages/crates-io.scm (rust-users-0.10): New variable.
  (rust-users-0.9): Inherit from rust-users-0.10.
2020-06-24 21:14:33 +02:00
Jakub Kądziołka c434a3fbc0
gnu: Add rust-humantime-2.
* gnu/packages/crates-io.scm (rust-humantime-2): New variable.
  (rust-humantime-1.3): Inherit from rust-humantime-2.
2020-06-24 21:14:33 +02:00
Jakub Kądziołka 4f5c689d10
gnu: Remove rust-humantime-1.2.
* gnu/packages/crates-io.scm (rust-humantime-1.2): Remove variable.
(rust-env-logger-0.5, rust-env-logger-0.6)[arguments]: Replace
rust-humantime-1.2 with 1.3. Don't skip build.
2020-06-24 21:14:32 +02:00
Mathieu Othacehe f56144e18a
system: image: Enable compression on ISO9660 images.
ISO9660 image compression was temporarily disabled to speed-up tests of the
new image API. Enable it again.

* gnu/system/image.scm (iso9660-image)[compression]: Enable it.
2020-06-24 20:50:42 +02:00
Mathieu Othacehe eda3fcfb46
ci: Build Guix System images. 2020-06-24 20:47:35 +02:00
Mathieu Othacehe b904b59ce5
image: Move hurd image definition to a dedicated file.
This moves hurd-disk-image to a dedicated file. It also defines a default
operating-system so that the image can be built standalone.

* gnu/system/images/hurd.scm: New file,
* gnu/local.mk (GNU_SYSTEM_MODULES): add it,
* gnu/system/image.scm (root-offset, root-label): Export it,
(hurd-disk-image): remove it as this is now defined in the new, Hurd dedicated
file above,
(find-image): adapt to avoid loop dependency.
2020-06-24 20:24:34 +02:00
Nicolas Goaziou af0307a099
gnu: symengine: Fix indentation.
* gnu/packages/algebra.scm (symengine): Fix indentation and apply small
cosmetic fixes.
2020-06-24 19:46:55 +02:00
Vinicius Monego 49a2a477c9
gnu: Add python-symengine.
* gnu/packages/python-xyz.scm (python-symengine): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-24 19:39:47 +02:00
Vinicius Monego d0337a226b
gnu: Add symengine.
* gnu/packages/algebra.scm (symengine): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-24 19:38:32 +02:00
Oleg Pykhalov 48eeee818a
gnu: sssd: Fix build.
* gnu/packages/patches/sssd-fix-samba.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add this.
* gnu/packages/sssd.scm (sssd)[source]: Add this.
2020-06-24 18:40:47 +03:00
Ricardo Wurmus f39ef3aef9
gnu: r-fpc: Update to 2.2-6.
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-6.
2020-06-24 17:23:49 +02:00
Ricardo Wurmus 2bceb47cc8
gnu: r-dt: Update to 0.14.
* gnu/packages/statistics.scm (r-dt): Update to 0.14.
2020-06-24 17:23:49 +02:00
Ricardo Wurmus c496c754af
gnu: r-segmented: Update to 1.2-0.
* gnu/packages/statistics.scm (r-segmented): Update to 1.2-0.
2020-06-24 17:23:49 +02:00
Ricardo Wurmus d8c78ea647
gnu: r-knitr: Update to 1.29.
* gnu/packages/statistics.scm (r-knitr): Update to 1.29.
2020-06-24 17:23:49 +02:00
Ricardo Wurmus 7fe6a2f00b
gnu: r-patchwork: Update to 1.0.1.
* gnu/packages/cran.scm (r-patchwork): Update to 1.0.1.
2020-06-24 17:23:49 +02:00
Ricardo Wurmus 30d4e2cb02
gnu: r-ggforce: Update to 0.3.2.
* gnu/packages/cran.scm (r-ggforce): Update to 0.3.2.
2020-06-24 17:23:48 +02:00
Ricardo Wurmus 0ba8408e7c
gnu: r-bookdown: Update to 0.20.
* gnu/packages/cran.scm (r-bookdown): Update to 0.20.
2020-06-24 17:23:48 +02:00
Ricardo Wurmus 89950dd439
gnu: r-docopt: Update to 0.7.1.
* gnu/packages/cran.scm (r-docopt): Update to 0.7.1.
2020-06-24 17:23:48 +02:00
Ricardo Wurmus 55df96b8a8
gnu: r-magick: Update to 2.4.0.
* gnu/packages/cran.scm (r-magick): Update to 2.4.0.
[native-inputs]: Add r-knitr.
2020-06-24 17:23:48 +02:00
Ricardo Wurmus 01d4a5c342
gnu: r-recipes: Update to 0.1.13.
* gnu/packages/cran.scm (r-recipes): Update to 0.1.13.
[propagated-inputs]: Add r-lifecycle.
2020-06-24 17:23:48 +02:00
Ricardo Wurmus 7336ded499
gnu: r-gower: Update to 0.2.2.
* gnu/packages/cran.scm (r-gower): Update to 0.2.2.
2020-06-24 17:23:48 +02:00
Efraim Flashner d739b8d8b8
gnu: libsignal-protocol-c: Don't use unstable tarball.
* gnu/packages/messaging.scm (libsignal-protocol-c)[source]: Download
using git-fetch.
2020-06-24 10:41:50 +03:00
Efraim Flashner 2d84ef328c
gnu: ocaml4.07-piqi: Don't use unstable tarball.
* gnu/packages/ocaml.scm (ocaml4.07-piqi)[source]: Download using
git-fetch.
[arguments]: Add custom phase to make files writable.
2020-06-24 10:35:56 +03:00
Efraim Flashner d5c0b3fa7e
gnu: jmtpfs: Don't use unstable tarball.
* gnu/packages/linux.scm (jmtpfs)[source]: Download using git-fetch.
2020-06-24 10:29:54 +03:00
Efraim Flashner 8de377564e
gnu: pflask: Don't use unstable tarball.
* gnu/packages/linux.scm (pflask)[source]: Download using git-fetch.
2020-06-24 10:27:58 +03:00
Efraim Flashner cfaf5bccb9
gnu: procenv: Don't use unstable tarball.
* gnu/packages/linux.scm (procenv)[source]: Download using git-fetch.
2020-06-24 10:26:20 +03:00
Efraim Flashner eb4cfec276
gnu: ddate: Don't use unstable tarball.
* gnu/packages/linux.scm (ddate)[source]: Download using git-fetch.
2020-06-24 10:23:51 +03:00
Efraim Flashner 2c9cb2f0a1
gnu: java-usb4java: Don't use unstable tarball.
* gnu/packages/libusb.scm (java-usb4java)[source]: Download using
git-fetch.
2020-06-24 10:19:15 +03:00
Efraim Flashner dcd62e8b8d
gnu: antlr3-3.3: Don't propagate antlr3-3.1.
* gnu/packages/java.scm (antlr3-3.3)[propagated-inputs]: Remove antlr3-3.1.
2020-06-24 09:37:10 +03:00
Efraim Flashner 397b9c887c
gnu: python2-zipp-bootstrap: Add missing name field.
* gnu/packages/python-compression.scm (python2-zipp-bootstrap)[name]:
Don't inherit from python2-zipp.
2020-06-24 08:19:43 +03:00
Marius Bakke 4f33bf5709
gnu: python-on-guile: Do not propagate dependencies.
* gnu/packages/guile-xyz.scm (python-on-guile)[propagated-inputs]: Move
everything to ...
[inputs] ... here.
2020-06-24 01:04:15 +02:00
Marius Bakke 862d6a9173
gnu: python-on-guile: Wrap with own Guile modules.
* gnu/packages/guile-xyz.scm (python-on-guile)[arguments]: Add the output
modules to the wrapper.
2020-06-24 01:04:15 +02:00
Marius Bakke ac94458485
gnu: python-on-guile: Update to 1.2.3.4.
* gnu/packages/guile-xyz.scm (python-on-guile): Update to 1.2.3.
[source]: Download from <https://gitlab.com/python-on-guile/python-on-guile>.
[inputs]: Change from GUILE-2.2 to GUILE-3.0.
[arguments]: Add phase augment-GUILE_LOAD_PATH.
2020-06-24 01:04:15 +02:00
Marius Bakke 09f0bc87a9
gnu: guile-persist: Update to 1.2.3.
* gnu/packages/guile-xyz.scm (guile-persist): Update to 1.2.3.
[source](modules, snippet): Remove.
[inputs]: Change from GUILE-2.2 to GUILE-3.0.
2020-06-24 01:04:15 +02:00
Marius Bakke 3a71dac02e
gnu: guile-stis-parser: Update to 1.2.4.1.
* gnu/packages/guile-xyz.scm (guile-stis-parser): Update to 1.2.4.1.
[arguments]: Remove obsolete phase.
[inputs]: Change from GUILE-2.2 to GUILE-3.0.
2020-06-24 01:04:15 +02:00
Ryan Prior aeefe5317d
gnu: Add v.
* gnu/packages/vlang.scm: New file.
* gnu/packages/vlang.scm (v): New variable.
* gnu/local.mk: Add vlang.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-23 23:52:24 +02:00
Robin Templeton 753d75d40b
gnu: flatpak: Fix xdg-dbus-proxy configure flag.
* gnu/packages/package-management.scm (flatpak) [arguments]: Pass the full
"xdg-dbus-proxy" program path to the "--with-system-dbus-proxy" configure
flag.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-23 23:39:42 +02:00
Ricardo Wurmus 501d89d707
gnu: python-pywavelets: Update to 1.1.1.
* gnu/packages/python-xyz.scm (python-pywavelets): Update to 1.1.1.
[arguments]: Update "check" phase.
[native-inputs]: Replace python-nose with python-pytest.
2020-06-23 23:15:55 +02:00
Ricardo Wurmus 88e0101b61
gnu: Add python-imageio.
* gnu/packages/python-xyz.scm (python-imageio): New variable.
2020-06-23 23:15:55 +02:00
Ricardo Wurmus 6bd9e0d501
gnu: Add python-lfdfiles.
* gnu/packages/python-xyz.scm (python-lfdfiles): New variable.
2020-06-23 23:15:55 +02:00
Ricardo Wurmus 09f527827a
gnu: Add python-tifffile.
* gnu/packages/python-xyz.scm (python-tifffile): New variable.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 978d11f96e
gnu: Add python-roifile.
* gnu/packages/python-xyz.scm (python-roifile): New variable.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 5db8ba1f49
gnu: Add python-msgpack-numpy.
* gnu/packages/python-science.scm (python-msgpack-numpy): New variable.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 4be49afabd
gnu: python-scikit-image: Update to 0.17.2.
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.17.2.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 83c116563d
gnu: python-gridmap: Update to 0.14.0.
* gnu/packages/python-xyz.scm (python-gridmap): Update to 0.14.0.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus e8f2ddbb23
gnu: Add python-progressbar2.
* gnu/packages/python-xyz.scm (python-progressbar2): New variable.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 2537a7bf26
gnu: python-pycodestyle: Update to 2.6.0.
* gnu/packages/python-xyz.scm (python-pycodestyle): Update to 2.6.0.
[arguments]: Replace check phase.
[native-inputs]: Add python-pytest.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 4e6387846b
gnu: python-pyflakes: Update to 2.2.0.
* gnu/packages/python-xyz.scm (python-pyflakes): Update to 2.2.0.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 358dda42e7
gnu: python-flake8: Update to 3.8.3.
* gnu/packages/python-xyz.scm (python-flake8): Update to 3.8.3.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus 57be09b207
gnu: python-utils: Update to 2.4.0.
* gnu/packages/python-xyz.scm (python-utils): Update to 2.4.0.
[arguments]: Replace check phase.
2020-06-23 23:15:54 +02:00
Ricardo Wurmus a17e1b9e11
gnu: python-pytest-flakes: Update to 4.0.0.
* gnu/packages/check.scm (python-pytest-flakes): Update to 4.0.0.
[arguments]: Skip broken test.
2020-06-23 23:15:54 +02:00
Marius Bakke a864d40711
gnu: mpv: Use deterministic ordering of shared library dependencies.
Fixes <https://bugs.gnu.org/42025>.
Reported by Msavoritias <marinus.savoritias@disroot.org>.

