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88844 Commits (ec23d7caa871471ad9425a21b34e1f9692a524d4)

Author SHA1 Message Date
Marius Bakke 705c609048
gnu: Add python-autopage.
* gnu/packages/python-xyz.scm (python-autopage): New variable.
2022-06-21 17:30:44 +02:00
Marius Bakke c7738ffcad
gnu: python-ipython-sql: Remove prettytable version constraint.
* gnu/packages/python-xyz.scm (python-ipython-sql)[arguments]: Add #:phases.
2022-06-21 17:30:44 +02:00
Marius Bakke a358602d35
gnu: python-ipython-sql: Update to 0.4.1.
* gnu/packages/python-xyz.scm (python-ipython-sql): Update to 0.4.1.
[arguments]: Remove #:phases.  Add #:tests?.
2022-06-21 17:30:44 +02:00
Marius Bakke 41bf90f966
gnu: python-breathe: Update to 4.34.0.
* gnu/packages/sphinx.scm (python-breathe): Update to 4.34.0.
2022-06-21 17:30:44 +02:00
Marius Bakke 3e17136cc4
gnu: python-django-netfields: Update to 1.3.0.
* gnu/packages/django.scm (python-django-netfields): Update to 1.3.0.
2022-06-21 17:30:44 +02:00
Marius Bakke 3f310b6565
gnu: python-django-auth-ldap: Update to 4.1.0.
* gnu/packages/django.scm (python-django-auth-ldap): Update to 4.1.0.
2022-06-21 17:30:44 +02:00
Marius Bakke 779853e926
gnu: python-pika: Update to 1.2.1.
* gnu/packages/python-xyz.scm (python-pika): Update to 1.2.1.
[arguments]: Adjust tests for nose2.  Respect #:tests? keyword.
[native-inputs]: Remove PYTHON-NOSE; add PYTHON-NOSE2.
2022-06-21 17:30:44 +02:00
Marius Bakke c3f6049a41
gnu: python-nose2: Update to 0.11.0.
* gnu/packages/check.scm (python-nose2): Update to 0.11.0.
[arguments]: Add #:phases.  Remove #:tests?.
[propagated-inputs]: Remove PYTHON-COV-CORE and PYTHON-PYTEST-COV.
[native-inputs]: Add PYTHON-COVERAGE.
2022-06-21 17:30:44 +02:00
Marius Bakke acdd0c282f
gnu: python-faiss: Fix build on Python 3.9.
* gnu/packages/graph.scm (python-faiss)[arguments]: Remove "m" suffix to
Python library path.
2022-06-21 17:30:44 +02:00
Andreas Enge d13ffd1580
gnu: cmh: Add patch to work with current fplll.
* gnu/packages/patches/cmh-support-fplll.patch: New file.
* gnu/packages/algebra.scm (cmh)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
2022-06-21 16:12:47 +02:00
muradm 0fe0c739f5
gnu: Update kanshi to 1.2.0.
* gnu/packages/wm.scm (kanshi): Update to 1.2.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-06-21 12:35:17 +01:00
Nikolay Korotkiy 7ba04443c5
gnu: sfeed: Update to 1.5.
* gnu/packages/suckless.scm (sfeed): Update to 1.5.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-06-21 12:35:17 +01:00
Manolis Ragkousis 55567ca434
gnu: networking: Add arp-scan
* gnu/packages/networking.scm (arp-scan): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2022-06-21 12:35:15 +01:00
Christopher Baines 76baecf58f
gnu: nar-herder: Add guile-lzlib as an input.
* gnu/packages/package-management.scm
(nar-herder)[native-inputs,propagated-inputs]: Add guile-lzlib.
[arguments]: Wrap with guile-lzlib.
2022-06-21 12:35:05 +01:00
Nicolas Goaziou 7911f6ff04
gnu: fet: Update to 6.5.3.
* gnu/packages/education.scm (fet): Update to 6.5.3.
2022-06-21 11:39:34 +02:00
Efraim Flashner deeec484a6
gnu: python-pyzmq: Remove bundled and generated code.
* gnu/packages/python-xyz.scm (python-pyzmq)[source]: Add snippet to
remove bundled source code and pre-cythonized files.
2022-06-21 11:49:44 +03:00
Nicolas Goaziou 2773cc8927
gnu: emacs-web-mode: Update to 17.2.1.
* gnu/packages/emacs-xyz.scm (emacs-web-mode): Update to 17.2.1.
2022-06-21 10:42:42 +02:00
Nicolas Goaziou 0e415a8c6f
gnu: emacs-embark: Update to 0.17.
* gnu/packages/emacs-xyz.scm (emacs-embark): Update to 0.17.
2022-06-21 10:39:47 +02:00
Nicolas Goaziou d608201d6e
gnu: emacs-vertico: Update to 0.24.
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.24.
2022-06-21 10:38:01 +02:00
Nicolas Goaziou b27c137cb8
gnu: emacs-flycheck: Update to 32.
* gnu/packages/emacs-xyz.scm (emacs-flycheck): Update to 32.
2022-06-21 10:34:52 +02:00
Nicolas Goaziou c4b9c2e6c8
gnu: emacs-consult: Update to 0.18.
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.18.
[propagated-inputs]: Add emacs-compat.
2022-06-21 10:31:13 +02:00
Nicolas Goaziou b66f8aa154
gnu: Add emacs-compat.
* gnu/packages/emacs-xyz.scm (emacs-compat): New variable.
2022-06-21 10:31:01 +02:00
Nicolas Goaziou c07235adfc
gnu: emacs-elpher: Update to 3.4.1.
* gnu/packages/emacs-xyz.scm (emacs-elpher): Update to 3.4.1.
2022-06-21 10:10:59 +02:00
Marius Bakke c546a776d5
gnu: PostgreSQL: Update to 14.4.
* gnu/packages/databases.scm (postgresql-14): Update to 14.4.
2022-06-20 23:51:21 +02:00
Marius Bakke b4a14edf69
gnu: drbd-utils: Generate manual pages.
* gnu/packages/cluster.scm (drbd-utils)[arguments]: Remove
"--with-prebuiltman" from #:configure-flags.  Add phase
'disable-ja-translation.
[native-inputs]: Add DOCBOOK-XML, DOCBOOK-XML-4.4, DOCBOOK-XSL, LIBXML2,
LIBXSLT, and RUBY-ASCIIDOCTOR.
2022-06-20 23:51:20 +02:00
Marius Bakke 946ec002b0
gnu: drbd-utils: Use new style.
* gnu/packages/cluster.scm (drbd-utils)[arguments]: Use G-expression.
[native-inputs]: Remove labels.
2022-06-20 23:51:20 +02:00
Marius Bakke 1216eb5a5a
gnu: drbd-utils: Update to 9.21.2.
* gnu/packages/cluster.scm (drbd-utils): Update to 9.21.2.
2022-06-20 23:51:20 +02:00
Marius Bakke e8fd7017c8
gnu: drbd-utils: Add release-monitoring-url.
* gnu/packages/cluster.scm (drbd-utils)[properties]: New field.
2022-06-20 23:51:20 +02:00
Efraim Flashner 2af3f5eef0
gnu: libhttpd: Update to 1.4.65.
* gnu/packages/web.scm (libhttpd): Update to 1.4.65.
2022-06-20 15:47:29 +03:00
Nikolay Korotkiy 723d1bbbd2
gnu: gpxsee: Update to 11.1.
* gnu/packages/gps.scm (gpxsee): Update to 11.1.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-20 14:02:27 +02:00
Paul A. Patience a606eea4bc
gnu: Add cl-compiler-macro.
* gnu/packages/lisp-xyz.scm (sbcl-compiler-macro, cl-compiler-macro,
  ecl-compiler-macro): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-20 14:02:27 +02:00
Efraim Flashner ceb508528f
gnu: rust-cargo-c: Add missing input.
This is a follow-up to 6f2df20b0f.

* gnu/packages/rust-apps.scm (rust-cargo-c)[inputs]: Add libgit2-1.3.
2022-06-20 14:31:40 +03:00
Efraim Flashner 6f2df20b0f
gnu: rust-libgit2-sys-0.12: Remove bundled library.
This fixes <https://issues.guix.gnu.org/56020>.

* gnu/packages/crates-io.scm (rust-libgit2-sys-0.12)[source]: Add
snippet to remove bundled code.
2022-06-20 14:16:13 +03:00
Efraim Flashner 8d342711dd
gnu: vlc: Update to 3.0.17.4.
* gnu/packages/video.scm (vlc): Update to 3.0.17.4.
2022-06-20 13:57:52 +03:00
Efraim Flashner d2580a3f2e
gnu: vlc: Add release-monitoring-url property.
* gnu/packages/video.scm (vlc)[properties]: New field.
2022-06-20 13:35:11 +03:00
Mathieu Othacehe a692824006
gnu: xdg-desktop-portal-gtk: Update to 1.14.0.
* gnu/packages/freedesktop.scm (xdg-desktop-portal-gtk): Update to 1.14.0.
2022-06-20 12:14:36 +02:00
Mathieu Othacehe 38d7e6d6b7
gnu: xdg-desktop-portal: Update to 1.14.4.
* gnu/packages/freedesktop.scm (xdg-desktop-portal): Update to 1.14.4.
[inputs]: Add gdk-pixbuf, use fuse@3.
[arguments]: Build without systemd, set HOME variable.
2022-06-20 12:14:35 +02:00
Ludovic Courtès 73761d8049
gnu: lxd: Remove input labels.
* gnu/packages/virtualization.scm (lxd)[arguments]: In 'install' phase,
refer to "bash-minimal" instead of "bash".
[inputs]: Remove labels.
2022-06-19 23:14:57 +02:00
Brian Cully dbe221a89a
gnu: lxd: Add ‘attr’ to inputs and use it in wrapper.
Fixes issue with lxd crashing on startup with:

  Error: exec: "setfattr": executable file not found in $PATH

* gnu/packages/virtualization.scm (lxd)[arguments]: In 'install' phase,
add "attr" to the list of packages used in 'wrap-program'.
[inputs]: Add ATTR.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-19 23:14:56 +02:00
Philip McGrath d5a9f2a404
gnu: Add cctools.
* gnu/packages/darwin.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/darwin.scm (cctools): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-19 23:14:56 +02:00
Andreas Enge a050044255
gnu: Add texlive-floatflt.
* gnu/packages/tex.scm (texlive-floatflt): New variable.
2022-06-19 21:19:59 +02:00
Artyom V. Poptsov 0d461393e4
gnu: Add maven-doxia-sink-api.
* gnu/packages/maven.scm (maven-doxia-sink-api): New variable.
(maven-doxia-parent-pom): New private variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2022-06-19 21:01:13 +02:00
Tobias Geerinckx-Rice 7f1cb1ebca
gnu: barrier: Fix source hash.
The previous hash matches that of ‘guix hash -rx .’ on a pristine v2.4.0
checkout — without any submodules.  We clone recursive?ly, so update the
hash to include them.

