b1b605fddb
gnu: r-broom: Update to 0.7.9.
...
* gnu/packages/cran.scm (r-broom): Update to 0.7.9.
2021-07-29 17:11:08 +02:00
fe6ad60e36
gnu: r-rpostgresql: Update to 0.7.
...
* gnu/packages/cran.scm (r-rpostgresql): Update to 0.7.
2021-07-29 17:11:08 +02:00
74abd1ebe9
gnu: r-arrow: Update to 5.0.0.
...
* gnu/packages/cran.scm (r-arrow): Update to 5.0.0.
2021-07-29 17:11:08 +02:00
ef61998524
gnu: apache-arrow: Update to 5.0.0.
...
* gnu/packages/databases.scm (apache-arrow): Update to 5.0.0.
2021-07-29 17:11:08 +02:00
bc55f3091b
gnu: util-linux: Explicitly depend on 'file'.
...
...instead of using the variant that happens to be in %FINAL-INPUTS.
* gnu/packages/linux.scm (util-linux)[inputs]: Add FILE. While at it, remove
labels.
[native-inputs]: Remove labels.
2021-07-29 14:10:13 +02:00
cdd3141f19
gnu: util-linux: Remove cross-compilation workaround.
...
* gnu/packages/linux.scm (util-linux)[arguments]: Look for /etc/services in
both NATIVE-INPUTS and INPUTS, instead of by input label. Remove unused variable.
[inputs]: When cross-compiling, don't add NET-BASE.
2021-07-29 14:10:13 +02:00
ec0a244417
gnu: util-linux: Update to 2.37.1.
...
This fixes an infinite loop in 'mkswap'; see
<https://bugzilla.redhat.com/show_bug.cgi?id=1971877 >.
* gnu/packages/linux.scm (util-linux): Update to 2.37.1.
2021-07-29 14:10:13 +02:00
8437710bbf
gnu: r-with-tests: Add missing TeX Live packages.
...
* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Add
texlive-grfext and texlive-latex-l3backend to the texlive union.
2021-07-29 13:51:01 +02:00
ed84f6f869
gnu: Add texlive-grfext.
...
* gnu/packages/tex.scm (texlive-grfext): New variable.
2021-07-29 13:51:01 +02:00
b95fb85f59
gnu: vim-guix-vim: Update to 0.3.0.
...
* gnu/packages/vim.scm (vim-guix-vim): Update to 0.3.0.
[source]: Update source uri.
2021-07-29 14:46:41 +03:00
4707ab2fc0
gnu: julia-weakrefstrings: Update to 1.1.0.
...
* gnu/packages/julia-xyz.scm (julia-weakrefstrings): Update to 1.1.0.
2021-07-29 14:43:43 +03:00
6bf32d1314
gnu: julia-typedtables: Update to 1.4.0.
...
* gnu/packages/julia-xyz.scm (julia-typedtables): Update to 1.4.0.
2021-07-29 14:43:43 +03:00
f5ec4cd9ac
gnu: julia-staticarrays: Update to 1.2.9.
...
* gnu/packages/julia-xyz.scm (julia-staticarrays): Update to 1.2.9.
2021-07-29 14:43:43 +03:00
ace03e017c
gnu: julia-static: Update to 0.3.0.
...
* gnu/packages/julia-xyz.scm (julia-static): Update to 0.3.0.
2021-07-29 14:43:43 +03:00
bf796e1b8e
gnu: julia-sortingalgorithms: Update to 1.0.1.
...
* gnu/packages/julia-xyz.scm (julia-sortingalgorithms): Update to 1.0.1.
2021-07-29 14:43:42 +03:00
b9264f2870
gnu: julia-simpletraits: Update to 0.9.4.
...
* gnu/packages/julia-xyz.scm (julia-simpletraits): Update to 0.9.4.
2021-07-29 14:43:42 +03:00
831ce9b94e
gnu: julia-recipespipeline: Update to 0.3.4.
...
* gnu/packages/julia-xyz.scm (julia-recipespipeline): Update to 0.3.4.
2021-07-29 14:43:42 +03:00
230d77d958
gnu: julia-plotutils: Update to 1.0.11.
...
* gnu/packages/julia-xyz.scm (julia-plotutils): Update to 1.0.11.
2021-07-29 14:43:42 +03:00
c2305209c2
gnu: julia-offsetarrays: Update to 1.10.3.
...
* gnu/packages/julia-xyz.scm (julia-offsetarrays): Update to 1.10.3.
2021-07-29 14:43:42 +03:00
f70db25982
gnu: julia-mutablearithmetics: Update to 0.2.20.
...
* gnu/packages/julia-xyz.scm (julia-mutablearithmetics): Update to 0.2.20.
2021-07-29 14:43:42 +03:00
3127f3731a
gnu: julia-matrixfactorizations: Update to 0.8.4.
...
* gnu/packages/julia-xyz.scm (julia-matrixfactorizations): Update to 0.8.4.
2021-07-29 14:43:42 +03:00
5f432ed5a7
gnu: julia-lazyarrays: Update to 0.21.11.
...
* gnu/packages/julia-xyz.scm (julia-lazyarrays): Update to 0.21.11.
2021-07-29 14:43:41 +03:00
6087d0dbd6
gnu: julia-json3: Update to 1.9.0.
...
* gnu/packages/julia-xyz.scm (julia-json3): Update to 1.9.0.
2021-07-29 14:43:41 +03:00
4a69ab16ec
gnu: julia-irtools: Update to 0.4.3.
...
* gnu/packages/julia-xyz.scm (julia-irtools): Update to 0.4.3.
2021-07-29 14:43:41 +03:00
fa86b01662
gnu: julia-imagecore: Update to 0.9.1.
...
* gnu/packages/julia-xyz.scm (julia-imagecore): Update to 0.9.1.
2021-07-29 14:43:41 +03:00
a9292ceeca
gnu: julia-http: Update to 0.9.12.
...
* gnu/packages/julia-xyz.scm (julia-http): Update to 0.9.12.
2021-07-29 14:43:41 +03:00
92929c2288
gnu: julia-genericschur: Update to 0.5.1.
...
* gnu/packages/julia-xyz.scm (julia-genericschur): Update to 0.5.1.
2021-07-29 14:43:41 +03:00
f7d79b9671
gnu: julia-finitediff: Update to 2.8.1.
...
* gnu/packages/julia-xyz.scm (julia-finitediff): Update to 2.8.1.
2021-07-29 14:43:40 +03:00
ebd7ca3f4b
gnu: julia-fillarrays: Update to 0.12.1.
...
* gnu/packages/julia-xyz.scm (julia-fillarrays): Update to 0.12.1.
2021-07-29 14:43:40 +03:00
231387c3bb
gnu: julia-exprtools: Update to 0.1.6.
...
* gnu/packages/julia-xyz.scm (julia-exprtools): Update to 0.1.6.
2021-07-29 14:43:40 +03:00
23dbed6f76
gnu: julia-dictionaries: Update to 0.3.10.
...
* gnu/packages/julia-xyz.scm (julia-dictionaries): Update to 0.3.10.
2021-07-29 14:43:40 +03:00
e076ed6eee
gnu: julia-dataapi: Update to 1.7.0.
...
* gnu/packages/julia-xyz.scm (julia-dataapi): Update to 1.7.0.
2021-07-29 14:43:40 +03:00
57e5c907d9
gnu: julia-constructionbase: Update to 1.3.0.
...
* gnu/packages/julia-xyz.scm (julia-constructionbase): Update to 1.3.0.
2021-07-29 14:43:40 +03:00
9cd7145bcd
gnu: julia-compat: Update to 3.32.0.
...
* gnu/packages/julia-xyz.scm (julia-compat): Update to 3.32.0.
