f815519759
gnu: skymaker: Fix indentation.
...
* gnu/packages/astronomy.scm (skymaker): Fix indentation.
Change-Id: I2eeecb451d3da7004794ba55f687a2630ef20bcd
2024-07-30 10:30:45 +01:00
234bcc8fd6
gnu: skymaker: Update to 3.10.5.
...
* gnu/packages/astronomy.scm (skymaker): Update to 3.10.5.
Change-Id: Ib66f35834bdf3d6ce7d1b6924415a3e49b3ae7f9
2024-07-30 10:30:45 +01:00
b5de40f04b
gnu: cfitsio: Update to 4.4.1.
...
* gnu/packages/astronomy.scm (cfitsio): Update to 4.4.1.
Change-Id: Ia589fb141192b59ee5e422a8106da89dff931e85
2024-07-30 10:30:45 +01:00
b5c33f99e3
gnu: Add python-pytest-8.
...
* gnu/packages/check.scm (python-pytest-8): New variable.
Change-Id: Ie584a48a2749cc7b196e373fe4e6e08f47165620
2024-07-30 10:30:45 +01:00
99b292a653
gnu: Add python-pluggy-next.
...
* gnu/packages/python-build.scm (python-pluggy-next): New variable.
Change-Id: If3ec3f930a799df9602db71112a6c6a5272b524c
2024-07-30 10:30:38 +01:00
4e92ed625f
gnu: bwa,bwa-pssm: Improve package style.
...
* gnu/packages/bioinformatics.scm (bwa)[arguments]: Use G-expression.
(bwa-pssm)[arguments]: Use G-expression.
Change-Id: I63dd0f13f337fbf84967f1ef1b6332ce3391ae97
2024-07-30 15:57:44 +08:00
18a69ddbf3
gnu: bwa: Fix cross-compiling.
...
* gnu/packages/bioinformatics.scm (bwa)[arguments]<#:make-flags>: Use
CC-FOR-TARGET.
Change-Id: I63dd0f13f337fbf84967f1ef1b6332ce3391ae97
2024-07-30 15:53:58 +08:00
471c4322df
gnu: bwa: Update to 0.7.18.
...
* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.18.
[source]: Switch to git-fetch.
[supported-systems]: Add aarch64-linux.
Change-Id: I63dd0f13f337fbf84967f1ef1b6332ce3391ae97
2024-07-30 15:44:36 +08:00
6efd02551d
gnu: skopeo: Update to 1.16.0.
...
* gnu/packages/virtualization.scm (skopeo): Update to 1.16.0.
[arguments]<#:phases>: Delete the `cc-to-gcc' phase.
Change-Id: I35a91219c3c920f37f496df6322ae1e40fa1ccc3
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-07-30 14:50:14 +08:00
3e4e1aa99b
gnu: ddcci-driver-linux: Update to 0.4.5.
...
* gnu/packages/linux.scm (ddcci-driver-linux): Update to 0.4.5.
[source]: Remove already upstream patch.
* gnu/packages/patches/ddcci-driver-linux-6.8.patch: Remove it.
* gnu/local.mk: Unregister it.
Change-Id: I1d4920ec84ea2a67554560181e99e9e2d535af2a
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-07-30 14:40:40 +08:00
be46349a4e
gnu: yambar-wayland: Enable pulseaudio module.
...
* gnu/packages/wm.scm (yambar-wayland)[inputs]: Add pulseaudio.
Change-Id: I1d4933ef10557ed06b9f00f21b466a4ea19be910
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-07-30 14:40:40 +08:00
f2d5e04c3a
gnu: weechat-wee-slack: Update to 2.10.2.
...
* gnu/packages/messaging.scm (weechat-wee-slack): Update to 2.10.2.
Change-Id: I2a5f0d4989fb9841016fcf8c3ab4411d837220c6
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-07-30 14:40:40 +08:00
a22098c943
gnu: Add drm-info.
...
* gnu/packages/freedesktop.scm (drm-info): New variable.
Change-Id: I02a0bdcbb49644de9884038cd36bf6d8482f84ae
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-07-30 14:40:40 +08:00
c80e8aed74
gnu: buildah: Update to 1.37.0.
...
* gnu/packages/containers.scm (buildah): Update to 1.37.0.
Change-Id: I2717b8ebbd63c40938c90b2821c199d2025b849c
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
2024-07-30 14:40:40 +08:00
1db794104f
gnu: ftxui: Update to 5.0.0.
...