Closes <https://issues.guix.gnu.org/56091>.

* gnu/packages/barrier.scm (barrier)[source]: Fix hash.

Reported by Vishakh Kumar <grokkingstuff@gmail.com>.
2022-06-12 02:00:00 +02:00
Efraim Flashner 1e3046810a
gnu: python-numpy: Skip 2 more tests on riscv64-linux.
* gnu/packages/python-xyz.scm (python-numpy)[arguments]: Adjust custom
'check phase to skip two more tests when building for riscv64-linux.
2022-06-19 16:18:40 +03:00
Pierre Neidhardt 77db24ff5b
gnu: sbcl-nfiles: Update to 0.4.2.
* gnu/packages/lisp-xyz.scm (sbcl-nfiles): Update to 0.4.2.
2022-06-19 12:30:26 +02:00
Pierre Neidhardt e264e25038
gnu: sbcl-cl-webkit: Update to 3.5.3.
* gnu/packages/lisp-xyz.scm (sbcl-cl-webkit): Update to 3.5.3.
2022-06-19 12:07:04 +02:00
Pierre Neidhardt 3cc5ffd3f1
gnu: sbcl-cmd: Update to 20220616.
* gnu/packages/lisp-xyz.scm (sbcl-cmd): Update to 20220616.
2022-06-19 11:56:47 +02:00
Pierre Neidhardt df77caf925
gnu: emacs-lispy: Update to 20220209.
* gnu/packages/emacs-xyz.scm (emacs-lispy): Update to 20220209.
2022-06-19 11:53:01 +02:00
Artyom V. Poptsov 3f8bb2d6b9
gnu: Add java-asm-commons.
* gnu/packages/java.scm (java-asm-commons-8): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2022-06-18 21:14:53 +02:00
Vinicius Monego b2f2fdb37e
gnu: orange: Update to 3.32.0.
* gnu/packages/orange.scm (orange): Update to 3.32.0.
2022-06-18 13:07:10 -03:00
Vinicius Monego b7ebf26036
gnu: freecad: Update to 0.20.
* gnu/packages/engineering.scm (freecad): Update to 0.20.
2022-06-18 13:07:10 -03:00
Vinicius Monego ea6738c74f
gnu: gimp: Update to 2.10.32.
* gnu/packages/gimp.scm (gimp): Update to 2.10.32.
2022-06-18 13:07:10 -03:00
Vinicius Monego 0d7d5a05c7
gnu: gegl: Update to 0.4.36.
* gnu/packages/gimp.scm (gegl): Update to 0.4.36.
2022-06-18 13:07:10 -03:00
Vinicius Monego f7882f7b75
gnu: babl: Update to 0.1.92.
* gnu/packages/gimp.scm (babl): Update to 0.1.92.
2022-06-18 13:07:10 -03:00
Vinicius Monego dc5a73b606
gnu: photoflare: Update to 1.6.10.
* gnu/packages/photo.scm (photoflare): Update to 1.6.10.
2022-06-18 13:07:09 -03:00
Vinicius Monego aa718586fa
gnu: python-scikit-image: Update to 0.19.3.
* gnu/packages/python-science.scm (python-scikit-image): Update to 0.19.3.
2022-06-18 13:07:09 -03:00
Vinicius Monego cebe0f127f
gnu: openxr: Update to 1.0.23.
* gnu/packages/graphics.scm (openxr): Update to 1.0.23.
2022-06-18 13:07:09 -03:00
Vinicius Monego fbf69d1c08
gnu: gthumb: Update to 3.12.2.
* gnu/packages/gnome.scm (gthumb): Update to 3.12.2.
2022-06-18 13:07:09 -03:00
Vinicius Monego 22f71351ea
gnu: markets: Update to 0.5.4.
* gnu/packages/gnome-xyz.scm (markets): Update to 0.5.4.
2022-06-18 13:07:09 -03:00
Vinicius Monego 321f445bd1
gnu: srain: Update to 1.4.0.
* gnu/packages/irc.scm (srain): Update to 1.4.0.
2022-06-18 13:07:09 -03:00
Vinicius Monego f91797b1e5
gnu: muse-sequencer: Use Gexps.
* gnu/packages/music.scm (muse-sequencer)[arguments]: Use Gexps.
2022-06-18 13:06:45 -03:00
Vinicius Monego e2de652d57
gnu: muse-sequencer: Update to 4.1.0.
* gnu/packages/music.scm (muse-sequencer): Update to 4.1.0.
2022-06-18 13:06:41 -03:00
Julien Lepiller 85d7ad2be8
gnu: ocaml-ezjsonm: Update to 1.3.0.
* gnu/packages/ocaml.scm (ocaml-ezjsonm): Update to 1.3.0.
2022-06-18 13:15:22 +02:00
Julien Lepiller 0bf2cf1351
gnu: Add ocaml-ezjsonm.
* gnu/packages/ocaml.scm (ocaml4.07-ezjsonm): Rename to...
(ocaml-ezjsonm): ...this.  Use latest ocaml version.
2022-06-18 13:15:21 +02:00
Julien Lepiller 7b615e3e6c
gnu: Add ocaml-piqi.
* gnu/packages/ocaml.scm (ocaml4.07-piqi): Rename to...
(ocaml-piqi): ...this.  Use latest ocaml.
2022-06-18 13:15:21 +02:00
Julien Lepiller 4a94cfbe4d
gnu: Add ocaml-piqilib.
* gnu/packages/ocaml.scm (ocaml4.07-piqilib): Rename to...
(ocaml-piqilib): ...this.  Use latest ocaml version.
2022-06-18 13:15:21 +02:00
Julien Lepiller 0133c000c9
gnu: ocaml-sexplib0: Update to 0.15.1.
* gnu/packages/ocaml.scm (ocaml-sexplib0): Update to 0.15.1.
2022-06-18 13:15:20 +02:00
Julien Lepiller 3cd53fc08f
gnu: omake: Update to 0.10.5.
* gnu/packages/ocaml.scm (omake): Update to 0.10.5.
* gnu/packages/patches/omake-fix-non-determinism.patch: Adjust for new
  version.
2022-06-18 13:15:20 +02:00
Julien Lepiller 773837bfd2
gnu: ocaml-easy-format: Update to 1.3.4.
* gnu/packages/ocaml.scm (ocaml-easy-format): Update to 1.3.4.
2022-06-18 13:15:19 +02:00
Julien Lepiller fcb23bf406
gnu: ocamlformat: Update to 0.22.4.
* gnu/packages/ocaml.scm (ocamlformat): Update to 0.22.4.
2022-06-18 13:15:19 +02:00
Julien Lepiller f25033d9ea
gnu: ocaml-tsdl: Update to 0.9.9.
* gnu/packages/ocaml.scm (ocaml-tsdl): Update to 0.9.9.
2022-06-18 13:15:18 +02:00
Julien Lepiller ad91e2a010
gnu: ocaml-utop: Update to 2.9.2.
* gnu/packages/ocaml.scm (ocaml-utop): Update to 2.9.2.
2022-06-18 13:15:17 +02:00
Julien Lepiller a24dbd25eb
gnu: coq: Update to 8.15.2.
* gnu/packages/coq.scm (coq-core): Update to 8.15.2.
2022-06-18 13:15:09 +02:00
Wiktor Żelazny eb5df275ce
gnu: Add r-gghalves.
* gnu/packages/cran.scm (r-gghalves): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2022-06-18 10:51:12 +02:00
Leo Famulari 3154b58256
gnu: linux-libre 4.9: Update to 4.9.318.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.318.
(linux-libre-4.9-pristine-source): Update hash.
2022-06-17 18:56:59 -04:00
Leo Famulari d1d4d96f21
gnu: linux-libre 4.14: Update to 4.14.283.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.283.
(linux-libre-4.14-pristine-source): Update hash.
2022-06-17 18:56:58 -04:00
Leo Famulari 5db786663d
gnu: linux-libre 4.19: Update to 4.19.247.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.247.
(linux-libre-4.19-pristine-source): Update hash.
2022-06-17 18:56:58 -04:00
Leo Famulari f5d216f21e
gnu: linux-libre 5.4: Update to 5.4.198.
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.198.
(linux-libre-5.4-pristine-source): Update hash.
2022-06-17 18:56:58 -04:00
Leo Famulari f0af475b7e
gnu: linux-libre 5.10: Update to 5.10.122.
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.122.
(linux-libre-5.10-pristine-source): Update hash.
2022-06-17 18:56:58 -04:00
Leo Famulari bd601a68b8
gnu: linux-libre 5.15: Update to 5.15.47.
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.47.
(linux-libre-5.15-pristine-source): Update hash.
2022-06-17 18:56:57 -04:00
Leo Famulari a59b981d0d
gnu: linux-libre: Update to 5.17.15.
* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.15.
(linux-libre-5.17-pristine-source): Update hash.
2022-06-17 18:56:50 -04:00
Ludovic Courtès 7f208f68de
home: Add OpenSSH service.
* gnu/home/services/ssh.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* po/guix/POTFILES.in: Add it.
* doc/guix.texi (Secure Shell): New section.
2022-06-17 23:39:32 +02:00
( 3e24393e87
gnu: pinfo: Update to 3d76eec.
* gnu/packages/texinfo.scm (pinfo): Update to commit
3d76eecde211e41ccc28b04e229f159b3f924399.
[arguments]: Use gexps.
[inputs, native-inputs]: Remove labels.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 23:39:32 +02:00
Antero Mejr 0de3d44a16
gnu: Add guile-termios.
* gnu/packages/guile-xyz.scm (guile-termios): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 23:39:32 +02:00
Antero Mejr e56f2cab60
gnu: Add guile-tap.
* gnu/packages/guile-xyz.scm (guile-tap): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 23:39:32 +02:00
Tobias Geerinckx-Rice 6013f80810
gnu: tor: Update to 0.4.7.8 [fixes CVE-2022-33903].
* gnu/packages/tor.scm (tor): Update to 0.4.7.8.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice b9d309114b
gnu: fdm: Edit description.
* gnu/packages/mail.scm (fdm)[synopsis]: Use @acronym{}.
[description]: Expand based on the README.
2022-06-12 02:00:01 +02:00
Tobias Geerinckx-Rice 37e64eed03
gnu: fdm: Update to 2.1.
* gnu/packages/mail.scm (fdm): Update to 2.1.
2022-06-12 02:00:01 +02:00
Tobias Geerinckx-Rice 9cc2fe90e8
gnu: rng-tools: Update to 6.15.
* gnu/packages/linux.scm (rng-tools): Update to 6.15.
[arguments]: Add a 'disable-failing-test phase.
2022-06-12 02:00:01 +02:00
Tobias Geerinckx-Rice 6ea3bb6a54
gnu: btrfs-progs: Use @acronym in description.
* gnu/packages/linux.scm (btrfs-progs)[description]: Use @acronym{}.
2022-06-12 02:00:01 +02:00
Tobias Geerinckx-Rice ffbe69c4c3
gnu: btrfs-progs: Fix tests.
* gnu/packages/linux.scm (btrfs-progs)[native-inputs]: Add libaio,
liburing, and util-linux.
2022-06-12 02:00:01 +02:00
Tobias Geerinckx-Rice f89822cd25
gnu: btrfs-progs: Update to 5.18.1.
* gnu/packages/linux.scm (btrfs-progs): Update to 5.18.1.
[native-inputs]: Remove asciidoc, python, xmlto, libxml2, and
docbook-xsl.  Add python-sphinx.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice e1076e9346
gnu: duktape: Cross-compile.
* gnu/packages/javascript.scm (duktape)[arguments]: Use CC-FOR-TARGET.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 2c975efe83
gnu: duktape: Use G-expressions.
* gnu/packages/javascript.scm (duktape)[arguments]:
Rewrite as G-expressions.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 9305d17609
gnu: erofs-utils: Update to 1.5.
* gnu/packages/linux.scm (erofs-utils): Update to 1.5.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice b5dc5f469c
gnu: i3status: Update to 2.14.
* gnu/packages/wm.scm (i3status): Update to 2.14.
[source]: Add snippet to delete pregenerated man page.
[build-system]: Switch to Meson.
[arguments]: Remove autotools-specific #:out-of-source?  Build man pages.
[inputs]: Remove unused openlibm and libcap.
[native-inputs]: Add perl.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 1a2a209e62
gnu: i3status: Make asciidoc a native input.
* gnu/packages/wm.scm (i3status)[inputs]: Move asciidoc from here…
[native-inputs]: …to here.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 743204bb04
gnu: brltty: Update to 6.5.
* gnu/packages/accessibility.scm (brltty): Update to 6.5.
2022-06-12 02:00:00 +02:00
Ricardo Wurmus 793ce82c9d
gnu: Add texlive-xunicode.
* gnu/packages/tex.scm (texlive-xunicode): New variable.
2022-06-17 21:09:25 +02:00
Andreas Enge 25d32d1f76
gnu: pari-gp: Enable pthreads.
* gnu/packages/algebra.scm (pari-gp): Add --mt=pthread to configure flags.
2022-06-17 19:54:46 +02:00
Liliana Marie Prikler f7d66e41f8
gnu: renpy: Use new style.
* gnu/packages/game-development.scm (renpy)[arguments]: Change to list of
G-Expressions.
[inputs]: Drop labels.
[native-inputs, outputs]: Squash to single line.
2022-06-17 18:49:06 +02:00
Liliana Marie Prikler 6c04a8961f
gnu: renpy: Update to 7.99.99-0-3e854bc.
* gnu/packages/aux-files/renpy/renpy.in (__renpy_files, path_to_gamedir):
New procedures.
* gnu/packages/game-development.scm (python-renpy): Update to
7.99.99-0-3e854bc.
(renpy): Likewise.
[inputs]: Add python-pefile, python-requests and python-six.
2022-06-17 18:49:05 +02:00
Liliana Marie Prikler 62a7455107
gnu: python-pygame-sdl2: Update to 2.1.0-0-1705c6e.
* gnu/packages/game-development.scm (python-pygame-sdl2): Update to
2.1.0-0-1705c6e.
2022-06-17 18:49:05 +02:00
Liliana Marie Prikler 82cff40a9c
gnu: Add python-pefile.
* gnu/packages/python-xyz.scm (python-pefile): New variable.
2022-06-17 18:49:05 +02:00
Liliana Marie Prikler 8e19e3a333
gnu: Add back the distinction between python-renpy and renpy.
This partially reverts commit 9f1bd63fb5.
Note, that with this patch renpy fails to build due to incompatibilities with
Python 3.