* gnu/packages/video.scm (mpv)[arguments]: Add phase 'build-reproducibly'.
2020-06-23 22:24:38 +02:00
Marius Bakke e6c2cec217
gnu: ungoogled-chromium: Update to 83.0.4103.116-0.f08ce8b [fixes CVE-2020-6509].
* gnu/packages/chromium.scm (%chromium-version): Set to 83.0.4103.116.
(%ungoogled-origin): Update hash.
2020-06-23 22:24:38 +02:00
Marius Bakke b87840f0d4
gnu: motion: Build with the latest ffmpeg.
* gnu/packages/video.scm (motion)[inputs]: Change from FFMPEG-3.4 to FFMPEG.
2020-06-23 22:24:32 +02:00
Efraim Flashner aa246eaa6b
gnu: openmw: Don't use unstable tarball.
* gnu/packages/game-development.scm (openmw)[source]: Download using
git-fetch.
2020-06-23 19:17:33 +03:00
Efraim Flashner 9b03299544
gnu: go-1.13: Target aarch64-linux for aarch64-linux.
Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=34872>.

* gnu/packages/golang.scm (go-1.13)[arguments]: Set system to
aarch64-linux when building for aarch64-linux. Adjust 'prebuild phase
to skip tests which fail on aarch64-linux.
2020-06-23 19:17:33 +03:00
Efraim Flashner 87e1a1979b
gnu: go-github-com-rcrowley-go-metrics: Skip tests on aarch64-linux.
* gnu/packages/syncthing.scm (go-github-com-rcrowley-go-metrics)
[arguments]: Skip tests when building on or for aarch64-linux.
2020-06-23 19:17:32 +03:00
Kei Kebreau 362ae4313e
gnu: nml: Update to 0.5.2.
* gnu/packages/game-development.scm (nml): Update to 0.5.2.
[source]: Fetch from pypi.
[arguments]: Remove 'fix-pillow' phase and disable tests.
[home-page]: Update URL.
2020-06-23 10:23:00 -04:00
Efraim Flashner 6562a3883f
gnu: pidentd: Don't use unstable tarball.
* gnu/packages/networking.scm (pidentd)[source]: Download using
git-fetch.
2020-06-23 17:12:58 +03:00
Efraim Flashner 59bcda1e8c
gnu: nzbget: Don't use unstable tarball.
* gnu/packages/networking.scm (nzbget)[source]: Download using release
source tarball.
2020-06-23 17:10:34 +03:00
Efraim Flashner a2a7cc9bfc
gnu: lightgbm: Don't use unstable tarball.
* gnu/packages/machine-learning.scm (lightgbm)[source]: Download using
git-fetch.
[arguments]: Adjust custom 'check phase accordingly.
2020-06-23 17:02:04 +03:00
Efraim Flashner 92ecee94dd
gnu: sonata: Don't use unstable tarball.
* gnu/packages/mpd.scm (sonata)[source]: Download using git-fetch.
2020-06-23 16:46:06 +03:00
Efraim Flashner fffe9a1529
gnu: sbcl-md5: Don't use unstable tarball.
* gnu/packages/lisp-xyz.scm (sbcl-md5)[source]: Download using git-fetch.
2020-06-23 16:34:34 +03:00
Efraim Flashner b244722879
gnu: nototools: Don't use unstable tarball.
* gnu/packages/fontutils.scm (nototools)[source]: Download using
git-fetch.
2020-06-23 16:13:41 +03:00
Efraim Flashner 405b9ba048
gnu: fntsample: Don't use unstable tarball.
* gnu/packages/fontutils.scm (fntsample)[source]: Download using
git-fetch.
2020-06-23 16:08:15 +03:00
Efraim Flashner de0f36f0aa
gnu: miniasm: Make sure all phases return #t.
* gnu/packages/bioinformatics.scm (miniasm)[arguments]: Make custom
'install phase return #t.
2020-06-23 16:04:51 +03:00
Efraim Flashner 896f18210b
gnu: miniasm: Don't use unstable tarball.
* gnu/packages/bioinformatics.scm (miniasm)[source]: Download using
git-fetch.
2020-06-23 16:04:04 +03:00
Efraim Flashner b9e1fc2f04
gnu: stumpwm-contrib: Add a source file-name.
* gnu/packages/wm.scm (stumpwm-contrib)[source]: Add file-name field.
2020-06-23 15:56:50 +03:00
Efraim Flashner 09c2fb1238
gnu: libfreenect: Add a source file-name.
* gnu/packages/openkinect.scm (libfreenect)[source]: Add file-name field.
2020-06-23 15:55:27 +03:00
Efraim Flashner 352e09a5b0
gnu: xaos: Add a source file-name.
* gnu/packages/maths.scm (xaos)[source]: Add file-name field.
2020-06-23 15:54:38 +03:00
Efraim Flashner b5698f5b38
gnu: java-picocli: Use a source file-name.
* gnu/packages/java.scm (java-picocli)[source]: Add a file-name field.
2020-06-23 15:53:54 +03:00
Martin Becze 1ed87c010e
gnu: Add go-github-com-emersion-go-imap-idle.
* gnu/packages/golang.scm (go-github-com-emersion-go-imap-idle): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-23 15:11:09 +03:00
Martin Becze 9ba67ef0ea
gnu: Add go-github-com-emersion-go-sasl.
* gnu/packages/golang.scm (go-github-com-emersion-go-sasl): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-23 15:11:08 +03:00
Martin Becze 48ee9aa461
gnu: Add go-github-com-emersion-go-imap.
* gnu/packages/golang.scm (go-github-com-emersion-go-imap): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-23 15:11:08 +03:00
Martin Becze bffb8f3c5f
gnu: Add go-github-com-ddevault-go-libvterm.
* gnu/packages/golang.scm (go-github-com-ddevault-go-libvterm): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-23 15:11:08 +03:00
Martin Becze d6bae2b7bc
gnu: Add go-github-com-danwakefield-fnmatch.
* gnu/packages/golang.scm (go-github-com-danwakefield-fnmatch): New
variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-23 15:11:08 +03:00
Ricardo Wurmus c03cefc3d8
gnu: Add r-kmer.
* gnu/packages/cran.scm (r-kmer): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
2020-06-23 13:43:12 +02:00
Ricardo Wurmus f9b3718568
gnu: Add r-phylogram.
* gnu/packages/cran.scm (r-phylogram): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
2020-06-23 13:43:12 +02:00
Ricardo Wurmus 755733a3fe
gnu: Add r-fourcseq.
* gnu/packages/cran.scm (r-fourcseq): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
2020-06-23 13:43:12 +02:00
Ricardo Wurmus c261a7b39a
gnu: Add r-lsd.
* gnu/packages/cran.scm (r-lsd): New variable.

Co-authored-by: Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
2020-06-23 13:43:12 +02:00
Mathieu Othacehe 380c3e459b
gnu: cuirass: Update to 0.0.1-34.10b16e.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-34.10b16e.
2020-06-23 11:09:24 +02:00
Mathieu Othacehe fd45ecb571
system: image: Remove fakeroot dependencies.
Since c29bb909d2, fakeroot "sed" and "coreutils"
dependencies are now explicit.

* gnu/system/image.scm (system-disk-image): Remove "sed" and "coreutils" from
inputs.
2020-06-23 09:51:20 +02:00
Mathieu Othacehe c29bb909d2
gnu: fakeroot: Do not assume "sed" and "cut" to be available.
* gnu/packages/linux.scm (fakeroot)[inputs]: Add "sed" and "coreutils",
[arguments]: substitute "sed" and "cut" by their absolute path in fakeroot
script. Rename the associated phase from patch-getopt to patch-script.
2020-06-23 09:51:14 +02:00
Mark H Weaver 42a2ee1f92
gnu: linux-libre: Update to 5.4.48.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.48.
(linux-libre-5.4-pristine-source): Update hash.
2020-06-22 21:02:33 -04:00
Mark H Weaver 83cbfa2091
gnu: linux-libre@5.7: Update to 5.7.5.
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.5.
(linux-libre-5.7-pristine-source): Update hash.
2020-06-22 21:02:00 -04:00
Mark H Weaver d460e737a8
gnu: linux-libre@4.19: Update to 4.19.129.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.129.
(linux-libre-4.19-pristine-source): Update hash.
2020-06-22 21:00:50 -04:00
Jakub Kądziołka 2dab855bb1
gnu: sequoia: Update to 0.17.0.
* gnu/packages/sequoia.scm (sequoia): Update to 0.17.0.
  [cargo-inputs]: Add rust-structopt-0.3.
  [phases](unpin-deps): New phase.
2020-06-23 01:42:02 +02:00
Vinicius Monego 62115b7ab7
gnu: liferea: Update to 1.12.8.
* gnu/packages/syndication.scm (liferea): Update to 1.12.8.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:55 +02:00
Marius Bakke 0752dabb40
gnu: mlt: Build with the latest ffmpeg.
* gnu/packages/video.scm (mlt)[inputs]: Change from FFMPEG-3.4 to FFMPEG.
2020-06-22 23:52:55 +02:00
Vinicius Monego d6817e0086
gnu: mlt: Update to 6.20.0.
* gnu/packages/video.scm (mlt): Update to 6.20.0.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:55 +02:00
Vinicius Monego 9305dfb9fd
gnu: darktable: Update to 3.0.2.
* gnu/packages/photo.scm (darktable): Update to 3.0.2.
[arguments]: Compile with clang.  Wrap GSETTINGS_SCHEMAS_DIR.
[license]: Add license information for Rawspeed.
[native-inputs]: Add clang, desktop-file-utils, glib, gobject-instrospection,
llvm, and po4a.  Reorder alphabetically.
[inputs]: Add colord-gtk, cups, graphicsmagick, gsettings-desktop-schemas,
iso-codes, libsecret, lua, openjpeg, and osm-gps-map.  Reorder alphabetically.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:55 +02:00
Simon South a212006048
gnu: jamvm: Fix to work with current gcc and glibc.
* gnu/packages/java.scm (jamvm)[source]: Add patch.
(jamvm-1-bootstrap)[native-inputs]: Remove.
* gnu/packages/patches/jamvm-2.0.0-disable-branch-patching.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:55 +02:00
Giacomo Leidi cf66096d51
gnu: template-glib: Update to 3.34.0.
* gnu/packages/glib.scm (template-glib): Update to 3.34.0.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein 3e84503cb2
gnu: Add python-daemux.
* gnu/packages/tmux.scm (python-daemux): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein 3565a30f70
gnu: Add python-libtmux.
* gnu/packages/tmux.scm (python-libtmux): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein 9d0e87f8ed
gnu: Add python-pyfiglet.
* gnu/packages/python-xyz.scm (python-pyfiglet): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein 24297a9a9c
gnu: Add python-flask-restx.
* gnu/packages/python-web.scm (python-flask-restx): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein 85acb5f53d
gnu: Add python-pytest-flask.
* gnu/packages/python-check.scm (python-pytest-flask): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein 857c63fe03
gnu: Add python-pytest-benchmark.
* gnu/packages/python-check.scm (python-pytest-benchmark): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:54 +02:00
Edouard Klein bb7e9ab755
gnu: Add python-py-cpuinfo.
* gnu/packages/python-xyz.scm (python-py-cpuinfo): New variable.