* gnu/packages/cpp.scm (ftxui): Update to 5.0.0.
Change-Id: I5a1d0170c9d44426fb76eb00296af644fa7d8c16
2024-07-30 14:40:36 +08:00
4f68605d56
gnu: linux-libre 6.1: Update to 6.1.101.
...
* gnu/packages/linux.scm (linux-libre-6.1-version): Update to 6.1.101.
(linux-libre-6.1-pristine-source): Update hash.
Change-Id: Ia489adca9b27b469e777726c20ccb373c6d6aab4
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-07-29 23:20:06 -04:00
9a3c1b8118
gnu: linux-libre 6.6: Update to 6.6.42.
...
* gnu/packages/linux.scm (linux-libre-6.6-version): Update to 6.6.42.
(linux-libre-6.6-pristine-source): Update hash.
Change-Id: I898fab9f04f71f6cdc759315f7fd4e5d28e8d710
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-07-29 23:20:05 -04:00
1e407ed2ba
gnu: linux-libre 6.9: Update to 6.9.11.
...
* gnu/packages/linux.scm (linux-libre-6.9-version): Update to 6.9.11.
(linux-libre-6.9-pristine-source): Update hash.
Change-Id: I1a400cd4abecca2e1c6344353ede1e7b5be75d7b
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-07-29 23:20:05 -04:00
93e19067b4
gnu: Add linux-libre 6.10.1.
...
* gnu/packages/linux.scm (linux-libre-6.10-version, linux-libre-6.10-gnu-revision,
deblob-scripts-6.10, linux-libre-6.10-pristine-source, linux-libre-6.10-source,
linux-libre-headers-6.10, linux-libre-6.10): New variables.
* gnu/packages/aux-files/linux-libre/6.10-arm.conf,
gnu/packages/aux-files/linux-libre/6.10-arm64.conf,
gnu/packages/aux-files/linux-libre/6.10-i686.conf,
gnu/packages/aux-files/linux-libre/6.10-x86.conf: New files.
* Makefile.am (AUX_FILES): Add them.
Change-Id: If62ec2e8029ebd7531d3b4ba9a666c0b5f3b0f4c
Signed-off-by: Leo Famulari <leo@famulari.name>
2024-07-29 23:20:04 -04:00
859d1245b4
gnu: dwarves: Update to 1.27.
...
* gnu/packages/linux.scm (dwarves): Update to 1.27.
Change-Id: Id986fdd240a6619544ff6be93cce00afd9fc31bd
2024-07-29 23:20:04 -04:00
f093ea3f2e
gnu: Add python-motulator.
...
* gnu/packages/engineering.scm (python-motulator): New variable.
Change-Id: I96af42be634a4ceaffe011d81177d42d48616eb2
Signed-off-by: jgart <jgart@dismail.de>
2024-07-29 13:48:50 -05:00
fdc6274de5
gnu: python-celery: Update to 5.4.0.
...
* gnu/packages/python-xyz.scm (python-celery): Update to 5.4.0.
[native-inputs]: Add python-google-cloud-storage.
Change-Id: I9ddb215661491deaab0d8dc31207cd3043637d21
2024-07-28 11:00:53 -03:00
a268e94bf2
gnu: python-arviz: Update to 0.19.0.
...
* gnu/packages/statistics.scm (python-arviz): Update to 0.19.0.
Change-Id: Ia42eb00424e77e47e315842313d0ea3759102eab
2024-07-28 11:00:53 -03:00
731241c367
gnu: xonsh: Update to 0.18.2.
...
* gnu/packages/shells.scm (xonsh): Update to 0.18.2.
[source](snippet): Adjust substitution filenames and delete the vendored ply
package.
[arguments]<#:test-flags>: Skip new failing test.
Change-Id: I9a975c9ab200075cbbfe6daf1892c33cb5c3a624
2024-07-28 11:00:37 -03:00
ed882ad668
gnu: python-pyro-ppl: Simplify inputs.
...
* gnu/packages/machine-learning.scm (python-pyro-ppl)[native-inputs]: Remove
ninja, jupyter, python-black, python-flake8, python-graphviz, python-isort,
python-lap, python-matplotlib, python-mypy, python-nbformat, python-nbsphinx,
python-nbstripout, python-nbval, python-pandas, python-pillow,
python-pypandoc, python-pytest, python-pytest-cov, python-pytest-xdist,
python-scikit-learn, python-scipy, python-seaborn, python-sphinx,
python-sphinx-rtd-theme, python-torchvision, python-visdom, python-wget,
python-yapf.