* gnu/packages/game-development.scm (renpy): Split into ‘python-renpy’ for the
python modules and ‘renpy’ for the games and binaries.
2022-06-17 18:49:04 +02:00
Jean-Pierre De Jesus DIAZ d18f701aa1
gnu: Add python-pysdl2.
* gnu/packages/python-xyz.scm (python-pysdl2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 15:31:34 +02:00
Peter Polidoro 88f6776728
gnu: teensy-loader-cli: Update to 2.2.
* gnu/packages/flashing-tools.scm (teensy-loader-cli): Update to 2.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 15:31:33 +02:00
Josselin Poiret 2ec85ed405
gnu: python-acme: Add python-chardet to propagated-inputs.
* gnu/packages/tls.scm (python-acme)[propagated-inputs]: Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 15:31:33 +02:00
Thiago Jung Bauermann 861108ca6a
gnu: public-inbox: Fixes to allow the testsuite to run
This patch makes the public-inbox testsuite pass. Some tests are skipped,
so the test coverage could likely be increased with more massaging.

Perhaps the most significant change is using tini to run the testsuite so
that the testsuite's sub-processes are reaped. The ‘check’ phase is based on
the one from the mutter package. Thanks to Maxim Cournoyer for pointing out
this solution.

* gnu/packages/patches/public-inbox-fix-spawn-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patch.
* gnu/packages/mail.scm (public-inbox)[source]: Add new patch.
[arguments]<#:tests?>: Remove argument.
<#:imported-modules>: Add argument.
<#:modules>: Likewise.
<#:phases>{qualify-paths}: Substitute path for ‘/bin/cp’.
{pre-check}: Don't skip httpd-unix.t test.  Remove unnecessary path
substitutions for “env” and “/bin/sh”.
{check}: Replace with custom version that launches the tests under tini.
[native-inputs]: Add tini.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-17 15:31:33 +02:00
Ludovic Courtès 37d5bd0b31
gnu: Add texlive-inriafonts.
* gnu/packages/tex.scm (texlive-inriafonts): New variable.
2022-06-17 15:31:33 +02:00
Ludovic Courtès df5e07c16d
gnu: Add texlive-fmtcount.
* gnu/packages/tex.scm (texlive-fmtcount): New variable.
2022-06-17 15:31:33 +02:00
muradm d6bd483cd5
gnu: tests: Add seatd/greetd based minimal desktop system tests.
* gnu/tests/desktop.scm (minimal-desktop): seatd/greetd based
minimal desktop test

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:44 +02:00
muradm d6dda325c1
gnu: desktop: Add seatd-service-type.
* gnu/services/desktop.scm (seatd-service-type): New variable
* gnu/services/desktop.scm (seatd-configuration): New data type

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:43 +02:00
muradm 167b8f29b3
gnu: admin: Add libseat 0.8.0 and move seatd.
* gnu/packages/admin.scm (libseat): New variable
* gnu/packages/admin.scm (seatd): New variable
* gnu/packages/freedesktop.scm (seatd): Remove variable
* gnu/packages/wm.scm (wlroots): Replace seatd input with libseat

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:42 +02:00
muradm 530e0f0260
gnu: base: Add greetd-service-type.
* gnu/services/base.scm (greetd-service-type): New variable
* gnu/services/base.scm (greetd-configuration): New data type
* gnu/services/base.scm (greetd-terminal-configuration): New data type
* gnu/services/base.scm (greetd-agreety-session): New data type
* gnu/services/base.scm (pam-limits-service-type): Should be aware of
greetd PAM service
* gnu/services/pam-mount.scm (pam-mount-pam-service): Should be aware
of greetd PAM service

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:41 +02:00
muradm 32ca068cb9
gnu: admin: Add greetd-pam-mount.
* gnu/packages/admin.scm (greetd-pam-mount): New variable

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:40 +02:00
muradm c08d56a161
gnu: admin: Add greetd 0.8.0.
* gnu/packages/admin.scm (greetd): New variable

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:39 +02:00
muradm 7943f9f170
gnu: crates-io: Add rust-pam-sys 0.5.6.
* gnu/packages/crates-io.scm (rust-pam-sys-0.5): New variable

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:38 +02:00
muradm 7f7a075c3d
gnu: crates-io: Add rust-enquote 1.1.0.
* gnu/packages/crates-io.scm (rust-enquote-1): New variable

Signed-off-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>
2022-06-17 10:30:36 +02:00
Maxim Cournoyer 6fc33d91ba
gnu: dropbear: Build with X11 forwarding support.
* gnu/packages/ssh.scm (dropbear)[phases]
{enable-x11-forwarding}: New phase.
2022-06-16 21:52:49 -04:00
Maxim Cournoyer bf9c98b11d
gnu: dropbear: Update to 2022.82.
* gnu/packages/ssh.scm (dropbear): Update to 2022.82.
[source]: Delete origin snippet's trailing #t.
[arguments]: Use gexps.
[tests?]: Update comment.
2022-06-16 21:52:49 -04:00
Maxim Cournoyer 1589debbd9
gnu: ovmf: Use gexps.
* gnu/packages/firmware.scm (edk2-commit, edk2-version)
(edk2-origin): Delete variables.
(ovmf)[source]: Define here; it's the only user of it so far.
[native-inputs]: Move below arguments.
[phases]: Use gexps.  Delete trailing #t.
{patch-source}: New phase.
{configure}: Use 'invoke' to execute the 'edksetup.sh' script; delete
associated FIXME comment.
(ovmf-aarch64, ovmf-arm): Adjust accordingly.
2022-06-16 21:52:49 -04:00
Petr Hodina a88de093fb
gnu: hcxtools: Update to 6.2.7.
* gnu/packages/networking.scm (hcxtools): Update to 6.2.7.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 23:57:41 +02:00
Petr Hodina 9317cb3e9c
gnu: hcxtools: Use gexps.
* gnu/packages/networking.scm (hcxtools)[arguments]: Link libraries and
use PREFIX instead of INSTALL_DIR.
[phases]: Use gexps.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 23:57:41 +02:00
Efraim Flashner ab82dd3f58
gnu: llvm-9: Fix building on riscv64-linux.
* gnu/packages/llvm.scm (llvm-12)[arguments]: Add a phase to update
config.guess when config is one of the native-inputs.
(llvm-10)[native-inputs]: Add config when building for riscv64-linux and
the llvm version is less than 11.
2022-06-16 19:42:02 +03:00
Efraim Flashner 3c7736f745
gnu: polkit-qt: Update to 1-0.114.0.
* gnu/packages/polkit.scm (polkit-qt): Update to 1-0.114.0.
[source]: Update to new source URI.
2022-06-16 17:57:34 +03:00
Ricardo Wurmus f700223c3b
gnu: Add pyscenic.
* gnu/packages/bioinformatics.scm (pyscenic): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus 3535d8dc5a
gnu: Add python-arboreto.
* gnu/packages/bioinformatics.scm (python-arboreto): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus fbe5707b73
gnu: Add python-ctxcore.
* gnu/packages/bioinformatics.scm (python-ctxcore): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus d62dbedd6d
gnu: Add python-bokeh.
* gnu/packages/python-xyz.scm (python-bokeh): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus 21e9e67c77
gnu: Add python-multiprocessing-on-dill.
* gnu/packages/python-xyz.scm (python-multiprocessing-on-dill): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus 62c5121472
gnu: Add python-interlap.
* gnu/packages/python-xyz.scm (python-interlap): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus e4dbf938ea
gnu: python-locket: Update to 1.0.0.
* gnu/packages/python-xyz.scm (python-locket): Update to 1.0.0.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus a3613f11d5
gnu: Add python-pyarrow-0.16.
* gnu/packages/databases.scm (python-pyarrow-0.16): New variable.
2022-06-16 15:20:59 +02:00
Ricardo Wurmus c8727617e5
gnu: Add apache-arrow-0.16.
* gnu/packages/databases.scm (apache-arrow-0.16): New variable.
2022-06-16 15:20:59 +02:00
Paul A. Patience 59ec9e3f3e
gnu: Add cl-policy-cond.
* gnu/packages/lisp-xyz.scm (sbcl-policy-cond, cl-policy-cond,
  ecl-policy-cond): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-16 14:56:16 +02:00
John Kehayias 67c30ff8ad
gnu: rocm: Update to 5.1.3.
All packages updated at the same time as they have a shared version. rocclr is
no longer a stand-alone package, so the previous version is kept as rocclr-4
and the current version is just the source, rocclr-src, needed by rocm-opencl-runtime.

* gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch,
gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: Update patches.
* gnu/packages/rocm.scm (rocm-cmake, rocm-device-libs, rocm-comgr,
roct-thunk-interface, rocr-runtime, rocm-opencl-runtime, rocminfo,
rocm-bandwidth-test): Update to 5.1.3.
(roct-thunk-interface)[inputs]: Add libdrm.
[native-inputs]: Add gcc:lib and pkg-config.
(rocclr-src): New variable.
(rocclr-4): New variable (previous version of the package).
(rocm-opencl-runtime)[source]: Remove obsolete patches.
[arguments]: Rewrite with gexps. Add needed #:configure-flags.
[inputs]: Remove rocclr, add numactl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 12:50:06 +02:00
John Kehayias 25809f5a40
gnu: Update llvm-for-rocm: Update to 5.1.3.
* gnu/packages/llvm.scm (llvm-for-rocm): Update to 5.1.3, now based on llvm-14.
[source]{patches}: Remove unneeded patches (add_Object and add_libraries) and add new one (linkdl).
* gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch,
gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: Delete files.
* gnu/packages/patches/llvm-roc-5.0.0-linkdl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update to match current patches.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 12:50:06 +02:00
David Wilson 677ae314f6
gnu: herbstluftwm: Update to 0.9.4.
* gnu/packages/wm.scm (herbstluftwm): Update to 0.9.4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 12:50:06 +02:00
Artyom V. Poptsov c48c69cfa3
gnu: libtree: Update to 3.1.1.
* gnu/packages/linux.scm (libtree): Update to 3.1.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-16 12:50:05 +02:00
Guillaume Le Vaillant ef2d908e22
gnu: getmail6: Update to 6.18.9.
* gnu/packages/mail.scm (getmail6): Update to 6.18.9.
  [description]: Fix typo.
2022-06-16 10:25:13 +02:00
Vinicius Monego 5d28f089ef
gnu: Add python-zeep.
* gnu/packages/python-web.scm (python-zeep): New variable.
* gnu/packages/patches/python-zeep-Fix-pytest_httpx-test-cases.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
2022-06-16 09:25:55 +02:00
Hartmut Goebel 9ee6d9cb17
gnu: Add python-pytest-httpx.
* gnu/packages/python-check.scm (python-pytest-httpx): New variable.
2022-06-16 09:25:55 +02:00
Vinicius Monego 2950ef2fff
gnu: Add python-flake8-blind-except.
* gnu/packages/python-xyz.scm (python-flake8-blind-except): New variable.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
2022-06-16 09:25:55 +02:00
Vinicius Monego 7a8beb3dea
gnu: python-requests-file: Update to 1.5.1.
* gnu/packages/python-xyz.scm (python-requests-file): Update to 1.5.1.
[source]: Make some cosmetic changes.
[arguments]<#:phases>: Override 'check phase.
[home-page]: Don't break line.
2022-06-16 09:25:55 +02:00
Vinicius Monego e0b6cd0947
gnu: Add python-flake8-debugger.
* gnu/packages/python-xyz.scm (python-flake8-debugger): New variable.
2022-06-16 09:25:55 +02:00
Ludovic Courtès 128697d43c
gnu: wayland-protocols: Add 'release-monitoring-url' property.
* gnu/packages/freedesktop.scm (wayland-protocols)[properties]: New
field.
2022-06-15 23:49:24 +02:00
Efraim Flashner 0929657ec6
gnu: eigen: Honor the #:tests? flag.
* gnu/packages/algebra.scm (eigen)[arguments]: Adjust the custom 'check
phase to honor the #:tests? flag.
2022-06-15 21:54:35 +03:00
Clément Lassieur 673983c9c6
gnu: emacs-lsp-mode: Update to 8.0.1-0.4aafe25.
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): Update to 8.0.1-0.4aafe25.
[arguments]: Add a 'fix-patch-el-files' phase.
2022-06-15 15:39:50 +02:00
Tobias Geerinckx-Rice a431d1dbc5
gnu: bind: Update to 9.16.30.
* gnu/packages/dns.scm (isc-bind): Update to 9.16.30.
2022-06-12 02:00:00 +02:00
Hartmut Goebel 9cccf6490d
gnu: Add rebar3-proper.
* gnu/packages/erlang.scm (rebar3-proper): New variable.
2022-06-15 10:58:10 +02:00
Hartmut Goebel ffc18b87f9
gnu: Add rebar3-git-vsn.
* gnu/packages/erlang.scm (rebar3-git-vsn): New variable.
2022-06-15 10:58:09 +02:00
Hartmut Goebel 1e6d64c2dc
gnu: Add rebar3-raw-deps.
* gnu/packages/erlang.scm (rebar3-raw-deps): New variable.
2022-06-15 10:58:09 +02:00
Hartmut Goebel 00eea05ab8
gnu: Add rebar3.
* gnu/packages/erlang.scm (rebar3): New variable.
2022-06-15 10:58:08 +02:00
Hartmut Goebel 0018a4788b
gnu: Add erlang-covertool.
* gnu/packages/erlang.scm (erlang-covertool): New variable.
2022-06-15 10:58:08 +02:00
Hartmut Goebel eb8c8ba11f
gnu: Add erlang-proper.
* gnu/packages/erlang.scm (erlang-proper): New variable.
2022-06-15 10:18:49 +02:00
Hartmut Goebel d723e8d94b
gnu: Add erlang-jsone.
* gnu/packages/erlang.scm (erlang-jsone): New variable.
2022-06-15 10:18:48 +02:00
Hartmut Goebel e0376bc8a4
gnu: Add erlang-edown.
* gnu/packages/erlang.scm (erlang-edown): New variable.
2022-06-15 10:18:48 +02:00
Hartmut Goebel 4af9fa1130
gnu: Add erlang-relx.
* gnu/packages/erlang.scm (erlang-relx): New variable.
2022-06-15 10:18:48 +02:00
Hartmut Goebel 539695e9d5
gnu: Add erlang-ssl-verify-fun.
* gnu/packages/erlang.scm (erlang-ssl-verify-fun): New variable.
2022-06-15 10:18:47 +02:00
Hartmut Goebel 2b474f45c1
gnu: Add erlang-hex-core.
* gnu/packages/erlang.scm (erlang-hex-core): New variable.
2022-06-15 10:18:46 +02:00
Hartmut Goebel 8680f3fbb7
gnu: Add erlang-parse-trans.
* gnu/packages/erlang.scm (erlang-parse-trans): New variable.
2022-06-15 10:18:46 +02:00
Hartmut Goebel 0e6f4572c1
gnu: Add erlang-providers.
* gnu/packages/erlang.scm (erlang-providers): New variable.
2022-06-15 10:18:45 +02:00
Hartmut Goebel 6cec25f232
gnu: Add erlang-eunit-formatters.
* gnu/packages/erlang.scm (erlang-eunit-formatters): New variable.
2022-06-15 10:18:45 +02:00
Hartmut Goebel a6b7caa190
gnu: Add erlang-getopt.
* gnu/packages/erlang.scm (erlang-getopt): New variable.
2022-06-15 10:18:44 +02:00
Hartmut Goebel d146de283b
gnu: Add erlang-bbmustache.
* gnu/packages/erlang.scm (erlang-bbmustache): New variable.
2022-06-15 10:18:44 +02:00
Hartmut Goebel bb4546defd
gnu: Add erlang-cth-readable.
* gnu/packages/erlang.scm (erlang-cth-readable): New variable.
2022-06-15 10:18:44 +02:00
Hartmut Goebel a6a1e4b9f4
gnu: Add erlang-erlware-commons.
* gnu/packages/erlang.scm (erlang-erlware-commons): New variable.
2022-06-15 10:18:43 +02:00
Hartmut Goebel b5c81fb289
gnu: Add erlang-certifi.
* gnu/packages/erlang.scm (erlang-certifi): New variable.
2022-06-15 10:18:43 +02:00
Hartmut Goebel 922588402e
gnu: Add erlang-cf.
* gnu/packages/erlang.scm (erlang-cf): New variable.
2022-06-15 10:18:42 +02:00
Ludovic Courtès 8a04ac4b2f
gnu: slurm: Update to 22.05.1.
* gnu/packages/parallel.scm (slurm): Update to 22.05.1.
(slurm-21.08): New variable.
2022-06-15 00:25:22 +02:00
Petr Hodina 887b23a73c
gnu: Add kismet.
* gnu/packages/networking.scm (kismet): New variable.
* gnu/local.mk: Add patch.
* gnu/packages/patches/kismet-unbundle-boost.patch: New file.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:22 +02:00
Petr Hodina e51517d077
gnu: libwesockets: Update license.
* gnu/packages/web.scm (libwebsockets)[license]: Change to expat.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:22 +02:00
Alexandros Theodotou c363843349
gnu: rtmidi: Add version 5.0.0.
* gnu/packages/audio.scm (rtmidi): Update to 5.0.0.
(rtmidi-4.0): New variable.
* gnu/packages/music.scm (milkytracker)[inputs]: Use RTMIDI-4.0 rather
than RTMIDI.
(zrythm)[inputs]: Likewise.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:21 +02:00
Alexandros Theodotou d22bee814c
gnu: libadwaita: Update to 1.1.0.
* gnu/packages/gnome.scm (libadwaita): Update to 1.1.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:21 +02:00
Olivier Dion 7735e8ed90
gnu: lttng-ust: Fix dependencies.
* gnu/packages/instrumentation.scm (lttng-ust): Fix dependencies.
[inputs]: Remove liburcu.
[propagated-inputs]: Add liburcu.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:21 +02:00
Attila Lendvai 8cb1a49a39
services: configuration: Use *unspecified* instead of 'disabled.
Use *unspecified* as a marker for field values that have not been set.