2021-07-29 14:43:40 +03:00
ebe8aa846e
gnu: julia-colorschemes: Update to 3.13.0.
...
* gnu/packages/julia-xyz.scm (julia-colorschemes): Update to 3.13.0.
2021-07-29 14:43:39 +03:00
b5df917439
gnu: julia-blockbandedmatrices: Update to 0.10.7.
...
* gnu/packages/julia-xyz.scm (julia-blockbandedmatrices): Update to 0.10.7.
2021-07-29 14:43:39 +03:00
f0398a070b
gnu: julia-blockarrays: Update to 0.16.3.
...
* gnu/packages/julia-xyz.scm (julia-blockarrays): Update to 0.16.3.
2021-07-29 14:43:39 +03:00
ad8c40407c
gnu: julia-benchmarktools: Update to 1.1.1.
...
* gnu/packages/julia-xyz.scm (julia-benchmarktools): Update to 1.1.1.
2021-07-29 14:43:39 +03:00
5d45f7b1d5
gnu: julia-bandedmatrices: Update to 0.16.10.
...
* gnu/packages/julia-xyz.scm (julia-bandedmatrices): Update to 0.16.10.
2021-07-29 14:43:39 +03:00
af3699492e
gnu: julia-axisarrays: Update to 0.4.4.
...
* gnu/packages/julia-xyz.scm (julia-axisarrays): Update to 0.4.4.
2021-07-29 14:43:39 +03:00
01546260b8
gnu: julia-arraylayouts: Update to 0.7.3.
...
* gnu/packages/julia-xyz.scm (julia-arraylayouts): Update to 0.7.3.
2021-07-29 14:43:38 +03:00
7067111296
gnu: julia-arrayinterface: Update to 3.1.19.
...
* gnu/packages/julia-xyz.scm (julia-arrayinterface): Update to 3.1.19.
2021-07-29 14:43:38 +03:00
bfd92c357a
gnu: julia-interpolations: Update to 0.13.3.
...
* gnu/packages/julia-xyz.scm (julia-interpolations): Update to 0.13.3.
[propagated-inputs]: Add julia-requires.
[native-inputs]: Add julia-zygote.
2021-07-29 14:43:38 +03:00
f93a9835f3
gnu: julia-recursivearraytools: Update to 2.16.1.
...
* gnu/packages/julia-xyz.scm (julia-recursivearraytools): Update to 2.16.1.
[propagated-inputs]: Add julia-chainrulescore.
2021-07-29 14:43:38 +03:00
6752fc153a
gnu: julia-imageinterminal: Udate to 0.4.7.
...
* gnu/packages/julia-xyz.scm (julia-imageinterminal): Update to 0.4.7.
[propagated-inputs]: Add julia-imagebase, julia-requires. Remove
julia-imagetransformations.
2021-07-29 14:43:38 +03:00
0f15f77464
gnu: julia-ellipsisnotation: Adjust test suite for julia-1.6.
...
* gnu/packages/julia-xyz.scm (julia-ellipsisnotation)[arguments]: Add
phase to skip outdated test.
2021-07-29 14:43:38 +03:00
8d787994e5
gnu: julia-zygote: Update to 0.6.17.
...
* gnu/packages/julia-xyz.scm (julia-zygote): Update to 0.6.17.
2021-07-29 14:43:38 +03:00
f6bc4657e1
gnu: julia-unitful: Update to 1.9.0.
...
* gnu/packages/julia-xyz.scm (julia-unitful): Update to 1.9.0.
2021-07-29 14:43:37 +03:00
9fe69d78d6
gnu: julia-tables: Update to 1.4.4.
...
* gnu/packages/julia-xyz.scm (julia-tables): Update to 1.4.4.
2021-07-29 14:43:37 +03:00
2d25b2f9b7
gnu: julia-staticarrays: Update to 1.2.8.
...
* gnu/packages/julia-xyz.scm (julia-staticarrays): Update to 1.2.8.
2021-07-29 14:43:37 +03:00
071f036625
gnu: julia-finitedifferences: Update to 0.12.17.
...
* gnu/packages/julia-xyz.scm (julia-finitedifferences): Update to 0.12.17.
2021-07-29 14:43:37 +03:00
e477487e00
gnu: julia-chainrulestestutils: Update to 1.0.0.
...
* gnu/packages/julia-xyz.scm (julia-chainrulestestutils): Update to 1.0.0.
2021-07-29 14:43:37 +03:00
038a7dd56b
gnu: julia-chainrulescore: Update to 1.0.2.
...
* gnu/packages/julia-xyz.scm (julia-chainrulescore): Update to 1.0.2.
2021-07-29 14:43:37 +03:00
4a79a39b1c
gnu: julia-chainrules: Update to 1.1.0.
...
* gnu/packages/julia-xyz.scm (julia-chainrules): Update to 1.1.0.
2021-07-29 14:43:31 +03:00
228763316a
gnu: julia-specialfunctions: Update to 1.6.0.
...
* gnu/packages/julia-xyz.scm (julia-specialfunctions): Update to 1.6.0.
[propagated-inputs]: Add julia-logexpfunctions.
2021-07-29 14:43:30 +03:00
226af89e58
gnu: julia-fuzzycompletions: Adjust test suite for julia-1.6.
...
* gnu/packages/julia-xyz.scm (julia-fuzzycompletions)[arguments]: Add
phase to skip failing test.
2021-07-29 14:43:30 +03:00
d09223edab
gnu: julia-rotations: Update to 1.0.2-1.b599102.
...
* gnu/packages/julia-xyz.scm (julia-rotations): Update to 1.0.2-1.b599102.
2021-07-29 14:43:30 +03:00
1cc36f5efe
gnu: julia-nnlib: Update to 0.7.25.
...
* gnu/packages/julia-xyz.scm (julia-nnlib): Update to 0.7.25.
[arguments]: Skip tests.
2021-07-29 14:43:30 +03:00
7975a64b6d
gnu: julia-tracker: Patch for julia-1.6.
...
* gnu/packages/julia-xyz.scm (julia-tracker)[source]: Add patch.
* gnu/packages/patches/julia-tracker-16-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2021-07-29 14:43:27 +03:00
74dad2c75a
gnu: python-pikepdf: Update to 2.16.1.
...
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.16.1.
2021-07-29 10:28:08 +02:00
01cc360cf5
gnu: emacs-csharp-mode: Update to 0.12.0.
...
* gnu/packages/emacs-xyz.scm (emacs-csharp-mode): Update to 0.12.0.
2021-07-29 10:26:31 +02:00
c56df3b946
gnu: python2-pygraphviz: Remove it.
...
* gnu/packages/graphviz.scm (python2-pygraphviz): Remove it.
2021-07-29 10:24:50 +02:00
3ef3f791f9
gnu: emacs-nswbuff: Update to 1.3.
...
* gnu/packages/emacs-xyz.scm (emacs-nswbuff): Update to 1.3.
2021-07-29 10:24:44 +02:00
370cb92eaa
gnu: python-pygraphviz: Update to 1.7.
...
* gnu/packages/graphviz.scm (python-pygraphviz): Update to 1.7.
[arguments]: Remove #:configure-flags that are no longer supported.
[inputs]: Use the latest graphviz package.
[native-inputs]: Add python-pytest.
2021-07-29 10:23:52 +02:00
e4e9037402
gnu: snap: Update to 6.9.0.
...
* gnu/packages/education.scm (snap): Update to 6.9.0.
2021-07-29 10:21:49 +02:00
87b409d7e9
gnu: mame: Update to 0.234.
...
* gnu/packages/emulators.scm (mame): Update to 0.234.
2021-07-29 10:14:29 +02:00
3a59d722c1
gnu: emacs-solaire-mode: Update to 2.0.2.
...
* gnu/packages/emacs-xyz.scm (emacs-solaire-mode): Update to 2.0.2.