Signed-off-by: Marius Bakke <marius@gnu.org>
2020-06-22 23:52:53 +02:00
Nicolas Goaziou 68a6070bc3
gnu: Add abe.
* gnu/packages/games.scm (abe): New variable.
2020-06-22 22:06:06 +02:00
Jonathan Brielmaier 5d9540ddcf
gnu: mate: Don't propagate glib:bin.
* gnu/packages/mate.scm (mate)[propagated-inputs]: Remove as the
proper fix arrived from core-updates.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-22 21:28:12 +03:00
Jonathan Brielmaier a2ebd098d7
gnu: mate-common: Update to 1.24.1.
* gnu/packages/mate.scm (mate-common): Update to 1.24.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-22 21:27:38 +03:00
Vinicius Monego bf2ffbcd77
gnu: Add python-pytest-lazy-fixture.
* gnu/packages/check.scm (python-pytest-lazy-fixture): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-22 21:18:40 +03:00
Ricardo Wurmus af02327856
gnu: r-with-tests, r-minimal: Update to 4.0.2.
* gnu/packages/statistics.scm (r-with-tests, r-minimal): Update to 4.0.2.
2020-06-22 18:28:52 +02:00
Mathieu Othacehe 7f75a7ec08
system: image: Remove "image-root" when building raw disk-images.
The "image-root" derivation output is used as a temporary directory that is
passed to mke2fs and mkdosfs later on. By merging the creation of this
directory and the production of partition images, we can get rid of the
derivation.

As mke2fs and mkdosfs are not able to override file permissions, call those
commands with fakeroot. This way, all the image files will be owned by root,
even if image generation is done in an unprivilegded context.

* gnu/system/image.scm (system-disk-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation. Also add
"fakeroot" and its runtime dependencies to the inputs.
* gnu/build/image.scm (make-ext-image, make-vfat-image): Make sure that mke2fs
and mkdosfs are respectively called by fakeroot.
2020-06-22 17:49:19 +02:00
Marius Bakke cf14e67963
gnu: gn: Update to 0.0-1794.eb997b5.
* gnu/packages/build-tools.scm (gn): Update to 0.0-1794.eb997b5.
2020-06-22 17:16:39 +02:00
Marius Bakke 75527eb1cb
gnu: ungoogled-chromium: Update to 83.0.4103.106-0.f08ce8b [security fixes].
This fixes CVE-2020-6465, CVE-2020-6466, CVE-2020-6467, CVE-2020-6468,
CVE-2020-6469, CVE-2020-6470, CVE-2020-6471, CVE-2020-6472, CVE-2020-6473,
CVE-2020-6474, CVE-2020-6475, CVE-2020-6476, CVE-2020-6477, CVE-2020-6478,
CVE-2020-6479, CVE-2020-6480, CVE-2020-6481, CVE-2020-6482, CVE-2020-6483,
CVE-2020-6484, CVE-2020-6485, CVE-2020-6486, CVE-2020-6487, CVE-2020-6488,
CVE-2020-6489, CVE-2020-6490, CVE-2020-6491, CVE-2020-6493, CVE-2020-6494,
CVE-2020-6495, CVE-2020-6496, CVE-2020-6497, and CVE-2020-6498.

* gnu/packages/patches/ungoogled-chromium-system-jsoncpp.patch,
gnu/packages/patches/ungoogled-chromium-system-zlib.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 83.
(%chromium-version): Set to 83.0.4103.106.
(%ungoogled-revision): Set to f08ce8b3f1300ef0750b5d6bf967b9cbbfd9a56d.
(%gentoo-revision, %gentoo-patches, %debian-patches): New variables.
(gentoo-patch, debian-patch): New procedures.
(%chromium-origin, %ungoogled-origin): Update hashes.
(ungoogled-chromium-source): Don't apply patches from %DEBIAN-ORIGIN, but take
%GENTOO-PATCHES, %DEBIAN-PATCHES, and the local patch files.
(ungoogled-chromium)[arguments]: Remove "enable_swiftshader=false" from
 #:configure-flags.  Add "icu_use_data_file=false".  Set CFLAGS in phase.
Remove obsolete substitution.  Adjust install phase to install .so files for
ANGLE and Swiftshader.
[native-inputs]: Change from CLANG-9 to CLANG-10.
[inputs]: Replace ICU4C with ICU4C-67.
(ungoogled-chromium/wayland): Remove obsolete substitution.  Add
"ozone_platform_x11=true" in #:configure-flags.
2020-06-22 17:16:39 +02:00
Marius Bakke 8169cc736a
gnu: icu4c: Add 67.1.
* gnu/packages/icu4c.scm (icu4c-67): New public variable.
2020-06-22 17:16:39 +02:00
Marius Bakke acac3b94d7
gnu: ungoogled-chromium: Specify CPE name.
* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Add CPE-NAME.
2020-06-22 17:16:39 +02:00
Marius Bakke cafc5f8927
gnu: ungoogled-chromium: Remove non-free file.
* gnu/packages/chromium.scm (ungoogled-chromium-source): Remove (unused) SVG
file that is licensed under a NoDerivatives license.
2020-06-22 17:16:39 +02:00
Marius Bakke 3d5a217d5e
gnu: ungoogled-chromium: Build with ffmpeg@4.2.
Fixes <https://bugs.gnu.org/41987>.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.

* gnu/packages/video.scm (ffmpeg-4.2): New public variable.
* gnu/packages/chromium.scm (ungoogled-chromium)[inputs]: Change from FFMPEG
to FFMPEG-4.2.
2020-06-22 17:16:38 +02:00
Marius Bakke 402d03751c
gnu: ffmpeg: Enable rav1e on x86_64 only.
Fixes <https://bugs.gnu.org/41993>.
Reported by Kurt I <gitlabcanada@runbox.com>.

* gnu/packages/video.scm (ffmpeg)[inputs]: Conditionally add RAV1E.
[arguments]: Adjust #:configure-flags accordingly.
2020-06-22 17:16:38 +02:00
Mathieu Othacehe 1cb9effc3e
system: image: Remove "image-root" derivation when building ISO.
The "image-root" derivation output is used as a temporary directory that is
passed to GNU Xorriso later on. By merging the creation of this directory and
the production of an ISO image, we can get rid of the derivation.

* gnu/system/image.scm (system-iso9660-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation.
2020-06-22 17:07:22 +02:00
Mathieu Othacehe 0919d6148f
gnu: xl2tpd: Fix build.
* gnu/packages/vpn.scm (xl2tpd)[arguments]: Substitute hardcoded pppd path
instead of trying to set CFLAGS variable.
2020-06-22 16:48:58 +02:00
Pierre Langlois 6e31d6f3c4
gnu: python-plotly: Update to 4.8.1.
But keep version 2.4.1 around for packages that still need it and for python2
support.

* gnu/packages/graph.scm (python-plotly): Update to 4.8.1.
[source]: Use git-fetch so that tests are also included.
[arguments]: Enable tests.
[home-page]: Follow redirect.
(python-plotly-2.4.1): New variable.
(python2-plotly): Inherit from python-plotly-2.4.1.
* gnu/packages/bioinformatics.scm (python-deeptools)[native-inputs]: Depend on
python-plotly-2.4.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-22 15:44:16 +02:00
Pierre Langlois 3417a25156
gnu: Add python-xarray.
From 27ec21904f769c1e8114f767972d9037e1e9f68a Mon Sep 17 00:00:00 2001
From: Pierre Langlois <pierre.langlois@gmx.com>
Date: Thu, 18 Jun 2020 00:58:02 +0200
Subject: [PATCH 4/5] gnu: Add python-xarray.

* gnu/package/python-science.scm (python-xarray): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-22 15:44:14 +02:00
Pierre Langlois 7fd33283df
gnu: Add python-retrying.
* gnu/packages/python-xyz.scm (python-retrying): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-22 15:44:12 +02:00
Pierre Langlois 20b545f768
gnu: python-pandas: Update to 1.0.5.
But also keep version 0.25.3 around for packages requiring an earlier
versions, as well as version 0.24.2 for a version with python2.

* gnu/packages/python-science.scm (python-pandas): Update to 1.0.5.
[arguments]: Adapt 'patch-which phase.  Add new 'prepare-x phase.  Do not
delete tests that depend on "moto", they are skipped automatically.
[propagated-inputs]: Add python-jinja2.
[inputs]: Add xsel and xclip.
[native-inputs]: Add xorg-server-for-tests so we can test clipboard support.
(python-pandas-0.24): New variable.
(python2-pandas): Inherit from python-pandas-0.25.
* gnu/packages/bioinformatics.scm (python-biom-format)[propagated-inputs]:
Switch to python-pandas-0.25.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-22 15:44:08 +02:00
Pierre Langlois 3a79adab41
gnu: deeptools: Deprecate in favor of python-deeptools.
And make sure python-deeptools's tests are running.