Rationale: 'disabled may easily clash with user values for boolean fields, is
confusing (i.e. its meaning is *not* boolean false, but unspecified) and it
also passes silently through the symbol? predicate of a field of type symbol.

* gnu/services/configuration.scm (configuration-missing-default-value):
Renamed from configuration-no-default-value.
(define-maybe-helper): Use *unspecified* instead of 'disabled, and make
the default value optional.
* gnu/home/services/desktop.scm (home-redshift-configuration):
Change (maybe-xyz 'disabled) to maybe-xyz.
* gnu/services/authentication.scm (nslcd-configuration): Likewise.
* gnu/services/cgit.scm (repository-cgit-configuration): Likewise.
* gnu/services/file-sharing.scm (serialize-maybe-string)
(serialize-maybe-file-object): Use 'unspecified?' instead of (eq? val
'disabled).
* gnu/services/messaging.scm (raw-content?): Likewise.
(ssl-configuration): Change (maybe-xyz 'disabled) to maybe-xyz.
(prosody-configuration): Likewise.
* gnu/services/file-sharing.scm (transmission-daemon-configuration):
Likewise.
* gnu/services/messaging.scm (define-all-configurations):
Use *unspecified* instead of 'disabled'.
* gnu/services/networking.scm (opendht-configuration): Likewise.
* gnu/services/pm.scm (tlp-configuration): Likewise.
* gnu/services/telephony.scm (jami-account): Likewise.
(jami-configuration): Likewise.
* gnu/services/vpn.scm (openvpn-client-configuration): Likewise.
* tests/services/configuration.scm ("maybe type, no default")
("maybe type, with default"): New tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:21 +02:00
Attila Lendvai e11517052b
services: configuration: Support (field1 maybe-number "") format.
As opposed to explicitly using 'disabled as value, or using the
(field1 (maybe-number) "") format.

It's mostly the work of Maxime Devos shared under #54674, with some
modifications by Attila Lendvai.

* gnu/services/configuration.scm (normalize-field-type+def): New function.
(define-configuration-helper) (define-configuration): Support new field
format.
* tests/services/configuration.scm (config-with-maybe-number->string): New
function.
("maybe value serialization of the instance"): New test.
("maybe value serialization of the instance, unspecified"): New test.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-15 00:25:21 +02:00
Ludovic Courtès 7046e77721
system: <operating-system> compiler truly honors the 'system' argument.
Fixes <https://issues.guix.gnu.org/55951>.

* gnu/system.scm (operating-system-compiler): Parameterize
'%current-system' and '%current-target-system' before calling
'operating-system-derivation'.
* tests/system.scm ("lower-object, %current-system sensitivity"): New
test.
2022-06-15 00:25:20 +02:00
Marius Bakke 13c46cc29d
gnu: PostgreSQL: Promote version 14 to the default.
* gnu/packages/databases.scm (postgresql): Alias to POSTGRESQL-14.
* gnu/packages/qt.scm (qtbase-5)[inputs]: Stay on POSTGRESQL-13.
2022-06-14 23:33:54 +02:00
Marius Bakke bd16e7c32d
gnu: python-asyncpg: Update to 0.25.0.
* gnu/packages/databases.scm (python-asyncpg): Update to 0.25.0.
[native-inputs]: Remove PYTHON-FLAKE8, PYTHON-PYCODESTYLE, PYTHON-SPHINX,
PYTHON-SPHINX-RTD-THEME, and PYTHON-SPHINXCONTRIB-ASYNCIO.
2022-06-14 23:33:54 +02:00
Marius Bakke d51a097460
gnu: python-tortoise-orm: Update to 0.19.1.
* gnu/packages/databases.scm (python-tortoise-orm): Update to 0.19.1.
2022-06-14 23:33:53 +02:00
Marius Bakke 3f033b6d9e
gnu: python-pypika-tortoise: Update to 0.1.5.
* gnu/packages/databases.scm (python-pypika-tortoise): Update to 0.1.5.
2022-06-14 23:33:53 +02:00
Marius Bakke 9f1713f219
gnu: gplates: Update to 2.3.01-beta.3.
* gnu/packages/geo.scm (gplates): Update to 2.3.01-beta.3.
[source](uri): Adjust for beta releases.
[source](file-name): Adjust for zipball.
[native-inputs]: Add UNZIP.
[inputs]: Simplify.
2022-06-14 23:33:53 +02:00
Marius Bakke ec4515389a
gnu: perl-dbd-pg: Update to 3.15.1.
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.15.1.
2022-06-14 23:33:53 +02:00
Marius Bakke 334c849ba1
gnu: python-acme, certbot: Update to 1.28.0.
* gnu/packages/tls.scm (python-acme): Update to 1.28.0.
[arguments]: Override check phase.
(certbot)[source]: Update hash.
2022-06-14 23:33:53 +02:00
Marius Bakke 73e0063888
gnu: python-josepy: Update to 1.13.0.
* gnu/packages/python-crypto.scm (python-josepy): Update to 1.13.0.
[propagated-inputs]: Remove PYTHON-SIX.
2022-06-14 23:33:53 +02:00
Marius Bakke d73b88d826
gnu: TimescaleDB: Update to 2.7.0.
* gnu/packages/databases.scm (timescaledb): Update to 2.7.0.
[source](snippet): Remove more files.
[source](patches): New field.
* gnu/packages/patches/timescaledb-flaky-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2022-06-14 23:33:52 +02:00
Marius Bakke b98a61a8f8
gnu: ruby-pg: Update to 1.3.5.
* gnu/packages/ruby.scm (ruby-pg): Update to 1.3.5.
[home-page]: Change to current.
[source]: Switch to GIT-FETCH.
[arguments]: Add #:phases.
2022-06-14 23:33:52 +02:00
Marius Bakke 4601dccb36
gnu: PostgreSQL@13: Update replacement to 13.7 [fixes CVE-2022-1552].
* gnu/packages/databases.scm (postgresql-13/replacement): Update to 13.7.
2022-06-14 23:33:52 +02:00
Marius Bakke 3787f56734
gnu: PostgreSQL@10: Update to 10.21 [fixes CVE-2022-1552].
* gnu/packages/databases.scm (postgresql-10): Update to 10.21.
2022-06-14 23:33:52 +02:00
Marius Bakke a18f937b56
gnu: PostgreSQL@11: Update to 11.16 [fixes CVE-2022-1552].
* gnu/packages/databases.scm (postgresql-11): Update to 11.16.
2022-06-14 23:33:52 +02:00
Marius Bakke f4f31bb99c
gnu: PostgreSQL@14: Update to 14.3 [fixes CVE-2022-1552].
* gnu/packages/databases.scm (postgresql-14): Update to 14.3.
2022-06-14 23:33:51 +02:00
Marius Bakke e03b450c36
gnu: PostgreSQL: Permit loading plugins from symlink unions again.
...this fixes a regression since 49b350fafc where the patch to disable
symlink resolving went missing from versions < 14.