2021-07-29 09:44:57 +02:00
79a99af640
gnu: emacs-org-fragtog: Update to 0.3.3.
...
* gnu/packages/emacs-xyz.scm (emacs-org-fragtog): Update to 0.3.3.
2021-07-29 09:44:11 +02:00
59dd6dfb91
gnu: Add emacs-nasm-mode.
...
* gnu/packages/emacs-xyz.scm (emacs-nasm-mode): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-29 09:40:08 +02:00
b4c86e6dbc
gnu: graphviz-2.38: Fix build failure.
...
* gnu/packages/graphviz.scm
(graphviz-2.38)[arguments]<#:phases>: Make this a G-exp.
Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2021-07-29 09:30:32 +02:00
7af47b876a
gnu: linux-libre 4.4: Update to 4.4.277.
...
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.277.
(linux-libre-4.4-pristine-source): Update hash.
2021-07-28 17:18:04 -04:00
7c31c37676
gnu: linux-libre 4.9: Update to 4.9.277.
...
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.277.
(linux-libre-4.9-pristine-source): Update hash.
2021-07-28 17:18:04 -04:00
f836b47eba
gnu: linux-libre 4.14: Update to 4.14.241.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.241.
(linux-libre-4.14-pristine-source): Update hash.
2021-07-28 17:18:04 -04:00
278fc1e85d
gnu: linux-libre 4.19: Update to 4.19.199.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.199.
(linux-libre-4.19-pristine-source): Update hash.
2021-07-28 17:18:03 -04:00
7400d3ebbe
gnu: linux-libre 5.4: Update to 5.4.136.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.136.
(linux-libre-5.4-pristine-source): Update hash.
2021-07-28 17:18:03 -04:00
a137816cc7
gnu: linux-libre 5.10: Update to 5.10.54.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.54.
(linux-libre-5.10-pristine-source): Update hash.
2021-07-28 17:18:03 -04:00
4f108e4e5c
gnu: linux-libre: Update to 5.13.6.
...
* gnu/packages/linux.scm (linux-libre-5.12-version, deblob-scripts-5.12
linux-libre-5.12-pristine-source, linux-libre-5.12-source,
linux-libre-headers-5.12, linux-libre-5.12): Remove variables.
(linux-libre-version, linux-libre-pristine-source, linux-libre-source,
linux-libre): Update to the 5.13 kernel series.
(linux-libre-with-bpf): Update to 5.13 kernel series.
* gnu/packages/aux-files/linux-libre/5.12-arm.conf,
gnu/packages/aux-files/linux-libre/5.12-arm64.conf,
gnu/packages/aux-files/linux-libre/5.12-i686.conf,
gnu/packages/aux-files/linux-libre/5.12-x86_64.conf: Delete files.
* Makefile.am (AUX_FILES): Remove them.
2021-07-28 17:18:02 -04:00
a32241fcda
gnu: r-catalyst: Update to 1.16.2.
...
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.2.
2021-07-28 22:26:56 +02:00
9d7eb480f8
gnu: r-mixomics: Update to 6.16.2.
...
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.2.
2021-07-28 22:26:56 +02:00
d0d3637c92
gnu: r-rsubread: Update to 2.6.4.
...
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.4.
2021-07-28 22:26:56 +02:00
8d9626dd7d
gnu: r-annotatr: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.18.1.
2021-07-28 22:26:56 +02:00
73fa220b43
gnu: r-motifbreakr: Update to 2.6.1.
...
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.6.1.
2021-07-28 22:26:55 +02:00
336b110f69
gnu: r-scone: Update to 1.16.1.
...
* gnu/packages/bioconductor.scm (r-scone): Update to 1.16.1.
2021-07-28 22:26:55 +02:00
fd0851ee97
gnu: r-chippeakanno: Update to 3.26.2.
...
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.2.
2021-07-28 22:26:55 +02:00
acc62073be
gnu: r-ensembldb: Update to 2.16.3.
...
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.3.
2021-07-28 22:26:55 +02:00
e2ca38e611
gnu: r-ranger: Update to 0.13.1.
...
* gnu/packages/statistics.scm (r-ranger): Update to 0.13.1.
2021-07-28 22:26:55 +02:00
8934c48d41
gnu: r-blob: Update to 1.2.2.
...
* gnu/packages/statistics.scm (r-blob): Update to 1.2.2.
2021-07-28 22:26:55 +02:00
a30bcf6600
gnu: r-rcpparmadillo: Update to 0.10.6.0.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.6.0.0.
2021-07-28 22:26:55 +02:00
92c837f426
gnu: r-readr: Update to 2.0.0.
...
* gnu/packages/statistics.scm (r-readr): Update to 2.0.0.
[propagated-inputs]: Remove r-bh; add r-tzdb and r-vroom.
2021-07-28 22:26:55 +02:00
8c7483196a
gnu: r-tibble: Update to 3.1.3.
...
* gnu/packages/statistics.scm (r-tibble): Update to 3.1.3.
2021-07-28 22:26:55 +02:00
ee2bae9385
gnu: r-pryr: Update to 0.1.5.
...
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.5.
[propagated-inputs]: Add r-lobstr and r-rcpp.
[native-inputs]: Remove r-rcpp.
2021-07-28 22:26:55 +02:00
5fb96b16a4
gnu: r-stringi: Update to 1.7.3.
...
* gnu/packages/statistics.scm (r-stringi): Update to 1.7.3.
2021-07-28 22:26:55 +02:00
b33be7b772
gnu: r-vroom: Update to 1.5.3.
...
* gnu/packages/cran.scm (r-vroom): Update to 1.5.3.
2021-07-28 22:26:55 +02:00
7f244ccacb
gnu: r-tzdb: Update to 0.1.2.
...
* gnu/packages/cran.scm (r-tzdb): Update to 0.1.2.
2021-07-28 22:26:55 +02:00
42085a60bf
gnu: r-readtext: Update to 0.81.
...
* gnu/packages/cran.scm (r-readtext): Update to 0.81.
2021-07-28 22:26:55 +02:00
36e993e302
gnu: r-mlr3misc: Update to 0.9.3.
...
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.9.3.
[propagated-inputs]: Add r-digest.
2021-07-28 22:26:54 +02:00
0f5b85ba51
gnu: r-lpme: Update to 1.1.2.
...
* gnu/packages/cran.scm (r-lpme): Update to 1.1.2.
2021-07-28 22:26:54 +02:00
6833c0086c
gnu: r-phangorn: Update to 2.7.1.
...
* gnu/packages/cran.scm (r-phangorn): Update to 2.7.1.
2021-07-28 22:26:54 +02:00
1b06cf529a
gnu: r-modeldata: Update to 0.1.1.
...
* gnu/packages/cran.scm (r-modeldata): Update to 0.1.1.
2021-07-28 22:26:54 +02:00
5fe6129c66
gnu: r-parsnip: Update to 0.1.7.
...
* gnu/packages/cran.scm (r-parsnip): Update to 0.1.7.
[propagated-inputs]: Add r-hardhat.
2021-07-28 22:26:54 +02:00
5ceaaeca08
gnu: r-workflowsets: Update to 0.1.0.
...
* gnu/packages/cran.scm (r-workflowsets): Update to 0.1.0.
[propagated-inputs]: Add r-hardhat and r-lifecycle.
2021-07-28 22:26:54 +02:00
ff971f4add
gnu: r-tune: Update to 0.1.6.
...
* gnu/packages/cran.scm (r-tune): Update to 0.1.6.
[propagated-inputs]: Add r-hardhat, r-lifecycle, and r-withr.
2021-07-28 22:26:54 +02:00
260d29bf76
gnu: r-workflows: Update to 0.2.3.
...
* gnu/packages/cran.scm (r-workflows): Update to 0.2.3.