Change-Id: Id7a413fdbdd8a808dffb4804c8a7f04bf2c31bbc
2024-07-28 10:59:48 -03:00
22e8880ae2
gnu: python-pyro-ppl: Update to 1.9.1.
...
* gnu/packages/machine-learning.scm (python-pyro-ppl): Update to 1.9.1.
[arguments]: Remove #:test-flags and skip all tests in #:tests?.
Change-Id: If90024d904bb830df2868423a5947ecaf45b46fc
2024-07-28 10:59:04 -03:00
2b40c6985a
gnu: python-botorch: Update to 0.11.3.
...
* gnu/packages/machine-learning.scm (python-botorch): Update to 0.11.3.
[arguments]<#:test-flags>: Skip a failing test.
<#:phases>: Delete the 'lo-version phase.
Change-Id: I110631da8c5e442eaf00daa1b42caff29d61b36b
2024-07-28 10:49:17 -03:00
92993da382
gnu: ngspice: Enable tests.
...
* gnu/packages/engineering.scm (ngspice)[arguments]: Pass #t to #:tests?.
[native-inputs]: Add perl.
Change-Id: I209999b5685865e9c7a17106da8ffab9fad1367b
2024-07-28 10:49:17 -03:00
0c3fd900cf
gnu: libngspice, ngspice: Improve package style.
...
* gnu/packages/engineering.scm (libngspice, ngspice): Reformat packages using
'guix style'.
[arguments]: Use G-Expressions.
Change-Id: I59efa6a78797c2dc2a960ce0be74b2a7381d6d4c
2024-07-28 10:49:17 -03:00
bd03b42d91
gnu: libngspice, ngspice: Update to 43.
...
* gnu/packages/engineering.scm (libngspice, ngspice): Update to 43.
(libngspice)[arguments]<#:phases>: Delete the 'patch-timestamps and
'delete-program-manuals phases.
(ngspice)[arguments]<#:phases>: Delete the 'delete-include-files phase.
Remove the line that deletes the now deleted 'delete-program-manuals phase.
These substitutions do not apply anymore.
Change-Id: Ie7ec8dd0998df38828e2e0af226158922e34ea09
2024-07-28 10:49:17 -03:00
b556eee0f1
gnu: Add emacs-org-remark.
...
* gnu/packages/emacs-xyz.scm (emacs-org-remark): New variable.
Change-Id: If7c5cca824f9b9a0c3f7fb0d39d0f73f0fe52460
2024-07-28 10:49:15 -03:00
46a64c7fdd
gnu: klee-uclibc: Only build on x86_64 Linux.
...
* gnu/packages/check.scm (klee-uclibc): Add supported-systems.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-07-27 17:53:02 +02:00
ed726598fc
gnu: klee: Only build on x86_64 Linux.
...
* gnu/packages/check.scm (klee): Add supported-systems.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-07-27 17:53:02 +02:00
842517477b
gnu: klee: Only strip bin directory.
...
This avoid several warnings to be emitted by strip(1) when attempting
to strip .bca (i.e. LLVM bitcode) files shipped in /lib/klee/runtime/.
* gnu/packages/check.scm (klee): Set #:strip-directories.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-07-27 17:53:02 +02:00
187b6df6f1
gnu: klee: Enable the test suite.
...
* gnu/packages/check.scm (klee): Enable all tests.
[arguments]: Patch lit configuration and set #:test-target.
<#:configure-flags?>: Enable system and unit tests, configure gtest.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-07-27 17:53:02 +02:00
661d5eeb8e
gnu: klee: Wrap klee-stats for Python dependencies.
...
* gnu/packages/check.scm (klee): Wrap klee-stats.
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2024-07-27 17:53:01 +02:00
0acc1c68d6
gnu: lager: Update to 0.1.1.
...
* gnu/packages/cpp.scm (lager): Update to 0.1.1.
Change-Id: Ied19cc6d5371cee9d97aa4dfb21a78f6d1582f10
2024-07-27 11:25:23 +02:00
e165382c16
gnu: zug: Update to 0.1.1.
...
* gnu/packages/cpp.scm (zug): Update to 0.1.1.
Change-Id: I0e86256f986bab5d97081ddd9ef85375643a6997
2024-07-27 11:25:23 +02:00
009fb462ef
gnu: Add python-clingox.
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* gnu/packages/potassco.scm (python-clingox): New variable.
2024-07-27 11:25:23 +02:00
d3e2b68e38
gnu: Add python-asprin.
