0413240e3d
gnu: Add rust-clap-3.
...
* gnu/packages/crates-io.scm (rust-clap-3): New variable.
(rust-clap-2): Inherit from above.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:56 +02:00
c0371bd0b2
gnu: Add rust-clap-derive-3.
...
* gnu/packages/crates-io.scm (rust-clap-derive-3): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:41 +02:00
d45b6d9d58
gnu: Add rust-strsim-0.10.
...
* gnu/packages/crates-io.scm (rust-strsim-0.10): New variable.
(rust-strsim-0.9): Inherit from above.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:28 +02:00
e881704787
gnu: Add rust-os-str-bytes-2.
...
* gnu/packages/crates-io.scm (rust-os-str-bytes-2): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:13:10 +02:00
754d009a76
gnu: Add rust-textwrap-0.12.
...
* gnu/packages/crates-io.scm (rust-textwrap-0.12): New variable.
(rust-textwrap-0.11): Inherit from above.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:56 +02:00
8de658d54a
gnu: Add rust-hyphenation-0.8.
...
* gnu/packages/crates-io.scm (rust-hyphenation-0.8): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:42 +02:00
510b9ff26f
gnu: Add rust-hyphenation-commons-0.8.
...
* gnu/packages/crates-io.scm (rust-hyphenation-commons-0.8): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:29 +02:00
12bdba7035
gnu: Add rust-ordered-float-2.
...
* gnu/packages/crates-io.scm (rust-ordered-float-2): New variable.
(rust-ordered-float-1): Inherit from above.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 15:12:08 +02:00
da08378aa4
gnu: emacs-shell-command+: Use Git repo instead of ELPA URL.
...
* emacs-xyz.scm (emacs-shell-command+)[source]: Use Git repository instead of
the unstable ELPA URL.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:49:00 +02:00
a866667f55
gnu: Add emacs-org-inline-pdf.
...
* gnu/packages/emacs-xyz.scm (emacs-org-inline-pdf): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:47:46 +02:00
bc251bc7e2
gnu: emacs-transient: Update to 0.3.4.
...
* gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.4.
[arguments]<#:phases>: Don’t return #t, this will be redundant once
core-updates gets merged.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:46:19 +02:00
a5c9843cfe
gnu: emacs-magit: Update to 3.0.0.
...
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.0.0.
[arguments]<#:phases>: Don’t return #t, this will be redundant once the
core-updates branch has been merged.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:45:57 +02:00
93a5505f12
gnu: emacs-forge: Update to 0.2.0.
...
* gnu/packages/emacs-xyz.scm (emacs-forge): Update to 0.2.0.
[arguments]<#:phases>: Don’t return #t at the end of phases, this will be
redundant once core-updates gets merged.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-26 14:44:19 +02:00
c5f7203e3e
gnu: minimap2: Install more files.
...
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Add modules.
Adjust custom 'install phase to also install library, headers and a
pkg-config file.
2021-05-26 15:22:10 +03:00
36a90d0637
gnu: minimap2: Update to 2.18.
...
* gnu/packages/bioinformatics.scm (minimap2): Update to 2.18.
[source]: Remove patch.
* gnu/packages/patches/minimap2-aarch64-support.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2021-05-26 15:22:10 +03:00
b085abbeb8
gnu: Add r-bayesfactor.
...
* gnu/packages/statistics.scm (r-bayesfactor): New variable.
2021-05-26 14:05:16 +02:00
3ea32f5bcf
gnu: Add r-effects.
...
* gnu/packages/statistics.scm (r-effects): New variable.
2021-05-26 14:05:16 +02:00
e53ecc6087
gnu: Add r-logspline.
...
* gnu/packages/statistics.scm (r-logspline): New variable.
2021-05-26 14:05:16 +02:00
6c7aafbedf
gnu: Add r-kknn.
...
* gnu/packages/statistics.scm (r-kknn): New variable.
2021-05-26 14:05:15 +02:00
fef452b13f
gnu: Add r-hypergeo.
...
* gnu/packages/cran.scm (r-hypergeo): New variable.
2021-05-26 14:05:15 +02:00
1af2da50bf
gnu: Add r-elliptic.
...
* gnu/packages/cran.scm (r-elliptic): New variable.
2021-05-26 14:05:15 +02:00
1ae67e6735
gnu: Add r-contfrac.
...
* gnu/packages/cran.scm (r-contfrac): New variable.
2021-05-26 14:05:15 +02:00
f921981536
gnu: Add r-decipher.
...
* gnu/packages/bioconductor.scm (r-decipher): New variable.
2021-05-26 13:31:20 +02:00
99873359ed
gnu: Add r-deepsnv.
...
* gnu/packages/bioconductor.scm (r-deepsnv): New variable.
2021-05-26 13:13:56 +02:00
834f649590
gnu: Add r-geneoverlap.
...
* gnu/packages/bioconductor.scm (r-geneoverlap): New variable.