[propagated-inputs]: Add r-lifecycle.
2021-07-28 22:26:54 +02:00
5fa0448590
gnu: r-spatstat-linnet: Update to 2.3-0.
...
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 2.3-0.
[propagated-inputs]: Add r-spatstat-sparse.
2021-07-28 22:26:54 +02:00
d3b8b6703c
gnu: r-spatstat-core: Update to 2.3-0.
...
* gnu/packages/cran.scm (r-spatstat-core): Update to 2.3-0.
2021-07-28 22:26:53 +02:00
9a5901e0ad
gnu: r-spatstat-geom: Update to 2.2-2.
...
* gnu/packages/cran.scm (r-spatstat-geom): Update to 2.2-2.
2021-07-28 22:26:53 +02:00
7b41c93061
gnu: r-hardhat: Update to 0.1.6.
...
* gnu/packages/cran.scm (r-hardhat): Update to 0.1.6.
2021-07-28 22:26:53 +02:00
35f9a754d8
gnu: r-isoband: Update to 0.2.5.
...
* gnu/packages/cran.scm (r-isoband): Update to 0.2.5.
2021-07-28 22:26:53 +02:00
49979bf735
gnu: r-seewave: Update to 2.1.8.
...
* gnu/packages/cran.scm (r-seewave): Update to 2.1.8.
2021-07-28 22:26:53 +02:00
03e4676138
gnu: r-showtext: Update to 0.9-3.
...
* gnu/packages/cran.scm (r-showtext): Update to 0.9-3.
2021-07-28 22:26:53 +02:00
73871946a1
gnu: r-sysfonts: Update to 0.8.4.
...
* gnu/packages/cran.scm (r-sysfonts): Update to 0.8.4.
2021-07-28 22:26:53 +02:00
c1919dacf4
gnu: r-styler: Update to 1.5.1.
...
* gnu/packages/cran.scm (r-styler): Update to 1.5.1.
2021-07-28 22:26:53 +02:00
b21351870a
gnu: r-rttf2pt1: Update to 1.3.9.
...
* gnu/packages/cran.scm (r-rttf2pt1): Update to 1.3.9.
2021-07-28 22:26:53 +02:00
d5e5809b94
gnu: r-adegenet: Update to 2.1.4.
...
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.4.
2021-07-28 22:26:52 +02:00
c84a2c1209
gnu: r-wk: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-wk): Update to 0.5.0.
2021-07-28 22:26:52 +02:00
d57de3da9c
gnu: r-compositions: Update to 2.0-2.
...
* gnu/packages/cran.scm (r-compositions): Update to 2.0-2.
2021-07-28 22:26:52 +02:00
f04f40880c
gnu: r-parallelly: Update to 1.27.0.
...
* gnu/packages/cran.scm (r-parallelly): Update to 1.27.0.
2021-07-28 22:26:52 +02:00
a6044a7573
gnu: r-rgl: Update to 0.107.10.
...
* gnu/packages/cran.scm (r-rgl): Update to 0.107.10.
[propagated-inputs]: Remove r-manipulatewidget and r-shiny.
2021-07-28 22:26:52 +02:00
c210531551
gnu: r-afex: Update to 1.0-1.
...
* gnu/packages/cran.scm (r-afex): Update to 1.0-1.
2021-07-28 22:26:52 +02:00
40648a1e20
gnu: r-credentials: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-credentials): Update to 1.3.1.
2021-07-28 22:26:52 +02:00
9e56bb33d5
gnu: r-sjplot: Update to 2.8.9.
...
* gnu/packages/cran.scm (r-sjplot): Update to 2.8.9.
[propagated-inputs]: Add r-datawizard.
2021-07-28 22:26:52 +02:00
ce8738a194
gnu: r-performance: Update to 0.7.3.
...
* gnu/packages/cran.scm (r-performance): Update to 0.7.3.
[propagated-inputs]: Add r-datawizard.
2021-07-28 22:26:52 +02:00
7a8081f23e
gnu: r-bayestestr: Update to 0.10.5.
...
* gnu/packages/cran.scm (r-bayestestr): Update to 0.10.5.
[propagated-inputs]: Add r-datawizard.
2021-07-28 22:26:51 +02:00
4590f8b338
gnu: r-glmmtmb: Update to 1.1.2.
...
* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.2.
2021-07-28 22:26:51 +02:00
0af4e95b33
gnu: r-survey: Update to 4.1-1.
...
* gnu/packages/cran.scm (r-survey): Update to 4.1-1.
2021-07-28 22:26:51 +02:00
dce011239f
gnu: r-doby: Update to 4.6.11.
...
* gnu/packages/cran.scm (r-doby): Update to 4.6.11.
2021-07-28 22:26:23 +02:00
c633e5f40a
gnu: r-flextable: Update to 0.6.7.
...
* gnu/packages/cran.scm (r-flextable): Update to 0.6.7.
2021-07-28 22:26:23 +02:00
8816d7e130
gnu: r-officer: Update to 0.3.19.
...
* gnu/packages/cran.scm (r-officer): Update to 0.3.19.
2021-07-28 22:26:23 +02:00
3bc970802b
gnu: r-renv: Update to 0.14.0.
...
* gnu/packages/cran.scm (r-renv): Update to 0.14.0.
2021-07-28 22:26:23 +02:00
db54fbe2b1
gnu: r-rastervis: Update to 0.50.3.
...
* gnu/packages/cran.scm (r-rastervis): Update to 0.50.3.
2021-07-28 22:26:23 +02:00
1ba8c81f97
gnu: r-vim: Update to 6.1.1.
...
* gnu/packages/cran.scm (r-vim): Update to 6.1.1.
2021-07-28 22:26:23 +02:00
76211cbc27
gnu: r-utf8: Update to 1.2.2.
...
* gnu/packages/cran.scm (r-utf8): Update to 1.2.2.
[native-inputs]: Add r-rmarkdown.
2021-07-28 22:26:23 +02:00
165ecfb477
gnu: r-cli: Update to 3.0.1.
...
* gnu/packages/cran.scm (r-cli): Update to 3.0.1.
2021-07-28 22:26:23 +02:00
57f04c64bc
gnu: r-laplacesdemon: Update to 16.1.6.
...
* gnu/packages/cran.scm (r-laplacesdemon): Update to 16.1.6.
2021-07-28 22:26:23 +02:00
efaa549993
gnu: r-fastmatch: Update to 1.1-3.
...
* gnu/packages/cran.scm (r-fastmatch): Update to 1.1-3.
2021-07-28 22:26:23 +02:00
e1a57fcdfa
gnu: r-jpeg: Update to 0.1-9.
...
* gnu/packages/cran.scm (r-jpeg): Update to 0.1-9.
2021-07-28 22:26:23 +02:00
16c3ebaf14
gnu: r-rvest: Update to 1.0.1.
...
* gnu/packages/cran.scm (r-rvest): Update to 1.0.1.
2021-07-28 22:26:23 +02:00
24ad9180fe
gnu: r-ggpp: Update to 0.4.1.
...
* gnu/packages/cran.scm (r-ggpp): Update to 0.4.1.
[propagated-inputs]: Remove r-generics and r-plyr.
2021-07-28 22:26:22 +02:00
55a8d2f369
gnu: r-googlesheets4: Update to 1.0.0.
...
* gnu/packages/cran.scm (r-googlesheets4): Update to 1.0.0.
[propagated-inputs]: Remove r-lifecycle; add r-cli.
2021-07-28 22:26:22 +02:00
6e27f274b2
gnu: Add r-lobstr.
...
* gnu/packages/cran.scm (r-lobstr): New variable.
2021-07-28 22:26:22 +02:00
f39deacd21
gnu: Add r-datawizard.
...
* gnu/packages/cran.scm (r-datawizard): New variable.