* gnu/packages/databases.scm (postgresql-13/replacement): New variable.
(postgresql-13)[replacement]: New field.
(postgresql-11)[source](patches): Add 'postgresql-disable-resolve_symlinks.patch'.
2022-06-14 23:33:51 +02:00
Greg Hogan 8e97491277
gnu: dos2unix: Update to 7.4.3.
* gnu/packages/textutils.scm (dos2unix): Update to 7.4.3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-06-12 02:00:00 +02:00
Greg Hogan 142d136abd
gnu: htop: Update to 3.2.1.
* gnu/packages/admin.scm (htop): Update to 3.2.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-06-12 02:00:00 +02:00
Greg Hogan ad05cb6a3c
gnu: ccache: Update to 4.6.1.
* gnu/packages/ccache.scm (ccache): Update to 4.6.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2022-06-12 02:00:00 +02:00
Maxim Cournoyer a860a5fa95
services: dbus: Add a VERBOSE? configuration option.
* gnu/services/dbus.scm (<dbus-configuration>)[verbose?]: New field.
(dbus-shepherd-service): Use it.
(dbus-service)[verbose?]: Add argument and update doc.
* doc/guix.texi (Desktop Services): Document it.
2022-06-14 14:23:21 -04:00
Maxim Cournoyer 3aaf52a129
gnu: Add dbus-verbose.
* gnu/packages/glib.scm (dbus-verbose): New variable.
2022-06-14 14:23:21 -04:00
Liliana Marie Prikler 330d2778a9
gnu: komikku: Update to 0.39.0.
* gnu/packages/gnome.scm (komikku): Update to 0.39.0.
2022-06-14 19:01:33 +02:00
Liliana Marie Prikler 391544a596
gnu: webkitgtk: Update to 2.36.3.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.36.3.
2022-06-14 19:01:29 +02:00
Maxim Cournoyer 3dd32e76b0
gnu: h-client: Fetch source from Savannah again.
* gnu/packages/hardware.scm (h-client)[source]: Update URL and associated
comment.
2022-06-14 11:56:03 -04:00
Guillaume Le Vaillant 99c43cf344
gnu: cl-fof: Update to 0.2.0-1.522879e.
* gnu/packages/lisp-xyz.scm (sbcl-fof): Update to 0.2.0-1.522879e.
  [inputs]: Sort inputs.
  [arguments]: Remove 'fix-build' phase.
2022-06-14 16:18:07 +02:00
Guillaume Le Vaillant d1f3bba66c
gnu: cl-dexador: Remove input labels.
* gnu/packages/lisp-xyz.scm (sbcl-dexador)[inputs, native-inputs]: Remove
  labels and sort inputs.
2022-06-14 15:54:09 +02:00
André A. Gomes 893fc788fb
gnu: cl-dexador: Update to 0.9.15-1.74a233e.
* gnu/packages/lisp-xyz.scm (sbcl-dexador): Update to 0.9.15-1.74a233e.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-14 15:53:20 +02:00
Guillaume Le Vaillant 0fd660a2b2
gnu: cl-fof: Fix build with recent cl-serapeum.
* gnu/packages/lisp-xyz.scm (sbcl-fof)[inputs]: Remove labels and add
  sbcl-named-readtables.
  [arguments]: Add 'fix-build' phase.
2022-06-14 15:38:21 +02:00
Paul A. Patience 50b6377bc4
gnu: cl-serapeum: Update to 0.0.0-7.d2150c6.
* gnu/packages/lisp-xyz.scm (sbcl-serapeum): Update to 0.0.0-7.d2150c6.
  [inputs]: Remove sbcl-named-readtables and sbcl-fare-quasiquote.
  Add sbcl-introspect-environment and sbcl-trivial-cltl2.
  [native-inputs]: Add sbcl-atomics.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-14 15:20:47 +02:00
Paul A. Patience f11b6ac9ac
gnu: cl-serapeum: Use G-expressions.
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[arguments]: Use G-expressions and
  simplify the 'disable-failing-tests' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-14 15:15:42 +02:00
Paul A. Patience 240ac3b75c
gnu: cl-serapeum: Remove input labels.
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[inputs, native-inputs]: Remove
  labels.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-06-14 15:14:24 +02:00
Arun Isaac 6f75565b4e
gnu: python-httpx: Update to 0.23.0.
* gnu/packages/python-web.scm (python-httpx): Update to 0.23.0.
2022-06-14 18:06:24 +05:30
Arun Isaac 2ac81f482a
gnu: python-httpcore: Update to 0.15.0.
* gnu/packages/python-web.scm (python-httpcore): Update to 0.15.0.
[arguments]: Override asyncio_mode when invoking pytest in check phase.
2022-06-14 18:06:20 +05:30
Tobias Geerinckx-Rice 2682b12ca4
gnu: dovecot: Update to 2.3.19.1.
* gnu/packages/mail.scm (dovecot): Update to 2.3.19.1.
2022-06-12 02:00:09 +02:00
Tobias Geerinckx-Rice e1b647fdf6
gnu: sudo: Update to 1.9.11p2.
* gnu/packages/admin.scm (sudo): Update to 1.9.11p2.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 88b098d9ba
gnu: python-parted: Rename to python-pyparted.
* gnu/packages/disk.scm (python-pyparted): New variable renamed from…
(python-parted): …this, to better follow the package naming guidelines.
Redefine it using DEPRECATED-PACKAGE.
2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice 67ff676792
gnu: python-parted: Update to 3.12.0.
* gnu/packages/disk.scm (python-parted): Update to 3.12.0.
[arguments]: Run the default 'check phase at the default time.
2022-06-12 02:00:00 +02:00
Vagrant Cascadian 824f2afcf0
gnu: autogen: Build reproducibly.
* gnu/packages/autogen.scm (autogen)[arguments]: Add
  'use-numeric-ids-in-tarball phase.
2022-06-13 20:56:47 -07:00
Vagrant Cascadian 3691e37eb1
gnu: autogen: Build with guile 3.0.
* gnu/packages/autogen.scm (autogen)[arguments]: Add 'support-guile-3.0 phase.
  [inputs]: Remove guile-2.2 and add guile-3.0.
2022-06-13 20:56:30 -07:00
Artyom V. Poptsov 4ff9f1689d
gnu: java-commons-lang3: Update to 3.12.0
* gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0.
* gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2022-06-13 22:49:13 +02:00
Andreas Enge f2ed82eb53
gnu: sollya: Update to 8.0.
* gnu/packages/algebra.scm (sollya): Update to 8.0.
2022-06-13 17:50:28 +02:00
Andreas Enge 89fefe2fd4
gnu: python-fpylll: Update to 0.5.7.
* gnu/packages/algebra.scm (python-fpylll): Update to 0.5.7.
  [source]: Revert from git to pypi.
2022-06-13 17:40:30 +02:00
Andreas Enge 5dec5f65ec
gnu: fplll: Update to 5.4.2.
* gnu/packages/algebra.scm (fplll): Update to 5.4.2.
[source]: Remove patch; for unknown reasons the package now compiles
without it.
* gnu/packages/patches/fplll-std-fenv.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.
2022-06-13 17:16:54 +02:00
Ricardo Wurmus 35124d0087
gnu: r-quantpsyc: Update to 1.6.
* gnu/packages/statistics.scm (r-quantpsyc): Update to 1.6.
[propagated-inputs]: Add r-dplyr and r-purrr.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus 789c7ab505
gnu: r-mnormt: Update to 2.1.0.
* gnu/packages/statistics.scm (r-mnormt): Update to 2.1.0.
[propagated-inputs]: Remove r-tmvnsim.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus 3d7adc9b21
gnu: r-flexmix: Update to 2.3-18.
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-18.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus 5fe57da316
gnu: r-r-oo: Update to 1.25.0.
* gnu/packages/statistics.scm (r-r-oo): Update to 1.25.0.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus ed945c7732
gnu: r-e1071: Update to 1.7-11.
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-11.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus 03aba54185
gnu: r-segmented: Update to 1.6-0.
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-0.
[propagated-inputs]: Add r-nlme.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus 944b4224e8
gnu: r-xml: Update to 3.99-0.10.
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.10.
2022-06-13 15:24:30 +02:00
Ricardo Wurmus 912792320a
gnu: r-rcurl: Update to 1.98-1.7.
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.7.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus ebcb0aa321
gnu: r-dbplyr: Update to 2.2.0.
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.2.0.
[propagated-inputs]: Remove r-ellipsis; add r-cli and r-pillar.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus e1297b31c1
gnu: r-sendmailr: Update to 1.2-1.1.
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.2-1.1.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus d7d62bcd61
gnu: r-zoom: Update to 2.0.6.
* gnu/packages/cran.scm (r-zoom): Update to 2.0.6.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus 23c6a87e5d
gnu: r-pkgdown: Update to 2.0.4.
* gnu/packages/cran.scm (r-pkgdown): Update to 2.0.4.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus b7b5e7d4f2
gnu: r-infer: Update to 1.0.2.
* gnu/packages/cran.scm (r-infer): Update to 1.0.2.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus fa3f80e44f
gnu: r-yardstick: Update to 1.0.0.
* gnu/packages/cran.scm (r-yardstick): Update to 1.0.0.
[propagated-inputs]: Remove r-proc; add r-hardhat.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus 839ec236e4
gnu: r-hardhat: Update to 1.1.0.
* gnu/packages/cran.scm (r-hardhat): Update to 1.1.0.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus 2e0e58863a
gnu: r-posterior: Update to 1.2.2.
* gnu/packages/cran.scm (r-posterior): Update to 1.2.2.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus 694eabcc17
gnu: r-rsconnect: Update to 0.8.26.
* gnu/packages/cran.scm (r-rsconnect): Update to 0.8.26.
2022-06-13 15:24:29 +02:00
Ricardo Wurmus bc0b78bf32
gnu: r-mi: Update to 1.1.
* gnu/packages/cran.scm (r-mi): Update to 1.1.
[native-inputs]: Add r-knitr.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 4cc33ce2b2
gnu: r-gghighlight: Update to 0.3.3.
* gnu/packages/cran.scm (r-gghighlight): Update to 0.3.3.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus ea5377a641
gnu: r-torch: Update to 0.8.0.
* gnu/packages/cran.scm (r-torch): Update to 0.8.0.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus e0a7f404eb
gnu: r-univoutl: Update to 0.4.
* gnu/packages/cran.scm (r-univoutl): Update to 0.4.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 17f70b7363
gnu: r-randtoolbox: Update to 2.0.1.
* gnu/packages/cran.scm (r-randtoolbox): Update to 2.0.1.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 2327b15d31
gnu: r-terra: Update to 1.5-34.
* gnu/packages/cran.scm (r-terra): Update to 1.5-34.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus f85842a8e2
gnu: r-aplot: Update to 0.1.6.
* gnu/packages/cran.scm (r-aplot): Update to 0.1.6.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 58ec67948c
gnu: r-kernlab: Update to 0.9-31.
* gnu/packages/cran.scm (r-kernlab): Update to 0.9-31.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus bee70949b9
gnu: r-haplo-stats: Update to 1.8.9.
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.8.9.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 1821a127e7
gnu: r-adegenet: Update to 2.1.7.
* gnu/packages/cran.scm (r-adegenet): Update to 2.1.7.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 3e38a5167d
gnu: r-classint: Update to 0.4-7.
* gnu/packages/cran.scm (r-classint): Update to 0.4-7.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 68c1510295
gnu: r-apcluster: Update to 1.4.10.
* gnu/packages/cran.scm (r-apcluster): Update to 1.4.10.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 0f94dd778c
gnu: r-parallelly: Update to 1.32.0.
* gnu/packages/cran.scm (r-parallelly): Update to 1.32.0.
2022-06-13 15:24:28 +02:00
Ricardo Wurmus 313c4234a0
gnu: r-rmpfr: Update to 0.8-9.
* gnu/packages/cran.scm (r-rmpfr): Update to 0.8-9.
2022-06-13 15:24:27 +02:00
Ricardo Wurmus cac7de2fc5
gnu: r-sodium: Update to 1.2.1.
* gnu/packages/cran.scm (r-sodium): Update to 1.2.1.
2022-06-13 15:24:27 +02:00
Ricardo Wurmus b3dca70aa1
gnu: r-admisc: Update to 0.28.
* gnu/packages/cran.scm (r-admisc): Update to 0.28.
2022-06-13 15:24:27 +02:00
Ricardo Wurmus 58e256383f
gnu: r-rgl: Update to 0.109.2.
* gnu/packages/cran.scm (r-rgl): Update to 0.109.2.
[propagated-inputs]: Add r-base64enc and r-mime.
[native-inputs]: Add r-rmarkdown.
2022-06-13 15:24:14 +02:00
Ricardo Wurmus 739a195622
gnu: r-flextable: Update to 0.7.2.
* gnu/packages/cran.scm (r-flextable): Update to 0.7.2.
2022-06-13 14:21:51 +02:00
Ricardo Wurmus 9d0ce9aaf4
gnu: r-officer: Update to 0.4.3.
* gnu/packages/cran.scm (r-officer): Update to 0.4.3.
2022-06-13 14:21:51 +02:00
Ricardo Wurmus 7edac5cd0a
gnu: r-rdpack: Update to 2.3.1.
* gnu/packages/cran.scm (r-rdpack): Update to 2.3.1.
2022-06-13 14:21:51 +02:00
Ricardo Wurmus ba881471ac
gnu: r-ellipse: Update to 0.4.3.
* gnu/packages/cran.scm (r-ellipse): Update to 0.4.3.
2022-06-13 14:21:50 +02:00
Ricardo Wurmus c3bbdd4a5b
gnu: r-sna: Update to 2.7.
* gnu/packages/cran.scm (r-sna): Update to 2.7.
2022-06-13 14:21:50 +02:00
Ricardo Wurmus d72d39eaaf
gnu: r-processx: Update to 3.6.0.
* gnu/packages/cran.scm (r-processx): Update to 3.6.0.
2022-06-13 14:21:49 +02:00
Ricardo Wurmus 18fd4e7d70
gnu: r-vcd: Update to 1.4-10.
* gnu/packages/cran.scm (r-vcd): Update to 1.4-10.
2022-06-13 14:21:49 +02:00
Ricardo Wurmus 9ccb6b4bee
gnu: r-ipred: Update to 0.9-13.
* gnu/packages/cran.scm (r-ipred): Update to 0.9-13.
2022-06-13 14:21:49 +02:00
Ricardo Wurmus 8221425e3e
gnu: r-progressr: Update to 0.10.1.
* gnu/packages/cran.scm (r-progressr): Update to 0.10.1.
2022-06-13 14:21:48 +02:00
Ricardo Wurmus 38dde27cb3
gnu: r-bdsmatrix: Update to 1.3-6.
* gnu/packages/cran.scm (r-bdsmatrix): Update to 1.3-6.
2022-06-13 14:21:48 +02:00
Ricardo Wurmus c992406b5a
gnu: r-sp: Update to 1.5-0.
* gnu/packages/cran.scm (r-sp): Update to 1.5-0.
2022-06-13 14:21:48 +02:00
Ricardo Wurmus 6ffd58142c
gnu: r-proxy: Update to 0.4-27.
* gnu/packages/cran.scm (r-proxy): Update to 0.4-27.
2022-06-13 14:21:47 +02:00
Ricardo Wurmus 65464d9027
gnu: r-restrserve: Update to 1.2.0.
* gnu/packages/cran.scm (r-restrserve): Update to 1.2.0.
2022-06-13 14:21:47 +02:00
Ricardo Wurmus ae4c1cb0b3
gnu: r-benchmarkme: Update to 1.0.8.
* gnu/packages/cran.scm (r-benchmarkme): Update to 1.0.8.
[propagated-inputs]: Add r-stringr.
2022-06-13 14:21:46 +02:00
Ricardo Wurmus 1917b1f63e
gnu: r-afpt: Update to 1.1.0.2.
* gnu/packages/cran.scm (r-afpt): Update to 1.1.0.2.
2022-06-13 14:21:46 +02:00
Ricardo Wurmus fce6aeba7e
gnu: r-nbpseq: Update to 0.3.1.
* gnu/packages/bioconductor.scm (r-nbpseq): Update to 0.3.1.
2022-06-13 14:21:46 +02:00
Ricardo Wurmus 37378829bc
gnu: r-restfulr: Update to 0.0.14.
* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.14.
2022-06-13 14:21:42 +02:00
Ricardo Wurmus 7846896156
gnu: Add js-mathjax-for-r-mathjaxr.
* gnu/packages/patches/mathjax-3.1.2-no-a11y.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/javascript.scm (js-mathjax-for-r-mathjaxr): New variable.
2022-06-13 12:43:31 +02:00
Lars-Dominik Braun 97ebfc8f5c
gnu: python-asyncssh: Update to 2.11.0.
* gnu/packages/ssh.scm (python-asyncssh)[version]: Update to 2.11.0.
[propagated-inputs]: Add python-typing-extensions.
[native-inputs]: Add python-fido2, python-aiofiles, netcat and
python-pytest.
[arguments]: Disable netcat autodetection. Replace 'check with call
to pytest.
2022-06-13 12:30:17 +02:00
Artyom V. Poptsov b40761ca9d
gnu: Add python-langcodes.
* gnu/packages/python-xyz.scm (python-langcodes): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-13 12:27:35 +02:00
terramorpha fcad622648
services: guix: Generalize extensions.
* gnu/services/base.scm (<guix-extension>): New record type.
(guix-extension-merge): New procedure.
(guix-service-type): Honor extensions.
* doc/guix.texi (Base Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-13 12:27:35 +02:00
Ludovic Courtès 8918ce6d16
gnu: racket: Avoid use of (ice-9 exceptions).
Fixes <https://issues.guix.gnu.org/54546>.
Reported by Giovanni Biscuolo <g@xelera.eu>
and Michael Chirillo <michael.a.chirillo@gmail.com>.