* gnu/packages/bioinformatics.scm (python-deeptools): Fetch source using git.
[native-inputs]: Add python-mock and python-nose.
(deeptools): Mark as deprecated.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-22 15:43:59 +02:00
Ludovic Courtès 955caaab26
self: Build with Guile 3.0.3.
* gnu/packages/guile.scm (guile-3.0/libgc-7): Inherit from GUILE-3.0.3.
2020-06-22 15:42:56 +02:00
Pierre Neidhardt a0dccc71a6
gnu: emacs-helm: Update to 3.6.3.
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.6.3.
2020-06-22 15:05:46 +02:00
Pierre Neidhardt 561aeefb0b
gnu: emacs-helm-fish-completion: Update to 0.5.
* gnu/packages/emacs-xyz.scm (emacs-helm-fish-completion): Update to 0.5.
2020-06-22 15:01:09 +02:00
Guillaume Le Vaillant 69b82c6078
gnu: js8call: Fix build.
* gnu/packages/radio.scm (js8call)[inputs]: Use regular hamlib.
2020-06-22 14:50:50 +02:00
Guillaume Le Vaillant 09e27115d6
gnu: wsjtx: Update to 2.2.1.
* gnu/packages/radio.scm (wsjtx-hamlib): Update to 2.2.1.
  [arguments]: Add a 'fix-tests' phase.
  (wsjtx): Update to 2.2.1.
2020-06-22 14:50:50 +02:00
Guillaume Le Vaillant 0213f0940e
gnu: qgis: Disable some failing tests.
* gnu/packages/geo.scm (qgis)[arguments]: Disable a few more failing tests.
2020-06-22 14:50:50 +02:00
Ricardo Wurmus c89afe7516
gnu: Add r-rgreat.
* gnu/packages/bioconductor.scm (r-rgreat): New variable.
2020-06-22 14:39:03 +02:00
Efraim Flashner 277ac1f242
gnu: rust-libc-0.2: Don't skip build.
* gnu/packages/crates-io.scm (rust-libc-0.2)[arguments]: Don't skip
build.
2020-06-22 14:15:34 +03:00
Efraim Flashner a1b79c09ee
gnu: rust-libc-0.2: Update to 0.2.71.
* gnu/packages/crates-io.scm (rust-libc-0.2): Update to 0.2.71.
2020-06-22 14:15:34 +03:00
Efraim Flashner a56305539f
gnu: rust-rayon-1.3: Rename to rust-rayon-1.
* gnu/packages/crates-io.scm (rust-rayon-1.3): Rename to rust-rayon-1.
(rust-criterion-0.3, rust-criterion-0.2, rust-gimli-0.18,
rust-hashbrown-0.5, rust-indexmap-1.3, rust-jpeg-decoder-0.1,
rust-nasm-rs-0.1, rust-scroll-0.9, rust-syn-1.0, rust-syn-0.15)
[arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
* gnu/packages/video.scm (rav1e)[arguments]: Same.
2020-06-22 14:15:34 +03:00
Efraim Flashner 6c2189c858
gnu: Remove rust-rayon-1.1.
* gnu/packages/crates-io.scm (rust-rayon-1.1): Remove variable.
(rust-criterion-0.2, rust-gimli-0.18, rust-hashbrown-0.5,
rust-jpeg-decoder-0.1, rust-scroll-0.9, rust-syn-0.15)
[arguments]: Replace rust-rayon-1.1 with 1.3.
2020-06-22 14:15:34 +03:00
Efraim Flashner 8781c8edd2
gnu: rust-rayon-core-1.7: Rename to rust-rayon-core-1.
* gnu/packages/crates-io.scm (rust-rayon-core-1.7): Rename to
rust-rayon-core-1.
(rust-criterion-0.2, rust-rayon-1.3, rust-rayon-1.1, rust-rayon-0.8)
[arguments]: Adjust accordingly.
2020-06-22 14:15:34 +03:00
Efraim Flashner 4f76fbfcd9
gnu: Remove rust-rayon-core-1.5.
* gnu/packages/crates-io.scm (rust-rayon-core-1.5): Remove variable.
(rust-criterion-0.2, rust-rayon-1.1) [arguments]: Replace
rust-rayon-core-1.5 with 1.7.
2020-06-22 14:15:33 +03:00
Efraim Flashner df4d2ddaee
gnu: sequoia: Fix typos.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Move unquote next to
the expression it applies to.
2020-06-22 14:15:33 +03:00
Efraim Flashner 6cd7b35544
gnu: rust-regex-1.3: Rename to rust-regex-1.
* gnu/packages/crates-io.scm (rust-regex-1.3): Rename to rust-regex-1.
(rust-ansi-term-0.12, rust-bindgen-0.52, rust-bindgen-0.51,
rust-bindgen-0.50, rust-bindgen-0.37, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.3, rust-console-0.9, rust-console-0.7,
rust-docopt-1.1, rust-env-logger-0.7, rust-env-logger-0.6,
rust-env-logger-0.5, rust-gimli-0.18, rust-globset-0.4,
rust-grep-cli-0.1, rust-grep-matcher-0.1, rust-grep-regex-0.1,
rust-grep-searcher-0.1, rust-ignore-0.4, rust-lalrpop-0.17,
rust-lalrpop-util-0.17, rust-locale-config-0.3, rust-localeconfig-0.2,
rust-nom-5, rust-nom-4.2, rust-once-cell-1.2, rust-proptest-0.9,
rust-proptest-0.8, rust-pulldown-cmark-0.4, rust-regex-automata-0.1,
rust-rusqlite-0.19, rust-scan-fmt-0.2, rust-syn-1.0, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Adjust accordingly.
* gnu/packages/gnome.scm (librsvg-next)[arguments]: Same.
* gnu/packages/rust-apps.scm (fd, ripgrep, tokei, rust-cargo-c)
[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
2020-06-22 14:15:33 +03:00
Efraim Flashner 9c13497df4
gnu: Remove rust-regex-1.1.
* gnu/packages/crates-io.scm (rust-regex-1.1): Remove variable.
(rust-bindgen-0.50, rust-bindgen-0.49, rust-clap-2,
rust-compiletest-rs-0.2, rust-console-0.7, rust-docopt-1.1,
rust-env-logger-0.7, rust-env-logger-0.6, rust-env-logger-0.5,
rust-gimli-0.18, rust-globset-0.4, rust-grep-cli-0.1,
rust-grep-matcher-0.1, rust-grep-regex-0.1, rust-grep-searcher-0.1,
rust-ignore-0.4, rust-nom-5, rust-nom-4.2, rust-once-cell-1.2,
rust-proptest-0.9, rust-proptest-0.8, rust-pulldown-cmark-0.4,
rust-regex-automata-0.1, rust-rusqlite-0.19, rust-syn-0.15,
rust-ucd-parse-0.1, rust-version-sync-0.8) [arguments]: Replace
rust-regex-1.1 with 1.3.
* gnu/packages/rust-apps.scm (ripgrep)[arguments]: Same.
2020-06-22 14:15:33 +03:00
Efraim Flashner 80cfe5458c
gnu: Add rust-once-cell-0.1.
* gnu/packages/crates-io.scm (rust-once-cell-0.1): New variable.
2020-06-22 14:15:33 +03:00
Efraim Flashner f4022d8549
gnu: Add rust-gettext-rs-0.4.
* gnu/packages/crates-io.scm (rust-gettext-rs-0.4): New variable.
2020-06-22 14:15:32 +03:00
Efraim Flashner e1240cb249
gnu: Add rust-gettext-sys-0.19.
* gnu/packages/crates-io.scm (rust-gettext-sys-0.19): New variable.
2020-06-22 14:15:32 +03:00
Efraim Flashner b3987cd3d2
gnu: Add rust-locale-config-0.2.
* gnu/packages/crates-io.scm (rust-locale-config-0.2): New variable.
2020-06-22 14:15:32 +03:00
Efraim Flashner d77146e9fe
gnu: Add rust-proptest-0.7.
* gnu/packages/crates-io.scm (rust-proptest-0.7): New variable.
2020-06-22 14:15:32 +03:00
Efraim Flashner eba1524df2
gnu: Add rust-regex-syntax-0.4.
* gnu/packages/crates-io.scm (rust-regex-syntax-0.4): New variable.
2020-06-22 14:15:32 +03:00
Efraim Flashner 5247f79db6
gnu: Add rust-section-testing-0.0.
* gnu/packages/crates-io.scm (rust-section-testing-0.0): New variable.
2020-06-22 14:15:31 +03:00
Efraim Flashner 7c6948c71e
gnu: rust-tempfile-3.1: Rename to rust-tempfile-3.
* gnu/packages/crates-io.scm (rust-tempfile-3.1): Rename to ...
(rust-tempfile-3): .. this.
(rust-cairo-rs-0.8, rust-cairo-rs-0.7, rust-cc-1.0,
rust-compiletest-rs-0.3, rust-filetime-0.2, rust-gdk-pixbuf-sys-0.9,
rust-gio-sys-0.9, rust-git2-0.11, rust-glib-0.9, rust-glib-0.8,
rust-glib-sys-0.9, rust-gobject-sys-0.9, rust-handlebars-2.0,
rust-lscolors-0.6, rust-native-tls-0.2, rust-nix-0.15, rust-nix-0.14,
rust-no-panic-0.1, rust-pango-sys-0.9, rust-pangocairo-0.10,
rust-proptest-0.9, rust-proptest-0.8, rust-rustdoc-stripper-0.1,
rust-rustls-0.16, rust-rusty-fork-0.2, rust-sourcefile-0.1,
rust-tiff-0.2, rust-tokio-0.2, rust-tokio-fs-0.1, rust-tokio-uds-0.2,
rust-wayland-client-0.23, rust-wayland-client-0.21, rust-xattr-0.2)
[arguments]: Adjust accordingly.
* gnu/packages/rust-apps.scm (rust-cbindgen, tokei)[arguments]: Same.
* gnu/packages/sequoia.scm (sequoia)[arguments]: Same.
* gnu/packages/terminals.scm (alacritty)[arguments]: Same.
2020-06-22 14:15:31 +03:00
Efraim Flashner 0c9bca4ffe
gnu: Remove rust-tempfile-3.0.
* gnu/packages/crates-io.scm (rust-tempfile-3.0): Remove variable.
(rust-compiletest-rs-0.3, rust-filetime-0.2, rust-handlebars-2.0,
rust-nix-0.15, rust-nix-0.14, rust-proptest-0.9, rust-proptest-0.8,
rust-rustls-0.16, rust-rusty-fork-0.2, rust-tiff-0.2, rust-tokei-fs-0.1,
rust-tokio-uds-0.2, rust-xattr-0.2) [arguments]: Replace
rust-tempfile-3.0 with 3.1.
* gnu/packages/rust-apps.scm (tokei)[arguments]: Same.
2020-06-22 14:15:31 +03:00
Efraim Flashner 9f2bb42bee
gnu: rust-proptest-0.9: Update to 0.9.6.
* gnu/packages/crates-io.scm (rust-proptest-0.9): Update to 0.9.
[arguments]: Don't skip build. In cargo-inputs replace rust-rand-0.4
with 0.6, rust-rand-chacha-0.2 with 0.1, rust-rand-xorshift-0.2 with 0.1.
2020-06-22 14:15:28 +03:00
Ricardo Wurmus fae72ebb49
gnu: r-zoo: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-zoo): Move this variable from here...
* gnu/packages/cran.scm (r-zoo): ...to here.
2020-06-22 12:46:03 +02:00
Ricardo Wurmus d30ab75a7d
gnu: r-directlabels: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-directlabels): Move this variable from here...
* gnu/packages/cran.scm (r-directlabels): ...to here.
2020-06-22 12:42:19 +02:00
Ricardo Wurmus 5c1aab1dc1
gnu: r-boruta: Move to (gnu packages cran).
* gnu/packages/statistics.scm (r-boruta): Move this variable from here...
* gnu/packages/cran.scm (r-boruta): ...to here.
2020-06-22 12:39:51 +02:00
Ricardo Wurmus 6c9834f59f
gnu: r-boruta: Fix indentation and description.
* gnu/packages/statistics.scm (r-boruta)[description]: Fix indentation, add
line breaks, and complete the first sentence fragment.
2020-06-22 12:38:41 +02:00
Ricardo Wurmus 62648f4ae3
gnu: r-fit-models: Update to 0.63.
* gnu/packages/statistics.scm (r-fit-models): Update to 0.63.
2020-06-22 12:15:51 +02:00
Ricardo Wurmus 913eaa619c
gnu: r-glmnet: Update to 4.0-2.
* gnu/packages/statistics.scm (r-glmnet): Update to 4.0-2.
[propagated-inputs]: Add r-survival.
2020-06-22 12:15:51 +02:00
Ricardo Wurmus 15bee10afe
gnu: r-rmarkdown: Update to 2.3.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 2.3.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 55e89c6aa6
gnu: r-backports: Update to 1.1.8.
* gnu/packages/statistics.scm (r-backports): Update to 1.1.8.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 3c37c67224
gnu: r-ggplot2: Update to 3.3.2.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.3.2.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus c68914aa15
gnu: r-isoband: Update to 0.2.2.
* gnu/packages/cran.scm (r-isoband): Update to 0.2.2.
[propagated-inputs]: Remove r-rcpp.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus ad85d0d536
gnu: r-zvcv: Update to 2.1.0.
* gnu/packages/cran.scm (r-zvcv): Update to 2.1.0.
[propagated-inputs]: Remove r-partitions; add r-bh, r-dplyr, r-magrittr, and r-rlinsolve.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 22f8260ba1
gnu: r-umap: Update to 0.2.6.0.
* gnu/packages/cran.scm (r-umap): Update to 0.2.6.0.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 4a55cc48b8
gnu: r-ldheatmap: Update to 0.99-8.
* gnu/packages/cran.scm (r-ldheatmap): Update to 0.99-8.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 0319196561
gnu: r-nonnest2: Update to 0.5-4.
* gnu/packages/cran.scm (r-nonnest2): Update to 0.5-4.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 3995c50878
gnu: r-rcppgsl: Update to 0.3.8.
* gnu/packages/cran.scm (r-rcppgsl): Update to 0.3.8.
[native-inputs]: Remove r-knitr.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 2d916665ce
gnu: r-ggeffects: Update to 0.15.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.15.0.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 71017346ad
gnu: r-bayestestr: Update to 0.7.0.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.7.0.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 13141c667b
gnu: r-rstatix: Update to 0.6.0.
* gnu/packages/cran.scm (r-rstatix): Update to 0.6.0.
[propagated-inputs]: Add r-generics.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 5ebef04041
gnu: r-radiant-data: Update to 1.3.9.
* gnu/packages/cran.scm (r-radiant-data): Update to 1.3.9.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 096ecad744
gnu: r-tinytex: Update to 0.24.
* gnu/packages/cran.scm (r-tinytex): Update to 0.24.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus ebd0b2b221
gnu: r-xfun: Update to 0.15.
* gnu/packages/cran.scm (r-xfun): Update to 0.15.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus a7c5df07af
gnu: r-calibrate: Update to 1.7.7.
* gnu/packages/cran.scm (r-calibrate): Update to 1.7.7.
2020-06-22 12:15:50 +02:00
Ricardo Wurmus 5195eeeb07
gnu: r-htmltable: Update to 2.0.0.
* gnu/packages/cran.scm (r-htmltable): Update to 2.0.0.
[native-inputs]: Add r-knitr.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus 3841f83396
gnu: r-htmltools: Update to 0.5.0.
* gnu/packages/cran.scm (r-htmltools): Update to 0.5.0.
[propagated-inputs]: Remove r-rcpp; add r-base64enc.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus cac8cfbc46
gnu: r-v8: Update to 3.2.0.
* gnu/packages/cran.scm (r-v8): Update to 3.2.0.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus ebcebc59ab
gnu: r-hdf5array: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.16.1.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus b07e53bb09
gnu: r-rhdf5: Update to 2.32.1.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.1.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus f65d5e84de
gnu: r-biomart: Update to 2.44.1.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.44.1.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus 55401384dc
gnu: r-genomeinfodb: Update to 1.24.2.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.24.2.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus f7d5721bc2
gnu: r-gdsfmt: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.24.1.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus 1893092d58
gnu: r-cicero: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.6.1.
[propagated-inputs]: Add r-stringi.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus ef58875705
gnu: r-cytoml: Update to 2.0.5.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.0.5.
[propagated-inputs]: Add r-xml2.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus 015ff0bf18
gnu: r-wiggleplotr: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.12.1.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus 8c06ce3c22
gnu: r-regioner: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.20.1.
2020-06-22 12:15:49 +02:00
Ricardo Wurmus 48713c5d94
gnu: Add r-rlinsolve.
* gnu/packages/cran.scm (r-rlinsolve): New variable.
2020-06-22 12:15:49 +02:00
Mathieu Othacehe b7f211bbbc
gnu: cuirass: Update to 0.0.1-33-61cc56f6.
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-33-61cc56f6.
2020-06-22 10:39:24 +02:00
Mathieu Othacehe 10c582fa22
gnu: xl2tpd: Fix typo.
* gnu/packages/vpn.scm (xl2tpd)[arguments]: Turn "-DPPD" into "-DPPPD".
2020-06-22 10:28:00 +02:00
Ricardo Wurmus acba72b914
gnu: express: Update to 1.5.3.
* gnu/packages/bioinformatics.scm (express): Update to 1.5.3.
[source]: Fetch from Github.
[arguments]: Add phase "remove-update-check".
2020-06-22 09:07:51 +02:00
Tobias Geerinckx-Rice 0e0b5977b7
gnu: youtube-dl: Update to 2020.06.16.
* gnu/packages/video.scm (youtube-dl): Update to 2020.06.16.
2020-06-22 02:47:02 +02:00
Tobias Geerinckx-Rice 45ebb59a54
gnu: vmpk: Update home page.
gnu/packages/music.scm (vmpk)[home-page]: Update TLD and use HTTPS.
2020-06-22 02:47:02 +02:00
Jakub Kądziołka f8a28b6c6d
gnu: bison-3.6: Don't change the name of the package.
This is a follow-up to commit 512d23c65d.