2021-07-28 22:26:22 +02:00
9ac9bc6051
gnu: r-with-tests: Hardcode path to coreutils’ rm
...
When running R in a container like this
guix environment --no-cwd -C --ad-hoc r-minimal -- Rscript -e 'Sys.timezone()'
it would print an additional line
sh: rm: command not found
before exiting.
* gnu/packages/statistics.scm (r-with-tests) [#:phases]: Add substitute*
to patch call to `rm` and rename phase to reflect what it does now.
2021-07-28 22:26:19 +02:00
042b6971d7
gnu: Add python-modin.
...
* gnu/packages/python-science.scm (python-modin): New variable.
2021-07-28 20:31:06 +02:00
251bfbcfaa
gnu: Add python-distributed.
...
* gnu/packages/python-science.scm (python-distributed): New variable.
2021-07-28 20:31:06 +02:00
41431282e2
gnu: Add python-zict.
...
* gnu/packages/python-xyz.scm (python-zict): New variable.
2021-07-28 20:31:06 +02:00
45ee09dc96
gnu: Add python-heapdict.
...
* gnu/packages/python-xyz.scm (python-heapdict): New variable.
2021-07-28 20:31:06 +02:00
532cfc5bd2
gnu: python-pyarrow: Fix parquet support.
...
Co-authored-by: Phil Beadling <phil@beadling.co.uk>.
* gnu/packages/databases.scm (python-pyarrow)[arguments]: Add phases
patch-cmake-variables, patch-parquet-library, and set-PYARROW_WITH_PARQUET.
[propagated-inputs]: Add "include" output of apache-arrow package.
2021-07-28 20:31:06 +02:00
3a150e9f12
gnu: python-pandas: Update to 1.3.0.
...
* gnu/packages/python-science.scm (python-pandas): Update to 1.3.0.
[arguments]: Adjust check phase.
2021-07-28 20:31:06 +02:00
242221e380
gnu: python-dask: Update to 2021.7.1.
...
* gnu/packages/python-xyz.scm (python-dask): Update to 2021.7.1.
[arguments]: Do not skip test_shuffle.
2021-07-28 20:31:05 +02:00
f01d4b197a
gnu: python-partd: Update to 1.2.0.
...
* gnu/packages/python-xyz.scm (python-partd): Update to 1.2.0.
2021-07-28 20:31:05 +02:00
27c6cab2c6
gnu: python-numexpr: Update to 2.7.3.
...
* gnu/packages/python-xyz.scm (python-numexpr): Update to 2.7.3.
2021-07-28 20:31:05 +02:00
145296dbcb
gnu: python-cloudpickle: Update to 1.6.0.
...
* gnu/packages/python-xyz.scm (python-cloudpickle-testpkg): New variable.
(python-cloudpickle): Update to 1.6.0; inherit from
python-cloudpickle-testpkg.
[source]: Fetch from git repository.
[native-inputs]: Add python-cloudpickle-testpkg; replace python-tornado with
python-tornado-6.
2021-07-28 20:31:05 +02:00
2422fbf6b2
gnu: python2-cloudpickle: Override version, source, and native-inputs.
...
* gnu/packages/python-xyz.scm (python2-cloudpickle)[version]: Explicitly set
to 1.3.0.
[source]: Copy from base package.
[native-inputs]: Do not inherit; copy.
2021-07-28 20:31:05 +02:00
c486a61c27
gnu: cmake: Update to 3.21.1.
...
* gnu/packages/cmake.scm (cmake): Update to 3.21.1.
[arguments]: Skip one more test.
2021-07-28 20:31:05 +02:00
c20c9e1685
gnu: julia-distances: Update flakey tests.
...
* gnu/packages/julia-xyz.scm (julia-distances)[arguments]: Adjust the
custom 'skip-flakey-tests phase.
2021-07-28 16:05:33 +03:00
fcc900bd52
gnu: julia-docstringextensions: Skip tests.
...
* gnu/packages/julia-xyz.scm (julia-docstringextensions)[arguments]:
Skip tests.
2021-07-28 16:05:33 +03:00
21747ffa87
gnu: julia-datavalues: Skip tests.
...
* gnu/packages/julia-xyz.scm (julia-datavalues)[arguments]: Skip tests.
2021-07-28 16:05:33 +03:00
8832df0412
gnu: julia-compat: Update to 3.31.0.
...
* gnu/packages/julia-xyz.scm (julia-compat): Update to 3.31.0.
2021-07-28 16:05:33 +03:00
a8977845cd
gnu: global: Update to 6.6.7.
...
* gnu/packages/code.scm (global): Update to 6.6.7.
2021-07-28 16:05:33 +03:00
cbee534391
gnu: julia-jllwrappers: Add julia-preferences.
...
* gnu/packages/julia-jll.scm (julia-jllwrappers)[propagated-inputs]: Add
julia-preferences.
2021-07-28 16:05:33 +03:00
f7eaa69dc2
gnu: Add julia-preferences.
...
* gnu/packages/julia-xyz.scm (julia-preferences): New variable.
2021-07-28 16:05:33 +03:00
6886c4960d
gnu: julia: Skip tests on aarch64-linux.
...
* gnu/packages/julia.scm (julia)[arguments]: Skip tests when building
for aarch64-linux.
2021-07-28 16:05:32 +03:00
cc85829fb9
gnu: llvm-julia: Overide build-type.
...
* gnu/packages/julia.scm (llvm-julia)[arguments]: Move CMAKE_BUILD_TYPE
config from configure-flags to build-type.
2021-07-28 16:05:32 +03:00
6adea67cb0
gnu: libuv-julia: Clean up package definition.
...
* gnu/packages/julia.scm (libuv-julia)[source]: Use git-file-name.
[build-system]: Remove field.
[arguments]: Remove field.
2021-07-28 16:05:32 +03:00
55bb794248
gnu: julia: Update to 1.6.1.
...
* gnu/packages/julia.scm (julia): Update to 1.6.1.
[arguments]: Adjust custom 'prepare-deps phase. Remove custom
'fix-precompile phase. Add new 'shared-objects-path phase to fix paths
to shared objects. Add new 'adjust-test-suite phase to adjust for
differences in bundled vs packaged libraries. Adjust custom
'disable-broken-tests phase for new version. Add symlinks to libs in
'symlink-libraries phase. In make-flags add more finegrained compilation
targets for x86_64-linux. Update make-flags for changes since last
version.
[inputs]: Add nghttp2:lib, gfortran:lib, curl-ssh. Remove arpack-ng,
curl. Sort alphabetically.
[native-inputs]: Add nss-certs. Sort alphabetically.
(libuv-julia): Update to newer revision.
(libunwind-julia)[source]: Add new patch.
(llvm-julia): Inherit from llvm-11.
[source]: Update patch list.
[arguments]: Apply minority of the Julia specific patches in
'julia-patches phase.
[inputs]: Add julia patches.
Co-Authored-By: Nicolò Balzarotti <nicolo@nixo.xyz>.
Co-Authored-By: zimoun <zimon.toutoune@gmail.com>.
Co-Authored-By: Efraim Flashner <efraim@flashner.co.il>.
2021-07-28 16:05:32 +03:00
0faf5f1dd6
gnu: Add curl-ssh.
...
* gnu/packages/curl.scm (curl-ssh): New hidden package.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:32 +03:00
2d4fa647b7
gnu: julia-staticarrays: Update to 1.2.5
...
* gnu/packages/julia-xyz.scm (julia-staticarrays): Update to 1.2.5
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:32 +03:00
1978d716a9
gnu: openlibm: Fix cross-compiling.
...
* gnu/packages/maths.scm (openlibm)[arguments]: Add configure-flag to
use cc-for-target.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:31 +03:00
4709b74bc8
gnu: openlibm: Update to 0.7.4.
...