2021-05-26 13:09:34 +02:00
3d704fafba
gnu: cuirass: Update to 1.0.0-20.524b81d.
...
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-20.524b81d.
2021-05-26 11:48:26 +02:00
63962f9b6c
gnu: Add minimodem.
...
* gnu/packages/radio.scm (minimodem): New variable.
2021-05-26 10:31:59 +02:00
94b8ad4490
gnu: Add r-chipseeker.
...
* gnu/packages/bioconductor.scm (r-chipseeker): New variable.
2021-05-26 10:21:32 +02:00
5aa68a9408
gnu: Add r-model4you.
...
* gnu/packages/cran.scm (r-model4you): New variable.
2021-05-26 10:00:51 +02:00
3f2a4b0980
gnu: Add r-pvclust.
...
* gnu/packages/cran.scm (r-pvclust): New variable.
2021-05-26 09:52:12 +02:00
9048e7f3b4
gnu: Add r-bsgenome-btaurus-ucsc-bostau8.
...
* gnu/packages/bioconductor.scm (r-bsgenome-btaurus-ucsc-bostau8): New
variable.
2021-05-26 09:42:01 +02:00
af163badb4
gnu: Add r-phantompeakqualtools.
...
* gnu/packages/bioinformatics.scm (r-phantompeakqualtools): New variable.
2021-05-26 09:34:37 +02:00
b1fee8a003
gnu: Add r-spp.
...
* gnu/packages/bioinformatics.scm (r-spp): New variable.
2021-05-26 09:29:01 +02:00
b84ead8c04
gnu: Add r-aneufinder.
...
* gnu/packages/bioconductor.scm (r-aneufinder): New variable.
2021-05-26 09:13:54 +02:00
189311660b
gnu: Add r-aneufinderdata.
...
* gnu/packages/bioconductor.scm (r-aneufinderdata): New variable.
2021-05-26 09:13:08 +02:00
458126a237
gnu: Add rsync 3.2.3.
...
* gnu/packages/rsync.scm (rsync-next): New variable.
2021-05-25 16:32:52 -04:00
d366557b7b
gnu: nginx: Update to 1.21.0 [fixes CVE-2021-23017].
...
* gnu/packages/web.scm (nginx, nginx-documentation): Update to 1.21.0.
2021-05-25 12:44:09 -04:00
0ffac75ece
gnu: qhull: Build position independent.
...
* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to build
code position independent.
2021-05-25 17:24:58 +03:00
d2a8b72b2f
gnu: cuirass: Update to 1.0.0-19.e1382f0.
...
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-19.e1382f0.
2021-05-25 15:15:56 +02:00
c942e17c29
gnu: qhull: Link binaries to shared library.
...
This drops the package size by nearly 60%.
* gnu/packages/maths.scm (qhull)[arguments]: Add configure-flag to link
binaries to shared library.
2021-05-25 15:50:57 +03:00
dc85100481
gnu: Add perl-set-intervaltree.
...
* gnu/packages/perl.scm (perl-set-intervaltree): New variable.
2021-05-25 14:31:06 +02:00
ac30a53c6a
gnu: Add perl-log-message-simple
...
* gnu/packages/perl.scm (perl-log-message-simple): New variable.
2021-05-25 14:20:07 +02:00
5bfb84b8cf
gnu: Add perl-log-message.
...
* gnu/packages/perl.scm (perl-log-message): New variable.
2021-05-25 14:19:09 +02:00
fe578ee51a
gnu: Add perl-extutils-manifest.
...
* gnu/packages/perl.scm (perl-extutils-manifest): New variable.
2021-05-25 14:08:34 +02:00
906cdbd4f9
gnu: Add perl-data-uuid.
...
* gnu/packages/perl.scm (perl-data-uuid): New variable.
2021-05-25 13:56:58 +02:00
414e41de64
gnu: cuirass: Update to 1.0.0-18.b1abb44.
...
* gnu/packages/ci.scm (cuirass): Update to 1.0.0-18.b1abb44.
2021-05-25 13:55:49 +02:00
bc13e79476
gnu: Add perl-const-fast.
...
* gnu/packages/perl.scm (perl-const-fast): New variable.
2021-05-25 13:50:26 +02:00
a154048d98
gnu: emacs-shell-command+: Update to 2.2.0.
...
* gnu/packages/emacs-xyz.scm (emacs-shell-command+): Update to 2.2.0.
2021-05-25 12:25:59 +02:00
a68cca64cd
gnu: Add kanatest.
...
* gnu/packages/education.scm (kanatest): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25 12:11:18 +02:00
a443181d7b
gnu: emacs-vertico: Update to 0.11.
...
* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.11.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2021-05-25 12:09:26 +02:00
Zheng Junjie
Xinglu Chen
Efraim Flashner
Lars-Dominik Braun
Roel Janssen
Mathieu Othacehe
Guillaume Le Vaillant
Leo Famulari
Nicolas Goaziou
nixo