* gnu/packages/bison (bison-3.6)[name]: Remove the overridden value.
2020-06-22 02:35:55 +02:00
Mark H Weaver 5a9a438146
gnu: linux-libre@4.14: Update to 4.14.185.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.185.
(linux-libre-4.14-pristine-source): Update hash.
2020-06-21 19:13:29 -04:00
Mark H Weaver f1922ee156
gnu: linux-libre@4.9: Update to 4.9.228.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.228.
(linux-libre-4.9-pristine-source): Update hash.
2020-06-21 19:13:01 -04:00
Mark H Weaver 8e5b17280c
gnu: linux-libre@4.4: Update to 4.4.228.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.228.
(linux-libre-4.4-pristine-source): Update hash.
2020-06-21 19:12:04 -04:00
Peter Lo 1d97e871dd
gnu: Add r-boruta.
* gnu/packages/statistics.scm (r-boruta): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-06-21 18:47:40 -04:00
Nicolas Goaziou 37ab7837e7
gnu: xmoto: Update to 0.6.1.
* gnu/packages/games.scm (xmoto): Update to 0.6.1.
[arguments]: Remove phase installing man pages, now properly handled by the
installation script.
2020-06-22 00:40:10 +02:00
Nicolas Goaziou 9546891f95
gnu: emacs-relint: Update to 1.18.
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.18.
2020-06-21 23:51:19 +02:00
Ludovic Courtès 89ab6bfbf1
gnu: guile: Add 3.0.3.
* gnu/packages/guile.scm (guile-3.0.3): New variable.
2020-06-21 23:37:29 +02:00
Nicolas Goaziou 6d7ed7c050
gnu: Add seahorse-adventures.
* gnu/packages/games.scm (seahorse-adventures): New variable.
2020-06-21 23:14:16 +02:00
Julien Lepiller 3f3c61b8d5
gnu: Add font-mplus-testflight.
* gnu/packages/fonts.scm (font-mplus-testflight): New variable.
2020-06-21 21:43:07 +02:00
Timotej Lazar dbadca9ac7
gnu: k3b: Update to 20.04.2.
* gnu/packages/kde-multimedia.scm (k3b): Update to 20.04.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-21 17:36:41 +02:00
Timotej Lazar c9650cef1e
gnu: k3b: Note the runtime dependency on udisks-service.
* gnu/packages/kde-multimedia.scm (k3b)[description]: Note that udisks-service
should be enabled.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-21 17:36:41 +02:00
Timotej Lazar 4aa89a0914
gnu: k3b: Add inputs for libraries loaded at runtime.
Patch the source to load these from absolute paths. Actual loading is done by
the Qt library, so we cannot use k3b’s runpath.

* gnu/packages/kde-multimedia.scm (k3b)[inputs]: Add libcdio-paranoia and
libdvdcss.
[arguments]<#:phases>[set-absolute-library-paths]: New phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-21 17:36:41 +02:00
Timotej Lazar 7afaab8bef
gnu: k3b: Add inputs for external programs.
* gnu/packages/kde-multimedia.scm (k3b)[inputs]: Add cdrdao, dvd+rw-tools,
libburn and sox.
[arguments]<#:phases>[wrap-path]: New phase to wrap the binary with paths to
the above.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-21 17:36:40 +02:00
Timotej Lazar f458958543
gnu: Add cdrdao.
* gnu/packages/cdrom.scm (cdrdao): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-21 17:36:40 +02:00
Leo Prikler bdafdfcec9
gnu: add convmv.
* gnu/packages/convmv.scm: New file.
* gnu/local.mk: Add it to build.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2020-06-21 15:53:06 +02:00
Julien Lepiller 5dca64fc97
gnu: Add font-fontna-yasashisa-antique.
gnu/packages/fonts.scm (font-fontna-yasashisa-antique): New variable.
2020-06-21 15:50:16 +02:00
Jan (janneke) Nieuwenhuizen b7249aa472
services: childhurd: Support more than one instance.
* gnu/services/virtualization.scm (<hurd-vm-configuration>)[options]: Remove
"--hda" option.
[id,net-options]: New fields.
(hurd-vm-net-options): New procedure.  Parameterize port forwarding with ID.
* gnu/services/virtualization.scm (hurd-vm-shepherd-service): Use them.
Parameterize provision with ID, if set.  Hardcode "--hda" option for image.
* doc/guix.texi (Virtualization Services): Document new fields.  Update for
hardcoding of "--hda".
2020-06-21 12:51:36 +02:00
B. Wilson 512d23c65d
gnu: Add poke.
* gnu/packages/engineering.scm (poke): New variable.
* gnu/packages/bison.scm (bison-3.6): New variable.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2020-06-21 11:06:53 +02:00
Kyle Meyer 292b26d4e5
gnu: git-annex: Update to 8.20200617.
* gnu/packages/haskell-apps.scm (git-annex): Update to 8.20200617.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-21 10:33:32 +03:00
Vinicius Monego 11fab4a85a
gnu: emacs-hy-mode: Update to 1.0.4.
* gnu/packages/emacs-xyz.scm (emacs-hy-mode): Update to 1.0.4.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2020-06-21 11:42:14 +08:00
Brice Waegeneire f6c6970e0d
system: Add 'sg' and 'newgrp' to %SETUID-PROGRAMS.
* gnu/system.scm (%setuid-programs): Add 'sg' and 'newgrp'.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2020-06-21 11:35:55 +08:00
Nicolas Goaziou 027285691a
gnu: xmoto: Unbundle ODE and libccd.
* gnu/packages/games.scm (xmoto): Unbundle ODE and libccd.
[inputs]: Add ode.
2020-06-21 01:47:05 +02:00
Nicolas Goaziou fb5296605e
gnu: xmoto: Update to 0.6.0-0-f7ca787.
* gnu/packages/games.scm (xmoto): Update to 0.6.0-0-f7ca787.
[source]: Remove patches.
[arguments]: Remove make-flags keyword.
* gnu/packages/patches/xmoto-remove-glext.patch:
* gnu/packages/patches/xmoto-reproducible.patch:
* gnu/packages/patches/xmoto-utf8.patch: Delete files.
* gnu/local.mk: Register previous deletions.
2020-06-21 00:45:08 +02:00
Nicolas Goaziou a70e2f0f07
gnu: emacs-hyperbole: Use inputs instead of propagated inputs.
* gnu/packages/emacs-xyz.scm (emacs-hyperbole)[arguments]: Replace domainname
with dnsdomainname, not hostname.
[propagated-inputs]: move to...
[inputs]: ...this.
2020-06-21 00:13:38 +02:00
Pierre Langlois 377a5f65ed
gnu: emacs-magit: Update to 0746bf1b.
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 0746bf1b.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-21 00:02:15 +02:00
Nicolas Goaziou 915d898f15
gnu: emacs-hyperbole: Update to 7.0.6.
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 7.0.6.
[source]: Use GNU ELPA URL.  Remove some patches.
[arguments]: Add phase.
* gnu/packages/patches/emacs-hyperbole-do-not-check-dir.patch: Delete file.
* gnu/packages/patches/emacs-hyperbole-domainname.patch: Delete file.
* gnu/local.mk: Register sole patch.
2020-06-20 23:41:45 +02:00
Ludovic Courtès 9015ed6688
gnu: gnutls: Pass #:tests? unconditionally.
* gnu/packages/tls.scm (gnutls)[arguments]: Add #:tests? unconditionally.
2020-06-20 23:36:02 +02:00
Ludovic Courtès 9ee8b41f2b
gnu: gnutls: Leave #:disallowed-references empty for GNU/Hurd.
Partly fixes <https://bugs.gnu.org/41775>.