* gnu/packages/maths.scm (openlibm): Update to 0.7.4.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:31 +03:00
7db9573e86
gnu: Add pcre2-10.36.
...
* gnu/packages/pcre.scm (pcre2-10.36): New variable.
Co-Authored-By: zimoun <zimoun.toutoune@gmail.com>.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:31 +03:00
2459cff9ae
gnu: Add utf8proc-2.6.1.
...
* gnu/packages/textutils.scm (utf8proc-2.6.1): New variable.
Co-Authored-By: zimoun <zimon.toutoune@gmail.com>.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:31 +03:00
7d93b21ab1
gnu: glibc-for-bootstrap: Update patch.
...
There was/is something funny going on with the bootstrap glibc. The
symbol for posix_spawnp points to getopt_r. Which in turn leads to a
lot of crashed in tests later on. I extended the glibc-bootstrap patch
to work around this bug.
* gnu/packages/patches/glibc-bootstrap-system.patch: Adjust patch to
work correctly with new architectures.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2021-07-28 16:05:31 +03:00
8afd85538a
gnu: global: Fix lisp install dir.
...
* gnu/packages/code.scm (global)[arguments]: Adjust custom 'post-install
phase to move emacs files to the correct directory.
2021-07-28 16:05:31 +03:00
b07c7f0da6
gnu: python-pikepdf: Update to 2.16.0.
...
* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.16.0.
2021-07-27 21:35:52 +02:00
d0ec73907c
gnu: telescope: Update to 0.4.1.
...
* gnu/packages/web-browsers.scm (telescope): Update to 0.4.1.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:36:22 +02:00
f87f60a8b5
gnu: emacs-link-hint: Update to 0.1-3.9fbf196.
...
* gnu/packages/emacs-xyz.scm (emacs-link-hint): Update to 0.1-3.9fbf196.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:28 +02:00
f62c140f47
gnu: emacs-elpher: Update to 2.10.3.
...
* gnu/packages/emacs-xyz.scm (emacs-elpher): Update to 2.10.3.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:28 +02:00
4c4cf3d692
gnu: emacs-typit: Update to 0.2.1-2.fa125bf.
...
* gnu/packages/emacs-xyz.scm (emacs-typit): Update to 0.2.1-2.fa125bf.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:28 +02:00
143d21fa95
gnu: emacs-typit: Fix dictionary location.
...
Move the dictionary directory to be next to the lisp files, where it is
expected to be.
* gnu/packages/emacs-xyz.scm (emacs-typit)[arguments]
<#:phases>: Remove install-dictionaries phase.
<#:include>: Include dictionaries.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:27 +02:00
3968134a4d
gnu: emacs-org-roam-bibtex: Update to 0.6.0.
...
* gnu/packages/emacs-xyz.scm (emacs-org-roam-bibtex): Update to 0.6.0.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:27 +02:00
3c76399745
gnu: emacs-org-roam: Update to 2.0.0.
...
* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 2.0.0.
[propagated-inputs]: Add emacs-magit.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:27 +02:00
157f2f7f03
gnu: Add emacs-org-cv.
...
* gnu/packages/emacs-xyz.scm (emacs-org-cv): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-27 19:10:26 +02:00
8cfd9ef831
gnu: mesa-opencl-icd: Use absolute path for the library.
...
* gnu/packages/gl.scm (mesa-opencl-icd): Use absolute path for OpenCL
platform library in "mesa.icd" file. With this patch setting
LD_LIBRARY_PATH=$LIBRARY_PATH is no longer needed to run OpenCL
applications.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2021-07-27 18:36:34 +02:00
b62e74e053
gnu: linux-libre 4.19: Update to 4.19.200.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.200.
(linux-libre-4.19-pristine-source): Update hash.
2021-07-27 12:35:01 -04:00
2b26915552
gnu: linux-libre 5.4: Update to 5.4.137.
...
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.137.
(linux-libre-5.4-pristine-source): Update hash.
2021-07-27 12:35:01 -04:00
86f2e3bfdc
gnu: linux-libre 5.10: Update to 5.10.55.
...
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.55.
(linux-libre-5.10-pristine-source): Update hash.
2021-07-27 12:35:01 -04:00
15e484933f
gnu: linux-libre: Update to 5.13.7.
...
* gnu/packages/linux.scm (linux-libre-5.13-version): Update to 5.13.7.
(linux-libre-5.13-pristine-source): Update hash.
2021-07-27 12:34:57 -04:00
e38b4d5ceb
gnu: coq: Update to 8.13.2.
...
* gnu/packages/coq.scm (coq): Update to 8.13.2.
(coq-ide-server, coq-ide): New packages.
(coq-gappa): Update to 1.4.6.
(coq-bignums): Update to 8.13.0.
(coq-interval): Update to 1.3.0.
(coq-equations): Update to 1.2.4.
2021-07-31 23:06:16 +02:00
3c44aa2b74
gnu: coq-stdpp: Update to 1.5.0.
...
* gnu/packages/coq.scm (coq-stdpp): Update to 1.5.0.
2021-07-31 23:06:14 +02:00
3589c17556
gnu: lablgtk3: Install with version information.
...
This is required so recent versions of coq can check version
requirements.
* gnu/packages/ocaml.scm (lablgtk3)[arguments]: Ensure version is added
to the META file.
2021-07-31 23:06:12 +02:00
96707d5a30
gnu: ocaml-zarith: Update to 1.12.
...
* gnu/packages/ocaml.scm (ocaml-zarith): Update to 1.12.
2021-07-31 23:05:59 +02:00
7c6ace67bb
Revert "gnu: sbcl: Update to 2.1.7."
...
This SBCL version seems to have a bug that breaks many packages.
This reverts commit b07581d6e2
2021-07-31 19:33:39 +02:00
145e897530
gnu: Add sfizz.
...
* gnu/packages/music.scm (sfizz): New variable.
2021-07-31 18:40:57 +02:00
94ece4f8f7
gnu: isync: Update to 1.4.3.
...
* gnu/packages/mail.scm (isync): Update to 1.4.3.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-31 14:15:46 +02:00
95b08b9137
gnu: emacs-vertico: Update to 0.13.
...
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.13.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-07-31 14:04:19 +02:00
adb84ae8ea
gnu: u-boot-rockpro64-rk3399: Enable 'set-environment phase.
...
Fixes <https://bugs.gnu.org/49550 >.
* gnu/packages/bootloaders.scm (u-boot-rockpro64-rk3399)[arguments]: Run
'set-environment phase after 'unpack instead of non-existent
'patch-rockpro64-config phase.
2021-07-31 12:31:04 +01:00
b07581d6e2
gnu: sbcl: Update to 2.1.7.
...
* gnu/packages/lisp.scm (sbcl): Update to 2.1.7.
2021-07-31 13:23:13 +02:00
7a3ef338db
gnu: sbcl-alexandria: Update to 1.4.
...
* gnu/packages/lisp-xyz.scm (sbcl-alexandria): Update to 1.4.
2021-07-31 13:23:03 +02:00
8f6275fb49
gnu: emacs-ts: Update to 0.2.1.
...
* gnu/packages/emacs-xyz.scm (emacs-ts): Update to 0.2.1.
2021-07-31 09:29:11 +02:00
a62d79e755
gnu: emacs-tramp: Update to 2.5.1.1.
...
* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.1.1.
2021-07-31 09:25:59 +02:00
db2c7e70ad
gnu: racket-minimal: Bootstrap from C.
...
This commit bootstraps the Racket compiler and runtime system from source,
including Racket CS as well as both variants of Racket BC. (One remaining
limitation is discussed in comments added to gnu/packages/racket.scm.)