* gnu/packages/racket.scm (racket): Rewrite in terms of SRFI-34/35
instead of (ice-9 exceptions).
2022-06-13 12:27:34 +02:00
Guillaume Le Vaillant c318f4fcb1
gnu: txr: Update to 277.
* gnu/packages/lisp.scm (txr): Update to 277.
  [inputs]: Add zlib.
2022-06-13 11:06:57 +02:00
Ludovic Courtès 6aa457fed1
Merge branch 'staging' 2022-06-13 08:57:51 +02:00
Marius Bakke d4482e9a9e
gnu: ungoogled-chromium: Update to 102.0.5005.115-1.
* gnu/packages/chromium.scm (%chromium-version): Set to 102.0.5005.115.
(%ungoogled-revision): Set to 1.
(%ungoogled-origin, ungoogled-chromium): Update hash.
2022-06-13 00:44:12 +02:00
Marius Bakke bcd9866eb4
gnu: LLVM, Clang, LLD: Update to 14.0.5.
* gnu/packages/llvm.scm (llvm-14, clang-14, lld-14): Update to 14.0.5.
(%llvm-monorepo-hashes, %llvm-patches): Adjust accordingly.
2022-06-13 00:44:12 +02:00
Marius Bakke d3d00b1b4f
gnu: uBlock Origin: Update to 1.43.0.
* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.43.0.
2022-06-13 00:44:12 +02:00
Ricardo Wurmus 0006a9a83a
gnu: Add r-deconvr.
* gnu/packages/bioconductor.scm (r-deconvr): New variable.
2022-06-12 22:51:23 +02:00
Ricardo Wurmus eec1724ea6
gnu: Add r-rsq.
* gnu/packages/cran.scm (r-rsq): New variable.
2022-06-12 22:51:23 +02:00
Ludovic Courtès 622545de6c
Merge branch 'master' into staging 2022-06-12 22:49:47 +02:00
jgart 9c036f2dfb
gnu: Add emacs-corfu-doc-terminal.
* gnu/packages/emacs-xyz.scm (emacs-corfu-doc-terminal): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-06-12 13:19:24 +02:00
jgart a473d74ff1
gnu: Add emacs-corfu-terminal.
* gnu/packages/emacs-xyz.scm (emacs-corfu-terminal): New variable.

Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2022-06-12 13:19:23 +02:00
Efraim Flashner e22b55f0b9
gnu: llvm-14: Fix configure-flags for cross-compiling.
* gnu/packages/llvm.scm (llvm-14)[arguments]: Fix syntax error in
configure-flags when cross-compiling llvm.
2022-06-12 13:50:47 +03:00
Efraim Flashner 3cbef19a90
gnu: zig: Limit to 64bit systems.
* gnu/packages/zig.scm (zig)[supported-systems]: New field.
2022-06-12 13:50:47 +03:00
Ricardo Wurmus 541823b318
gnu: r-hdf5array: Update to 1.24.1.
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.1.
2022-06-12 11:16:30 +02:00
Ricardo Wurmus a12ec47cbd
gnu: r-universalmotif: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.14.1.
2022-06-12 11:16:30 +02:00
Ricardo Wurmus a76b657d93
gnu: r-rsubread: Update to 2.10.2.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.2.
2022-06-12 11:16:30 +02:00
Ricardo Wurmus 41435e0e1c
gnu: r-clusterprofiler: Update to 4.4.2.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.4.2.
2022-06-12 11:16:29 +02:00
Ricardo Wurmus 640b45d73c
gnu: r-monocle: Update to 2.24.1.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.24.1.
2022-06-12 11:16:29 +02:00
Ricardo Wurmus 8ed8c8b8da
gnu: r-chippeakanno: Update to 3.30.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.30.1.
2022-06-12 11:16:29 +02:00
Ricardo Wurmus 46aab4d33d
gnu: r-zellkonverter: Update to 1.6.2.
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.6.2.
2022-06-12 11:16:28 +02:00
Ricardo Wurmus 7a344aa9e2
gnu: r-keggrest: Update to 1.36.2.
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.36.2.
2022-06-12 11:16:28 +02:00
Ricardo Wurmus 1ecac84c73
gnu: r-genomicfeatures: Update to 1.48.3.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.48.3.
2022-06-12 11:16:28 +02:00
Ricardo Wurmus 15e26f97d9
gnu: r-biocparallel: Update to 1.30.3.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.30.3.
[propagated-inputs]: Add r-codetools.
2022-06-12 11:16:28 +02:00
Ricardo Wurmus f5899fe58b
gnu: r-deepsnv: Update to 1.42.1.
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.42.1.
2022-06-12 11:16:23 +02:00
Julien Lepiller 965d54e344
gnu: java-plexus-component-metadata: Fix package.
* gnu/packages/java.scm (java-plexus-component-metadata): Apply fix for
  newer jdom.
2022-06-12 09:07:17 +02:00
Ludovic Courtès 091eb323ba
Merge branch 'master' into staging 2022-06-08 14:53:16 +02:00
jgart via Guix-patches via 0c5299200f
gnu: Add emacs-pyimport.
* gnu/packages/emacs-xyz.scm (emacs-pyimport): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-08 00:14:41 +02:00
Stefan Reichör 7fbf02b854
gnu: Add emacs-toodoo.
* gnu/packages/emacs-xyz.scm (emacs-toodoo): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-08 00:09:04 +02:00
Thomas Albers 1ba8c74de3
gnu: Add emacs-opencl-mode.
* gnu/packages/emacs-xyz.scm (emacs-opencl-mode): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-08 00:02:53 +02:00
Ludovic Courtès 05fef7bfc6
gnu: timescaledb: Adjust test preparation to PostgreSQL 13.6.
The previous method of making a union with symlinks would work with 13.4
but not with 13.6, which has an extra 'canonicalize_path' call in
'find_my_exec'.

* gnu/packages/databases.scm (timescaledb)[arguments]: In
'prepare-tests', pass #:symlink argument to 'union-build'.
2022-06-07 23:58:16 +02:00
Ludovic Courtès b422687cbd
gnu: postgresql@10: Fix manual compilation.
This is a followup to f0227a18c2.