This is a followup to a9bcc64746.

* gnu/packages/tls.scm (gnutls)[arguments]: Let #:disallowed-references
empty when 'hurd-target?' returns true.
2020-06-20 23:36:01 +02:00
Leo Famulari 8562124862
gnu: Mutt: Update to 1.14.4.
* gnu/packages/mail.scm (mutt): Update to 1.14.4.
2020-06-20 17:28:14 -04:00
LaFreniere, Joseph 7d80d79524
gnu: Add emacs-hyperbole.
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Add at 7.0.3

Signed-off-by: Jakub Kądziołka <kuba@kadziolka.net>
2020-06-20 21:18:24 +02:00
Jakub Kądziołka ef6d3b6436
gnu: Add hashcash.
* gnu/packages/networking.scm (hashcash): New variable.
2020-06-20 20:05:55 +02:00
Nicolas Goaziou 4330cca8de
gnu: hydrogen: Update to 1.0.0-rc1.
* gnu/packages/music.scm (hydrogen): Update to 1.0.0-rc1.
2020-06-20 12:49:59 +02:00
Alex Sassmannshausen aed0d0fd73
gnu: guile-config: Update to 0.4.2.
* gnu/packages/guile-xyz.scm (guile-config): Update to 0.4.2.
2020-06-20 11:58:03 +02:00
Vagrant Cascadian d72009bf08
gnu: diffoscope: Update to 148.
* gnu/packages/diffoscope (diffoscope): Update to 148.
  [arguments] Remove add-known-tools phase, fixed upstream.
2020-06-19 14:06:29 -07:00
Tobias Geerinckx-Rice 748a167c81
gnu: sudo: Update to 1.9.1.
* gnu/packages/admin.scm (sudo): Update to 1.9.1.
2020-06-19 11:49:58 +02:00
Jan (janneke) Nieuwenhuizen f25e8f76fe
hurd-boot: Use 'setxattr' instead of invoking settrans.
Note: Using `getxattr' on the Hurd instead of running showtrans does not
work (yet?).

* gnu/build/hurd-boot.scm (setup-translator): Use 'setxattr' instead of
invoking settrans.
* gnu/system.scm (hurd-multiboot-modules): Add --x-xattr-translator-records to
enable xattr-embedding of translators.
2020-06-19 10:40:53 +02:00
Jan (janneke) Nieuwenhuizen 951847ee37
hurd-boot: Create individual translators instead of running MAKEDEV.
* gnu/build/hurd-boot.scm (make-hurd-device-nodes): Do not create
dev/{null,zero,full,random,urandom} mount points.
(passive-translator-xattr?, passive-translator-installed?, translated?,
set-translator, set-hurd-device-translators): New procedures.
(false-if-EEXIST): New macro.
(boot-hurd-system): Use them instead of running MAKEDEV.
2020-06-19 10:38:26 +02:00
Maxim Cournoyer 04a4af6dd4
uuid: Prevent a loop on invalid arguments.
* gnu/system/uuid.scm (uuid=?): Use type predicates in the fallback case to
prevent looping on invalid arguments.
2020-06-18 23:24:37 -04:00
Maxim Cournoyer 0dd04b9986
machine: ssh: Fix guix deploy hang when using non-DCE UUIDs.
Fixes <https://issues.guix.gnu.org/issue/41237>.

The UUID type information was lost when passing to the lower gexp code strata,
which led to not being able to recreate the UUID in the generated script.
This occurred for non-DCE type UUIDs such as that of a FAT file system.

A following commit will prevent the find-partition-by-uuid procedure from
entering a loop when its UUID argument is invalid.

Reported-by: Brice Waegeneire <brice@waegenei.re>

* gnu/machine/ssh.scm (machine-check-file-system-availability): Replace the
STRING->UUID procedure by the UUID macro, and provide the UUID type as its
second argument.
2020-06-18 23:20:41 -04:00
Ryan Prior via Guix-patches via e520aa8f41
gnu: oil: Update to 0.8.pre6.
* gnu/packages/shells.scm (oil): Update to 0.8.pre6.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-19 00:14:38 +02:00
Simen Endsjø 7fd5f901f6
gnu: Add Iosevka quasi-proportioal fonts.
* gnu/packages/fonts.scm (font-iosevka-aile, font-iosevka-etoile,
font-iosevka-sparkle): New variables.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-18 23:50:14 +02:00
Simen Endsjø f3396e7884
gnu: Update Iosevka fonts from 2.3.3 to 3.1.1.
* gnu/packages/fonts.scm (font-iosevka):
(font-iosevka-slab):
(font-iosevka-term):
(font-iosevka-term-slab): Update to 3.1.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-18 23:49:11 +02:00
Nicolas Goaziou 3328e36438
gnu: emacs-leaf: Update to 4.2.5.
* gnu/packages/emacs-xyz.scm (emacs-leaf): Update to 4.2.5.
[source]: Switch to GNU ELPA URL.
2020-06-18 23:37:41 +02:00
Mark H Weaver 1d763933b8
gnu: linux-libre@5.7: Update to 5.7.4.
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.4.
(linux-libre-5.7-pristine-source): Update hash.
2020-06-18 15:59:33 -04:00
Guillaume Le Vaillant 8fdd0da49c
gnu: Add multimon-ng.
* gnu/packages/radio.scm (multimon-ng): New variable.
2020-06-18 18:31:09 +02:00
Jakub Kądziołka f43e410470
gnu: Add unicorn.
* gnu/packages/emulators.scm (unicorn): New variable.
2020-06-18 18:08:50 +02:00
Pierre Neidhardt 89c98c063a
gnu: Add cluffer.
* gnu/packages/lisp-xyz.scm (cl-cluffer, sbcl-cluffer): New variables.
2020-06-18 17:48:13 +02:00
Pierre Neidhardt d6ad0b7248
gnu: Add sbcl-cluffer-simple-buffer.
* gnu/packages/lisp-xyz.scm (sbcl-cluffer-simple-buffer): New variable.
2020-06-18 17:47:58 +02:00
Pierre Neidhardt 5e3fcdf8f6
gnu: Add sbcl-cluffer-simple-line.
* gnu/packages/lisp-xyz.scm (sbcl-cluffer-simple-line): New variable.
2020-06-18 17:47:45 +02:00
Pierre Neidhardt 37f2d5835e
gnu: Add sbcl-cluffer-standard-buffer.
* gnu/packages/lisp-xyz.scm (sbcl-cluffer-standard-buffer): New variable.
2020-06-18 17:47:30 +02:00
Pierre Neidhardt a4a24f66fa
gnu: Add sbcl-cluffer-standard-line.
* gnu/packages/lisp-xyz.scm (sbcl-cluffer-standard-line): New variable.
2020-06-18 17:47:10 +02:00
Pierre Neidhardt 19a1a98fb4
gnu: Add sbcl-cluffer-base.
* gnu/packages/lisp-xyz.scm (sbcl-cluffer-base): New variable.
2020-06-18 17:46:53 +02:00
Pierre Neidhardt 409fcee9e5
gnu: Add clump.
* gnu/packages/lisp-xyz.scm (cl-clump, sbcl-clump): New variables.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt 106354eaa4
gnu: Add sbcl-clump-binary-tree.
* gnu/packages/lisp-xyz.scm (sbcl-clump-binary-tree): New variable.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt ba1727b041
gnu: Add sbcl-clump-2-3-tree.
* gnu/packages/lisp-xyz.scm (sbcl-clump-2-3-tree): New variable.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt 797f43af75
gnu: sbcl-triva: Remove ASD component fix.
* gnu/packages/lisp-xyz.scm (sbcl-triva)[arguments]: Remove 'remove-component
phase now that our build system supports component-less .asd files.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt 6f51791022
gnu: sbcl-triva.trivial: Remove ASD component fix.
* gnu/packages/lisp-xyz.scm (sbcl-triva.trivial)[arguments]: Don't replace
create-asd-file phase now that our build system supports component-less .asd
files.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt 7432a419b8
gnu: sbcl-fare-quasiquote-readtable: Remove ASD component fix.
* gnu/packages/lisp-xyz.scm (sbcl-fare-quasiquote-readtable)[arguments]: Remove
'fix-asd-file phase now that our build system supports component-less .asd
files.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt 74fb7f900e
gnu: cl-cxml: Remove ASD fix since our build system supports component-less asd.
* gnu/packages/lisp-xyz.scm (cl-cxml)[arguments]: Remove 'remove-component phase.
2020-06-18 17:14:08 +02:00
Pierre Neidhardt 04dd80181f
gnu: Add acclimation.
* gnu/packages/lisp-xyz.scm (cl-acclimation, sbcl-acclimation): New variables.
2020-06-18 17:14:08 +02:00
Efraim Flashner 9f4cb9986f
gnu: rust-adler32-1: Update to 1.1.0.
* gnu/packages/crates-io.scm (rust-adler32-1): Update to 1.1.0.
[arguments]: Don't skip build. Add rust-compiler-builtins-0.1,
rust-rustc-std-workspace-core-1.0 to cargo-inputs. Add rust-bencher-0.1
to cargo-development-inputs.
2020-06-18 16:38:12 +03:00
Efraim Flashner 67b04b82c2
gnu: rust-adler32-1.0: Rename rust-adler32-1.
* gnu/packages/crates-io.scm (rust-adler32-1.0): Rename to
rust-adler32-1.
(rust-deflate-0.7, rust-inflate-0.4, rust-miniz-oxide-0.3): Adjust
accordingly.
2020-06-18 16:37:03 +03:00
Efraim Flashner c54bc9bd55
gnu: rust-libgit2-sys-0.7: Don't hide package.
* gnu/packages/crates-io.scm (rust-libgit2-sys-0.7)[source]: Remove
bundled code.
[arguments]: Add rust-curl-sys-0.4, rust-libc-0.2, rust-libssh2-sys-0.2,
rust-libz-sys-1.0, rust-openssl-sys-0.9, rust-cc-1.0,
rust-pkg-config-0.3 to cargo-inputs.
[properties]: Remove field.
2020-06-18 16:27:00 +03:00
Efraim Flashner b1ff69195a
gnu: rust-curl-sys-0.4: Don't hide package.
* gnu/packages/crates-io.scm (rust-curl-sys-0.4)[source]: Remove bundled
code.
[arguments]: Add rust-libc-0.2, rust-libnghttp2-sys-0.1,
rust-libz-sys-1.0, rust-openssl-sys-0.9, rust-winapi-0.3, rust-cc-1.0,
rust-pkg-config-0.3, rust-vcpkg-0.2 to cargo-inputs. Add custom phase to
find system openssl.
[native-inputs]: Add pkg-config.
[inputs]: Add curl, nghttp2, openssl, zlib.
[properties]: Remove field.
2020-06-18 16:25:01 +03:00
Efraim Flashner e587a8086b
gnu: rust-libnghttp2-sys-0.1: Don't hide package.
* gnu/packages/crates-io.scm (rust-libnghttp2-sys-0.1)[source]: Remove
bundled code.
[arguments]: Skip build. Add rust-libc-0.2, rust-cc-1.0 to cargo-inputs.
[inputs]: Add nghttp2.
[properties]: Remove field.
2020-06-18 16:22:26 +03:00
Martin Becze 69288a849a
gnu: go-ipfs: Update to 0.5.1.
* gnu/packages/ipfs.scm (go-ipfs): Update to 0.5.1

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-18 14:48:18 +02:00
Ludovic Courtès 97a46055ca
database: 'register-items' takes an open database.
* guix/store/database.scm (store-database-directory)
(store-database-file): New procedures.
(call-with-database): Add call to 'mkdir-p'.
(register-items): Add 'db' parameter and remove #:state-directory and #:schema.
(register-path): Use 'store-database-file' and 'with-database', and
parameterize SQL-SCHEMA.
* gnu/build/image.scm (register-closure): Likewise.
* gnu/build/vm.scm (register-closure): Likewise.
* guix/scripts/pack.scm (store-database)[build]: Likewise.
2020-06-18 14:48:17 +02:00
Brice Waegeneire e418c3d076
gnu: privoxy: Fix daemon with default configuration.
* gnu/packages/tor.scm (privoxy)[arguments]: Add --localstatedir=/var to
configure flags.  Patch default configuration to disable logging and thus
allowing non-root users to use it.