In the process, it moves to building minimal Racket from the Git repository,
rather than the packaged source tarballs. The Git repository is slightly
better as the ``corresponding source'':
1. A few packages especially closely tied to the Racket core implementation
(like "compiler-lib", "base", and "racket-doc") are developed in the
same Git repository. Having them use the same Guix origin, too, will
help to keep them in sync.
2. The top-level Makefile in the Git repository is an important
``script[] used to control compilation and installation.''
In particular, it cooperates with the "distro-build" package to
create the source tarballs and installers for a Racket distribution.
(Racket supports a notion of custom distributions.)
3. It is ``the preferred form ... for making modifications'' to the core
Racket implementation.
Racket releases are tagged in the Git repository (e.g. "v8.1"). At the
beginning of each release cycle, a branch is created to stabilizer a version
for extra testing. Active development happens on the "master" branch.
* gnu/packages/racket-minimal-sh-via-rktio.patch: Adjust for extra directory
layer.
* gnu/local/racket.scm (cfg-flag:sh-for-rktio, cfg-flag:enable-lt,
cfg-flag:enable-racket, unpack-nanopass+stex,
%main-repo-main-distribution-pkgs): New private variables.
* gnu/local/racket.scm (racket-minimal)[source]: Use Git.
[source](snippet): Unbundle nanopass, stex, and libffi.
[native-inputs]: Use racket-bootstrap-chez-bootfiles, plus its
dependencies (for Chez, plus a Racket for bootstrap pig).
[arguments]: Revise extensively.
* gnu/local/racket.scm (racket-minimal-bc-3m, racket-minimal-bc-cgc): New
packages, hidden at least for now.
(racket-bootstrap-chez-bootfiles): Another new package, but this one is
especially likely to stay hidden.
* gnu/local/racket.scm (racket)[origin](snippet): Unbundle packages
developed in the main Git repository, but leave their links.rktd and
pkgs.rktd entries in place.
[native-inputs]: Add the main Racket Git repository.
[arguments](#:phases): Adjust 'unpack-packages to also unpack package
sources from the main Racket Git repository.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:25 +02:00
65bad4d036
gnu: racket: Unbundle racket-minimal.
...
This change takes advantage of improved support for layered
and tethered installations in Racket 8.2.
* gnu/packages/racket.scm (extend-layer): New private variable.
This is a script for configuring a new config-tethered layer
chaining to an existing Racket installation.
* gnu/packages/racket.scm (racket)[source](snippet): Unbundle
`racket-minimal`.
[inputs]: Remove inputs that properly belong to `racket-minimal`.
[native-inputs]: Add `racket-minimal` and `extend-layer`.
[arguments]: Stop inheriting from `racket-minimal`. Add phase
'unpack-packages to move the sources and links file into place.
Replace 'configure phase using `extend-layer`.
Replace 'build phase using `raco setup`.
Delete 'install phase.
* gnu/packages/patches/racket-sh-via-rktio.patch: Rename to ...
* gnu/packages/patches/racket-minimal-sh-via-rktio.patch: ... this
file to placate `guix lint`.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/racket.scm (racket-minimal)[source]: Likewise.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:25 +02:00
1ae95ebcdd
gnu: racket: Update to 8.2.
...
* gnu/packages/racket.scm (racket-minimal, racket): Update to 8.2.
* gnu/packages/racket.scm (racket-minimal)[#:arguments]: Fix
patch-config.rktd-lib-search-dirs phase. When a config.rktd file
doesn't contain an entry for `lib-search-dirs`, the default is
equivalent to `'(#f)`, not `'()`.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:24 +02:00
a07f39b7da
gnu: Add libmobi.
...
* gnu/packages/ebook.scm (libmobi): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:24 +02:00
0ca7435fe0
gnu: guile-dbd-sqlite3: Replace 'url-fetch' by 'git-fetch'.
...
Fixes https://debbugs.gnu.org/25913 .
* gnu/packages/guile-xyz.scm (guile-dbi)[source]: Replace 'url-fetch'
by'git-fetch'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:24 +02:00
82cfefc2a0
gnu: guile-dbi: Replace 'url-fetch' by 'git-fetch'.
...
Fixes https://debbugs.gnu.org/25913 .
* gnu/packages/guile-xyz.scm (guile-dbi)[source]: Replace 'url-fetch'
by'git-fetch'.
[home-page]: Update.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:24 +02:00
0e9b77d8d0
gnu: python-yubikey-manager: Fix libykpers reference.
...
* gnu/packages/security-token.scm (python-yubikey-manager): Fix libykpers reference.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-31 01:03:24 +02:00
630c39d8df
gnu: onnx: Change source to 'git-fetch'.
...
* gnu/packages/machine-learning.scm (onnx)[source]: Change to
'git-fetch'. Add "onnx-skip-model-downloads.patch".
[arguments]: Add 'make-test-directory-writable' phase.
* gnu/packages/patches/onnx-skip-model-downloads.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-31 01:03:24 +02:00
fa2d94b5e3
gnu: python-onnx: Rename to "onnx".
...
* gnu/packages/machine-learning.scm (python-onnx): Rename to...
(onnx): ... this, and change 'name' field accordingly.
(python-onnx): New variable.
* gnu/packages/patches/python-onnx-shared-libraries.patch: Rename to...
* gnu/packages/patches/onnx-shared-libraries.patch: ... this.
* gnu/packages/patches/python-onnx-use-system-googletest.patch: Rename
to...
* gnu/packages/patches/onnx-use-system-googletest.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2021-07-31 01:03:24 +02:00
2b55f914c3
gnu: python-onnx: Install libonnx.so and libonnx_proto.so.
...
* gnu/packages/patches/python-onnx-shared-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/machine-learning.scm (python-onnx)[source]: Use it.
[arguments]: New field.
2021-07-31 01:03:23 +02:00
bb5b6b09dc
gnu: python-onnx: Delete bundled software.
...
* gnu/packages/machine-learning.scm (python-onnx)[source]: Delete
the 'third_party' directory.
2021-07-31 01:03:23 +02:00
3ac3ca367a
gnu: python-onnx: Move comment to the patch header.
...
* gnu/packages/machine-learning.scm (python-onnx): Move patch comment to...
* gnu/packages/patches/python-onnx-use-system-googletest.patch: ... here.
2021-07-31 01:03:23 +02:00
5f9dc326d9
gnu: python-onnx: Update to 1.9.0.
...
* gnu/packages/machine-learning.scm (python-onnx): Update to 1.9.0.
2021-07-31 01:03:23 +02:00
721e380764
gnu: liquidsfz: Use fixed libsndfile.
...
* gnu/packages/music.scm (liquidsfz)[inputs]: Replace libsndfile with
libsndfile/fixed.
2021-07-30 22:34:45 +02:00
4c013867b6
gnu: Add libsndfile/fixed.
...
* gnu/packages/pulseaudio.scm (libsndfile/fixed): New variable.
2021-07-30 22:34:45 +02:00
7041abe38a
gnu: parallel: Update to 20210722.
...
* gnu/packages/parallel.scm (parallel): Update to 20210722.
2021-07-30 19:17:52 +03:00
730f11ba92
gnu: python-elasticsearch: Update to 7.13.4.
...
* gnu/packages/python-web.scm (python-elasticsearch): Update to 7.13.4.
[native-inputs]: Remove.
[propagated-inputs]: Add PYTHON-CERTIFI.
2021-07-30 16:18:41 +02:00
311cc4ee65
gnu: openttd-opensmx: Update to 0.4.0.
...
* gnu/packages/games.scm (openttd-opensmx): Update to 0.4.0.
[native-inputs]: Add tar.
[#:make-flags]: Drop INSTALL_DIR. Add DIR_NAME and TAR.
[#:tests?]: New argument.
[#:phases]: Replace ‘install’ with a simple copy operation and drop
post-install.
2021-07-30 15:22:16 +02:00
0a1df50e9f
gnu: Fix OpenSFX build.