* gnu/packages/databases.scm (postgresql-10)[native-inputs]: New field.
2022-06-05 17:00:18 +02:00
Ludovic Courtès 5035be651a
gnu: docbook-sgml: Add 4.2.
* gnu/packages/docbook.scm (docbook-sgml-4.2, docbook-sgml-4.1): New
variables.
(docbook-sgml): Make an alias to 'docbook-sgml-4.1'.
2022-06-05 17:00:18 +02:00
Ludovic Courtès 5b6b4ade7c
gnu: go: Make 'make-go-std' memoizing.
* gnu/packages/golang.scm (make-go-std): Use 'mlambdaq'.
2022-06-05 17:00:18 +02:00
Ludovic Courtès fb21085d25
gnu: go-std: Make public.
* gnu/packages/golang.scm (go-std-1.14, go-std-1.16, go-std-1.17): New
variables.
2022-06-05 17:00:17 +02:00
Tobias Geerinckx-Rice 75eae3fd78
gnu: emacs-rainbow-mode: Update to 1.0.6.
* gnu/packages/emacs-xyz.scm (emacs-rainbow-mode): Update to 1.0.6.
2022-06-05 02:00:01 +02:00
Tobias Geerinckx-Rice 1dc22f19e8
gnu: emacs-undo-tree: Update to 0.8.2.
* gnu/packages/emacs-xyz.scm (emacs-undo-tree): Update to 0.8.2.
2022-06-05 02:00:01 +02:00
Tobias Geerinckx-Rice 4fc248ada2
gnu: emacs-ghub: Update to 3.5.6.
* gnu/packages/emacs-xyz.scm (emacs-ghub): Update to 3.5.6.
2022-06-05 02:00:01 +02:00
Tobias Geerinckx-Rice 9105c60f0d
gnu: putty: Update to 0.77.
* gnu/packages/networking.scm (putty): Update to 0.77.
[build-system]: Switch to CMAKE-BUILD-SYSTEM.
[arguments]: Remove the old 'chdir phase.  Add a custom 'check phase.
[native-inputs]: Add perl.
2022-06-05 02:00:00 +02:00
Tobias Geerinckx-Rice 66c5e40762
gnu: emacs-d-mode: Update to 2.0.12.
* gnu/packages/emacs-xyz.scm (emacs-d-mode): Update to 2.0.12.
2022-06-05 02:00:00 +02:00
Tobias Geerinckx-Rice 8578b8d8b5
gnu: openmpi: Update to 4.1.4.
* gnu/packages/mpi.scm (openmpi): Update to 4.1.4.
2022-06-05 02:00:00 +02:00
Jai Vetrivelan 5a42df6e49
gnu: Add emacs-xah-fly-keys.
* gnu/packages/emacs-xyz.scm (emacs-xah-fly-keys): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-07 21:55:39 +02:00
Aleksandr Vityazev 8e6228d499
gnu: emacs-plz: Update to 0.1.
* gnu/packages/emacs-xyz (emacs-plz): Update to 0.1.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-07 21:45:10 +02:00
Rostislav Svoboda 899c29805f
gnu: emacs-evil-collection: Update to 0.0.8.
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 0.0.8.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-07 21:40:29 +02:00
André A. Gomes c53a92ca2d
gnu: emacs-modus-themes: Update to 2.4.0.
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 2.4.0.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-07 21:38:27 +02:00
jgart via Guix-patches via 5f4946fac5
gnu: Add emacs-popon.
* gnu/packages/emacs-xyz.scm (emacs-popon): New variable.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2022-06-07 21:01:41 +02:00
derekchuank@outlook.com b42ed3b77c
gnu: Add xwhite.
* gnu/packages/xdisorg.scm (xwhite): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-07 18:29:13 +02:00
Foo Chuan Wei d78478758e
gnu: Add edlin.
* gnu/packages/text-editors.scm (edlin): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-07 18:29:13 +02:00
Felix Lechner 2c8c9403ae
gnu: nyacc: Update to 1.07.0.
* gnu/packages/mes.scm (nyacc): Update to 1.07.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-06-07 18:29:12 +02:00
Ludovic Courtès 71388e1fda
gnu: guile-fibers: Update to 1.1.1.
* gnu/packages/guile-xyz.scm (guile-fibers-1.1): Update to 1.1.1.
2022-06-07 18:29:12 +02:00
Efraim Flashner 413b85ad4f
gnu: Remove unused patch.
* gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch:
Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2022-06-07 19:11:48 +03:00
Vagrant Cascadian 96d47797dc
gnu: python-debian: Set version to build reproducibly.
* gnu/packages/python-xyz.scm (python-debian)[arguments]: Add 'set-version
  phase.
2022-06-07 08:42:41 -07:00
Maxim Cournoyer ceeb2bfcae
gnu: offlate: Fix build.
* gnu/packages/python-xyz.scm (offlate)
[phases]{patch-for-pygit2}: New phase.
2022-06-07 09:11:56 -04:00
Maxim Cournoyer e3d2650726
gnu: python-pygit2: Update to 1.9.2 and enable tests.
* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.9.2.
[tests?]: Delete argument.
[phases]{check}: New phase override.
[description]: Fix sentence.
2022-06-07 09:11:55 -04:00
Maxim Cournoyer 5125d005ed
gnu: python-pygmsh: Update to 7.1.17.
* gnu/packages/simulation.scm (python-pygmsh): Update to 7.1.17.
[source]: Remove snippet and modules fields.
[origin]: Prefix tag by "v".
[phases]: Delete trailing #t.
{workaround-gmsh-detection-failure}: New phase.
{build, install}: New phase overrides.
{check}: Honor tests and remove extraneous add-installed-pythonpath call.
[native-inputs]: Remove wheel.  Add python-pypa-build and python-flit-core.
[propagated-inputs]: Remove python-importlib-metadata.
2022-06-07 09:11:55 -04:00
Maxim Cournoyer 937094b75c
gnu: python-xunitparser: Update to 1.3.4.
* gnu/packages/python-check.scm (python-xunitparser): Update to 1.3.4.
2022-06-07 09:11:55 -04:00
Maxim Cournoyer 8b2ce33ee2
gnu: nikola: Update to 8.2.2.
* gnu/packages/python-xyz.scm (nikola): Update to 8.2.2.
2022-06-07 09:11:54 -04:00
Maxim Cournoyer f336f69f28
gnu: electron-cash: Apply new style to inputs and use gexps.
* gnu/packages/finance.scm (electron-cash)[phases]: Use gexps.
[inputs]: Use new style.
2022-06-07 09:11:54 -04:00
Maxim Cournoyer a7e985d3a3
gnu: electron-cash: Update to 4.2.10.
* gnu/packages/finance.scm (electron-cash): Update to 4.2.10.
2022-06-07 09:11:54 -04:00
Maxim Cournoyer da0839c77d
gnu: trezor-agent: Update to 0.14.4.
* gnu/packages/finance.scm (trezor-agent): Update to 0.14.4.
[phases]{relax-requirements}: New phase.
2022-06-07 09:11:54 -04:00
Maxim Cournoyer 036a464258
gnu: python-trezor: Add python-hidapi optional dependency.
* gnu/packages/finance.scm (python-trezor)
[propagated-inputs]: Add python-hidapi.
2022-06-07 09:11:54 -04:00
Maxim Cournoyer 4e92098e85
gnu: python-trezor-agent: Delete trailing #t and honor TESTS?.
* gnu/packages/finance.scm (python-trezor-agent)
[phases]: Delete trailing #t.
{check}: Honor TESTS?.  Delete extraneous add-installed-pythonpath call.
2022-06-07 09:11:53 -04:00
Maxim Cournoyer 08063e55ba
gnu: python-trezor: Update to 0.13.0.
* gnu/packages/finance.scm (python-trezor): Update to 0.13.0.
[source]: Delete broken symbolic links in snippet.
[propagated-inputs]: Use python-click-7.
[native-inputs]: Re-order.
2022-06-07 09:11:53 -04:00
Maxim Cournoyer 8df6117b78
gnu: python-flask-restx: Skip networking dependent test.
* gnu/packages/python-web.scm (python-flask-restx)
[phases]{check}: Skip the 'test_redirect' test.
2022-06-07 09:11:53 -04:00
Maxim Cournoyer 53a0e405ff
gnu: python-flask-combo-jsonapi: Skip failing test.
* gnu/packages/python-web.scm (python-flask-combo-jsonapi)
[phases]{check}: Skip
test_get_list_with_simple_filter_relationship_custom_qs_api test.
[native-inputs]: Normalize indentation.
2022-06-07 09:11:53 -04:00
Maxim Cournoyer 86a915433b
gnu: xenon: Update to 0.9.0, rename and relocate.
* gnu/packages/python-xyz.scm (python-xenon): Rename to...
* gnu/packages/code.scm (xenon): ... this.  Update to 0.9.0.
[native-inputs]: Delete field.
[inputs]: New field.
[phases]: Delete argument.
(python-xenon): Mark as deprecated.
2022-06-07 09:11:53 -04:00
Maxim Cournoyer 5022cf8e04
gnu: python-flake8: Update to 4.0.1.
* gnu/packages/python-xyz.scm (python-flake8): Update to 4.0.1.
[phases]{check}: Delete extraneous add-installed-pythonpath call.
[propagated-inputs]: Re-indent.
[native-inputs]: Remove python-mock.
2022-06-07 09:11:51 -04:00
Maxim Cournoyer f4696aeb94
gnu: Remove python-flake8-polyfill.
This package is mostly useful for Flake8 version 2 or 3 (see:
https://github.com/PyCQA/flake8-polyfill/pull/14#issuecomment-979161161).

* gnu/packages/python-xyz.scm (python-flake8-polyfill): Delete variable.
2022-06-07 09:11:20 -04:00
Maxim Cournoyer e05cac9080
gnu: python-pep8-naming: Update to 0.13.0.
* gnu/packages/python-xyz.scm (python-pep8-naming): Update to 0.13.0.
[propagated-inputs]: Remove python-flake8-polyfill.
2022-06-07 09:11:04 -04:00
Maxim Cournoyer e326552698
gnu: python-radon: Update to 5.1.0.
* gnu/packages/python-xyz.scm (python-radon): Update to 5.1.0.
[propagated-inputs]: Remove python-flake8-polyfill.
2022-06-07 09:11:03 -04:00
Josselin Poiret 0aa4311790
gnu: install: Add uvesafb service only on targets that support v86d.
Fixes <https://issues.guix.gnu.org/55806>.

* gnu/system/install.scm (%installation-services): Refactor into a
procedure, so that it can capture the system it's installing for.
Conditionally add uvesafb-service-type based on whether v86d is
supported by the target architecture.
(installation-os)[services]: Use the %installation-service procedure.
(uvesafb-shepherd-service): Remove %host-type checks.

Signed-off-by: Florian Pelz <pelzflorian@pelzflorian.de>
2022-06-07 11:49:18 +02:00
Efraim Flashner 478d2e4b02
gnu: python-flake8-polyfill: Update home-page.
* gnu/packages/python-xyz.scm (python-flake8-polyfill)[home-page]: Update
to new upstream URI.
2022-06-07 09:25:33 +03:00
Efraim Flashner 0fd5222ad6
gnu: python-flake8-polyfill: Honor tests? flag.
* gnu/packages/python-xyz.scm (python-flake8-polyfill)[arguments]:
Adjust custom 'check phase to honor the #:tests? flag.
2022-06-07 09:24:14 +03:00
Efraim Flashner 49a47bdcc5
gnu: python-flake8-polyfill: Fix building with python-flake8@4.
* gnu/packages/python-xyz.scm (python-flake8-polyfill)[source]: Add patch.
* gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Register it.
2022-06-07 09:22:35 +03:00
Petr Hodina 7e7c8b253c
gnu: python-flake8: Update to 4.0.1.
* gnu/packages/python-xyz.scm (python-flake8): Update to 4.0.1.
[source]: Remove snippet.
[arguments]: Respect tests?.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-06-07 09:14:04 +03:00