Signed-off-by: Pierre Neidhardt <mail@ambrevar.xyz>
2020-06-18 09:39:35 +02:00
Jan (janneke) Nieuwenhuizen f817a0c095
system: hurd: Add "/bin/sh" and "/usr/bin/env".
* gnu/system/hurd.scm (%base-services/hurd): Add extra-special-files "/bin/sh"
and "/usr/bin/env".
2020-06-18 09:38:53 +02:00
Efraim Flashner 3cd7403584
gnu: mutt: Update to 1.14.3.
* gnu/packages/mail.scm (mutt): Update to 1.14.3.
2020-06-18 10:37:21 +03:00
Jan (janneke) Nieuwenhuizen 2df4ef03f0
gnu: guix: Update to 1.1.0-12.c00564192a.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-12.c00564192a.
2020-06-18 09:28:17 +02:00
Jan (janneke) Nieuwenhuizen c00564192a
gnu: coreutils: Update broken tests for the Hurd.
* gnu/packages/base.scm (coreutils)[arguments]: When compiling for the Hurd,
remove hanging "timeout-group" test.  Remove tests "shred-passes", "l-chunk"
and "stats" from XFAIL_TESTS, they pass now.
2020-06-18 09:25:20 +02:00
Mark H Weaver 416439263c
gnu: icecat: Remove the bundled Onion Browser Button [security].
Fixes <https://bugs.gnu.org/35728>.

The Onion Browser Button (tortm-browser-button@jeremybenthum) version 0.1.8,
available from addons.mozilla.org and bundled with IceCat, malfunctions with
both IceCat 68.9 and Firefox ESR 68.9.  It tells the user that it's connected
to Tor, but fails to route traffic through it.  The same happens on Debian 9
with its "firefox-esr" package.

Remove this extension from IceCat, pending further investigation.

* gnu/packages/gnuzilla.scm (icecat-source): Remove the "data/extensions/
tortm-browser-button@jeremybenthum" directory before running makeicecat.
2020-06-18 03:13:08 -04:00
Maxim Cournoyer 620796e66b
gnu: lib2geom: Fix tests on aarch64, i686-linux architectures.
Fixes <http://issues.guix.gnu.org/41827>.

This change also removes obsolete patches.

* gnu/packages/patches/lib2geom-fix-tests.patch: New file.
* gnu/packages/patches/lib2geom-link-tests-against-glib.patch: Delete file.
* gnu/packages/patches/lib2geom-use-system-googletest.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/graphics.scm (lib2geom)[origin]: Use new patch.
2020-06-18 02:25:49 -04:00
Mark H Weaver c7c7e115d0
gnu: linux-libre: Update to 5.4.47
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.47
(linux-libre-5.4-pristine-source): Update hash.
2020-06-18 01:03:47 -04:00
Mark H Weaver f4f5adcb50
gnu: linux-libre@5.7: Update to 5.7.3
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.3
(linux-libre-5.7-pristine-source): Update hash.
2020-06-18 01:03:27 -04:00
Tobias Geerinckx-Rice 85c4364c78
gnu: wesnoth: Update to 1.14.13.
* gnu/packages/games.scm (wesnoth): Update to 1.14.13.
2020-06-18 02:44:26 +02:00
Tobias Geerinckx-Rice 667e3f490a
gnu: meshlab: Update to 2020.06.
* gnu/packages/engineering.scm (meshlab): Update to 2020.06.
2020-06-18 02:44:26 +02:00
Tobias Geerinckx-Rice 654c13f6c1
gnu: perl-date-manip: Update to 6.82.
* gnu/packages/perl.scm (perl-date-manip): Update to 6.82.
2020-06-18 02:44:26 +02:00
Tobias Geerinckx-Rice be2278afab
gnu: perl-getopt-long: Update to 2.51.
* gnu/packages/perl.scm (perl-getopt-long): Update to 2.51.
2020-06-18 02:44:25 +02:00
Tobias Geerinckx-Rice 12f9c50ac4
gnu: perl-yaml: Update to 1.30.
* gnu/packages/perl.scm (perl-yaml): Update to 1.30.
2020-06-18 02:44:25 +02:00
Tobias Geerinckx-Rice 5b186c7117
gnu: perl-text-csv-xs: Update to 1.43.
* gnu/packages/perl.scm (perl-text-csv-xs): Update to 1.43.
2020-06-18 02:44:25 +02:00
Tobias Geerinckx-Rice 8952889636
gnu: handbrake: Update to 1.3.3.
* gnu/packages/video.scm (handbrake): Update to 1.3.3.
2020-06-18 02:44:25 +02:00
Leo Famulari eaca906219
gnu: VLC: Find dav1d via FFmpeg.
* gnu/packages/video.scm (vlc)[inputs]: Remove dav1d.
2020-06-17 17:32:30 -04:00
Leo Famulari e68dd68ffe
gnu: FFmpeg: Update to 4.3.
* gnu/packages/video.scm (ffmpeg): Update to 4.3.
[source]: Remove obsolete patch.
[inputs]: Add rav1e.
[arguments]: Pass "--enable-librav1e" to #:configure-flags.
(ffmpeg-3.4): Don't build with librav1e.
[inputs]: Remove rav1e.
[arguments]: Remove "--enable-librav1e" from #:configure-flags.
* gnu/packages/patches/ffmpeg-prefer-dav1d.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2020-06-17 17:32:30 -04:00
Tobias Geerinckx-Rice 5e5776dfde
gnu: bind: Update to 9.16.4 [fixes CVE-2020-8618 & CVE-2020-8619].
* gnu/packages/dns.scm (isc-bind): Update to 9.16.4.
2020-06-17 21:28:14 +02:00
Maxim Cournoyer 19ca982861
gnu: Add anubis.
* gnu/packages/mail.scm (anubis): New variable.
2020-06-17 14:28:11 -04:00
Maxim Cournoyer 3b3e392196
gnu: Add emacs-dvc.
* gnu/packages/emacs-xyz.scm (emacs-dvc): New variable.
2020-06-17 14:14:43 -04:00
Maxim Cournoyer 2915a7604a
gnu: supercollider: Enable all tests.
* gnu/packages/audio.scm (supercollider)[phases]{set-home, prepare-x}: New
phases.
{disable-broken-tests}: Delete phase.
{patch-scclass-dir}: Adapt accordingly.
[native-inputs]: Add xorg-server-for-tests.
2020-06-17 13:50:37 -04:00
Maxim Cournoyer a563848347
gnu: supercollider: Move the unbundling phase to a snippet.
* gnu/packages/audio.scm (supercollider)[phases]{rm-bundled-libs}: Move to...
[origin]{snippet}: ...here.
2020-06-17 13:50:37 -04:00
Ludovic Courtès 9c8893ce20
gnu: gnurl: Update home page.
* gnu/packages/gnunet.scm (gnurl): Update 'home-page'.
2020-06-17 19:32:39 +02:00
Zhu Zihao 94e72b7502
gnu: font-sarasa-gothic: Update to 0.12.7
From 5e41fcb899267b6854990e79edca3526e90ebb11 Mon Sep 17 00:00:00 2001
From: Zhu Zihao <all_but_last@163.com>
Date: Wed, 17 Jun 2020 21:33:01 +0800
Subject: [PATCH] gnu: font-sarasa-gothic: Update to 0.12.7

Signed-off-by: Leo Famulari <leo@famulari.name>
2020-06-17 13:29:16 -04:00
Tobias Geerinckx-Rice 0bed485a39
gnu: vlc: Update to 3.0.11.
* gnu/packages/video.scm (vlc): Update to 3.0.11.
2020-06-17 18:42:09 +02:00
Tobias Geerinckx-Rice 32d531eef8
gnu: foo2zjs: Update to 20200610.
* gnu/packages/cups.scm (foo2zjs): Update to 20200610.
2020-06-17 18:42:09 +02:00
Tobias Geerinckx-Rice ccc960bb9f
gnu: xmobar: Update to 0.34.
* gnu/packages/wm.scm (xmobar): Update to 0.34.
2020-06-17 18:42:08 +02:00
Tobias Geerinckx-Rice ad9db848b0
gnu: nix: Update to 2.3.6.
* gnu/packages/package-management.scm (nix): Update to 2.3.6.
2020-06-17 18:42:07 +02:00
Maxim Cournoyer 7fcf4fa082
gnu: linphoneqt: Remove obsolete phase.
Now that we have Qt 5.14, having SOURCE_DATE_EPOCH set prevents
reproducibility problems with the Qt Resource Compiler (this was fixed
upstream in Qt 5.13).