...
OpenSFX 1.0.1 uses a different build system from the old one, which causes
weird errors.
* gnu/packages/games.scm (openttd-opensfx)[native-inputs]: Add tar.
[#:make-flags]: Drop INSTALL_DIR. Add DIR_NAME and TAR.
[#:tests?]: New argument.
[#:phases]: Add ‘prebuild’. Replace ‘install’ with a simple copy.
2021-07-30 15:22:16 +02:00
9b41c08f41
gnu: Add C-Vise.
...
* gnu/packages/debug.scm (c-vise): New variable.
2021-07-30 08:13:44 -05:00
f71b91a22b
gnu: Add python-pebble.
...
* gnu/packages/python-xyz.scm (python-pebble): New variable.
2021-07-30 08:13:38 -05:00
1484de9eff
gnu: Fix OpenSFX URI.
...
In commit 1cdf1cd7fehttps://cdn.openttd.org/opensfx-releases >.
[sha256]: Update accordingly.
2021-07-30 14:29:21 +02:00
e638a9a1f7
gnu: openttd-opengfx: Update to 0.6.1.
...
* gnu/packages/games.scm (openttd-opengfx): Update to 0.6.1.
2021-07-30 10:01:31 +02:00
1cdf1cd7fe
gnu: openttd-opensfx: Update to 1.0.1.
...
* gnu/packages/games.scm (openttd-opensfx): Update to 1.0.1.
[source]: Use <https://cdn.openttd.org >.
[license]: Update to CC BY-SA 3.0.
2021-07-30 10:00:42 +02:00
9f48f71398
gnu: emacs-string-inflection: Update to 1.0.14.
...
* gnu/packages/emacs-xyz.scm (emacs-string-inflection): Update to 1.0.14.
2021-07-30 08:34:29 +02:00
daeef2e7f4
gnu: Add createrepo-c.
...
* gnu/packages/rpm.scm (createrepo-c): New variable.
2021-07-29 22:03:34 -04:00
0413e90ab1
gnu: Add libmodulemd.
...
* gnu/packages/rpm.scm (libmodulemd): New variable.
2021-07-29 22:03:34 -04:00
4613a9948a
gnu: Add drpm.
...
* gnu/packages/rpm.scm: Add file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2021-07-29 22:03:34 -04:00
e81228166e
gnu: web: Move libyaml and libcyaml to (gnu packages serialization).
...
Files to be adjusted were searched with the following command:
$ git ls-files | xargs grep -l -E ',libc?yaml' | \
xargs grep -L '(gnu packages serialization)'
* gnu/packages/web.scm (libyaml, libyaml+static, libcyaml): Move to...
* gnu/packages/serialization.scm: ... here.
2021-07-29 22:03:33 -04:00
84fa28234f
gnu: Add zchunk.
...
* gnu/packages/compression.scm (zchunk): New variable.
2021-07-29 22:03:33 -04:00
00c55e856f
gnu: Add nginx-rtmp-module.
...
* gnu/packages/web.scm (nginx-rtmp-module): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-07-29 21:54:55 +02:00
b402a3ec86
gnu: Add XNNPACK.
...
* gnu/packages/machine-learning.scm (xnnpack): New variable.
* gnu/packages/patches/xnnpack-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:55 +02:00
1daa662722
gnu: Add FP16.
...
* gnu/packages/patches/fp16-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (fp16): New variable.
2021-07-29 21:54:55 +02:00
065d45e8a1
gnu: Add Psimd.
...
* gnu/packages/parallel.scm (psimd): New variable.
2021-07-29 21:54:55 +02:00
4c5ad82780
gnu: Add cpuinfo.
...
* gnu/packages/parallel.scm (cpuinfo): New variable.
* gnu/packages/patches/cpuinfo-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:55 +02:00
646b5ad983
gnu: Add googlebenchmark.
...
* gnu/packages/check.scm (googlebenchmark): New variable.
2021-07-29 21:54:54 +02:00
18d04fef0f
gnu: Add pthreadpool.
...
* gnu/packages/parallel.scm (pthreadpool): New variable.
* gnu/packages/patches/pthreadpool-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:54 +02:00
a9bc8a25eb
gnu: Add FXDiv.
...
* gnu/packages/maths.scm (fxdiv): New variable.
* gnu/packages/patches/fxdiv-system-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2021-07-29 21:54:54 +02:00
363fe99c1e
gnu: Add wolfSSL.
...
* gnu/packages/tls.scm (wolfssl): New variable.
2021-07-27 12:34:56 -04:00
9d32e6cdad
gnu: Restore the correct order of the golang module.
...
* gnu/packages/golang.scm: Move the Go compilers back to the beginning
of the file.
2021-07-27 12:34:56 -04:00
907f835e19
gnu: pigx-rnaseq: Update to 0.0.18.
...
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.18.
2021-08-11 19:33:38 +02:00
938d77d972
gnu: linux-libre 4.4: Update to 4.4.280.
...
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.280.
(linux-libre-4.4-pristine-source): Update hash.
2021-07-27 12:34:57 -04:00
b1c97ff60b
gnu: Duplicity: Depend on python-paramiko.
...
Fixes <https://bugs.gnu.org/49979 >.
* gnu/packages/backup.scm (duplicity)[native-inputs]: Add python-paramiko.
2021-07-27 12:34:56 -04:00
973842acbc
gnu: Add unclutter-xfixes
...
* gnu/packages/xdisorg.scm (unclutter-xfixes): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2021-08-11 16:35:29 +02:00
168d107abf
gnu: rocm-opencl-runtime: Shorten patch file name.
...
This appeases 'guix lint -c patch-file-names'.
* gnu/packages/patches/rocm-opencl-runtime-3.10.0-add-rocclr-include-directories.patch:
Rename to...
* gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch: ... this.
* gnu/packages/rocm.scm (rocm-opencl-runtime)[source]: Adjust accordingly.
* gnu/local.mk (dist_patch_DATA): Likewise.
2021-08-11 16:35:28 +02:00
9b54559e23
gnu: rocm-opencl-runtime: Use a non-redirecting source URL.
...
* gnu/packages/rocm.scm (rocm-opencl-runtime)[source]: Use 'home-page'
as the URL; since it lacks the ".git" prefix, that placates 'guix lint'.
2021-08-11 16:35:28 +02:00
d39b95b1c2
gnu: emacs-vertico: Update to 0.14.
...
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.14.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-08-11 15:38:02 +02:00
3f4303efde
gnu: emacs-marginalia: Update to 0.8.
...
* gnu/packages/emacs-xyz.scm (emacs-marginalia): Update to 0.8.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-08-11 15:38:02 +02:00
006b9c85f5
gnu: emacs-consult: Update to 0.10.
...
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.10.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-08-11 15:38:02 +02:00
d908da107e
gnu: emacs-corfu: Update to 0.11.
...
* gnu/packages/emacs-xyz.scm (emacs-corfu): Update to 0.11.
Signed-off-by: Leo Prikler <leo.prikler@student.tugraz.at>
2021-08-11 15:38:01 +02:00
Ricardo Wurmus
Marius Bakke
Efraim Flashner
Nicolas Goaziou
Mathieu Othacehe
Ron Nazarov via Guix-patches via
Maxime Devos
Leo Famulari
Lars-Dominik Braun
Jean-Baptiste Volatier
Franz Josef
cage
Alexandr Vityazev
Simon South
Morgan Smith
Vinicius Monego
Ivan Gankevich
Julien Lepiller
Pierre Neidhardt
Xinglu Chen
Pierre Langlois
Philip McGrath
la snesne
zimoun
Dhruvin Gandhi
Ludovic Courtès
Ludovic Courtès
Leo Prikler
Eric Bavier
Ron Nazarov
Maxim Cournoyer
Jack Hill
iKaSeRo