...
* gnu/packages/potassco.scm (python-asprin): New variable.
2024-07-27 11:25:23 +02:00
c6ff1d6ff7
gnu: trealla: Update to 2.55.10.
...
* gnu/packages/prolog.scm (trealla): Update to 2.55.10.
Change-Id: I2545a6d3ac5bf740c4ceb9e8bcd33d60707e67b9
2024-07-26 18:28:07 -05:00
a4a66187e6
gnu: trealla: Update to 2.55.9.
...
* gnu/packages/prolog.scm (trealla): Update to 2.55.9.
Change-Id: I29b5500da8e6acc382397662d4c44cf1c6e1fdf9
2024-07-26 18:28:06 -05:00
4f201dfa3f
gnu: trealla: Update to 2.55.8.
...
* gnu/packages/prolog.scm (trealla): Update to 2.55.8.
Change-Id: Ia938a79d35948d56a97a8933b312916f264c31b7
2024-07-26 18:28:06 -05:00
862a9b5b25
gnu: wfetch: Give the executable the expected name.
...
Fixes a problem reported by bdju on #guix:
https://logs.guix.gnu.org/guix/2024-07-26.log#221323
* gnu/packages/python-xyz.scm (wfetch)[arguments]: Rename the executable in the
custom 'install' phase.
Change-Id: I0e8dd41195ef716618b9dd5fd196f392a546272a
2024-07-26 16:34:22 -04:00
72e586fcae
gnu: gtk: Fix build on aarch64.
...
* gnu/packages/gtk.scm (gtk)[arguments]<#:test-options>: Rename failing
test suite to match upstream change on aarch64-linux.
Change-Id: Ibdf03a94e71f72283a093cba6d5a328004defa5c
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2024-07-26 19:21:34 +02:00
9db34c41ac
build-system/meson: #:test-options can be a gexp.
...
* guix/build-system/meson.scm (meson-build, meson-cross-build): Accept
gexps for #:test-options.
Change-Id: I9cfec616f067a5c9928f65892e370f90f23f4352
2024-07-26 19:21:33 +02:00
4bc49e2185
services: agate: Update options for compatibility with the current Agate version.
...
* gnu/services/web.scm (<agate-configuration>)[certs]: Add.
[cert]: Remove.
[key]: Remove.
[hostname]: Change from string to list.
[silent?]: Remove.
[only-tls13?]: Add.
[central-conf?]: Add.
[ed25519?]: Add.
[skip-port-check?]: Add.
(agate-shepherd-service): Change handling of addr and hostname, add new
options handling.
* doc/guix.texi (Web Services): Update.
Change-Id: Ifb4968d704627344913bb69f20636d710a4fe738
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-07-26 18:55:07 +02:00
2cbdec8bcd
file-systems: Allow specifying CIFS credentials in a file.
...
As files in the store and /etc/fstab are world readable, specifying the
password in the file-system record is suboptimal. To mitigate this,
`mount.cifs' supports reading `username', `password' and `domain' options from
a file named by the `credentials' or `cred' option.
* gnu/build/file-systems.scm (mount-file-system): Read mount options from the
file specified via the `credentials' or `cred' option if specified.
Change-Id: I786c5da373fc26d45fe7a876c56a8c4854d18532
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-07-26 18:50:53 +02:00
b631640f3b
home: Set 700 permissions on .gnupg with home-gpg-agent-service
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* gnu/home/services/gnupg.scm (gpg-agent-activation): New variable.
(home-gpg-agent-service-type) [extensions]: Extend
home-activation-service-type.
Change-Id: If3365c6cade2b03ee53a466ce1d63a5cdf654d6c
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-07-26 18:22:04 +02:00
31fe177a97
gnu: petsc: Build reproducibly.
...
* gnu/packages/maths.scm (petsc)[arguments]: In ‘configure’ phase, add
‘sorted’ call in ‘gmakegen.py’.
In ‘clean-local-references’, remove substitution of “Libraries compiled
on”, which is unnecessary since PETSc 3.9
(<a970bd7489
2024-07-26 18:18:12 +02:00
Sharlatan Hellseher
Zheng Junjie
Spencer King
Tomas Volf
Ashish SHUKLA
Ashish SHUKLA via Guix-patches via
Wilko Meyer
Leo Famulari
Vinicius Monego
Sören Tempel
Liliana Marie Prikler
jgart
Timotej Lazar
Ludovic Courtès
Rodion Goritskov
vicvbcun
Richard Sent
Lars Bilke