* gnu/packages/linphone.scm (linphoneqt)[phases]: Remove obsolete
'set-qt-rcc-source-date-override phase.
2020-06-17 09:50:44 -04:00
Maxim Cournoyer cb4b60bcee
gnu: emacs-elpy: Disable two tests that fail when building with Emacs 27.
* gnu/packages/emacs-xyz.scm (emacs-elpy)[phases]{disable-problematic-tests}:
New phase.
2020-06-17 09:50:44 -04:00
Maxim Cournoyer b8744955f5
gnu: emacs-elpy: Update to 1.34.0.
* gnu/packages/emacs-xyz.scm (emacs-elpy): Update to 1.34.0.
2020-06-17 09:50:43 -04:00
Timotej Lazar 916003fa33
gnu: xsnow: Update to 2.0.22.
* gnu/packages/toys.scm (xsnow): Update to 2.0.22.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-17 16:32:02 +03:00
Mathieu Othacehe e3c6768822
gnu: guix: Update to 1.1.0-11.204623b.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-11.204623b.
2020-06-17 14:41:46 +02:00
Efraim Flashner 204623bc68
gnu: znc: Update home-page.
* gnu/packages/messaging.scm (znc)[home-page]: Follow redirect.
2020-06-17 14:52:21 +03:00
Timotej Lazar df3a461184
gnu: znc: Use HTTPS.
* gnu/packages/messaging.scm (znc)[source]: Use HTTPS.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-17 14:49:23 +03:00
Efraim Flashner 7b3cb5acb8
gnu: efl: Update to 1.24.3.
* gnu/packages/enlightenment.scm (efl): Update to 1.24.3.
[arguments]: Remove opengl flags from configure-flags.
2020-06-17 14:46:43 +03:00
Efraim Flashner ee3eba3b8b
gnu: kodi: Update to 18.7.1.
* gnu/packages/kodi.scm (kodi): Update to 18.7.1.
2020-06-17 14:46:43 +03:00
Tobias Geerinckx-Rice 18debc6e4f
gnu: mgba: Update to 0.8.2.
* gnu/packages/emulators.scm (mgba): Update to 0.8.2.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice ec40d24fb9
gnu: rocksdb: Update to 6.10.2.
* gnu/packages/databases.scm (rocksdb): Update to 6.10.2.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice 6d164aecc8
gnu: sbsigntools: Update to 0.9.4.
* gnu/packages/efi.scm (sbsigntools): Update to 0.9.4.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice 0f27f41d59
gnu: hplip: Update to 3.20.6.
* gnu/packages/cups.scm (hplip): Update to 3.20.6.
2020-06-17 13:34:27 +02:00
Tobias Geerinckx-Rice a7d74db93d
gnu: corsix-th: Update to 0.64.
* gnu/packages/games.scm (corsix-th): Update to 0.64.
2020-06-17 13:34:27 +02:00
Mathieu Othacehe 92d8c4aa38
Revert "gnu: guix: Update to 1.1.0-11.559491e."
This reverts commit ed8583d162 because of some
test failures.
2020-06-17 12:25:46 +02:00
nikita a3a8b88620
gnu: gnurl: Update to 7.70.0.
* gnu/packages/gnunet.scm (gnurl): Update to 7.70.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-17 12:06:33 +02:00
Ludovic Courtès c941b3128b
gnu: Add guvcview.
* gnu/packages/video.scm (guvcview): New variable.
2020-06-17 12:06:33 +02:00
Nicolas Goaziou ce84582b51
gnu: Add frozen-bubble.
* gnu/packages/games.scm (frozen-bubble): New variable.
2020-06-17 11:56:34 +02:00
Nicolas Goaziou eae6dd6f11
gnu: Add perl-sdl.
* gnu/packages/perl.scm (perl-sdl): New variable.
2020-06-17 11:56:34 +02:00
Nicolas Goaziou 16b1237938
gnu: Add perl-alien-sdl.
* gnu/packages/perl.scm (perl-alien-sdl): New variable.
2020-06-17 11:56:33 +02:00
Mathieu Othacehe ed8583d162
gnu: guix: Update to 1.1.0-11.559491e.
* gnu/packages/package-management.scm (guix): Update to 1.1.0-11.559491e.
2020-06-17 11:17:57 +02:00
Leo Famulari 559491ea5b
gnu: Transmission: Clean up the package definition.
* gnu/packages/bittorrent.scm (transmission)[license]: Correct the license
field.
[inputs]: Remove unused inputs inotify-tools, cyrus-sasl, and file.
2020-06-17 01:29:01 -04:00
Giacomo Leidi e7a7a483bc
gnu: papirus-icon-theme: Update to 20200602.
* gnu/packages/gnome-xyz.scm (papirus-icon-theme): Update to 20200602.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-16 23:09:47 +02:00
Giacomo Leidi 2eadf0917c
gnu: gnome-shell-extension-dash-to-panel: Update to 37.
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-dash-to-panel): Update to 37.
2020-06-16 23:07:44 +02:00
Jonathan Brielmaier d26186232e
gnu: Add chatty.
* gnu/packages/messaging.scm (chatty): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:53:47 +03:00
Jonathan Brielmaier 593ef98a28
gnu: Add purple-mm-sms.
* gnu/packages/messaging.scm (purple-mm-sms): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:36:37 +03:00
Jonathan Brielmaier 0faed3995b
gnu: Add feedbackd.
* gnu/packages/gnome.scm (feedbackd): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:30:03 +03:00
Tanguy Le Carrour f1adcfd37a
gnu: poetry: Update to 1.0.9.
* gnu/packages/python-xyz.scm (poetry): Update to 1.0.9.
[arguments] Adjust required versions of pyrsistent. Remove required
version of importlib-metadata.
[propagated-inputs] Add python-msgpack-transitional.
Remove python-importlib-metadata.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:21:40 +03:00
Tanguy Le Carrour 8d5c55b2e8
gnu: python-memcached: Add patch to fix syntax warnings.
* gnu/packages/patches/python-memcached-syntax-warnings.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-xyz.scm (python-memcached)[source]: Add it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 23:18:26 +03:00
Efraim Flashner daca70770a
gnu: guile-chickadee: Supress guile warnings.
* gnu/packages/game-development.scm (guile-chickadee)[arguments]: Add
make-flag to not autocompile guile files.
2020-06-16 23:05:43 +03:00
Efraim Flashner fb42a763e8
gnu: guile-sdl2: Remove unused configure-flags.
* gnu/packages/sdl.scm (guile-sdl2)[arguments]: Remove configure-flags.
2020-06-16 23:02:48 +03:00
Danny O'Brien 70fb07b520
gnu: guile-chickadee: Update to 0.5.0.
* gnu/packages/game-development.scm (guile-chickadee): Update to 0.5.0.
[inputs]: Add libvorbis, mpg123, openal.
(guile3.0-chickadee)[inputs]: Same.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 22:58:36 +03:00
Danny O'Brien 75990dcc57
gnu: guile-sdl2: Update to 0.5.0.
* gnu/packages/sdl.scm (guile-sdl2): Update to 0.5.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-06-16 22:58:27 +03:00
Michael Rohleder b3e52889c5
gnu: emacs-deadgrep: Update to 0.10.
* gnu/packages/emacs-xyz.scm (emacs-deadgrep): Update to 0.10.
[inputs]: change into...
[propagated-inputs]: ... this.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-06-16 21:35:29 +02:00
Nicolas Goaziou 503737624c
gnu: emacs-emms: Update to 5.42.
* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 5.42.
[source]: Use GNU ELPA repository.
[arguments]: Remove unnecessary phases.
2020-06-16 21:17:40 +02:00
Christopher Lemmer Webber 7fc273fe3f
gnu: crawl: Update to 0.25.0.
* gnu/packages/games.scm (crawl): Update to 0.25.0.
2020-06-16 15:04:49 -04:00
Ricardo Wurmus 7146c8c75d
gnu: python-ipython: Use python-prompt-toolkit-2.
This prevents conflicting variants of python-prompt-toolkit from being
installed, which prevented jupyter from being installed.

* gnu/packages/python-xyz.scm (python-ipython)[propagated-inputs]: Replace
python-prompt-toolkit with python-prompt-toolkit-2.
(python-widgetsnbextension)[propagated-inputs]: Do not use
prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel.
(python-ipywidgets)[propagated-inputs]: Do not use
prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython.
(python-jupyter-console)[propagated-inputs]: Do not use
prompt-toolkit-2-instead-of-prompt-toolkit on python-ipykernel.
(prompt-toolkit-2-instead-of-prompt-toolkit): Remove variable.
* gnu/packages/machine-learning.scm (python-iml)[propagated-inputs]: Do not
use prompt-toolkit-2-instead-of-prompt-toolkit on python-ipython.
2020-06-16 19:33:11 +02:00
Mathieu Othacehe 4febc38d9f
installer: final: Remove restart-service procedure.
* gnu/installer/final.scm (umount-cow-store): Remove "restart-service" that is
now provided by (gnu services herd).
2020-06-16 16:33:55 +02:00
Mathieu Othacehe e23ec7144c
gnu: libmateweather: Fix tests.
Apply the following upstream fix:
ea13e06563.

* gnu/packages/mate.scm (libmateweather)[source]: Fix tests by renaming
America/Godthab timezone to America/Nuuk.
2020-06-16 16:33:55 +02:00
Tobias Geerinckx-Rice b6329d026b
gnu: nix: Look for configuration in /etc.
Fixes <http://issues.guix.gnu.org/41704>.

* gnu/packages/package-management.scm (nix)[arguments]: Add
‘--sysconfdir=/etc’ configure flag and override it during installation.

Requested-and-tested-by: Peng Mei Yu <pengmeiyu@riseup.net>
2020-06-16 13:35:56 +02:00
Ricardo Wurmus 5f7b17a6e1
gnu: emacs-god-mode: Update to 2.17.0.
* gnu/packages/emacs-xyz.scm (emacs-god-mode): Update to 2.17.0.
2020-06-16 12:50:44 +02:00
Pierre Neidhardt 52adfeaed4
gnu: bsnes: Remove unnecessary inputs.
* gnu/packages/emulators.scm (bsnes)[inputs]: Remove gt+-2 and libx11.
2020-06-16 12:15:10 +02:00
Efraim Flashner 88ff06415c
gnu: Add rust-nom-5.
* gnu/packages/crates-io.scm (rust-nom-5): New variable.
(rust-nom-4.2): Inherit from rust-nom-5.
2020-06-16 12:49:05 +03:00
Efraim Flashner 16dcf12736
gnu: Add rust-lexical-core-0.7.
* gnu/packages/crates-io.scm (rust-lexical-core-0.7): New variable.
(rust-lexical-core-0.4): Inherit from rust-lexical-core-0.7.
2020-06-16 12:49:05 +03:00
Efraim Flashner 6675cd8c24
gnu: Add rust-static-assertions-1.
* gnu/packages/crates-io.scm (rust-static-assertions-1): New variable.
(rust-static-assertions-0.3): Inherit from rust-static-assertions-1.
2020-06-16 12:49:05 +03:00
Pierre Neidhardt 391aff1f68
gnu: Add bsnes.
* gnu/packages/emulators.scm (bsnes): New variable.
2020-06-16 10:56:35 +02:00
Ricardo Wurmus 000c7a0f70
gnu: r-xgboost: Update to 1.1.1.1.
* gnu/packages/cran.scm (r-xgboost): Update to 1.1.1.1.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus 6afe39829d
gnu: r-genenet: Update to 1.2.15.
* gnu/packages/cran.scm (r-genenet): Update to 1.2.15.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus e766bd1f13
gnu: r-performance: Update to 0.4.7.
* gnu/packages/cran.scm (r-performance): Update to 0.4.7.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus ead67125a8
gnu: r-abn: Update to 2.2.1.
* gnu/packages/cran.scm (r-abn): Update to 2.2.1.
[propagated-inputs]: Add r-boot, r-brglm, r-entropy, and r-moments.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus 389a357a72
gnu: r-vioplot: Update to 0.3.5.
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.5.
[native-inputs]: Add r-knitr.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus e89bc53e76
gnu: r-circlize: Update to 0.4.10.
* gnu/packages/cran.scm (r-circlize): Update to 0.4.10.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus b1a7a3bb78
gnu: Add r-entropy.
* gnu/packages/cran.scm (r-entropy): New variable.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus aee8cc0a0d
gnu: Add r-brglm.
* gnu/packages/cran.scm (r-brglm): New variable.
2020-06-16 09:33:53 +02:00
Ricardo Wurmus 6a933e9a8b
gnu: Add r-profilemodel.
* gnu/packages/cran.scm (r-profilemodel): New variable.
2020-06-16 09:33:53 +02:00
Maxim Cournoyer fb8542ed5c
gnu: emacs-yasnippet: Clean-up package definition.
An old snippet was causing the build to fail when using Emacs 27.

* gnu/packages/emacs-xyz.scm (emacs-yasnippet)[source]: Use git-file-name, and
remove obsolete snippet.
[phases]{home}: New phase.  This allows the rebindings test to pass.
{make-tests-writable, delete-rebinding-test}: Remove phases.
[description]: Re-indent.
2020-06-16 00:18:09 -04:00
Tobias Geerinckx-Rice 4df47410cf
gnu: volk: Improve description mark-up.
* gnu/packages/engineering.scm (volk)[description]: Substitute
@acronym for the less appropriate @code.
2020-06-16 05:15:47 +02:00
Tobias Geerinckx-Rice 5ed89cac64
gnu: volk: Fix typo in description.
* gnu/packages/engineering.scm (volk)[description]: Fix typo.
2020-06-16 05:15:47 +02:00
Tobias Geerinckx-Rice 40f986db30
gnu: inxi-minimal: Update to 3.1.03-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.1.03-1.
2020-06-16 05:15:47 +02:00
Tobias Geerinckx-Rice 0f99da2b39
gnu: tup: Update to 0.7.9.
* gnu/packages/build-tools.scm (tup): Update to 0.7.9.
2020-06-16 05:15:47 +02:00